AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0647960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0647960 MtrunA17_Chr4g0028241 76.026 463 22 3 1 374 1 463 0.0 665
Msa0647960 MtrunA17_Chr4g0028241 55.180 444 116 8 374 737 51 491 4.79e-152 451
Msa0647960 MtrunA17_Chr4g0028261 74.041 443 38 3 372 737 75 517 0.0 645
Msa0647960 MtrunA17_Chr4g0028261 51.380 471 128 9 1 374 23 489 8.47e-140 421
Msa0647960 MtrunA17_Chr4g0028271 67.865 445 65 4 374 741 56 499 0.0 600
Msa0647960 MtrunA17_Chr4g0028271 53.333 450 111 9 21 374 21 467 1.70e-144 432
Msa0647960 MtrunA17_Chr4g0028281 59.910 444 100 5 372 738 52 494 4.13e-179 521
Msa0647960 MtrunA17_Chr4g0028281 48.932 468 142 8 1 374 1 465 3.30e-133 403
Msa0647960 MtrunA17_Chr2g0327401 56.502 446 109 7 372 737 59 499 6.99e-166 488
Msa0647960 MtrunA17_Chr2g0327401 43.313 501 171 13 5 398 9 503 2.04e-119 368
Msa0647960 MtrunA17_Chr1g0171411 58.031 386 112 5 401 737 98 482 1.76e-148 442
Msa0647960 MtrunA17_Chr1g0171411 44.589 462 150 9 9 374 3 454 8.94e-111 345
Msa0647960 MtrunA17_Chr1g0199171 57.069 389 116 5 401 740 105 491 3.40e-148 442
Msa0647960 MtrunA17_Chr1g0199171 43.041 467 151 11 9 374 8 460 3.40e-108 338
Msa0647960 MtrunA17_Chr2g0327381 50.000 494 117 10 372 740 53 541 5.13e-147 441
Msa0647960 MtrunA17_Chr2g0327381 47.387 287 93 7 7 241 13 293 5.35e-70 239
Msa0647960 MtrunA17_Chr2g0327381 52.672 131 56 3 247 374 383 510 1.88e-31 129
Msa0647960 MtrunA17_Chr2g0327371 49.895 477 113 9 372 737 53 514 5.87e-141 424
Msa0647960 MtrunA17_Chr2g0327371 47.970 271 84 7 10 240 17 270 3.79e-63 219
Msa0647960 MtrunA17_Chr2g0327371 46.835 158 72 4 247 395 361 515 8.10e-35 139
Msa0647960 MtrunA17_Chr5g0447441 30.334 389 205 10 400 733 55 432 8.35e-46 170
Msa0647960 MtrunA17_Chr5g0447441 29.178 353 170 10 71 343 28 380 5.10e-33 133
Msa0647960 MtrunA17_Chr4g0044051 29.668 391 205 10 400 733 59 436 2.93e-43 162
Msa0647960 MtrunA17_Chr3g0118831 32.095 377 200 13 396 737 102 457 4.37e-42 159
Msa0647960 MtrunA17_Chr3g0118831 33.191 235 99 7 24 210 37 261 3.34e-22 100
Msa0647960 MtrunA17_Chr3g0118891 32.275 378 196 14 396 737 102 455 2.46e-40 154
Msa0647960 MtrunA17_Chr3g0118891 35.260 173 69 4 81 210 89 261 7.70e-21 96.3
Msa0647960 MtrunA17_Chr7g0249431 35.772 246 144 3 395 634 53 290 5.37e-38 148
Msa0647960 MtrunA17_Chr7g0249431 36.111 180 67 3 83 214 41 220 1.19e-22 102
Msa0647960 MtrunA17_Chr7g0234051 34.733 262 149 5 379 634 39 284 1.44e-37 147
Msa0647960 MtrunA17_Chr7g0234051 28.899 218 99 4 84 253 44 253 1.63e-19 92.4
Msa0647960 MtrunA17_Chr3g0118851 29.298 413 195 14 396 737 102 488 5.49e-37 145
Msa0647960 MtrunA17_Chr3g0118851 35.838 173 68 4 81 210 89 261 1.51e-20 95.9
Msa0647960 MtrunA17_Chr3g0118861 31.496 381 208 17 396 737 100 466 1.98e-36 143
Msa0647960 MtrunA17_Chr3g0090331 30.588 340 213 13 400 729 102 428 1.08e-35 141
Msa0647960 MtrunA17_Chr3g0090331 29.008 262 133 5 3 213 1 260 1.37e-21 99.0
Msa0647960 MtrunA17_Chr3g0094811 31.157 337 174 12 397 701 55 365 1.92e-35 140
Msa0647960 MtrunA17_Chr8g0338461 35.270 241 136 4 400 634 59 285 4.42e-35 139
Msa0647960 MtrunA17_Chr8g0338461 29.643 280 129 8 77 303 38 302 1.83e-22 101
Msa0647960 MtrunA17_Chr3g0118841 28.362 409 211 13 396 741 103 492 6.67e-35 139
Msa0647960 MtrunA17_Chr1g0153881 28.718 390 212 12 401 737 119 495 1.14e-34 139
Msa0647960 MtrunA17_Chr4g0068841 34.127 252 143 8 396 643 63 295 1.95e-34 137
Msa0647960 MtrunA17_Chr4g0020241 29.412 340 215 13 400 729 101 425 3.39e-34 137
Msa0647960 MtrunA17_Chr4g0020241 31.156 199 92 5 85 239 87 284 7.15e-18 87.4
Msa0647960 MtrunA17_Chr3g0118881 45.625 160 84 3 396 552 102 261 6.55e-34 136
Msa0647960 MtrunA17_Chr3g0118881 32.159 227 109 5 27 210 37 261 4.88e-21 97.4
Msa0647960 MtrunA17_Chr5g0431301 33.579 271 161 7 395 661 52 307 8.56e-34 135
Msa0647960 MtrunA17_Chr4g0068861 35.556 225 127 7 400 617 113 326 8.42e-33 132
Msa0647960 MtrunA17_Chr4g0068861 27.200 250 131 7 65 263 80 329 3.63e-20 94.4
Msa0647960 MtrunA17_Chr2g0309511 38.424 203 119 6 400 596 68 270 1.78e-32 131
Msa0647960 MtrunA17_Chr2g0309511 29.851 201 97 4 81 237 51 251 8.16e-19 90.1
Msa0647960 MtrunA17_Chr2g0304931 29.050 358 199 16 401 730 67 397 2.53e-32 131
Msa0647960 MtrunA17_Chr4g0009681 27.955 440 219 16 368 732 45 461 3.68e-32 130
Msa0647960 MtrunA17_Chr4g0047861 28.571 357 217 11 400 730 81 425 4.32e-32 130
Msa0647960 MtrunA17_Chr4g0047861 30.882 204 95 4 81 239 64 266 6.40e-22 100
Msa0647960 MtrunA17_Chr4g0038311 32.042 284 170 8 400 677 62 328 4.52e-32 130
Msa0647960 MtrunA17_Chr4g0038311 30.964 197 91 4 81 232 45 241 1.08e-18 89.7
Msa0647960 MtrunA17_Chr3g0131731 29.759 373 211 17 396 740 55 404 7.10e-32 129
Msa0647960 MtrunA17_Chr2g0309541 38.049 205 119 6 400 596 67 271 1.55e-31 129
Msa0647960 MtrunA17_Chr2g0309541 29.500 200 95 4 84 237 53 252 1.63e-18 89.4
Msa0647960 MtrunA17_Chr4g0009651 33.227 313 171 12 401 688 70 369 3.06e-31 128
Msa0647960 MtrunA17_Chr2g0318911 37.313 201 120 5 380 576 51 249 3.11e-31 128
Msa0647960 MtrunA17_Chr2g0318911 30.846 201 95 4 81 237 52 252 2.06e-20 95.1
Msa0647960 MtrunA17_Chr4g0009711 36.607 224 128 6 401 617 70 286 3.30e-31 127
Msa0647960 MtrunA17_Chr2g0285371 35.519 183 109 3 401 576 63 243 4.63e-31 127
Msa0647960 MtrunA17_Chr1g0199991 37.209 215 121 6 400 600 61 275 5.67e-31 127
Msa0647960 MtrunA17_Chr1g0199991 28.390 236 118 5 69 253 32 267 1.59e-19 92.4
Msa0647960 MtrunA17_Chr3g0093971 35.870 184 113 1 398 576 53 236 9.88e-31 126
Msa0647960 MtrunA17_Chr3g0093971 26.337 243 111 8 87 269 44 278 1.92e-17 85.9
Msa0647960 MtrunA17_Chr3g0133011 25.771 454 231 15 368 736 62 494 1.08e-30 126
Msa0647960 MtrunA17_Chr2g0285381 35.152 165 101 1 396 554 61 225 1.15e-30 126
Msa0647960 MtrunA17_Chr2g0309521 37.438 203 121 6 400 596 68 270 1.31e-30 126
Msa0647960 MtrunA17_Chr2g0309521 29.293 198 96 4 84 237 54 251 6.80e-18 87.4
Msa0647960 MtrunA17_Chr3g0126031 27.475 404 218 12 400 735 56 452 1.40e-30 125
Msa0647960 MtrunA17_Chr2g0281621 28.571 350 222 12 400 729 63 404 2.67e-30 125
Msa0647960 MtrunA17_Chr2g0281621 32.338 201 92 4 82 239 47 246 7.56e-22 99.8
Msa0647960 MtrunA17_Chr4g0009661 27.612 402 216 13 401 733 70 465 4.31e-30 124
Msa0647960 MtrunA17_Chr2g0285351 34.359 195 109 3 368 555 41 223 5.83e-30 124
Msa0647960 MtrunA17_Chr1g0153931 41.935 155 82 5 401 549 105 257 6.37e-30 119
Msa0647960 MtrunA17_Chr1g0165811 43.312 157 78 6 400 553 58 206 8.15e-30 119
Msa0647960 MtrunA17_Chr1g0153941 41.463 164 88 5 395 552 101 262 9.10e-30 124
Msa0647960 MtrunA17_Chr8g0385871 37.017 181 109 4 396 574 57 234 1.07e-29 123
Msa0647960 MtrunA17_Chr7g0221551 36.813 182 108 5 396 574 54 231 1.28e-29 123
Msa0647960 MtrunA17_Chr3g0126051 27.184 412 223 13 395 736 56 460 2.18e-29 122
Msa0647960 MtrunA17_Chr4g0009701 27.053 414 203 16 401 733 70 465 3.56e-29 122
Msa0647960 MtrunA17_Chr1g0199971 37.629 194 112 5 396 582 57 248 2.23e-28 119
Msa0647960 MtrunA17_Chr7g0234041 39.227 181 96 3 400 573 55 228 4.33e-28 118
Msa0647960 MtrunA17_Chr4g0009671 34.921 189 115 3 401 583 35 221 8.11e-28 117
Msa0647960 MtrunA17_Chr7g0219051 38.043 184 94 7 390 555 39 220 3.68e-27 115
Msa0647960 MtrunA17_Chr2g0279371 33.775 151 94 2 390 534 31 181 1.14e-25 104
Msa0647960 MtrunA17_Chr4g0009641 25.000 404 200 15 401 733 70 441 1.17e-22 101
Msa0647960 MtrunA17_Chr4g0009641 34.197 193 93 6 98 266 69 251 1.44e-18 89.4
Msa0647960 MtrunA17_Chr2g0281641 25.882 340 200 12 424 730 7 327 7.37e-21 95.5
Msa0647960 MtrunA17_Chr4g0027731 30.952 168 106 4 395 557 40 202 6.05e-17 84.3
Msa0647960 MtrunA17_Chr1g0204191 25.138 362 187 16 400 731 119 426 6.24e-15 78.2
Msa0647960 MtrunA17_Chr4g0009721 44.186 86 42 1 401 480 66 151 3.53e-14 75.5
Msa0647960 MtrunA17_Chr2g0320571 30.994 171 103 4 395 554 40 206 1.91e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0647960 AT3G45010.1 57.653 392 114 5 397 738 112 501 2.45e-155 461
Msa0647960 AT3G45010.1 43.789 475 158 11 4 374 3 472 5.82e-115 357
Msa0647960 AT3G10410.1 56.995 386 116 4 400 737 113 496 2.04e-153 456
Msa0647960 AT3G10410.1 43.284 469 161 11 6 374 5 468 1.32e-114 356
Msa0647960 AT5G22980.1 56.456 395 122 4 396 742 108 500 1.39e-148 443
Msa0647960 AT5G22980.1 43.226 465 160 9 10 374 7 467 3.85e-112 349
Msa0647960 AT5G22960.1 56.000 150 47 2 396 545 44 174 3.18e-48 169
Msa0647960 AT5G22960.1 45.270 148 58 4 78 203 28 174 1.94e-32 124
Msa0647960 AT1G15000.1 29.487 390 208 9 400 736 49 424 6.60e-44 164
Msa0647960 AT1G15000.1 28.655 342 162 10 80 343 31 368 1.29e-32 132
Msa0647960 AT1G73290.2 37.949 195 115 1 396 584 56 250 2.17e-41 154
Msa0647960 AT1G73290.2 31.308 214 91 4 87 252 49 254 9.93e-23 100
Msa0647960 AT1G73300.1 28.079 406 202 13 396 735 57 438 4.28e-41 156
Msa0647960 AT1G73300.1 26.801 347 147 10 87 338 50 384 9.58e-22 99.4
Msa0647960 AT1G73300.2 28.079 406 202 13 396 735 57 438 4.28e-41 156
Msa0647960 AT1G73300.2 26.801 347 147 10 87 338 50 384 9.58e-22 99.4
Msa0647960 AT1G73270.2 30.556 324 183 6 396 700 57 357 2.06e-40 154
Msa0647960 AT1G73270.2 24.928 349 151 8 87 338 50 384 3.99e-20 94.4
Msa0647960 AT1G73270.1 30.556 324 183 6 396 700 57 357 2.31e-40 154
Msa0647960 AT1G73270.1 24.928 349 151 8 87 338 50 384 3.77e-20 94.7
Msa0647960 AT1G73290.3 30.124 322 185 8 396 700 56 354 2.44e-40 153
Msa0647960 AT1G73290.3 31.308 214 91 4 87 252 49 254 6.37e-22 99.4
Msa0647960 AT3G25420.1 38.494 239 133 5 400 634 58 286 2.97e-40 155
Msa0647960 AT1G73290.1 30.124 322 185 8 396 700 56 354 3.40e-40 154
Msa0647960 AT1G73290.1 31.308 214 91 4 87 252 49 254 1.34e-21 99.0
Msa0647960 AT4G12910.2 37.344 241 131 6 400 634 63 289 3.97e-40 154
Msa0647960 AT4G12910.2 33.186 226 94 6 84 261 49 265 4.35e-25 109
Msa0647960 AT2G23010.2 30.351 313 202 6 396 700 49 353 6.29e-40 153
Msa0647960 AT2G23010.2 30.660 212 92 4 87 251 42 245 2.77e-21 97.8
Msa0647960 AT2G23010.1 30.351 313 202 6 396 700 49 353 6.60e-40 153
Msa0647960 AT2G23010.1 30.660 212 92 4 87 251 42 245 3.32e-21 97.8
Msa0647960 AT4G12910.1 33.779 299 180 6 400 689 63 352 7.14e-40 154
Msa0647960 AT4G12910.1 33.186 226 94 6 84 261 49 265 7.64e-25 109
Msa0647960 AT1G73280.2 30.864 324 182 8 396 700 57 357 1.68e-39 150
Msa0647960 AT1G73280.2 29.907 214 94 4 87 252 50 255 4.70e-19 90.5
Msa0647960 AT1G73280.1 28.974 390 219 14 396 735 57 438 1.80e-39 152
Msa0647960 AT1G73280.1 24.927 341 161 8 87 338 50 384 2.08e-20 95.1
Msa0647960 AT5G36180.1 27.612 402 209 13 396 735 57 438 5.59e-39 150
Msa0647960 AT5G36180.1 25.434 346 153 9 87 338 50 384 3.73e-19 91.3
Msa0647960 AT1G73310.1 27.848 395 217 12 396 735 57 438 9.28e-39 150
Msa0647960 AT1G73310.1 25.434 346 153 9 87 338 50 384 3.15e-20 94.7
Msa0647960 AT3G52020.1 30.500 400 200 14 400 734 107 493 9.68e-39 151
Msa0647960 AT3G52020.1 31.008 258 124 7 7 213 8 262 5.52e-21 97.8
Msa0647960 AT1G73310.2 39.572 187 107 1 396 576 57 243 5.85e-38 147
Msa0647960 AT1G73310.2 25.145 346 154 8 87 338 50 384 5.98e-20 93.6
Msa0647960 AT5G08260.1 37.751 249 132 9 396 639 64 294 6.15e-38 148
Msa0647960 AT5G08260.1 30.833 240 118 7 81 272 50 289 5.75e-21 97.4
Msa0647960 AT2G22980.2 31.944 288 165 8 396 669 50 320 6.50e-38 147
Msa0647960 AT2G22980.2 24.138 348 167 11 87 346 43 381 6.81e-19 90.1
Msa0647960 AT2G22920.4 39.487 195 110 3 396 583 49 242 6.70e-38 144
Msa0647960 AT2G22920.4 29.577 213 94 4 87 251 42 246 9.58e-21 94.4
Msa0647960 AT2G22980.1 31.944 288 165 8 396 669 50 320 8.64e-38 147
Msa0647960 AT2G22980.1 24.138 348 167 11 87 346 43 381 9.23e-19 90.1
Msa0647960 AT5G23210.3 41.799 189 105 4 400 583 79 267 9.55e-38 147
Msa0647960 AT5G23210.3 29.091 220 111 4 82 256 63 282 4.46e-21 97.4
Msa0647960 AT3G12203.2 31.707 287 167 9 401 672 1 273 1.06e-37 145
Msa0647960 AT3G12203.2 24.159 327 156 8 99 338 1 322 1.29e-22 101
Msa0647960 AT2G22980.4 31.944 288 165 8 396 669 50 320 1.25e-37 146
Msa0647960 AT2G22980.4 24.138 348 167 11 87 346 43 381 8.04e-19 90.5
Msa0647960 AT5G23210.1 29.904 418 202 17 400 733 79 489 1.66e-37 147
Msa0647960 AT5G23210.1 29.091 220 111 4 82 256 63 282 7.72e-21 97.1
Msa0647960 AT3G12203.3 31.615 291 170 9 397 672 34 310 1.91e-37 145
Msa0647960 AT3G12203.3 24.189 339 165 8 87 338 26 359 1.79e-23 104
Msa0647960 AT2G22920.1 30.599 317 194 9 396 700 49 351 2.15e-37 145
Msa0647960 AT2G22920.1 25.740 338 164 8 87 338 42 378 4.65e-23 102
Msa0647960 AT2G22920.2 27.569 399 217 13 396 736 49 433 2.38e-37 145
Msa0647960 AT2G22920.2 25.740 338 164 8 87 338 42 378 5.64e-23 103
Msa0647960 AT3G12203.1 31.615 291 170 9 397 672 55 331 2.40e-37 145
Msa0647960 AT3G12203.1 24.189 339 165 8 87 338 47 380 2.78e-23 103
Msa0647960 AT2G22970.2 32.867 286 154 9 396 663 49 314 3.32e-37 142
Msa0647960 AT2G22970.2 29.439 214 92 5 87 251 42 245 1.27e-18 88.2
Msa0647960 AT2G22970.4 30.341 323 185 10 396 700 49 349 3.71e-37 144
Msa0647960 AT2G22970.4 24.781 343 159 9 87 338 42 376 1.18e-19 92.8
Msa0647960 AT3G10450.3 35.897 195 119 1 396 584 10 204 4.97e-37 143
Msa0647960 AT3G10450.3 29.412 204 88 4 97 252 13 208 5.91e-19 90.1
Msa0647960 AT2G22970.1 30.341 323 185 10 396 700 49 349 5.63e-37 144
Msa0647960 AT2G22970.1 24.781 343 159 9 87 338 42 376 1.85e-19 92.4
Msa0647960 AT2G22970.3 30.341 323 185 10 396 700 49 349 7.01e-37 144
Msa0647960 AT2G22970.3 24.781 343 159 9 87 338 42 376 1.54e-19 92.8
Msa0647960 AT3G10450.2 35.897 195 119 1 396 584 10 204 8.23e-37 143
Msa0647960 AT3G10450.2 29.412 204 88 4 97 252 13 208 1.03e-18 89.7
Msa0647960 AT2G22980.3 31.724 290 165 9 396 669 50 322 1.10e-36 142
Msa0647960 AT2G22980.3 27.723 202 93 4 87 240 43 239 1.25e-17 85.9
Msa0647960 AT3G10450.4 35.897 195 119 1 396 584 53 247 1.33e-36 143
Msa0647960 AT3G10450.4 28.972 214 96 4 87 252 46 251 3.09e-19 91.3
Msa0647960 AT2G12480.4 29.262 393 207 11 396 735 55 429 2.12e-36 143
Msa0647960 AT2G12480.4 29.130 230 116 7 87 269 48 277 2.80e-18 88.6
Msa0647960 AT3G10450.1 35.897 195 119 1 396 584 53 247 2.24e-36 142
Msa0647960 AT3G10450.1 28.972 214 96 4 87 252 46 251 5.14e-19 90.9
Msa0647960 AT3G12240.1 31.410 312 186 10 401 700 57 352 4.84e-36 142
Msa0647960 AT3G12240.1 24.855 346 171 9 87 346 45 387 2.44e-19 92.0
Msa0647960 AT4G30810.1 44.654 159 85 3 400 555 66 224 6.61e-36 142
Msa0647960 AT4G30810.1 29.565 230 113 4 69 249 37 266 2.77e-23 104
Msa0647960 AT2G12480.1 28.646 384 219 9 396 735 55 427 6.65e-36 141
Msa0647960 AT2G12480.1 29.130 230 116 7 87 269 48 277 3.00e-18 88.6
Msa0647960 AT3G63470.1 31.014 345 205 13 400 729 109 435 6.78e-36 142
Msa0647960 AT3G52000.1 28.827 392 211 13 401 734 93 474 7.73e-36 142
Msa0647960 AT3G52000.1 25.382 327 150 8 87 322 81 404 2.51e-21 98.6
Msa0647960 AT2G12480.2 28.571 385 219 9 396 735 55 428 9.69e-36 141
Msa0647960 AT2G12480.2 29.130 230 116 7 87 269 48 277 2.89e-18 88.6
Msa0647960 AT3G17180.1 28.162 419 212 16 396 735 63 471 5.14e-35 139
Msa0647960 AT3G17180.1 28.448 232 104 7 71 248 31 254 3.38e-18 89.0
Msa0647960 AT3G12220.2 28.866 388 226 14 396 737 21 404 6.21e-35 138
Msa0647960 AT3G52010.1 27.735 393 218 11 401 734 94 479 6.30e-35 139
Msa0647960 AT3G52010.1 28.169 213 100 4 87 249 82 291 8.92e-17 84.3
Msa0647960 AT3G12230.1 29.310 348 200 11 368 700 35 351 7.33e-35 138
Msa0647960 AT1G33540.2 33.921 227 134 3 397 609 11 235 7.84e-35 138
Msa0647960 AT5G42240.1 32.472 271 164 7 395 660 55 311 9.40e-35 139
Msa0647960 AT5G42240.1 28.151 238 122 8 79 267 41 278 2.28e-18 89.4
Msa0647960 AT2G23000.1 37.968 187 109 2 396 576 49 234 1.06e-34 138
Msa0647960 AT2G23000.2 37.968 187 109 2 396 576 49 234 1.06e-34 138
Msa0647960 AT3G12220.1 27.907 387 231 13 396 737 51 434 1.16e-34 137
Msa0647960 AT1G33540.1 33.921 227 134 3 397 609 54 278 1.62e-34 138
Msa0647960 AT3G12220.3 32.932 249 150 5 396 628 51 298 2.45e-34 135
Msa0647960 AT3G12220.3 25.166 302 157 8 87 338 44 326 2.93e-20 94.0
Msa0647960 AT3G17180.2 40.217 184 105 5 396 574 63 246 3.66e-34 136
Msa0647960 AT3G17180.2 28.448 232 104 7 71 248 31 254 1.75e-18 89.4
Msa0647960 AT1G61130.1 31.845 336 197 15 400 712 59 385 1.11e-33 135
Msa0647960 AT1G61130.1 26.829 328 151 13 81 332 42 356 9.12e-21 96.7
Msa0647960 AT4G15100.1 41.146 192 104 7 400 584 72 261 1.16e-33 135
Msa0647960 AT4G15100.1 28.522 291 147 11 81 312 55 343 6.66e-24 106
Msa0647960 AT5G42230.1 30.508 295 176 7 400 691 56 324 1.89e-33 135
Msa0647960 AT5G42230.1 33.140 172 73 4 82 211 40 211 1.67e-17 86.7
Msa0647960 AT5G42230.2 30.508 295 176 7 400 691 56 324 1.89e-33 135
Msa0647960 AT5G42230.2 33.140 172 73 4 82 211 40 211 1.67e-17 86.7
Msa0647960 AT2G24010.1 28.856 402 208 15 400 735 58 447 2.62e-33 134
Msa0647960 AT2G24010.1 30.964 197 92 4 87 239 47 243 3.50e-17 85.5
Msa0647960 AT1G43780.1 28.401 419 212 14 395 736 60 467 3.91e-33 134
Msa0647960 AT2G35770.1 35.965 228 129 5 400 620 66 283 4.01e-33 134
Msa0647960 AT2G35770.1 23.907 389 202 9 69 364 37 424 1.19e-19 93.2
Msa0647960 AT2G12480.3 35.242 227 139 4 396 620 55 275 8.55e-33 133
Msa0647960 AT2G12480.3 29.130 230 116 7 87 269 48 277 3.05e-18 89.0
Msa0647960 AT2G22990.4 28.049 328 188 9 396 700 47 349 6.83e-32 129
Msa0647960 AT2G22990.1 28.049 328 188 9 396 700 47 349 8.81e-32 129
Msa0647960 AT5G09640.1 34.615 182 113 1 401 576 56 237 9.57e-32 129
Msa0647960 AT3G07990.1 35.616 219 127 6 396 600 58 276 1.08e-31 129
Msa0647960 AT3G07990.1 28.085 235 113 6 66 245 21 254 3.16e-19 91.7
Msa0647960 AT2G22990.3 28.049 328 188 9 396 700 47 349 1.39e-31 129
Msa0647960 AT1G28110.1 29.375 320 184 12 396 691 55 356 3.65e-31 128
Msa0647960 AT1G28110.2 29.375 320 184 12 396 691 55 356 3.65e-31 128
Msa0647960 AT2G24000.1 27.494 411 214 15 400 736 58 458 5.31e-31 127
Msa0647960 AT2G33530.1 41.509 159 86 5 396 551 57 211 1.76e-29 123
Msa0647960 AT4G30610.1 27.228 404 221 14 400 735 60 458 2.38e-29 122
Msa0647960 AT4G30610.1 29.703 202 98 4 82 239 44 245 7.43e-18 87.8
Msa0647960 AT2G24010.2 27.578 417 209 16 400 735 58 462 4.63e-29 122
Msa0647960 AT2G24010.2 28.302 212 93 5 87 239 47 258 4.32e-13 72.8
Msa0647960 AT3G56540.1 44.444 126 68 2 400 523 107 232 1.09e-28 116
Msa0647960 AT3G56540.1 30.070 143 58 2 81 181 90 232 8.57e-16 78.6
Msa0647960 AT2G05850.1 26.316 399 217 13 401 734 93 479 1.79e-28 120
Msa0647960 AT5G23210.5 28.680 394 190 17 424 733 8 394 2.06e-28 119
Msa0647960 AT5G23210.5 36.275 102 64 1 156 256 86 187 6.25e-12 68.6
Msa0647960 AT1G11080.1 35.371 229 134 7 400 619 78 301 2.18e-28 120
Msa0647960 AT1G11080.1 31.553 206 94 4 81 239 61 266 1.89e-20 95.9
Msa0647960 AT1G11080.2 35.371 229 134 7 400 619 78 301 2.33e-28 120
Msa0647960 AT1G11080.2 31.553 206 94 4 81 239 61 266 2.32e-20 95.5
Msa0647960 AT5G23210.4 40.244 164 93 4 425 583 8 171 6.58e-28 116
Msa0647960 AT5G23210.4 36.275 102 64 1 156 256 85 186 4.20e-12 68.9
Msa0647960 AT5G23210.2 28.499 393 190 17 425 733 8 393 9.89e-28 116
Msa0647960 AT5G23210.2 36.275 102 64 1 156 256 85 186 6.38e-12 68.6
Msa0647960 AT2G35780.1 37.222 180 104 5 400 574 58 233 2.27e-27 116
Msa0647960 AT2G24010.4 37.255 204 107 6 400 583 29 231 3.31e-27 114
Msa0647960 AT2G24010.4 28.302 212 93 5 87 239 18 229 2.20e-13 72.8
Msa0647960 AT3G02110.1 40.881 159 90 4 400 555 65 222 4.00e-27 116
Msa0647960 AT2G22990.5 26.524 328 184 10 396 700 47 340 2.85e-25 109
Msa0647960 AT2G24010.3 40.588 170 80 6 400 549 29 197 3.86e-24 107
Msa0647960 AT1G73280.4 25.073 343 185 11 447 735 12 336 5.20e-23 101
Msa0647960 AT5G36180.2 27.881 269 154 8 447 700 12 255 1.73e-22 99.8
Msa0647960 AT5G36180.5 25.217 345 182 12 447 735 12 336 1.88e-22 99.8
Msa0647960 AT5G36180.3 25.217 345 182 12 447 735 12 336 1.88e-22 99.8
Msa0647960 AT5G36180.4 27.881 269 154 8 447 700 12 255 3.83e-22 99.0
Msa0647960 AT1G73310.3 38.462 130 80 0 447 576 12 141 9.67e-22 97.4
Msa0647960 AT2G22980.5 29.224 219 130 7 459 669 2 203 6.39e-19 88.6
Msa0647960 AT1G73280.3 24.012 329 178 11 461 735 1 311 1.04e-18 88.2
Msa0647960 AT2G22990.6 24.809 262 149 9 459 700 2 235 1.04e-16 82.4
Msa0647960 AT2G22990.2 24.809 262 149 9 459 700 2 235 1.23e-16 82.0
Msa0647960 AT2G27920.1 29.240 171 107 7 395 557 41 205 6.52e-13 72.0
Msa0647960 AT2G24000.2 34.127 126 58 4 87 209 47 150 2.49e-12 70.1

Find 161 sgRNAs with CRISPR-Local

Find 893 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTGTTTGGAATGATTT+TGG 0.122766 4_3:+54306340 Msa0647960:CDS
CTTCTTCTCGACGATCTTTC+CGG 0.151953 4_3:-54316371 None:intergenic
TTTGGTCAGGGAATTATAAT+TGG 0.176880 4_3:+54309722 Msa0647960:intron
TATCTGTTGACATTGATTTA+AGG 0.193923 4_3:-54318286 None:intergenic
TATGCTGGGTACTGAATTTC+AGG 0.194525 4_3:-54317858 None:intergenic
TGAATTCTTTAAACTGCTTT+TGG 0.209258 4_3:-54309768 None:intergenic
GGTTGATGGTATTGATATTA+AGG 0.256508 4_3:+54309807 Msa0647960:CDS
TTGCCATGTATTAGATTAAC+TGG 0.259146 4_3:-54305292 None:intergenic
CAAAAGAGACATAGAGGTTT+TGG 0.259294 4_3:-54305146 None:intergenic
CCGATGACTTGTCTCTTGTT+TGG 0.289000 4_3:+54306329 Msa0647960:CDS
AAGAATGACTTCTATATTAC+TGG 0.289799 4_3:+54317599 Msa0647960:CDS
CATGAAGTTAGGGGTATTAT+AGG 0.306217 4_3:+54308900 Msa0647960:CDS
ATTAGATTAACTGGATCCTT+TGG 0.311202 4_3:-54305283 None:intergenic
TTCTTCTCTACAATCTTTCC+AGG 0.313177 4_3:-54305334 None:intergenic
TTCTTCTCGACGATCTTTCC+GGG 0.319060 4_3:-54316370 None:intergenic
CACTTCAGATGTTGGCAAAC+TGG 0.324425 4_3:+54319462 Msa0647960:CDS
AGCTAGTTCACTGCCGCAAC+CGG 0.326569 4_3:-54306275 None:intergenic
TTTGATGAAAAGCTTTCATT+TGG 0.327846 4_3:+54308980 Msa0647960:CDS
CCTCCAAATATCATACAAAA+AGG 0.331556 4_3:-54319603 None:intergenic
CTTGGGCAGGGAATTCGAAT+TGG 0.338491 4_3:+54319174 Msa0647960:intron
CTGATGATTTGTCTCTTGTA+TGG 0.339960 4_3:+54317183 Msa0647960:CDS
GCAGGAATGTTGTATACCTT+TGG 0.341391 4_3:+54309832 Msa0647960:CDS
CTATAATACCCCTAACTTCA+TGG 0.345293 4_3:-54308899 None:intergenic
TTAGATTAACTGGATCCTTT+GGG 0.345406 4_3:-54305282 None:intergenic
TTCTAAATGACCATGAAGTT+AGG 0.347641 4_3:+54308889 Msa0647960:CDS
ATCCCATCCTCAAGAAGTTC+AGG 0.351366 4_3:-54318627 None:intergenic
AAGACAGTTAAGGATGCTTT+AGG 0.354639 4_3:+54318516 Msa0647960:CDS
ATGTTCCTGCTCTTGCCTCT+AGG 0.366427 4_3:+54317642 Msa0647960:CDS
GAAAATCTCAATCACCATTT+CGG 0.370028 4_3:+54305388 Msa0647960:CDS
TCTCTTGTATGGAATGACTA+TGG 0.371218 4_3:+54317194 Msa0647960:CDS
TTAAGGATGCTTTAGGTGTT+GGG 0.372057 4_3:+54318523 Msa0647960:CDS
CCAGTCAACCATATCACAAC+TGG 0.373577 4_3:-54306247 None:intergenic
CCAGTCAACCATATCACAAC+TGG 0.373577 4_3:-54317101 None:intergenic
ATCAAAGTTCTTATATATGC+TGG 0.387733 4_3:+54309029 Msa0647960:CDS
CGAATTCATCAAGAAAATAA+AGG 0.391733 4_3:+54308095 Msa0647960:CDS
TCTAGACATGATTGAATCAA+TGG 0.398819 4_3:-54319527 None:intergenic
CAATAACAGGGTATTGCTAT+TGG 0.400508 4_3:+54308303 Msa0647960:intron
TGATTTGTACGATTTCTTGC+AGG 0.401077 4_3:+54317444 Msa0647960:CDS
TGTTCCTGCTCTTGCCTCTA+GGG 0.405297 4_3:+54317643 Msa0647960:CDS
GTTAGTTTCTTACAGTGGTC+AGG 0.415177 4_3:+54309745 Msa0647960:CDS
AACATCTGAAGTGCAGCTTT+TGG 0.416607 4_3:-54319452 None:intergenic
GGATGCAAGGGAACCTCAAC+GGG 0.418686 4_3:+54319483 Msa0647960:CDS
CAGGAATGTTGTATACCTTT+GGG 0.420201 4_3:+54309833 Msa0647960:CDS
TCTAAATGACCATGAAGTTA+GGG 0.428382 4_3:+54308890 Msa0647960:CDS
GGTGAATGGGGCAGGACATA+TGG 0.430010 4_3:+54319415 Msa0647960:intron
TTGGGCAGGGAATTCGAATT+GGG 0.430028 4_3:+54319175 Msa0647960:intron
TTGGTCAGGGAATTATAATT+GGG 0.430085 4_3:+54309723 Msa0647960:intron
TGACATTAGAAAGAAATGTA+TGG 0.439067 4_3:+54308830 Msa0647960:intron
GATTACATCGGAACAAAGAA+AGG 0.443488 4_3:+54308392 Msa0647960:CDS
TTGATGAAAAGCTTTCATTT+GGG 0.447265 4_3:+54308981 Msa0647960:CDS
ATCACAACTGGGTCATCCTT+AGG 0.450323 4_3:-54306235 None:intergenic
GTTAAGGATGCTTTAGGTGT+TGG 0.452024 4_3:+54318522 Msa0647960:CDS
TTGACTGGAGGTCCCGGTTG+CGG 0.453659 4_3:+54306262 Msa0647960:CDS
AGGAAAGTACACAATAATGT+TGG 0.457881 4_3:-54319583 None:intergenic
CAGGGTATTGCTATTGGTAA+TGG 0.459509 4_3:+54308309 Msa0647960:intron
AATGCAAACTGTGTGTATGC+TGG 0.461223 4_3:-54317873 None:intergenic
AGGATGCCCCAGTTGTGATA+TGG 0.462648 4_3:+54317093 Msa0647960:CDS
GGTATTGATATTAAGGAAGC+AGG 0.467925 4_3:+54309814 Msa0647960:CDS
ATTCCTGAACTTCTTGAGGA+TGG 0.476157 4_3:+54318624 Msa0647960:CDS
GTTGGGATCACATAAGTTAG+AGG 0.476308 4_3:-54319565 None:intergenic
GGAAAGTACACAATAATGTT+GGG 0.479527 4_3:-54319582 None:intergenic
GATATTCCACATGATGAAAC+TGG 0.479658 4_3:+54317412 Msa0647960:CDS
TTGTGGCTTCTACACACTGT+GGG 0.481390 4_3:-54317947 None:intergenic
TGAATTCGGGATGCAAGAGC+TGG 0.481484 4_3:-54308080 None:intergenic
TCAAAGTTCTTATATATGCT+GGG 0.482690 4_3:+54309030 Msa0647960:CDS
TAGCTAAAACCTGTCCCAAT+TGG 0.485865 4_3:-54317373 None:intergenic
TATGAACAAGAAGACAGTTA+AGG 0.493655 4_3:+54318506 Msa0647960:CDS
GGCAGGACATATGGTCCCTA+TGG 0.494483 4_3:+54319424 Msa0647960:CDS
TTCGAATTGGGTTCATGCAA+TGG 0.497977 4_3:+54319187 Msa0647960:CDS
TGAGATTTATAATAATCCCT+TGG 0.498771 4_3:-54317688 None:intergenic
AAGTCATTCTTAAGAAACTC+AGG 0.499075 4_3:-54308020 None:intergenic
AGGATGACCCAGTTGTGATA+TGG 0.499398 4_3:+54306239 Msa0647960:CDS
TTTAGGTTACCTTGCACCTA+GGG 0.505049 4_3:-54305431 None:intergenic
TGATATTCCTGAACTTCTTG+AGG 0.505842 4_3:+54318620 Msa0647960:CDS
GTCGACCAACCAATTGGGAC+AGG 0.505995 4_3:+54317364 Msa0647960:CDS
GAGTAGTGTATGATGCTATG+AGG 0.508238 4_3:+54308952 Msa0647960:CDS
TATTCGATTCCTCGTGCCCT+AGG 0.509644 4_3:+54305415 Msa0647960:CDS
AGGGATTATTATAAATCTCA+AGG 0.513299 4_3:+54317691 Msa0647960:CDS
GAATCGAATAGTATCCGAAA+TGG 0.513973 4_3:-54305402 None:intergenic
TTCCTGAACTTCTTGAGGAT+GGG 0.514168 4_3:+54318625 Msa0647960:CDS
GTGATGTGTAACAGGTGAAT+GGG 0.514606 4_3:+54319402 Msa0647960:intron
ACTGATATCTTGTCCTATGC+TGG 0.518054 4_3:+54318312 Msa0647960:CDS
GGGTATTCCTCCACTACTTG+AGG 0.521517 4_3:+54309001 Msa0647960:CDS
ATATGGTTGACTGGAGGTCC+AGG 0.522115 4_3:+54317110 Msa0647960:CDS
AAATCATCAGCAATATGAAA+AGG 0.524457 4_3:-54317170 None:intergenic
GACATTAGAAAGAAATGTAT+GGG 0.525124 4_3:+54308831 Msa0647960:intron
AAGTCATCGGCAATATGAAA+AGG 0.531292 4_3:-54306316 None:intergenic
TGATTATCAGAGAGTGAAGG+TGG 0.532431 4_3:+54318246 Msa0647960:intron
GCTAGTTCACTGCTGCAACC+TGG 0.533445 4_3:-54317128 None:intergenic
GTTCATGCAATGGAGTGGTC+AGG 0.534861 4_3:+54319197 Msa0647960:CDS
AAAAGCTGCACTTCAGATGT+TGG 0.535873 4_3:+54319454 Msa0647960:CDS
GGTACGAGAAGTTGCATATG+AGG 0.542559 4_3:-54305191 None:intergenic
TGTGATGTGTAACAGGTGAA+TGG 0.544527 4_3:+54319401 Msa0647960:intron
TAAGGATGCTTTAGGTGTTG+GGG 0.544837 4_3:+54318524 Msa0647960:CDS
GTGTTATGATTTCTCAAATG+TGG 0.547777 4_3:+54318476 Msa0647960:CDS
CCAGTTGTGATATGGTTGAC+TGG 0.551036 4_3:+54317101 Msa0647960:CDS
ATTACTGGAGAATCATATGC+TGG 0.551568 4_3:+54317614 Msa0647960:CDS
AAGCAGTTTAAAGAATTCAA+AGG 0.556618 4_3:+54309772 Msa0647960:CDS
CAAAGATGTGCATAATGCTA+TGG 0.556648 4_3:+54318569 Msa0647960:CDS
ATGCTGGGTACTGAATTTCA+GGG 0.558271 4_3:-54317857 None:intergenic
ATTAAATGCTTGTCCCGTTG+AGG 0.558538 4_3:-54319496 None:intergenic
ATGTTGGCAAACTGGATGCA+AGG 0.558997 4_3:+54319470 Msa0647960:CDS
TTGTATGGAATGACTATGGT+TGG 0.560303 4_3:+54317198 Msa0647960:CDS
TGTATGGAATGACTATGGTT+GGG 0.561772 4_3:+54317199 Msa0647960:CDS
GGATAATCATTTGATTACAT+CGG 0.566242 4_3:+54308380 Msa0647960:CDS
AGTAGTGTATGATGCTATGA+GGG 0.570102 4_3:+54308953 Msa0647960:CDS
ATATGGTTGACTGGAGGTCC+CGG 0.571630 4_3:+54306256 Msa0647960:CDS
GACATAAGAAAGAAATGTCA+AGG 0.574476 4_3:+54318447 Msa0647960:CDS
CAGTCAACCATATCACAACT+GGG 0.574498 4_3:-54317100 None:intergenic
CCAGTTGTGATATGGTTGAC+TGG 0.575180 4_3:+54306247 Msa0647960:CDS
GAATCAGTTAATGTAATACA+TGG 0.579216 4_3:+54316322 Msa0647960:CDS
GATCCAGTTAATCTAATACA+TGG 0.579350 4_3:+54305289 Msa0647960:CDS
TGGGTACTGAATTTCAGGGT+TGG 0.580553 4_3:-54317853 None:intergenic
ATTAATGTCATCGCCAGCAT+AGG 0.581713 4_3:-54318325 None:intergenic
TAGATTAACTGGATCCTTTG+GGG 0.582283 4_3:-54305281 None:intergenic
AAGCTTTAACTTGTCCCCAA+AGG 0.584414 4_3:+54305267 Msa0647960:CDS
AGATAACAAATTGATTACAA+AGG 0.585454 4_3:+54317896 Msa0647960:CDS
GCTAGTTCACTGCCGCAACC+GGG 0.587772 4_3:-54306274 None:intergenic
CTAACACCAGTTTCATCATG+TGG 0.588201 4_3:-54317418 None:intergenic
TCGATGATGAATTGTACGAA+GGG 0.589876 4_3:+54308418 Msa0647960:CDS
GTGTAACAGGTGAATGGGGC+AGG 0.590576 4_3:+54319407 Msa0647960:intron
TTGATACCATCCTCAAGTAG+TGG 0.591817 4_3:-54309011 None:intergenic
GAATGACTATGGTTGGGACC+AGG 0.592522 4_3:+54317205 Msa0647960:CDS
TAAAACCTGTCCCAATTGGT+TGG 0.592919 4_3:-54317369 None:intergenic
ATGCAAACTGTGTGTATGCT+GGG 0.594157 4_3:-54317872 None:intergenic
TTCCTCGTGCCCTAGGTGCA+AGG 0.595001 4_3:+54305422 Msa0647960:CDS
TGAACCCTAGAGGCAAGAGC+AGG 0.596168 4_3:-54317647 None:intergenic
TGGATGCAAGGGAACCTCAA+CGG 0.601130 4_3:+54319482 Msa0647960:CDS
CAACAACAAAAGAGACATAG+AGG 0.601563 4_3:-54305152 None:intergenic
GTTTCCTTTGTGAACCCTAG+AGG 0.604626 4_3:-54317657 None:intergenic
TCTTCTCTACAATCTTTCCA+GGG 0.604984 4_3:-54305333 None:intergenic
AAGGAAACAAAGACAACCAA+GGG 0.606541 4_3:+54317672 Msa0647960:CDS
ATTGGGTTAGTTTCTTACAG+TGG 0.611417 4_3:+54309740 Msa0647960:CDS
AGTCATTCTTAAGAAACTCA+GGG 0.612833 4_3:-54308019 None:intergenic
ATAATGCTATGGTACAAGAT+TGG 0.620795 4_3:+54318580 Msa0647960:CDS
TGAATCACGAGACACTCCTA+AGG 0.622816 4_3:+54306219 Msa0647960:CDS
CAAAGTTCTTATATATGCTG+GGG 0.623883 4_3:+54309031 Msa0647960:CDS
ATTCCTCCACTACTTGAGGA+TGG 0.626042 4_3:+54309005 Msa0647960:CDS
TGTTGGCAAACTGGATGCAA+GGG 0.627339 4_3:+54319471 Msa0647960:CDS
ATCGATGATGAATTGTACGA+AGG 0.630166 4_3:+54308417 Msa0647960:CDS
CAGTCAACCATATCACAACT+GGG 0.631977 4_3:-54306246 None:intergenic
TACCTTGCACCTAGGGCACG+AGG 0.632347 4_3:-54305424 None:intergenic
CTAAATGACCATGAAGTTAG+GGG 0.639235 4_3:+54308891 Msa0647960:CDS
ATACCATCCTCAAGTAGTGG+AGG 0.641070 4_3:-54309008 None:intergenic
TAGAAAATAGAGAGGCCCAA+AGG 0.643077 4_3:-54309848 None:intergenic
CCAAACAAGAGACAAGTCAT+CGG 0.646924 4_3:-54306329 None:intergenic
AATCTGTTGATTATTATGTG+TGG 0.654034 4_3:-54305212 None:intergenic
TAAACCTTTAGAAAATAGAG+AGG 0.655800 4_3:-54309856 None:intergenic
TCTTCTCGACGATCTTTCCG+GGG 0.657303 4_3:-54316369 None:intergenic
ATTGGGTTCATGCAATGGAG+TGG 0.661266 4_3:+54319192 Msa0647960:CDS
AAAGGAAACAAAGACAACCA+AGG 0.674694 4_3:+54317671 Msa0647960:CDS
GTTTGATTATCAGAGAGTGA+AGG 0.682005 4_3:+54318243 Msa0647960:intron
TTTGTGGCTTCTACACACTG+TGG 0.684763 4_3:-54317948 None:intergenic
ATTACTGGAGAATCATACGC+AGG 0.691650 4_3:+54308047 Msa0647960:CDS
TTTGAGAAATCATAACACAA+TGG 0.691845 4_3:-54318471 None:intergenic
TGATGTGTAACAGGTGAATG+GGG 0.699009 4_3:+54319403 Msa0647960:intron
GTAGAAGCCACAAAATCTTG+CGG 0.701020 4_3:+54317957 Msa0647960:CDS
GTTGTGATATGGTTGACTGG+AGG 0.703410 4_3:+54306250 Msa0647960:CDS
GTTGTGATATGGTTGACTGG+AGG 0.703410 4_3:+54317104 Msa0647960:CDS
CTTGCCTCTAGGGTTCACAA+AGG 0.748577 4_3:+54317653 Msa0647960:CDS
AGTCAACCATATCACAACTG+GGG 0.752820 4_3:-54317099 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTTTGTATTTTAAAGA+AGG + chr4_3:54306516-54306535 Msa0647960:intron 10.0%
!! TCAAAAAAAATTTCAAAAAA+TGG - chr4_3:54307750-54307769 None:intergenic 10.0%
!! AAAAAAAACAAAAATAACTA+TGG - chr4_3:54307972-54307991 None:intergenic 10.0%
!! AATTGTAATATAAAATTGTT+AGG - chr4_3:54308163-54308182 None:intergenic 10.0%
!!! TACTTTTTTTTTTTTTGAAT+CGG + chr4_3:54308487-54308506 Msa0647960:intron 10.0%
!!! AAACCAAATTATTTTAAAAT+TGG + chr4_3:54309096-54309115 Msa0647960:intron 10.0%
!! TAAAAAAAGAAAGATTATTA+CGG - chr4_3:54309248-54309267 None:intergenic 10.0%
!! TTTACTTTATGTATAATATT+TGG + chr4_3:54310146-54310165 Msa0647960:intron 10.0%
!! AAAAATACAATTGTAATAAT+TGG - chr4_3:54310492-54310511 None:intergenic 10.0%
!! TTCATACTATTAATAATTAA+AGG - chr4_3:54313579-54313598 None:intergenic 10.0%
!! AAAATTGAAAAATATGTATT+TGG + chr4_3:54314677-54314696 Msa0647960:intron 10.0%
!!! TTTTTTTTCTTTTTCTTTTA+TGG + chr4_3:54315268-54315287 Msa0647960:intron 10.0%
!!! AAAAAGAATTCAATTTATTT+TGG - chr4_3:54315364-54315383 None:intergenic 10.0%
!! TATCTATATATTAACTATAT+TGG - chr4_3:54315801-54315820 None:intergenic 10.0%
!! TTAATATTCTTATTGTAATT+TGG + chr4_3:54316491-54316510 Msa0647960:intron 10.0%
!! TAATATTCTTATTGTAATTT+GGG + chr4_3:54316492-54316511 Msa0647960:intron 10.0%
!! TTATAAAATCAAATGTTATT+TGG + chr4_3:54316744-54316763 Msa0647960:intron 10.0%
!!! ATATTAACAATTTTTTTATG+AGG - chr4_3:54318928-54318947 None:intergenic 10.0%
!! TTCATTAGTATTACTAAAAA+AGG - chr4_3:54305365-54305384 None:intergenic 15.0%
!!! TTTTAACAACTCTTTAAAAA+TGG - chr4_3:54305737-54305756 None:intergenic 15.0%
!! ATTTGTCTATACTAAAATTT+AGG - chr4_3:54305792-54305811 None:intergenic 15.0%
!! TATAAGAAAATAAAAGTTTG+TGG + chr4_3:54305950-54305969 Msa0647960:intron 15.0%
!!! TGAATGCATATTTTAATAAT+GGG - chr4_3:54306012-54306031 None:intergenic 15.0%
!!! TTGAATGCATATTTTAATAA+TGG - chr4_3:54306013-54306032 None:intergenic 15.0%
!! AAAATAGTTCAAAATTATGA+CGG - chr4_3:54306126-54306145 None:intergenic 15.0%
!!! AAAATGAGAAAAAACAATTT+TGG - chr4_3:54306587-54306606 None:intergenic 15.0%
!! TGGTTATTATATATGAATAA+TGG - chr4_3:54308764-54308783 None:intergenic 15.0%
!! TTTATTAAACTCTATAAACA+TGG - chr4_3:54308784-54308803 None:intergenic 15.0%
!!! AATTTGATTTTATATGCAAT+TGG + chr4_3:54309054-54309073 Msa0647960:CDS 15.0%
!!! TTGCCAATTTTAAAATAATT+TGG - chr4_3:54309102-54309121 None:intergenic 15.0%
!! AAAATAACAAACACATTAAT+TGG - chr4_3:54309695-54309714 None:intergenic 15.0%
!! ATAATAAACAAATTAATCTC+AGG - chr4_3:54310220-54310239 None:intergenic 15.0%
!! TTCAATTATTTAGAAATTCA+TGG + chr4_3:54310727-54310746 Msa0647960:intron 15.0%
!!! TTGAAACTTTTGAATTTTTT+CGG + chr4_3:54310810-54310829 Msa0647960:intron 15.0%
!!! TAAGAAAAGATTTCTTTTTT+AGG + chr4_3:54310957-54310976 Msa0647960:intron 15.0%
!! TTATTCAATGAATCTAAAAA+AGG + chr4_3:54311031-54311050 Msa0647960:intron 15.0%
!! ATTCATAACATAAAACTATT+GGG - chr4_3:54312995-54313014 None:intergenic 15.0%
!! AAATAACACAAATTAAACAT+AGG - chr4_3:54313100-54313119 None:intergenic 15.0%
!! AAATAATTCGAATAATGTTT+CGG - chr4_3:54313484-54313503 None:intergenic 15.0%
!! CACATTTAAATTTAAACAAT+GGG - chr4_3:54314346-54314365 None:intergenic 15.0%
!! TCACATTTAAATTTAAACAA+TGG - chr4_3:54314347-54314366 None:intergenic 15.0%
!!! TTGTTTTTTTCTTATAAATG+TGG + chr4_3:54314391-54314410 Msa0647960:intron 15.0%
!!! ATTTTAAATATATTGAAGTG+GGG - chr4_3:54314538-54314557 None:intergenic 15.0%
!!! CATTTTAAATATATTGAAGT+GGG - chr4_3:54314539-54314558 None:intergenic 15.0%
!!! ACATTTTAAATATATTGAAG+TGG - chr4_3:54314540-54314559 None:intergenic 15.0%
!!! AATTTTTTTCTTTTTAGACT+TGG - chr4_3:54314663-54314682 None:intergenic 15.0%
!!! AAAGTTCATAAAAGTATATT+TGG - chr4_3:54314714-54314733 None:intergenic 15.0%
!!! AACAATTTTCCTTAAATATT+GGG + chr4_3:54315164-54315183 Msa0647960:intron 15.0%
!!! TTTTGGTTTTTTAATTTTTG+TGG - chr4_3:54315347-54315366 None:intergenic 15.0%
!!! TATCATTAAAGAGTATTATA+GGG - chr4_3:54315516-54315535 None:intergenic 15.0%
!!! ATATCATTAAAGAGTATTAT+AGG - chr4_3:54315517-54315536 None:intergenic 15.0%
!!! TTTTATTATGAGACAAATTA+TGG - chr4_3:54315695-54315714 None:intergenic 15.0%
!! TCAAAACAAGTAATTTAATA+AGG - chr4_3:54316025-54316044 None:intergenic 15.0%
!!! ACTTTTTTTTATTCAATTGT+AGG + chr4_3:54317033-54317052 Msa0647960:intron 15.0%
!! TGTCAATTAAATAACAAATT+TGG - chr4_3:54317291-54317310 None:intergenic 15.0%
!! TATACATATATAATTATCAC+AGG + chr4_3:54317547-54317566 Msa0647960:intron 15.0%
!! AAAAAACAATACTAGTAAAA+TGG - chr4_3:54318019-54318038 None:intergenic 15.0%
!!! TTATGAAATATGTTATTTAG+AGG + chr4_3:54318103-54318122 Msa0647960:intron 15.0%
!! TTAAAATAATTAAGTAGACT+AGG - chr4_3:54318718-54318737 None:intergenic 15.0%
!!! TTAATTGTTGATTCAATTTT+AGG + chr4_3:54319365-54319384 Msa0647960:intron 15.0%
!!! TTTTCAAATGTTGATGTTTT+TGG - chr4_3:54305238-54305257 None:intergenic 20.0%
!!! GCAACGATAATAAATATTTT+AGG - chr4_3:54305451-54305470 None:intergenic 20.0%
!!! TTTTTGTACGAAATCATATT+CGG - chr4_3:54305667-54305686 None:intergenic 20.0%
!! TAAGCAAACTATTAAAATTG+AGG - chr4_3:54305837-54305856 None:intergenic 20.0%
!!! AGTTTGCTTAAACAATTTTT+AGG + chr4_3:54305847-54305866 Msa0647960:intron 20.0%
!!! TTAATAATGGGTAATTACAT+AGG - chr4_3:54306000-54306019 None:intergenic 20.0%
!!! TTTTTTCTTGATTGAATTGT+AGG + chr4_3:54306179-54306198 Msa0647960:intron 20.0%
!! ACAATTGAATATATTTACGT+AGG + chr4_3:54306437-54306456 Msa0647960:intron 20.0%
!! CAATTGAATATATTTACGTA+GGG + chr4_3:54306438-54306457 Msa0647960:intron 20.0%
!!! ATTGTTTTTTCTCATTTTGT+AGG + chr4_3:54306589-54306608 Msa0647960:intron 20.0%
!!! AAGAATGACTTTTATATTAC+TGG + chr4_3:54308032-54308051 Msa0647960:CDS 20.0%
!!! TTTATTTTCTTGATGAATTC+GGG - chr4_3:54308096-54308115 None:intergenic 20.0%
!!! CTTTATTTTCTTGATGAATT+CGG - chr4_3:54308097-54308116 None:intergenic 20.0%
!!! TTGAGGTTTATATGTATTTT+TGG - chr4_3:54308125-54308144 None:intergenic 20.0%
!! AAAAATACATATAAACCTCA+AGG + chr4_3:54308124-54308143 Msa0647960:CDS 20.0%
!! TTTGATCTTAATACAATAAC+AGG + chr4_3:54308290-54308309 Msa0647960:intron 20.0%
!! TTGATCTTAATACAATAACA+GGG + chr4_3:54308291-54308310 Msa0647960:intron 20.0%
!! ATAAGTATATTGTAAAATGC+AGG + chr4_3:54308803-54308822 Msa0647960:intron 20.0%
!! GTGACAATGTTAAATTAATT+TGG - chr4_3:54309358-54309377 None:intergenic 20.0%
!! GTGACAATGTTAAATTAATT+TGG - chr4_3:54309358-54309377 None:intergenic 20.0%
!!! TAAATCAGTCAATTTGATTT+TGG + chr4_3:54309653-54309672 Msa0647960:intron 20.0%
!!! TTTGTTATTTTGTTCTTGTT+TGG + chr4_3:54309704-54309723 Msa0647960:intron 20.0%
!! GAATATAAGTAACCAAAAAA+TGG - chr4_3:54309951-54309970 None:intergenic 20.0%
!!! TATGATCATAATTTTTGTTG+TGG + chr4_3:54310121-54310140 Msa0647960:intron 20.0%
!! CTTTATGTATAATATTTGGA+TGG + chr4_3:54310150-54310169 Msa0647960:intron 20.0%
!!! ACAATTGTATTTTTCAGTTT+AGG + chr4_3:54310498-54310517 Msa0647960:intron 20.0%
!! ATTGAGTTCTTAAATTCTTA+AGG + chr4_3:54310759-54310778 Msa0647960:intron 20.0%
!!! ATTTTGAAAGAATTCAAAAG+TGG - chr4_3:54310861-54310880 None:intergenic 20.0%
!!! TCTTTTCTTATATTTAAGAC+CGG + chr4_3:54311056-54311075 Msa0647960:intron 20.0%
!!! TATTTTGTATGTTTCAGATA+TGG + chr4_3:54311085-54311104 Msa0647960:intron 20.0%
!!! TGTAATGTATTTTAAGTGAA+CGG + chr4_3:54311422-54311441 Msa0647960:intron 20.0%
!!! TATACATGGTAATGAAAATT+TGG + chr4_3:54311551-54311570 Msa0647960:intron 20.0%
!! TGTTAACAAACATATTCAAT+AGG + chr4_3:54311935-54311954 Msa0647960:intron 20.0%
!! CATTCATAACATAAAACTAT+TGG - chr4_3:54312996-54313015 None:intergenic 20.0%
!!! TTAATTTGTGTTTGAATATG+TGG + chr4_3:54313039-54313058 Msa0647960:intron 20.0%
!! TTGAAATTGTATTAAACGTT+CGG + chr4_3:54313250-54313269 Msa0647960:intron 20.0%
!! TGTATGTGATCTTATATTTA+AGG - chr4_3:54313712-54313731 None:intergenic 20.0%
!!! TTAATACTACTAATTTGTCT+TGG + chr4_3:54313763-54313782 Msa0647960:intron 20.0%
!! AAATATGTATTTGGTTGTTA+AGG + chr4_3:54314686-54314705 Msa0647960:intron 20.0%
!!! AAGTGACATTCATTTTAAAA+CGG - chr4_3:54314780-54314799 None:intergenic 20.0%
!! ATGTGCTTAAATATGAAAAA+TGG + chr4_3:54314976-54314995 Msa0647960:intron 20.0%
!! TTAACTACATATGAAAATTG+AGG + chr4_3:54315092-54315111 Msa0647960:intron 20.0%
!!! CAACAATTTTCCTTAAATAT+TGG + chr4_3:54315163-54315182 Msa0647960:intron 20.0%
!!! TTCCTTATTTATTTACTTAC+TGG + chr4_3:54315206-54315225 Msa0647960:intron 20.0%
!!! TCCTTATTTATTTACTTACT+GGG + chr4_3:54315207-54315226 Msa0647960:intron 20.0%
!! TAAACATAACATAAACATCA+TGG - chr4_3:54315245-54315264 None:intergenic 20.0%
!!! AAACTCTTAATGTCATTTAT+TGG - chr4_3:54315323-54315342 None:intergenic 20.0%
!! TAATTTGAAAGACATTGTTA+TGG - chr4_3:54315548-54315567 None:intergenic 20.0%
!! TAACAATGTCTTTCAAATTA+CGG + chr4_3:54315548-54315567 Msa0647960:intron 20.0%
!!! AGAAGTAATAATCTGAAATT+AGG + chr4_3:54315920-54315939 Msa0647960:intron 20.0%
!!! TAAAATCAAATGTTATTTGG+TGG + chr4_3:54316747-54316766 Msa0647960:intron 20.0%
!!! ATCAACAAAAACAATGTTTT+TGG - chr4_3:54316789-54316808 None:intergenic 20.0%
!!! TACTTAGGTGTTATATATAT+TGG + chr4_3:54316852-54316871 Msa0647960:intron 20.0%
!! TGAATCAAGAAAAAATTCTA+AGG + chr4_3:54317073-54317092 Msa0647960:CDS 20.0%
!! AAACATGTATATTAATTACC+TGG - chr4_3:54317226-54317245 None:intergenic 20.0%
!!! TGTTTAATTTCTCATTTTGT+AGG + chr4_3:54317324-54317343 Msa0647960:intron 20.0%
!!! ATATATGTATATAAAAGCGT+AGG - chr4_3:54317538-54317557 None:intergenic 20.0%
!! TTATTATAAATCTCAAGGTT+TGG + chr4_3:54317696-54317715 Msa0647960:intron 20.0%
!! AGATAACAAATTGATTACAA+AGG + chr4_3:54317896-54317915 Msa0647960:CDS 20.0%
!!! GATTATTTAAAGAGTGTTAT+GGG - chr4_3:54317991-54318010 None:intergenic 20.0%
!!! TGATTATTTAAAGAGTGTTA+TGG - chr4_3:54317992-54318011 None:intergenic 20.0%
!! ACAAATTAACAAATGTCAAT+GGG - chr4_3:54318223-54318242 None:intergenic 20.0%
!!! AATTTGATCTTATTTGCAAT+TGG + chr4_3:54318673-54318692 Msa0647960:intron 20.0%
!!! ATTTGATCTTATTTGCAATT+GGG + chr4_3:54318674-54318693 Msa0647960:intron 20.0%
!!! ATTTGAAATTTGAATCCAAT+CGG + chr4_3:54318815-54318834 Msa0647960:intron 20.0%
!!! TGTTTTTTCATTTTGTTCTT+GGG + chr4_3:54319157-54319176 Msa0647960:intron 20.0%
!!! TTTCCTTTTTGTATGATATT+TGG + chr4_3:54319600-54319619 Msa0647960:three_prime_UTR 20.0%
!! AATCTGTTGATTATTATGTG+TGG - chr4_3:54305215-54305234 None:intergenic 25.0%
! CTGTAAAAAACTTGAAGTTT+CGG - chr4_3:54305556-54305575 None:intergenic 25.0%
! TTGACCAAATTCTAGATTAT+CGG + chr4_3:54305902-54305921 Msa0647960:intron 25.0%
!!! CTAGCTTTGTTTTATGAAAA+CGG + chr4_3:54306292-54306311 Msa0647960:CDS 25.0%
!!! ATTTTAAAGAAGGATTCATC+AGG + chr4_3:54306526-54306545 Msa0647960:intron 25.0%
!! TTATCTTGTTTATTCCTTGT+TGG - chr4_3:54306902-54306921 None:intergenic 25.0%
! TTCTTACAAAGAGATACAAA+TGG + chr4_3:54307026-54307045 Msa0647960:intron 25.0%
! TCTTACAAAGAGATACAAAT+GGG + chr4_3:54307027-54307046 Msa0647960:intron 25.0%
! TTAGTGAAATCAAATGCTAA+GGG - chr4_3:54307210-54307229 None:intergenic 25.0%
!! TTTTAGATACTAAAGGTTGA+GGG - chr4_3:54307406-54307425 None:intergenic 25.0%
!!! TTTAGGGTTTTAGATACTAA+AGG - chr4_3:54307413-54307432 None:intergenic 25.0%
! ACCAATTCTTTGTAAAAGTT+TGG + chr4_3:54307833-54307852 Msa0647960:intron 25.0%
!! ACCAAACTTTTACAAAGAAT+TGG - chr4_3:54307837-54307856 None:intergenic 25.0%
! CGAATTCATCAAGAAAATAA+AGG + chr4_3:54308095-54308114 Msa0647960:CDS 25.0%
!!! AATAAAATGTTGTTTTGTGC+CGG + chr4_3:54308200-54308219 Msa0647960:intron 25.0%
! ATCATAAACAATTCACATAC+CGG - chr4_3:54308222-54308241 None:intergenic 25.0%
!!! AAAAAAGGTACTGAATTCTA+GGG - chr4_3:54308344-54308363 None:intergenic 25.0%
!!! TAAAAAAGGTACTGAATTCT+AGG - chr4_3:54308345-54308364 None:intergenic 25.0%
! GGATAATCATTTGATTACAT+CGG + chr4_3:54308380-54308399 Msa0647960:CDS 25.0%
! GAGATTTAAATTGTTTGTAC+TGG - chr4_3:54308558-54308577 None:intergenic 25.0%
! TGACATTAGAAAGAAATGTA+TGG + chr4_3:54308830-54308849 Msa0647960:intron 25.0%
! GACATTAGAAAGAAATGTAT+GGG + chr4_3:54308831-54308850 Msa0647960:intron 25.0%
! TTTGATGAAAAGCTTTCATT+TGG + chr4_3:54308980-54308999 Msa0647960:CDS 25.0%
! TTGATGAAAAGCTTTCATTT+GGG + chr4_3:54308981-54309000 Msa0647960:CDS 25.0%
! ATCAAAGTTCTTATATATGC+TGG + chr4_3:54309029-54309048 Msa0647960:CDS 25.0%
! TCAAAGTTCTTATATATGCT+GGG + chr4_3:54309030-54309049 Msa0647960:CDS 25.0%
! AGACTATCTTAGGATAATTA+GGG - chr4_3:54309139-54309158 None:intergenic 25.0%
! AAGACTATCTTAGGATAATT+AGG - chr4_3:54309140-54309159 None:intergenic 25.0%
!!! TCAATTTTCAAGACTATCTT+AGG - chr4_3:54309149-54309168 None:intergenic 25.0%
! TTATTACGGTAGAGAATTTA+GGG - chr4_3:54309234-54309253 None:intergenic 25.0%
! ATTATTACGGTAGAGAATTT+AGG - chr4_3:54309235-54309254 None:intergenic 25.0%
! ATGATCAGTCTATTATAAGT+GGG - chr4_3:54309570-54309589 None:intergenic 25.0%
! TATGATCAGTCTATTATAAG+TGG - chr4_3:54309571-54309590 None:intergenic 25.0%
!! TTTTTACCGTCGATAATTTA+GGG - chr4_3:54309621-54309640 None:intergenic 25.0%
!! ATTTTTACCGTCGATAATTT+AGG - chr4_3:54309622-54309641 None:intergenic 25.0%
!! TGAATTCTTTAAACTGCTTT+TGG - chr4_3:54309771-54309790 None:intergenic 25.0%
! AAGCAGTTTAAAGAATTCAA+AGG + chr4_3:54309772-54309791 Msa0647960:CDS 25.0%
!! TAAACCTTTAGAAAATAGAG+AGG - chr4_3:54309859-54309878 None:intergenic 25.0%
!!! ACATACTTGATTCCATTTTT+TGG + chr4_3:54309936-54309955 Msa0647960:intron 25.0%
! TATGTATAATATTTGGATGG+TGG + chr4_3:54310153-54310172 Msa0647960:intron 25.0%
! ATTAATCAAAATATGGGCAT+TGG + chr4_3:54310259-54310278 Msa0647960:intron 25.0%
!!! AAATCTCTAAGATCAATTGT+GGG - chr4_3:54310414-54310433 None:intergenic 25.0%
!!! TAAATCTCTAAGATCAATTG+TGG - chr4_3:54310415-54310434 None:intergenic 25.0%
! AAATTATGAGTTTATCTCAC+CGG + chr4_3:54310595-54310614 Msa0647960:intron 25.0%
!!! TCTTTTCTTATATTTGAGAC+CGG - chr4_3:54310947-54310966 None:intergenic 25.0%
!! TTAATATATCGTCACTTTCA+TGG + chr4_3:54312249-54312268 Msa0647960:intron 25.0%
! ATATTATTAGGATCGATACA+TGG + chr4_3:54312284-54312303 Msa0647960:intron 25.0%
! AAATATATCTGAACTGTGTA+AGG - chr4_3:54313225-54313244 None:intergenic 25.0%
!!! AATTCGAACAAAGAGTATTT+TGG + chr4_3:54313504-54313523 Msa0647960:intron 25.0%
!!! ATTCGAACAAAGAGTATTTT+GGG + chr4_3:54313505-54313524 Msa0647960:intron 25.0%
! TTAAACTACTCCTACAAAAA+GGG - chr4_3:54313678-54313697 None:intergenic 25.0%
! TTTAAACTACTCCTACAAAA+AGG - chr4_3:54313679-54313698 None:intergenic 25.0%
! CAGGTATTAAGAAAAGTTAT+TGG - chr4_3:54313876-54313895 None:intergenic 25.0%
! TGTAAACTACTCCTATATAA+AGG + chr4_3:54313903-54313922 Msa0647960:intron 25.0%
!!! TGTAAACTTTTTCTTTAGAG+TGG - chr4_3:54313956-54313975 None:intergenic 25.0%
! GATATTGCATATTATATGCA+GGG + chr4_3:54314490-54314509 Msa0647960:intron 25.0%
! ATATTGCATATTATATGCAG+GGG + chr4_3:54314491-54314510 Msa0647960:intron 25.0%
!!! AGTGACATTCATTTTAAAAC+GGG - chr4_3:54314779-54314798 None:intergenic 25.0%
!!! AAAAAAGTTGATGGTAAAGT+TGG - chr4_3:54314870-54314889 None:intergenic 25.0%
!!! AGGTTATTTTAGTATTTTCG+TGG - chr4_3:54315032-54315051 None:intergenic 25.0%
!! ATTTTCCTTAAATATTGGGA+CGG + chr4_3:54315168-54315187 Msa0647960:intron 25.0%
!! CCTTATTTATTTACTTACTG+GGG + chr4_3:54315208-54315227 Msa0647960:intron 25.0%
! TCTTTCTACAAAATTCAAGA+AGG + chr4_3:54315471-54315490 Msa0647960:intron 25.0%
!!! ACTGAAATTGATGTTTTTAG+TGG - chr4_3:54315577-54315596 None:intergenic 25.0%
! CTATAATCATAAATGTAACG+TGG - chr4_3:54315771-54315790 None:intergenic 25.0%
!! TTACATTAACTGATTCCTTT+GGG - chr4_3:54316318-54316337 None:intergenic 25.0%
!! ATTACATTAACTGATTCCTT+TGG - chr4_3:54316319-54316338 None:intergenic 25.0%
! GAATCAGTTAATGTAATACA+TGG + chr4_3:54316322-54316341 Msa0647960:CDS 25.0%
! ATTAATTTACCTTGAAGAGT+TGG - chr4_3:54316476-54316495 None:intergenic 25.0%
! TGAATTCTTGAAATGAAGTT+AGG + chr4_3:54316662-54316681 Msa0647960:intron 25.0%
!!! GCTTTTGTTTGATTATACTT+AGG + chr4_3:54316837-54316856 Msa0647960:intron 25.0%
!!! TGACTTGTATTTTGTTACTT+AGG + chr4_3:54316941-54316960 Msa0647960:intron 25.0%
! ATTTGCCTTAATATACTATG+TGG + chr4_3:54317000-54317019 Msa0647960:intron 25.0%
! TATCACCACATAGTATATTA+AGG - chr4_3:54317008-54317027 None:intergenic 25.0%
!!! CTAGCTTTGTTTTATGAAAA+TGG + chr4_3:54306292-54306311 Msa0647960:CDS 25.0%
! AAATCATCAGCAATATGAAA+AGG - chr4_3:54317173-54317192 None:intergenic 25.0%
! ATGTTTACATATAGAGACAT+TGG + chr4_3:54317240-54317259 Msa0647960:intron 25.0%
! TTAATTGACATTCATGACTA+AGG + chr4_3:54317301-54317320 Msa0647960:intron 25.0%
! AAGAATGACTTCTATATTAC+TGG + chr4_3:54317599-54317618 Msa0647960:CDS 25.0%
! TGAGATTTATAATAATCCCT+TGG - chr4_3:54317691-54317710 None:intergenic 25.0%
! AGGGATTATTATAAATCTCA+AGG + chr4_3:54317691-54317710 Msa0647960:CDS 25.0%
! TTCTTTCCTAATACAATGAT+AGG + chr4_3:54317806-54317825 Msa0647960:intron 25.0%
! TCTTTCCTAATACAATGATA+GGG + chr4_3:54317807-54317826 Msa0647960:intron 25.0%
! GCTAGTGAAAAAAAAAATAG+CGG - chr4_3:54318174-54318193 None:intergenic 25.0%
! CACAAATTAACAAATGTCAA+TGG - chr4_3:54318224-54318243 None:intergenic 25.0%
!!! TATCTGTTGACATTGATTTA+AGG - chr4_3:54318289-54318308 None:intergenic 25.0%
! TTTGAGAAATCATAACACAA+TGG - chr4_3:54318474-54318493 None:intergenic 25.0%
! ATCAAAGTTCTTATATATGC+TGG + chr4_3:54309029-54309048 Msa0647960:CDS 25.0%
! TCAAAGTTCTTATATATGCT+GGG + chr4_3:54309030-54309049 Msa0647960:CDS 25.0%
!!! AAACCAAATTGTTTTAGCAA+TGG + chr4_3:54318737-54318756 Msa0647960:intron 25.0%
! TTTCCATTGCTAAAACAATT+TGG - chr4_3:54318743-54318762 None:intergenic 25.0%
! ACAATATCCTATAACTTTAG+GGG - chr4_3:54318786-54318805 None:intergenic 25.0%
! GACAATATCCTATAACTTTA+GGG - chr4_3:54318787-54318806 None:intergenic 25.0%
!! TTTGAAATTTGAATCCAATC+GGG + chr4_3:54318816-54318835 Msa0647960:intron 25.0%
! AATCTCAATTACATCAATTG+CGG - chr4_3:54319038-54319057 None:intergenic 25.0%
! CAGTTTATGAACTAAATTGA+TGG + chr4_3:54319110-54319129 Msa0647960:intron 25.0%
!!! GTGTTTTTTCATTTTGTTCT+TGG + chr4_3:54319156-54319175 Msa0647960:intron 25.0%
!! CTTTTTGTATGATATTTGGA+GGG + chr4_3:54319604-54319623 Msa0647960:three_prime_UTR 25.0%
TTAGATTAACTGGATCCTTT+GGG - chr4_3:54305285-54305304 None:intergenic 30.0%
ATTAGATTAACTGGATCCTT+TGG - chr4_3:54305286-54305305 None:intergenic 30.0%
GATCCAGTTAATCTAATACA+TGG + chr4_3:54305289-54305308 Msa0647960:CDS 30.0%
TTGCCATGTATTAGATTAAC+TGG - chr4_3:54305295-54305314 None:intergenic 30.0%
GAAAATCTCAATCACCATTT+CGG + chr4_3:54305388-54305407 Msa0647960:CDS 30.0%
!!! GAAGTTTCGGTTTTAGTTTA+AGG - chr4_3:54305543-54305562 None:intergenic 30.0%
! GATTCCGATAATCTAGAATT+TGG - chr4_3:54305909-54305928 None:intergenic 30.0%
GAGAGATAACTGTCATAATT+TGG + chr4_3:54306065-54306084 Msa0647960:intron 30.0%
!! TCTCTTGTTTGGAATGATTT+TGG + chr4_3:54306340-54306359 Msa0647960:CDS 30.0%
! CAGAAGAGTATATTTACGTA+GGG - chr4_3:54306395-54306414 None:intergenic 30.0%
! ACAGAAGAGTATATTTACGT+AGG - chr4_3:54306396-54306415 None:intergenic 30.0%
GAATAGTTCAACAAAGAAAG+CGG + chr4_3:54306463-54306482 Msa0647960:intron 30.0%
CTAAACAGATTGAACAAAGA+CGG - chr4_3:54306491-54306510 None:intergenic 30.0%
CTAACAACAGTTTCATTATG+TGG - chr4_3:54306685-54306704 None:intergenic 30.0%
! ATTGGTGTGAAATTTGAGTT+CGG - chr4_3:54306782-54306801 None:intergenic 30.0%
!! TTGTTGCTTGTGGTTAATTT+TGG - chr4_3:54306848-54306867 None:intergenic 30.0%
TTGTAAGAACTCATTGATAG+TGG - chr4_3:54307015-54307034 None:intergenic 30.0%
GAAACAATTGTAAACACCTT+GGG - chr4_3:54307153-54307172 None:intergenic 30.0%
CTTAGTGAAATCAAATGCTA+AGG - chr4_3:54307211-54307230 None:intergenic 30.0%
! CTTAGCATTTGATTTCACTA+AGG + chr4_3:54307209-54307228 Msa0647960:intron 30.0%
!! GTTTTAGATACTAAAGGTTG+AGG - chr4_3:54307407-54307426 None:intergenic 30.0%
!!! CATTCTTTGACCCATTTTTT+GGG - chr4_3:54307475-54307494 None:intergenic 30.0%
CAAAAAATGGTTGTAGATGT+TGG - chr4_3:54307737-54307756 None:intergenic 30.0%
AGTCATTCTTAAGAAACTCA+GGG - chr4_3:54308022-54308041 None:intergenic 30.0%
AAGTCATTCTTAAGAAACTC+AGG - chr4_3:54308023-54308042 None:intergenic 30.0%
!! AATTGTCTTGCATGTTTTGA+TGG + chr4_3:54308266-54308285 Msa0647960:intron 30.0%
CTGCAAATTGTGTGTAAAAA+AGG - chr4_3:54308359-54308378 None:intergenic 30.0%
! TTTTTACACACAATTTGCAG+AGG + chr4_3:54308359-54308378 Msa0647960:CDS 30.0%
AAGTAAAATAGGGATGTGAT+CGG - chr4_3:54308472-54308491 None:intergenic 30.0%
AACATTAATGTTACCAGCAA+TGG - chr4_3:54308704-54308723 None:intergenic 30.0%
! GTGTTATGACTTTTCAAAGT+TGG + chr4_3:54308860-54308879 Msa0647960:CDS 30.0%
TTCTAAATGACCATGAAGTT+AGG + chr4_3:54308889-54308908 Msa0647960:CDS 30.0%
TCTAAATGACCATGAAGTTA+GGG + chr4_3:54308890-54308909 Msa0647960:CDS 30.0%
CAAAGTTCTTATATATGCTG+GGG + chr4_3:54309031-54309050 Msa0647960:CDS 30.0%
! GATTTTATATGCAATTGGCT+TGG + chr4_3:54309059-54309078 Msa0647960:CDS 30.0%
TTGGTCAGTCTATTATAAGT+GGG - chr4_3:54309183-54309202 None:intergenic 30.0%
TTTGGTCAGTCTATTATAAG+TGG - chr4_3:54309184-54309203 None:intergenic 30.0%
ACTGATCATACATGATATGT+TGG + chr4_3:54309581-54309600 Msa0647960:intron 30.0%
TTCAAACCCTAAATTATCGA+CGG + chr4_3:54309612-54309631 Msa0647960:intron 30.0%
!! TATTTTGTTCTTGTTTGGTC+AGG + chr4_3:54309709-54309728 Msa0647960:intron 30.0%
!! ATTTTGTTCTTGTTTGGTCA+GGG + chr4_3:54309710-54309729 Msa0647960:intron 30.0%
TTTGGTCAGGGAATTATAAT+TGG + chr4_3:54309722-54309741 Msa0647960:intron 30.0%
TTGGTCAGGGAATTATAATT+GGG + chr4_3:54309723-54309742 Msa0647960:intron 30.0%
! ATTCAAAGGAGTTCCATTTT+TGG + chr4_3:54309786-54309805 Msa0647960:CDS 30.0%
TCAATACCATCAACCAAAAA+TGG - chr4_3:54309802-54309821 None:intergenic 30.0%
!! GGTTGATGGTATTGATATTA+AGG + chr4_3:54309807-54309826 Msa0647960:CDS 30.0%
ATATTCATGTGTTGTGCAAT+AGG + chr4_3:54309965-54309984 Msa0647960:intron 30.0%
TGGCTTCTTACTTCAAATTT+AGG - chr4_3:54310472-54310491 None:intergenic 30.0%
GCAAAATCAGAATTTCTTTC+CGG - chr4_3:54310617-54310636 None:intergenic 30.0%
ATATAATCAATTACTCCCTC+CGG + chr4_3:54310925-54310944 Msa0647960:intron 30.0%
! TTTCTTATATTTAAGACCGG+AGG + chr4_3:54311059-54311078 Msa0647960:intron 30.0%
! TTCTTATATTTAAGACCGGA+GGG + chr4_3:54311060-54311079 Msa0647960:intron 30.0%
! ATTTAAGGTGCGTAAACAAT+GGG + chr4_3:54311515-54311534 Msa0647960:intron 30.0%
!! TGTTTGCTTTTGTTGAAAGA+TGG + chr4_3:54311670-54311689 Msa0647960:intron 30.0%
TCATCTTCTCAATCAAAAGA+TGG - chr4_3:54311716-54311735 None:intergenic 30.0%
ATATGGTTTCTGATTATGCT+TGG + chr4_3:54312117-54312136 Msa0647960:intron 30.0%
TATGGTTTCTGATTATGCTT+GGG + chr4_3:54312118-54312137 Msa0647960:intron 30.0%
CTCTCTATATAAGTGAACAA+GGG - chr4_3:54312153-54312172 None:intergenic 30.0%
TATAAGAACATCATGTCATG+TGG - chr4_3:54312197-54312216 None:intergenic 30.0%
AGTCGGTGTATCATATTATT+AGG + chr4_3:54312272-54312291 Msa0647960:intron 30.0%
!! CTTTAAGGTAACATACATCA+TGG - chr4_3:54312328-54312347 None:intergenic 30.0%
GAGAGAATCAGTATTTACTA+TGG + chr4_3:54312450-54312469 Msa0647960:intron 30.0%
TAGACATGAATGAACAGTTA+GGG + chr4_3:54312824-54312843 Msa0647960:intron 30.0%
!!! TTGTCGTTTTGTGAAAACAA+AGG + chr4_3:54313185-54313204 Msa0647960:intron 30.0%
! ACAACAATTTTCCTCTAACA+TGG + chr4_3:54313302-54313321 Msa0647960:intron 30.0%
GAGCTTGTAAAAATGTTGTT+TGG - chr4_3:54313398-54313417 None:intergenic 30.0%
! AACAACATTTTTACAAGCTC+TGG + chr4_3:54313398-54313417 Msa0647960:intron 30.0%
! CCTTCAGTTTTTACATAGTT+CGG + chr4_3:54313448-54313467 Msa0647960:intron 30.0%
! GAGGGAGTAATTTTTATTCA+AGG - chr4_3:54313652-54313671 None:intergenic 30.0%
AAAAGAGTAATCATGCATCT+AGG - chr4_3:54313739-54313758 None:intergenic 30.0%
! GAGTAGTTTACAAAAAGTAC+AGG - chr4_3:54313895-54313914 None:intergenic 30.0%
!!! CTTTTAGAGTGATGTAGTTA+TGG + chr4_3:54314294-54314313 Msa0647960:intron 30.0%
GGATATTGCATATTATATGC+AGG + chr4_3:54314489-54314508 Msa0647960:intron 30.0%
TTACATTTAGAGAAGTCTAG+TGG - chr4_3:54314572-54314591 None:intergenic 30.0%
AACTTTCAAACACACGTATA+AGG - chr4_3:54314603-54314622 None:intergenic 30.0%
!!! ACGTGTGTTTGAAAGTTTTT+TGG + chr4_3:54314606-54314625 Msa0647960:intron 30.0%
!!! TTTTTTGGAGTGATGAACAA+GGG + chr4_3:54314621-54314640 Msa0647960:intron 30.0%
!!! TGACATTCATTTTAAAACGG+GGG - chr4_3:54314777-54314796 None:intergenic 30.0%
!!! GTGACATTCATTTTAAAACG+GGG - chr4_3:54314778-54314797 None:intergenic 30.0%
TTGTGTGAGAAAAAAGTTGA+TGG - chr4_3:54314879-54314898 None:intergenic 30.0%
TTCCTAGAATCATTTGATGT+GGG - chr4_3:54315006-54315025 None:intergenic 30.0%
TTTCCTAGAATCATTTGATG+TGG - chr4_3:54315007-54315026 None:intergenic 30.0%
!! TGTCGATGAATTTTAACCAA+CGG + chr4_3:54315066-54315085 Msa0647960:intron 30.0%
CATATGTAGTTAATTACCGT+TGG - chr4_3:54315085-54315104 None:intergenic 30.0%
CCCCAGTAAGTAAATAAATA+AGG - chr4_3:54315211-54315230 None:intergenic 30.0%
AAATTCGAGATTTCCTGAAT+TGG - chr4_3:54315435-54315454 None:intergenic 30.0%
TCAATACACTCTCTCAAAAT+AGG + chr4_3:54315639-54315658 Msa0647960:intron 30.0%
! CTTCACAACTTTTCAACTTT+TGG - chr4_3:54316063-54316082 None:intergenic 30.0%
! TCTTGTTTGTGAAAAAAGTG+AGG - chr4_3:54316129-54316148 None:intergenic 30.0%
ACAAACAAGAACAAACAACA+TGG + chr4_3:54316139-54316158 Msa0647960:intron 30.0%
CAAACAAGAACAAACAACAT+GGG + chr4_3:54316140-54316159 Msa0647960:intron 30.0%
! AAAAAGAGACAAAGAGGTTT+TGG - chr4_3:54316171-54316190 None:intergenic 30.0%
AGAACAAAAAAGAGACAAAG+AGG - chr4_3:54316177-54316196 None:intergenic 30.0%
TTTGGTGAAAATGTTGTTGA+TGG - chr4_3:54316256-54316275 None:intergenic 30.0%
!!! TCGTTTTTTAGTGATTCTGA+TGG + chr4_3:54316397-54316416 Msa0647960:intron 30.0%
AAATCACGTAAAAATCAGCA+TGG - chr4_3:54316565-54316584 None:intergenic 30.0%
! AATCAAATGTTATTTGGTGG+TGG + chr4_3:54316750-54316769 Msa0647960:intron 30.0%
! ATCAAATGTTATTTGGTGGT+GGG + chr4_3:54316751-54316770 Msa0647960:intron 30.0%
!! TGTTTTTGTTGATGAGATCT+AGG + chr4_3:54316796-54316815 Msa0647960:intron 30.0%
CAAAACCCTATCATTGTATT+AGG - chr4_3:54317815-54317834 None:intergenic 30.0%
! ATCTTATCATACCATCGTTT+TGG - chr4_3:54318129-54318148 None:intergenic 30.0%
GACATAAGAAAGAAATGTCA+AGG + chr4_3:54318447-54318466 Msa0647960:CDS 30.0%
GTGTTATGATTTCTCAAATG+TGG + chr4_3:54318476-54318495 Msa0647960:CDS 30.0%
TATGAACAAGAAGACAGTTA+AGG + chr4_3:54318506-54318525 Msa0647960:CDS 30.0%
ATAATGCTATGGTACAAGAT+TGG + chr4_3:54318580-54318599 Msa0647960:CDS 30.0%
CAAAGTTCTTATATATGCTG+GGG + chr4_3:54309031-54309050 Msa0647960:CDS 30.0%
! ATAACTTTAGGGGCTAAAAT+TGG - chr4_3:54318776-54318795 None:intergenic 30.0%
!! ATTTTAGCCCCTAAAGTTAT+AGG + chr4_3:54318776-54318795 Msa0647960:intron 30.0%
CGACAATATCCTATAACTTT+AGG - chr4_3:54318788-54318807 None:intergenic 30.0%
ACAACGTTCAATATCAATCA+AGG - chr4_3:54318866-54318885 None:intergenic 30.0%
ACAGTTCAATTTGTAGTTGA+TGG + chr4_3:54319245-54319264 Msa0647960:intron 30.0%
TGATTTATGTGATGTGTAAC+AGG + chr4_3:54319394-54319413 Msa0647960:intron 30.0%
TCTAGACATGATTGAATCAA+TGG - chr4_3:54319530-54319549 None:intergenic 30.0%
! GGAAAGTACACAATAATGTT+GGG - chr4_3:54319585-54319604 None:intergenic 30.0%
! AGGAAAGTACACAATAATGT+TGG - chr4_3:54319586-54319605 None:intergenic 30.0%
CCTCCAAATATCATACAAAA+AGG - chr4_3:54319606-54319625 None:intergenic 30.0%
! CCTTTTTGTATGATATTTGG+AGG + chr4_3:54319603-54319622 Msa0647960:three_prime_UTR 30.0%
! CAAAAGAGACATAGAGGTTT+TGG - chr4_3:54305149-54305168 None:intergenic 35.0%
CAACAACAAAAGAGACATAG+AGG - chr4_3:54305155-54305174 None:intergenic 35.0%
TAGATTAACTGGATCCTTTG+GGG - chr4_3:54305284-54305303 None:intergenic 35.0%
!! CAATCTTTTGATTATGTCCC+TGG + chr4_3:54305316-54305335 Msa0647960:CDS 35.0%
TCTTCTCTACAATCTTTCCA+GGG - chr4_3:54305336-54305355 None:intergenic 35.0%
TTCTTCTCTACAATCTTTCC+AGG - chr4_3:54305337-54305356 None:intergenic 35.0%
GAATCGAATAGTATCCGAAA+TGG - chr4_3:54305405-54305424 None:intergenic 35.0%
CAACAATTACACTGCAATTG+TGG + chr4_3:54305505-54305524 Msa0647960:intron 35.0%
ATGACGGTTATCTCAATGAT+TGG - chr4_3:54306110-54306129 None:intergenic 35.0%
!!! TGAACTATTTTTGCCCTATG+TGG + chr4_3:54306135-54306154 Msa0647960:intron 35.0%
GTTCGATTCATAACCACATA+GGG - chr4_3:54306151-54306170 None:intergenic 35.0%
AGTTCGATTCATAACCACAT+AGG - chr4_3:54306152-54306171 None:intergenic 35.0%
AAGTCATCGGCAATATGAAA+AGG - chr4_3:54306319-54306338 None:intergenic 35.0%
!! TTGTTTGGAATGATTTTGGC+TGG + chr4_3:54306344-54306363 Msa0647960:CDS 35.0%
!!! TGTTTGGAATGATTTTGGCT+GGG + chr4_3:54306345-54306364 Msa0647960:CDS 35.0%
ATATTTACGTAGGGTCGAAT+AGG - chr4_3:54306447-54306466 None:intergenic 35.0%
! TATTTTGTAGACCAACCCAT+TGG + chr4_3:54306622-54306641 Msa0647960:intron 35.0%
! ATTTTGTAGACCAACCCATT+GGG + chr4_3:54306623-54306642 Msa0647960:intron 35.0%
! CCACACATCATAGTTTGTAT+TGG - chr4_3:54306800-54306819 None:intergenic 35.0%
CCAATACAAACTATGATGTG+TGG + chr4_3:54306797-54306816 Msa0647960:intron 35.0%
!! TTGTGGTTAATTTTGGTCGT+TGG - chr4_3:54306841-54306860 None:intergenic 35.0%
! TGGTTTATAGTTGTTGCTTG+TGG - chr4_3:54306858-54306877 None:intergenic 35.0%
GTTTATTCCTTGTTGGATTG+TGG - chr4_3:54306895-54306914 None:intergenic 35.0%
!! AGAACTCATTGATAGTGGAT+TGG - chr4_3:54307010-54307029 None:intergenic 35.0%
GGGAAAATGGGTAGAAATTA+GGG - chr4_3:54307091-54307110 None:intergenic 35.0%
TGGGAAAATGGGTAGAAATT+AGG - chr4_3:54307092-54307111 None:intergenic 35.0%
CATTGTGAGATTGGGAAAAT+GGG - chr4_3:54307103-54307122 None:intergenic 35.0%
TCATTGTGAGATTGGGAAAA+TGG - chr4_3:54307104-54307123 None:intergenic 35.0%
! GTCTTGTTCATTGTGAGATT+GGG - chr4_3:54307111-54307130 None:intergenic 35.0%
! TGTCTTGTTCATTGTGAGAT+TGG - chr4_3:54307112-54307131 None:intergenic 35.0%
! CATGAATTTTTACTCTCCCA+AGG + chr4_3:54307134-54307153 Msa0647960:intron 35.0%
GGAAACAATTGTAAACACCT+TGG - chr4_3:54307154-54307173 None:intergenic 35.0%
TGAAATCAAATGCTAAGGGT+TGG - chr4_3:54307206-54307225 None:intergenic 35.0%
TCTTGTGAAACCAAAAGAGA+AGG - chr4_3:54307236-54307255 None:intergenic 35.0%
! GAGTCTTTTGTAAGCAACAT+GGG - chr4_3:54307263-54307282 None:intergenic 35.0%
! AGAGTCTTTTGTAAGCAACA+TGG - chr4_3:54307264-54307283 None:intergenic 35.0%
AATCTTGGAGAACCAAAAGA+GGG - chr4_3:54307351-54307370 None:intergenic 35.0%
AAGCTTCAAGATGTGAATCT+TGG - chr4_3:54307366-54307385 None:intergenic 35.0%
ACCAAGCTTACCCAAAAAAT+GGG + chr4_3:54307462-54307481 Msa0647960:intron 35.0%
!!! GCATTCTTTGACCCATTTTT+TGG - chr4_3:54307476-54307495 None:intergenic 35.0%
! ATTGAGTCTTTGTGTTTCTG+AGG - chr4_3:54307701-54307720 None:intergenic 35.0%
!!! ATGATCACAGTCTTTTTTCG+AGG + chr4_3:54307992-54308011 Msa0647960:intron 35.0%
GGAAAAAATGTAAGACCTTG+AGG - chr4_3:54308142-54308161 None:intergenic 35.0%
!! CAATAACAGGGTATTGCTAT+TGG + chr4_3:54308303-54308322 Msa0647960:intron 35.0%
GATTACATCGGAACAAAGAA+AGG + chr4_3:54308392-54308411 Msa0647960:CDS 35.0%
ATCGATGATGAATTGTACGA+AGG + chr4_3:54308417-54308436 Msa0647960:CDS 35.0%
TCGATGATGAATTGTACGAA+GGG + chr4_3:54308418-54308437 Msa0647960:CDS 35.0%
ACGGAAGCAACATATAATTG+TGG + chr4_3:54308444-54308463 Msa0647960:intron 35.0%
TTTGATTCATCAGACACTCA+AGG + chr4_3:54308616-54308635 Msa0647960:intron 35.0%
! GGACAAGATCTTATTTGGTA+TGG - chr4_3:54308683-54308702 None:intergenic 35.0%
GCAATGGACAAGATCTTATT+TGG - chr4_3:54308688-54308707 None:intergenic 35.0%
AATAAGATCTTGTCCATTGC+TGG + chr4_3:54308688-54308707 Msa0647960:intron 35.0%
CTAAATGACCATGAAGTTAG+GGG + chr4_3:54308891-54308910 Msa0647960:CDS 35.0%
CTATAATACCCCTAACTTCA+TGG - chr4_3:54308902-54308921 None:intergenic 35.0%
!! CATGAAGTTAGGGGTATTAT+AGG + chr4_3:54308900-54308919 Msa0647960:CDS 35.0%
AGTAGTGTATGATGCTATGA+GGG + chr4_3:54308953-54308972 Msa0647960:CDS 35.0%
ACTGACCAAACATGATATGT+TGG + chr4_3:54309194-54309213 Msa0647960:intron 35.0%
AAAATTTAGACCCGCCAAAA+AGG - chr4_3:54309311-54309330 None:intergenic 35.0%
AAAATTTAGACCCGCCAAAA+AGG - chr4_3:54309311-54309330 None:intergenic 35.0%
!! ATTGGGTTAGTTTCTTACAG+TGG + chr4_3:54309740-54309759 Msa0647960:CDS 35.0%
!! GGTATTGATATTAAGGAAGC+AGG + chr4_3:54309814-54309833 Msa0647960:CDS 35.0%
CAGGAATGTTGTATACCTTT+GGG + chr4_3:54309833-54309852 Msa0647960:CDS 35.0%
TGTGTTGTGCAATAGGTTTA+TGG + chr4_3:54309972-54309991 Msa0647960:intron 35.0%
!!! GTCGTGGGATATTTTGATTT+TGG - chr4_3:54310096-54310115 None:intergenic 35.0%
AATCAAAATATCCCACGACA+TGG + chr4_3:54310097-54310116 Msa0647960:intron 35.0%
TATGATCATATCCATGTCGT+GGG - chr4_3:54310111-54310130 None:intergenic 35.0%
TTATGATCATATCCATGTCG+TGG - chr4_3:54310112-54310131 None:intergenic 35.0%
!!! ATGCAAGCAAGTATCGATTT+TGG + chr4_3:54310183-54310202 Msa0647960:intron 35.0%
AGTGAAGAGAAGACTACAAA+CGG - chr4_3:54310357-54310376 None:intergenic 35.0%
AGATCAATTGTGGGAATAGA+AGG - chr4_3:54310405-54310424 None:intergenic 35.0%
TCCATTAGACATTCATGAGT+TGG + chr4_3:54310563-54310582 Msa0647960:intron 35.0%
ACCAACTCATGAATGTCTAA+TGG - chr4_3:54310567-54310586 None:intergenic 35.0%
CGGCATTCATAGAGAATTAA+AGG + chr4_3:54310830-54310849 Msa0647960:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG - chr4_3:54310943-54310962 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG - chr4_3:54310944-54310963 None:intergenic 35.0%
AACATACAAAATACTCCCTC+CGG - chr4_3:54311078-54311097 None:intergenic 35.0%
TGAGAACAAACAAGACACAT+GGG - chr4_3:54311330-54311349 None:intergenic 35.0%
TTGCAGTGACATACCATTTA+AGG + chr4_3:54311500-54311519 Msa0647960:intron 35.0%
CATTGTTTACGCACCTTAAA+TGG - chr4_3:54311516-54311535 None:intergenic 35.0%
! CATTTAAGGTGCGTAAACAA+TGG + chr4_3:54311514-54311533 Msa0647960:intron 35.0%
TGCGTAAACAATGGGAAAAA+CGG + chr4_3:54311523-54311542 Msa0647960:intron 35.0%
!! TTGAAGACTATTGGTTCGTA+AGG - chr4_3:54311607-54311626 None:intergenic 35.0%
TACGAACCAATAGTCTTCAA+CGG + chr4_3:54311607-54311626 Msa0647960:intron 35.0%
!! TGATTTGATGGTGAAGATGT+TGG + chr4_3:54311833-54311852 Msa0647960:intron 35.0%
!! GATTTGATGGTGAAGATGTT+GGG + chr4_3:54311834-54311853 Msa0647960:intron 35.0%
!! ATTTGATGGTGAAGATGTTG+GGG + chr4_3:54311835-54311854 Msa0647960:intron 35.0%
!! GAGTAATGCTCATCACTTTT+TGG + chr4_3:54311897-54311916 Msa0647960:intron 35.0%
!!! ATCACTTTTTGGCTAGTTGA+GGG + chr4_3:54311908-54311927 Msa0647960:intron 35.0%
CAAGGTAGAATAGATAGAAG+CGG - chr4_3:54312022-54312041 None:intergenic 35.0%
CTTCTATCTATTCTACCTTG+TGG + chr4_3:54312022-54312041 Msa0647960:intron 35.0%
CATAATCAGAAACCATATCC+AGG - chr4_3:54312115-54312134 None:intergenic 35.0%
ATGGTTTCTGATTATGCTTG+GGG + chr4_3:54312119-54312138 Msa0647960:intron 35.0%
GCTCTCTATATAAGTGAACA+AGG - chr4_3:54312154-54312173 None:intergenic 35.0%
TTATTAGGATCGATACATGG+AGG + chr4_3:54312287-54312306 Msa0647960:intron 35.0%
TAACATACATCATGGCATGT+GGG - chr4_3:54312320-54312339 None:intergenic 35.0%
TACGACAACATGACTCTTTA+AGG - chr4_3:54312343-54312362 None:intergenic 35.0%
! TGATCTAGATGCGATTTTAC+AGG - chr4_3:54312369-54312388 None:intergenic 35.0%
TCTCCAATAGACATATCTGA+TGG - chr4_3:54312434-54312453 None:intergenic 35.0%
TGGTTTAGAGATAACCAAAC+TGG - chr4_3:54312530-54312549 None:intergenic 35.0%
GTTATCTCTAAACCATCCAA+AGG + chr4_3:54312535-54312554 Msa0647960:intron 35.0%
TAAGGATTTGCATAGTCATG+TGG - chr4_3:54312564-54312583 None:intergenic 35.0%
CAAGATAATGCACATAGTGT+TGG - chr4_3:54312608-54312627 None:intergenic 35.0%
AATCATGCGTTGTTAACACA+TGG - chr4_3:54312632-54312651 None:intergenic 35.0%
TGTGTTAACAACGCATGATT+TGG + chr4_3:54312632-54312651 Msa0647960:intron 35.0%
GTGTTAACAACGCATGATTT+GGG + chr4_3:54312633-54312652 Msa0647960:intron 35.0%
TTGATGCAAGATACATGAGA+TGG + chr4_3:54312682-54312701 Msa0647960:intron 35.0%
ATATGAACATTCTCCGACAA+AGG - chr4_3:54312736-54312755 None:intergenic 35.0%
CTCGACAACAATCACATTAA+AGG - chr4_3:54312782-54312801 None:intergenic 35.0%
CTTTAATGTGATTGTTGTCG+AGG + chr4_3:54312780-54312799 Msa0647960:intron 35.0%
AGGAGCAAGGAGAAAATTAA+TGG + chr4_3:54312800-54312819 Msa0647960:intron 35.0%
CTAGACATGAATGAACAGTT+AGG + chr4_3:54312823-54312842 Msa0647960:intron 35.0%
GAATATGTGGATGTAACCTA+TGG + chr4_3:54313052-54313071 Msa0647960:intron 35.0%
TGGATGTAACCTATGGATAT+TGG + chr4_3:54313059-54313078 Msa0647960:intron 35.0%
AAAGTAGCACCAATATCCAT+AGG - chr4_3:54313071-54313090 None:intergenic 35.0%
TATGTTTCAAACCCCTTAGA+AGG - chr4_3:54313328-54313347 None:intergenic 35.0%
CCGAACTATGTAAAAACTGA+AGG - chr4_3:54313451-54313470 None:intergenic 35.0%
ACTACTCCTATATAAAGGTG+CGG + chr4_3:54313908-54313927 Msa0647960:intron 35.0%
GAGAGAGAGAAGATGATTAA+TGG + chr4_3:54314150-54314169 Msa0647960:intron 35.0%
!!! GAAATCTCTCTTGTTTTCTG+CGG - chr4_3:54314190-54314209 None:intergenic 35.0%
TCTTATAAATGTGGCTAGAG+AGG + chr4_3:54314400-54314419 Msa0647960:intron 35.0%
CTTATAAATGTGGCTAGAGA+GGG + chr4_3:54314401-54314420 Msa0647960:intron 35.0%
GTGAGTTTAGATCAGTTGAT+AGG + chr4_3:54314468-54314487 Msa0647960:intron 35.0%
TCAAACACACGTATAAGGAT+TGG - chr4_3:54314598-54314617 None:intergenic 35.0%
!!! GTTTTTTGGAGTGATGAACA+AGG + chr4_3:54314620-54314639 Msa0647960:intron 35.0%
TTCCCACATCAAATGATTCT+AGG + chr4_3:54315001-54315020 Msa0647960:intron 35.0%
TCAAATGCAACCAATAGTGT+AGG + chr4_3:54315892-54315911 Msa0647960:intron 35.0%
GCATTCAGAGAACATTCAAA+CGG - chr4_3:54316087-54316106 None:intergenic 35.0%
TGTGAAAAAAGTGAGGCAAT+GGG - chr4_3:54316122-54316141 None:intergenic 35.0%
TTGTGAAAAAAGTGAGGCAA+TGG - chr4_3:54316123-54316142 None:intergenic 35.0%
!!! AGCTTTTCAGCTTGTTGATT+TGG - chr4_3:54316274-54316293 None:intergenic 35.0%
AAGCTTCAACTTATTCCCAA+AGG + chr4_3:54316300-54316319 Msa0647960:intron 35.0%
! TTTGTTGATCATTTTCTCCC+CGG + chr4_3:54316352-54316371 Msa0647960:CDS 35.0%
TGACCAAGATCTTCAATAGA+AGG - chr4_3:54316424-54316443 None:intergenic 35.0%
GCTTCATACATTCTTATCGT+TGG - chr4_3:54316620-54316639 None:intergenic 35.0%
CTTGAAATGAAGTTAGGAGT+TGG + chr4_3:54316668-54316687 Msa0647960:intron 35.0%
! CTGATGATTTGTCTCTTGTA+TGG + chr4_3:54317183-54317202 Msa0647960:CDS 35.0%
TCTCTTGTATGGAATGACTA+TGG + chr4_3:54317194-54317213 Msa0647960:CDS 35.0%
TTGTATGGAATGACTATGGT+TGG + chr4_3:54317198-54317217 Msa0647960:CDS 35.0%
TGTATGGAATGACTATGGTT+GGG + chr4_3:54317199-54317218 Msa0647960:CDS 35.0%
! TTTTTGTCGACCAACCAATT+GGG + chr4_3:54317359-54317378 Msa0647960:CDS 35.0%
GATATTCCACATGATGAAAC+TGG + chr4_3:54317412-54317431 Msa0647960:CDS 35.0%
! TGATTTGTACGATTTCTTGC+AGG + chr4_3:54317444-54317463 Msa0647960:CDS 35.0%
ATTACTGGAGAATCATATGC+TGG + chr4_3:54317614-54317633 Msa0647960:CDS 35.0%
AAAGGAAACAAAGACAACCA+AGG + chr4_3:54317671-54317690 Msa0647960:CDS 35.0%
AAGGAAACAAAGACAACCAA+GGG + chr4_3:54317672-54317691 Msa0647960:CDS 35.0%
!! CAATGATAGGGTTTTGCTAT+TGG + chr4_3:54317819-54317838 Msa0647960:intron 35.0%
!!! TAGGGTTTTGCTATTGGTAA+TGG + chr4_3:54317825-54317844 Msa0647960:intron 35.0%
! TTTTGTACCGCAAGATTTTG+TGG - chr4_3:54317967-54317986 None:intergenic 35.0%
TTATTTAGAGGCCAAAACGA+TGG + chr4_3:54318115-54318134 Msa0647960:intron 35.0%
GTTTGATTATCAGAGAGTGA+AGG + chr4_3:54318243-54318262 Msa0647960:intron 35.0%
AAGACAGTTAAGGATGCTTT+AGG + chr4_3:54318516-54318535 Msa0647960:CDS 35.0%
! TTAAGGATGCTTTAGGTGTT+GGG + chr4_3:54318523-54318542 Msa0647960:CDS 35.0%
CAAAGATGTGCATAATGCTA+TGG + chr4_3:54318569-54318588 Msa0647960:CDS 35.0%
TGATATTCCTGAACTTCTTG+AGG + chr4_3:54318620-54318639 Msa0647960:CDS 35.0%
! GATCTTATTTGCAATTGGGT+TGG + chr4_3:54318678-54318697 Msa0647960:intron 35.0%
ATATTGAACGTTGTCCTTTG+AGG + chr4_3:54318872-54318891 Msa0647960:intron 35.0%
! TTTTCATTTTGTTCTTGGGC+AGG + chr4_3:54319161-54319180 Msa0647960:intron 35.0%
! TTTCATTTTGTTCTTGGGCA+GGG + chr4_3:54319162-54319181 Msa0647960:intron 35.0%
! CTAACCTTTAGAAAAGAGAG+AGG - chr4_3:54319302-54319321 None:intergenic 35.0%
!! AAGCTTTAACTTGTCCCCAA+AGG + chr4_3:54305267-54305286 Msa0647960:CDS 40.0%
! TTTAGGTTACCTTGCACCTA+GGG - chr4_3:54305434-54305453 None:intergenic 40.0%
!!! TTTTAGGTTACCTTGCACCT+AGG - chr4_3:54305435-54305454 None:intergenic 40.0%
CAGTCAACCATATCACAACT+GGG - chr4_3:54306249-54306268 None:intergenic 40.0%
CCAAACAAGAGACAAGTCAT+CGG - chr4_3:54306332-54306351 None:intergenic 40.0%
ATCATTAACGACGCTGAAAC+CGG - chr4_3:54306650-54306669 None:intergenic 40.0%
! TGATTTGTACGTCTTCTTGC+AGG + chr4_3:54306708-54306727 Msa0647960:intron 40.0%
ATGTGTGGAGCAAGTATCAA+TGG + chr4_3:54306812-54306831 Msa0647960:intron 40.0%
!! TTGTGGTTTTGCTATGCACT+TGG - chr4_3:54306878-54306897 None:intergenic 40.0%
AGCAAAACCACAATCCAACA+AGG + chr4_3:54306885-54306904 Msa0647960:intron 40.0%
CAAGAAATGTTCACCCAGTT+CGG + chr4_3:54306947-54306966 Msa0647960:intron 40.0%
TGGGGTTAGATTCTAGTGTT+GGG - chr4_3:54307175-54307194 None:intergenic 40.0%
TTGGGGTTAGATTCTAGTGT+TGG - chr4_3:54307176-54307195 None:intergenic 40.0%
!!! TAAGGGTTGGTTCTCTTTTG+GGG - chr4_3:54307193-54307212 None:intergenic 40.0%
!!! CTAAGGGTTGGTTCTCTTTT+GGG - chr4_3:54307194-54307213 None:intergenic 40.0%
! TCACTAAGGACCTTCTCTTT+TGG + chr4_3:54307223-54307242 Msa0647960:intron 40.0%
ATCTTGGAGAACCAAAAGAG+GGG - chr4_3:54307350-54307369 None:intergenic 40.0%
GAATCTTGGAGAACCAAAAG+AGG - chr4_3:54307352-54307371 None:intergenic 40.0%
ACTAAAGGTTGAGGGTCTTT+GGG - chr4_3:54307398-54307417 None:intergenic 40.0%
TACTAAAGGTTGAGGGTCTT+TGG - chr4_3:54307399-54307418 None:intergenic 40.0%
! ACCAAAGGAGGGAACTTTTA+GGG - chr4_3:54307429-54307448 None:intergenic 40.0%
! AACCAAAGGAGGGAACTTTT+AGG - chr4_3:54307430-54307449 None:intergenic 40.0%
ATCTCATGGAAACCAAAGGA+GGG - chr4_3:54307440-54307459 None:intergenic 40.0%
AATCTCATGGAAACCAAAGG+AGG - chr4_3:54307441-54307460 None:intergenic 40.0%
GTGAATCTCATGGAAACCAA+AGG - chr4_3:54307444-54307463 None:intergenic 40.0%
CACCAAGCTTACCCAAAAAA+TGG + chr4_3:54307461-54307480 Msa0647960:intron 40.0%
!!! ACCCATTTTTTGGGTAAGCT+TGG - chr4_3:54307466-54307485 None:intergenic 40.0%
TGTCAAAATCGTGTCACGTT+TGG + chr4_3:54307515-54307534 Msa0647960:intron 40.0%
!! GCAAGTTTTCAGGATAAGGT+TGG - chr4_3:54307561-54307580 None:intergenic 40.0%
! CAAAACGTGACACGATTTTG+GGG - chr4_3:54307612-54307631 None:intergenic 40.0%
! GCAAAACGTGACACGATTTT+GGG - chr4_3:54307613-54307632 None:intergenic 40.0%
ATTACTGGAGAATCATACGC+AGG + chr4_3:54308047-54308066 Msa0647960:CDS 40.0%
!! CAGGGTATTGCTATTGGTAA+TGG + chr4_3:54308309-54308328 Msa0647960:intron 40.0%
! TGAATTGTACGAAGGGTGTA+CGG + chr4_3:54308425-54308444 Msa0647960:intron 40.0%
GAGTAGTGTATGATGCTATG+AGG + chr4_3:54308952-54308971 Msa0647960:CDS 40.0%
TTGATACCATCCTCAAGTAG+TGG - chr4_3:54309014-54309033 None:intergenic 40.0%
TCGCACCAACATATCATGTT+TGG - chr4_3:54309202-54309221 None:intergenic 40.0%
AAACATGATATGTTGGTGCG+AGG + chr4_3:54309201-54309220 Msa0647960:intron 40.0%
AAAAGGACAGAGTTAGGGTT+AGG - chr4_3:54309294-54309313 None:intergenic 40.0%
! AACCCTAACTCTGTCCTTTT+TGG + chr4_3:54309294-54309313 Msa0647960:intron 40.0%
! GGCGGGTCTAAATTTTATCA+CGG + chr4_3:54309315-54309334 Msa0647960:intron 40.0%
AAAAGGACAGAGTTAGGGTT+AGG - chr4_3:54309294-54309313 None:intergenic 40.0%
! AACCCTAACTCTGTCCTTTT+TGG + chr4_3:54309294-54309313 Msa0647960:intron 40.0%
! GGCGGGTCTAAATTTTATCA+CGG + chr4_3:54309315-54309334 Msa0647960:intron 40.0%
! GTTAGTTTCTTACAGTGGTC+AGG + chr4_3:54309745-54309764 Msa0647960:CDS 40.0%
!!! GGAGTTCCATTTTTGGTTGA+TGG + chr4_3:54309793-54309812 Msa0647960:CDS 40.0%
GCAGGAATGTTGTATACCTT+TGG + chr4_3:54309832-54309851 Msa0647960:CDS 40.0%
TAGAAAATAGAGAGGCCCAA+AGG - chr4_3:54309851-54309870 None:intergenic 40.0%
! TGGGCCTCTCTATTTTCTAA+AGG + chr4_3:54309852-54309871 Msa0647960:CDS 40.0%
TTATAGTTGCCCTTTCATCC+AGG - chr4_3:54310054-54310073 None:intergenic 40.0%
AGAAGACTACAAACGGTTAG+AGG - chr4_3:54310350-54310369 None:intergenic 40.0%
! TGTTTTACAGGCAGTCAAAG+TGG - chr4_3:54311112-54311131 None:intergenic 40.0%
GTGAGAACAAACAAGACACA+TGG - chr4_3:54311331-54311350 None:intergenic 40.0%
GAAAAACGGCAAGCTATACA+TGG + chr4_3:54311537-54311556 Msa0647960:intron 40.0%
CTTTAGCCGTTGAAGACTAT+TGG - chr4_3:54311616-54311635 None:intergenic 40.0%
! TTTTGTTGAAAGATGGCACG+AGG + chr4_3:54311677-54311696 Msa0647960:intron 40.0%
CAAATCAACTGCATCAGACT+TGG - chr4_3:54311820-54311839 None:intergenic 40.0%
!! GTCTGATGCAGTTGATTTGA+TGG + chr4_3:54311821-54311840 Msa0647960:intron 40.0%
!! TTTGATGGTGAAGATGTTGG+GGG + chr4_3:54311836-54311855 Msa0647960:intron 40.0%
!!! CATCACTTTTTGGCTAGTTG+AGG + chr4_3:54311907-54311926 Msa0647960:intron 40.0%
TGAAGAGAGTGATATCCACA+AGG - chr4_3:54312040-54312059 None:intergenic 40.0%
CTATGTCACATCCACATATG+TGG - chr4_3:54312075-54312094 None:intergenic 40.0%
ATACTTCAGAGACCTGGATA+TGG + chr4_3:54312100-54312119 Msa0647960:intron 40.0%
! TATCGTCACTTTCATGGAGT+CGG + chr4_3:54312255-54312274 Msa0647960:intron 40.0%
GTAACATACATCATGGCATG+TGG - chr4_3:54312321-54312340 None:intergenic 40.0%
CCAATAGACATATCTGATGG+TGG - chr4_3:54312431-54312450 None:intergenic 40.0%
CCACCATCAGATATGTCTAT+TGG + chr4_3:54312428-54312447 Msa0647960:intron 40.0%
TCGAAGGATCTGATATATGC+CGG + chr4_3:54312491-54312510 Msa0647960:intron 40.0%
TGCAAGATACATGAGATGGT+TGG + chr4_3:54312686-54312705 Msa0647960:intron 40.0%
AACATTCTCCGACAAAGGTA+TGG - chr4_3:54312731-54312750 None:intergenic 40.0%
CACATCATAGACCATGTCTT+AGG + chr4_3:54312847-54312866 Msa0647960:intron 40.0%
AGACCATGTCTTAGGATCAA+TGG + chr4_3:54312855-54312874 Msa0647960:intron 40.0%
GACCATGTCTTAGGATCAAT+GGG + chr4_3:54312856-54312875 Msa0647960:intron 40.0%
GAATACATCTTGGGAGAGTT+TGG + chr4_3:54312900-54312919 Msa0647960:intron 40.0%
TTTGGAAGCAATTCTGCAAG+AGG + chr4_3:54312918-54312937 Msa0647960:intron 40.0%
TTTATCGTCGTAGGTGTGTT+AGG + chr4_3:54312956-54312975 Msa0647960:intron 40.0%
TTATCGTCGTAGGTGTGTTA+GGG + chr4_3:54312957-54312976 Msa0647960:intron 40.0%
CTGAACTGTGTAAGGATTGA+AGG - chr4_3:54313217-54313236 None:intergenic 40.0%
ACTACTCCTACAAAAAGGGA+CGG - chr4_3:54313674-54313693 None:intergenic 40.0%
CTAGTCAACAAAGATGAGAG+AGG + chr4_3:54313987-54314006 Msa0647960:intron 40.0%
CAACAAAGATGAGAGAGGTT+TGG + chr4_3:54313992-54314011 Msa0647960:intron 40.0%
TGATTTCACTCTCATGTGAC+TGG - chr4_3:54314025-54314044 None:intergenic 40.0%
TGCATATTATATGCAGGGGT+CGG + chr4_3:54314495-54314514 Msa0647960:intron 40.0%
! ATATTGAAGTGGGGTGTTTG+TGG - chr4_3:54314529-54314548 None:intergenic 40.0%
TCTCTCCGTCCCAATATTTA+AGG - chr4_3:54315176-54315195 None:intergenic 40.0%
TGCATGGTGCTTGTCAAAAA+AGG - chr4_3:54315399-54315418 None:intergenic 40.0%
TGAATCCAATGCTCCAATTC+AGG + chr4_3:54315419-54315438 Msa0647960:intron 40.0%
GATTTCCTGAATTGGAGCAT+TGG - chr4_3:54315427-54315446 None:intergenic 40.0%
GGTCCTTCTATTGAAGATCT+TGG + chr4_3:54316418-54316437 Msa0647960:intron 40.0%
AGTCAACCATATCACAACTG+GGG - chr4_3:54306248-54306267 None:intergenic 40.0%
CAGTCAACCATATCACAACT+GGG - chr4_3:54306249-54306268 None:intergenic 40.0%
! CTTTTTGTCGACCAACCAAT+TGG + chr4_3:54317358-54317377 Msa0647960:CDS 40.0%
TAAAACCTGTCCCAATTGGT+TGG - chr4_3:54317372-54317391 None:intergenic 40.0%
TAGCTAAAACCTGTCCCAAT+TGG - chr4_3:54317376-54317395 None:intergenic 40.0%
CTAACACCAGTTTCATCATG+TGG - chr4_3:54317421-54317440 None:intergenic 40.0%
!! ATGCTGGGTACTGAATTTCA+GGG - chr4_3:54317860-54317879 None:intergenic 40.0%
!! TATGCTGGGTACTGAATTTC+AGG - chr4_3:54317861-54317880 None:intergenic 40.0%
ATGCAAACTGTGTGTATGCT+GGG - chr4_3:54317875-54317894 None:intergenic 40.0%
AATGCAAACTGTGTGTATGC+TGG - chr4_3:54317876-54317895 None:intergenic 40.0%
GTAGAAGCCACAAAATCTTG+CGG + chr4_3:54317957-54317976 Msa0647960:CDS 40.0%
TGATTATCAGAGAGTGAAGG+TGG + chr4_3:54318246-54318265 Msa0647960:intron 40.0%
ACTGATATCTTGTCCTATGC+TGG + chr4_3:54318312-54318331 Msa0647960:CDS 40.0%
ATTAATGTCATCGCCAGCAT+AGG - chr4_3:54318328-54318347 None:intergenic 40.0%
! GTTAAGGATGCTTTAGGTGT+TGG + chr4_3:54318522-54318541 Msa0647960:CDS 40.0%
! TAAGGATGCTTTAGGTGTTG+GGG + chr4_3:54318524-54318543 Msa0647960:CDS 40.0%
ATTCCTGAACTTCTTGAGGA+TGG + chr4_3:54318624-54318643 Msa0647960:CDS 40.0%
TTCCTGAACTTCTTGAGGAT+GGG + chr4_3:54318625-54318644 Msa0647960:CDS 40.0%
CACGACTAAAATGCTGGATA+TGG + chr4_3:54318839-54318858 Msa0647960:intron 40.0%
!! CGTTGTCCTTTGAGGTTATA+CGG + chr4_3:54318880-54318899 Msa0647960:intron 40.0%
GCTTAACCGTATAACCTCAA+AGG - chr4_3:54318889-54318908 None:intergenic 40.0%
TTCGAATTGGGTTCATGCAA+TGG + chr4_3:54319187-54319206 Msa0647960:CDS 40.0%
GTCAGGTCAAAAACAGTTTG+CGG + chr4_3:54319214-54319233 Msa0647960:intron 40.0%
! TGGACCTCTCTCTTTTCTAA+AGG + chr4_3:54319295-54319314 Msa0647960:intron 40.0%
TGTGATGTGTAACAGGTGAA+TGG + chr4_3:54319401-54319420 Msa0647960:intron 40.0%
GTGATGTGTAACAGGTGAAT+GGG + chr4_3:54319402-54319421 Msa0647960:intron 40.0%
TGATGTGTAACAGGTGAATG+GGG + chr4_3:54319403-54319422 Msa0647960:intron 40.0%
!! CAGCTTTTGGTTGATCCATA+GGG - chr4_3:54319442-54319461 None:intergenic 40.0%
!! AACATCTGAAGTGCAGCTTT+TGG - chr4_3:54319455-54319474 None:intergenic 40.0%
AAAAGCTGCACTTCAGATGT+TGG + chr4_3:54319454-54319473 Msa0647960:CDS 40.0%
ATTAAATGCTTGTCCCGTTG+AGG - chr4_3:54319499-54319518 None:intergenic 40.0%
GTTGGGATCACATAAGTTAG+AGG - chr4_3:54319568-54319587 None:intergenic 40.0%
GGTACGAGAAGTTGCATATG+AGG - chr4_3:54305194-54305213 None:intergenic 45.0%
GCTATCAAGAGTCGTACTTG+TGG - chr4_3:54305976-54305995 None:intergenic 45.0%
TGAATCACGAGACACTCCTA+AGG + chr4_3:54306219-54306238 Msa0647960:CDS 45.0%
ATCACAACTGGGTCATCCTT+AGG - chr4_3:54306238-54306257 None:intergenic 45.0%
AGGATGACCCAGTTGTGATA+TGG + chr4_3:54306239-54306258 Msa0647960:CDS 45.0%
CCAGTCAACCATATCACAAC+TGG - chr4_3:54306250-54306269 None:intergenic 45.0%
CCAGTTGTGATATGGTTGAC+TGG + chr4_3:54306247-54306266 Msa0647960:CDS 45.0%
GTTGTGATATGGTTGACTGG+AGG + chr4_3:54306250-54306269 Msa0647960:CDS 45.0%
! CCGATGACTTGTCTCTTGTT+TGG + chr4_3:54306329-54306348 Msa0647960:CDS 45.0%
!!! GAATGATTTTGGCTGGGACA+AGG + chr4_3:54306351-54306370 Msa0647960:CDS 45.0%
GGTTTCAGCGTCGTTAATGA+TGG + chr4_3:54306649-54306668 Msa0647960:intron 45.0%
CGAACTGGGTGAACATTTCT+TGG - chr4_3:54306949-54306968 None:intergenic 45.0%
!!! GCTAAGGGTTGGTTCTCTTT+TGG - chr4_3:54307195-54307214 None:intergenic 45.0%
!! CCTTTTGGGGAAGATTCATG+GGG - chr4_3:54307305-54307324 None:intergenic 45.0%
!! GCCTTTTGGGGAAGATTCAT+GGG - chr4_3:54307306-54307325 None:intergenic 45.0%
!! TGCCTTTTGGGGAAGATTCA+TGG - chr4_3:54307307-54307326 None:intergenic 45.0%
!!! AAAAGGGTTGGTGCCTTTTG+GGG - chr4_3:54307318-54307337 None:intergenic 45.0%
!!! GAAAAGGGTTGGTGCCTTTT+GGG - chr4_3:54307319-54307338 None:intergenic 45.0%
TCTTGGAGAACCAAAAGAGG+GGG - chr4_3:54307349-54307368 None:intergenic 45.0%
ACCCTAAAAGTTCCCTCCTT+TGG + chr4_3:54307425-54307444 Msa0647960:intron 45.0%
! GGTAAGCTTGGTGAATCTCA+TGG - chr4_3:54307454-54307473 None:intergenic 45.0%
!! CTGGGCAAGTTTTCAGGATA+AGG - chr4_3:54307565-54307584 None:intergenic 45.0%
!!! GACACGATTTTTGGCTTGCT+GGG - chr4_3:54307583-54307602 None:intergenic 45.0%
!!! TGACACGATTTTTGGCTTGC+TGG - chr4_3:54307584-54307603 None:intergenic 45.0%
GCAAGCCAAAAATCGTGTCA+CGG + chr4_3:54307584-54307603 Msa0647960:intron 45.0%
! GGCAAAACGTGACACGATTT+TGG - chr4_3:54307614-54307633 None:intergenic 45.0%
CACCCTGCAAAACATACTCA+CGG + chr4_3:54307633-54307652 Msa0647960:intron 45.0%
! TGCCGTGAGTATGTTTTGCA+GGG - chr4_3:54307638-54307657 None:intergenic 45.0%
! ATGCCGTGAGTATGTTTTGC+AGG - chr4_3:54307639-54307658 None:intergenic 45.0%
GATTCATCAGACACTCAAGG+AGG + chr4_3:54308619-54308638 Msa0647960:intron 45.0%
ATTCCTCCACTACTTGAGGA+TGG + chr4_3:54309005-54309024 Msa0647960:CDS 45.0%
ATACCATCCTCAAGTAGTGG+AGG - chr4_3:54309011-54309030 None:intergenic 45.0%
CGCCAAAAAGGACAGAGTTA+GGG - chr4_3:54309299-54309318 None:intergenic 45.0%
! CCTAACTCTGTCCTTTTTGG+CGG + chr4_3:54309297-54309316 Msa0647960:intron 45.0%
!! CTAACTCTGTCCTTTTTGGC+GGG + chr4_3:54309298-54309317 Msa0647960:intron 45.0%
CGCCAAAAAGGACAGAGTTA+GGG - chr4_3:54309299-54309318 None:intergenic 45.0%
! CCTAACTCTGTCCTTTTTGG+CGG + chr4_3:54309297-54309316 Msa0647960:intron 45.0%
!! CTAACTCTGTCCTTTTTGGC+GGG + chr4_3:54309298-54309317 Msa0647960:intron 45.0%
GTGCAATAGGTTTATGGTGC+TGG + chr4_3:54309978-54309997 Msa0647960:intron 45.0%
! GGTTTATGGTGCTGGACATA+TGG + chr4_3:54309986-54310005 Msa0647960:intron 45.0%
TGCTGGACATATGGTTCCTA+TGG + chr4_3:54309995-54310014 Msa0647960:intron 45.0%
!! GCAACATCAGGTTGATCCAT+AGG - chr4_3:54310014-54310033 None:intergenic 45.0%
! AGCATCTGAAGTGCAACATC+AGG - chr4_3:54310026-54310045 None:intergenic 45.0%
ATGCTTACAGCCTGGATGAA+AGG + chr4_3:54310041-54310060 Msa0647960:intron 45.0%
TGCTTACAGCCTGGATGAAA+GGG + chr4_3:54310042-54310061 Msa0647960:intron 45.0%
AATTTAGGTGTTCGCGCTCA+CGG - chr4_3:54310457-54310476 None:intergenic 45.0%
GACTGCCTGTAAAACAAGAG+TGG + chr4_3:54311116-54311135 Msa0647960:intron 45.0%
TGCCTGTAAAACAAGAGTGG+TGG + chr4_3:54311119-54311138 Msa0647960:intron 45.0%
!!! CTCCACCACTCTTGTTTTAC+AGG - chr4_3:54311124-54311143 None:intergenic 45.0%
! GTAAAACAAGAGTGGTGGAG+AGG + chr4_3:54311124-54311143 Msa0647960:intron 45.0%
TGGAGAGGAATGTAGCACAA+GGG + chr4_3:54311139-54311158 Msa0647960:intron 45.0%
ATATGGTGCTTCTCGAGCTT+CGG - chr4_3:54311207-54311226 None:intergenic 45.0%
! AGATGATGATGAGCAACTGC+AGG + chr4_3:54311258-54311277 Msa0647960:intron 45.0%
ACTGTGTACCATGTTCACGT+AGG + chr4_3:54311349-54311368 Msa0647960:intron 45.0%
TTATCCTGCCTACGTGAACA+TGG - chr4_3:54311360-54311379 None:intergenic 45.0%
GTAGGCAGGATAATGTCAGA+TGG + chr4_3:54311367-54311386 Msa0647960:intron 45.0%
!! TTGATGGTGAAGATGTTGGG+GGG + chr4_3:54311837-54311856 Msa0647960:intron 45.0%
CATTACTCGTCTTTCTCACC+TGG - chr4_3:54311885-54311904 None:intergenic 45.0%
TCAATAGGCAACTGAAGCTG+AGG + chr4_3:54311950-54311969 Msa0647960:intron 45.0%
GTGGATATCACTCTCTTCAC+TGG + chr4_3:54312041-54312060 Msa0647960:intron 45.0%
GCTGAAATACTTCAGAGACC+TGG + chr4_3:54312094-54312113 Msa0647960:intron 45.0%
GGCATATATCAGATCCTTCG+AGG - chr4_3:54312492-54312511 None:intergenic 45.0%
CATAGTCATGTGGATGCCTT+TGG - chr4_3:54312554-54312573 None:intergenic 45.0%
GCATCAATCTCTACACCAGT+AGG - chr4_3:54312669-54312688 None:intergenic 45.0%
CACACCATCCATACCTTTGT+CGG + chr4_3:54312720-54312739 Msa0647960:intron 45.0%
! TTCTCCGACAAAGGTATGGA+TGG - chr4_3:54312727-54312746 None:intergenic 45.0%
CGGAGAATGTTCATATCCTG+AGG + chr4_3:54312740-54312759 Msa0647960:intron 45.0%
TATCCTGAGGCTACATGAGT+TGG + chr4_3:54312753-54312772 Msa0647960:intron 45.0%
CACCCATTGATCCTAAGACA+TGG - chr4_3:54312861-54312880 None:intergenic 45.0%
CATGTCTTAGGATCAATGGG+TGG + chr4_3:54312859-54312878 Msa0647960:intron 45.0%
CTCTCCCAAGATGTATTCCT+GGG - chr4_3:54312898-54312917 None:intergenic 45.0%
ACTCTCCCAAGATGTATTCC+TGG - chr4_3:54312899-54312918 None:intergenic 45.0%
AGCAATTCTGCAAGAGGTTC+AGG + chr4_3:54312924-54312943 Msa0647960:intron 45.0%
GCAATTCTGCAAGAGGTTCA+GGG + chr4_3:54312925-54312944 Msa0647960:intron 45.0%
TATCGTCGTAGGTGTGTTAG+GGG + chr4_3:54312958-54312977 Msa0647960:intron 45.0%
TCCTCTAACATGGCCTTCTA+AGG + chr4_3:54313312-54313331 Msa0647960:intron 45.0%
CCTCTAACATGGCCTTCTAA+GGG + chr4_3:54313313-54313332 Msa0647960:intron 45.0%
CTCTAACATGGCCTTCTAAG+GGG + chr4_3:54313314-54313333 Msa0647960:intron 45.0%
GAGCACGCGAAAAACAACTA+CGG + chr4_3:54313538-54313557 Msa0647960:intron 45.0%
! ACTCCTATATAAAGGTGCGG+AGG + chr4_3:54313911-54313930 Msa0647960:intron 45.0%
! CTCCTATATAAAGGTGCGGA+GGG + chr4_3:54313912-54313931 Msa0647960:intron 45.0%
GAAATCCATTCCCAGATGAG+AGG + chr4_3:54314218-54314237 Msa0647960:intron 45.0%
GATATCCTCTCATCTGGGAA+TGG - chr4_3:54314226-54314245 None:intergenic 45.0%
CTCTCGATATCCTCTCATCT+GGG - chr4_3:54314231-54314250 None:intergenic 45.0%
TCTCTCGATATCCTCTCATC+TGG - chr4_3:54314232-54314251 None:intergenic 45.0%
AGATGAGAGGATATCGAGAG+AGG + chr4_3:54314231-54314250 Msa0647960:intron 45.0%
GCATATTATATGCAGGGGTC+GGG + chr4_3:54314496-54314515 Msa0647960:intron 45.0%
CATATTATATGCAGGGGTCG+GGG + chr4_3:54314497-54314516 Msa0647960:intron 45.0%
TCGACAGTTAACTGCTGATG+AGG - chr4_3:54315052-54315071 None:intergenic 45.0%
!! TGGAGCATTGGATTCATGCA+TGG - chr4_3:54315415-54315434 None:intergenic 45.0%
ACGTGCTCGAGCATTCAATT+TGG - chr4_3:54315602-54315621 None:intergenic 45.0%
CTTCTGCAGTCCTACACTAT+TGG - chr4_3:54315905-54315924 None:intergenic 45.0%
TTCTTCTCGACGATCTTTCC+GGG - chr4_3:54316373-54316392 None:intergenic 45.0%
CTTCTTCTCGACGATCTTTC+CGG - chr4_3:54316374-54316393 None:intergenic 45.0%
GAAGCGAATAGTATCCAGCA+TGG - chr4_3:54316447-54316466 None:intergenic 45.0%
TTCCTCGTTCCAACTCTTCA+AGG + chr4_3:54316464-54316483 Msa0647960:intron 45.0%
TACCTTGAAGAGTTGGAACG+AGG - chr4_3:54316469-54316488 None:intergenic 45.0%
CCAGTCAACCATATCACAAC+TGG - chr4_3:54306250-54306269 None:intergenic 45.0%
CCAGTTGTGATATGGTTGAC+TGG + chr4_3:54306247-54306266 Msa0647960:CDS 45.0%
GTTGTGATATGGTTGACTGG+AGG + chr4_3:54306250-54306269 Msa0647960:CDS 45.0%
GTTTCCTTTGTGAACCCTAG+AGG - chr4_3:54317660-54317679 None:intergenic 45.0%
!! TGGGTACTGAATTTCAGGGT+TGG - chr4_3:54317856-54317875 None:intergenic 45.0%
TTGTGGCTTCTACACACTGT+GGG - chr4_3:54317950-54317969 None:intergenic 45.0%
TTTGTGGCTTCTACACACTG+TGG - chr4_3:54317951-54317970 None:intergenic 45.0%
ATCCCATCCTCAAGAAGTTC+AGG - chr4_3:54318630-54318649 None:intergenic 45.0%
TTGGGCAGGGAATTCGAATT+GGG + chr4_3:54319175-54319194 Msa0647960:intron 45.0%
ATTGGGTTCATGCAATGGAG+TGG + chr4_3:54319192-54319211 Msa0647960:CDS 45.0%
GCAGGATTGTTGAACAGCTA+TGG + chr4_3:54319275-54319294 Msa0647960:intron 45.0%
!! GCAGCTTTTGGTTGATCCAT+AGG - chr4_3:54319443-54319462 None:intergenic 45.0%
CACTTCAGATGTTGGCAAAC+TGG + chr4_3:54319462-54319481 Msa0647960:CDS 45.0%
ATGTTGGCAAACTGGATGCA+AGG + chr4_3:54319470-54319489 Msa0647960:CDS 45.0%
TGTTGGCAAACTGGATGCAA+GGG + chr4_3:54319471-54319490 Msa0647960:CDS 45.0%
!! AAAAAAAAAAAAGTAAAATA+GGG - chr4_3:54308482-54308501 None:intergenic 5.0%
!! AAAAAAAAAAAAAGTAAAAT+AGG - chr4_3:54308483-54308502 None:intergenic 5.0%
!!! ATTAATTTGTTTATTATAAA+TGG + chr4_3:54310223-54310242 Msa0647960:intron 5.0%
!! ATATTTAATTAATCAAAATA+TGG + chr4_3:54310252-54310271 Msa0647960:intron 5.0%
!! TATTTAATTAATCAAAATAT+GGG + chr4_3:54310253-54310272 Msa0647960:intron 5.0%
!! AATATATAAGTATTTAATTA+AGG + chr4_3:54313806-54313825 Msa0647960:intron 5.0%
!! ATATATAAGTATTTAATTAA+GGG + chr4_3:54313807-54313826 Msa0647960:intron 5.0%
TATTCGATTCCTCGTGCCCT+AGG + chr4_3:54305415-54305434 Msa0647960:CDS 50.0%
GTTCCAAGTGCATGCATGCA+TGG + chr4_3:54305623-54305642 Msa0647960:intron 50.0%
ACTCCATGCATGCATGCACT+TGG - chr4_3:54305629-54305648 None:intergenic 50.0%
ATATGGTTGACTGGAGGTCC+CGG + chr4_3:54306256-54306275 Msa0647960:CDS 50.0%
!! AGGTCAAGTTGGACCGAACT+GGG - chr4_3:54306963-54306982 None:intergenic 50.0%
!! TAGGTCAAGTTGGACCGAAC+TGG - chr4_3:54306964-54306983 None:intergenic 50.0%
GGTCCAACTTGACCTACTCT+GGG + chr4_3:54306968-54306987 Msa0647960:intron 50.0%
GTCCAACTTGACCTACTCTG+GGG + chr4_3:54306969-54306988 Msa0647960:intron 50.0%
TCCAACTTGACCTACTCTGG+GGG + chr4_3:54306970-54306989 Msa0647960:intron 50.0%
ATCAATCTCTCCCCCAGAGT+AGG - chr4_3:54306983-54307002 None:intergenic 50.0%
TGGGGAAGATTCATGGGGTT+GGG - chr4_3:54307300-54307319 None:intergenic 50.0%
TTGGGGAAGATTCATGGGGT+TGG - chr4_3:54307301-54307320 None:intergenic 50.0%
CCCCATGAATCTTCCCCAAA+AGG + chr4_3:54307302-54307321 Msa0647960:intron 50.0%
!!! GGAAAAGGGTTGGTGCCTTT+TGG - chr4_3:54307320-54307339 None:intergenic 50.0%
AACCAAAAGAGGGGGCTCTT+GGG - chr4_3:54307341-54307360 None:intergenic 50.0%
! GGATAAGGTTGGTCGTACCT+GGG - chr4_3:54307550-54307569 None:intergenic 50.0%
! AGGATAAGGTTGGTCGTACC+TGG - chr4_3:54307551-54307570 None:intergenic 50.0%
! GGGAACCGTGACACGATTTT+TGG - chr4_3:54307592-54307611 None:intergenic 50.0%
! CGTGAGTATGTTTTGCAGGG+TGG - chr4_3:54307635-54307654 None:intergenic 50.0%
TGAATTCGGGATGCAAGAGC+TGG - chr4_3:54308083-54308102 None:intergenic 50.0%
GTCTCTGTTCGTCTTGTGCA+GGG - chr4_3:54308536-54308555 None:intergenic 50.0%
GGGTATTCCTCCACTACTTG+AGG + chr4_3:54309001-54309020 Msa0647960:CDS 50.0%
GACAGAGTTAGGGTTAGGTC+AGG - chr4_3:54309289-54309308 None:intergenic 50.0%
CCGCCAAAAAGGACAGAGTT+AGG - chr4_3:54309300-54309319 None:intergenic 50.0%
GACAGAGTTAGGGTTAGGTC+AGG - chr4_3:54309289-54309308 None:intergenic 50.0%
CCGCCAAAAAGGACAGAGTT+AGG - chr4_3:54309300-54309319 None:intergenic 50.0%
CACTTCAGATGCTTACAGCC+TGG + chr4_3:54310033-54310052 Msa0647960:intron 50.0%
GTGGAGAGGAATGTAGCACA+AGG + chr4_3:54311138-54311157 Msa0647960:intron 50.0%
! TAGCACAAGGGAGAGTGTGT+AGG + chr4_3:54311151-54311170 Msa0647960:intron 50.0%
! AGCACAAGGGAGAGTGTGTA+GGG + chr4_3:54311152-54311171 Msa0647960:intron 50.0%
!! GAAGCTCGAGAAGCACCATA+TGG + chr4_3:54311206-54311225 Msa0647960:intron 50.0%
!! CTCGAGAAGCACCATATGGA+GGG + chr4_3:54311210-54311229 Msa0647960:intron 50.0%
! TGATGATGAGCAACTGCAGG+AGG + chr4_3:54311261-54311280 Msa0647960:intron 50.0%
TGTACCATGTTCACGTAGGC+AGG + chr4_3:54311353-54311372 Msa0647960:intron 50.0%
ATGAGCGCCTGCTAATCGAT+GGG - chr4_3:54311777-54311796 None:intergenic 50.0%
ACTTGGACAGAGGACCATTG+TGG - chr4_3:54311803-54311822 None:intergenic 50.0%
ACTGCATCAGACTTGGACAG+AGG - chr4_3:54311813-54311832 None:intergenic 50.0%
TTCTCACCTGGTACTCATCC+TGG - chr4_3:54311873-54311892 None:intergenic 50.0%
GCAACTGAAGCTGAGGAAGA+TGG + chr4_3:54311957-54311976 Msa0647960:intron 50.0%
TTGCAGAGATGCGACTGAAG+TGG + chr4_3:54311985-54312004 Msa0647960:intron 50.0%
TGCAGAGATGCGACTGAAGT+GGG + chr4_3:54311986-54312005 Msa0647960:intron 50.0%
TGGCATGAGAGCCACATATG+TGG + chr4_3:54312061-54312080 Msa0647960:intron 50.0%
!! ATCTGATGGTGGTGCTCGTA+CGG - chr4_3:54312420-54312439 None:intergenic 50.0%
GACTCAGATACGAACCTCGA+AGG + chr4_3:54312475-54312494 Msa0647960:intron 50.0%
GGATCTGATATATGCCGGAG+CGG + chr4_3:54312496-54312515 Msa0647960:intron 50.0%
GATCTGATATATGCCGGAGC+GGG + chr4_3:54312497-54312516 Msa0647960:intron 50.0%
GTCATGTGGATGCCTTTGGA+TGG - chr4_3:54312550-54312569 None:intergenic 50.0%
ATCTGTTGTGCGGTCGTCTA+AGG - chr4_3:54312582-54312601 None:intergenic 50.0%
!! GTGTTGGCTGATCTGTTGTG+CGG - chr4_3:54312592-54312611 None:intergenic 50.0%
CTACACCAGTAGGAGCAAGT+TGG - chr4_3:54312659-54312678 None:intergenic 50.0%
GTGATTGTTGTCGAGGAGCA+AGG + chr4_3:54312787-54312806 Msa0647960:intron 50.0%
GTCTTAGGATCAATGGGTGG+TGG + chr4_3:54312862-54312881 Msa0647960:intron 50.0%
TGCAGCCCAGGAATACATCT+TGG + chr4_3:54312890-54312909 Msa0647960:intron 50.0%
GCAGCCCAGGAATACATCTT+GGG + chr4_3:54312891-54312910 Msa0647960:intron 50.0%
ATTCTGCAAGAGGTTCAGGG+AGG + chr4_3:54312928-54312947 Msa0647960:intron 50.0%
TTCTGCAAGAGGTTCAGGGA+GGG + chr4_3:54312929-54312948 Msa0647960:intron 50.0%
GAGGGCAGATTTATCGTCGT+AGG + chr4_3:54312947-54312966 Msa0647960:intron 50.0%
!! TAGGTGTGTTAGGGGTGCTA+GGG + chr4_3:54312966-54312985 Msa0647960:intron 50.0%
CCCTTAGAAGGCCATGTTAG+AGG - chr4_3:54313316-54313335 None:intergenic 50.0%
CACGCGAAAAACAACTACGG+TGG + chr4_3:54313541-54313560 Msa0647960:intron 50.0%
CTCCTACAAAAAGGGACGGA+GGG - chr4_3:54313670-54313689 None:intergenic 50.0%
ACTCCTACAAAAAGGGACGG+AGG - chr4_3:54313671-54313690 None:intergenic 50.0%
CTCCCTCCGCACCTTTATAT+AGG - chr4_3:54313917-54313936 None:intergenic 50.0%
TCACTCTCATGTGACTGGAG+AGG - chr4_3:54314020-54314039 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr4_3:54314102-54314121 Msa0647960:intron 50.0%
!!! TTGGGACGGAGAGAGCATTT+TGG + chr4_3:54315182-54315201 Msa0647960:intron 50.0%
TCTTCTCGACGATCTTTCCG+GGG - chr4_3:54316372-54316391 None:intergenic 50.0%
GAAGATCTTGGTCACCATGC+TGG + chr4_3:54316430-54316449 Msa0647960:intron 50.0%
AGGATGCCCCAGTTGTGATA+TGG + chr4_3:54317093-54317112 Msa0647960:CDS 50.0%
ATATGGTTGACTGGAGGTCC+AGG + chr4_3:54306256-54306275 Msa0647960:CDS 50.0%
GAATGACTATGGTTGGGACC+AGG + chr4_3:54317205-54317224 Msa0647960:CDS 50.0%
ATGTTCCTGCTCTTGCCTCT+AGG + chr4_3:54317642-54317661 Msa0647960:CDS 50.0%
TGTTCCTGCTCTTGCCTCTA+GGG + chr4_3:54317643-54317662 Msa0647960:CDS 50.0%
!! CTTGCCTCTAGGGTTCACAA+AGG + chr4_3:54317653-54317672 Msa0647960:CDS 50.0%
!! GCATTTTAGTCGTGCCCGAT+TGG - chr4_3:54318833-54318852 None:intergenic 50.0%
ATCGGGCACGACTAAAATGC+TGG + chr4_3:54318833-54318852 Msa0647960:intron 50.0%
CTTGGGCAGGGAATTCGAAT+TGG + chr4_3:54319174-54319193 Msa0647960:intron 50.0%
GTTCATGCAATGGAGTGGTC+AGG + chr4_3:54319197-54319216 Msa0647960:CDS 50.0%
!! GTAGTTGATGGCACACAAGC+AGG + chr4_3:54319257-54319276 Msa0647960:intron 50.0%
TGGATGCAAGGGAACCTCAA+CGG + chr4_3:54319482-54319501 Msa0647960:CDS 50.0%
AGCTAGTTCACTGCCGCAAC+CGG - chr4_3:54306278-54306297 None:intergenic 55.0%
GTAGACCAACCCATTGGGAC+CGG + chr4_3:54306628-54306647 Msa0647960:intron 55.0%
TGAAACCGGTCCCAATGGGT+TGG - chr4_3:54306636-54306655 None:intergenic 55.0%
ACGCTGAAACCGGTCCCAAT+GGG - chr4_3:54306640-54306659 None:intergenic 55.0%
CGGTCCAACTTGACCTACTC+TGG + chr4_3:54306967-54306986 Msa0647960:intron 55.0%
TCCCCCAGAGTAGGTCAAGT+TGG - chr4_3:54306974-54306993 None:intergenic 55.0%
TGGGGTTGGGAACACATGAG+TGG - chr4_3:54307287-54307306 None:intergenic 55.0%
AGAGGGGGCTCTTGGGAAAA+GGG - chr4_3:54307334-54307353 None:intergenic 55.0%
AAGAGGGGGCTCTTGGGAAA+AGG - chr4_3:54307335-54307354 None:intergenic 55.0%
! TTCCCAAGAGCCCCCTCTTT+TGG + chr4_3:54307336-54307355 Msa0647960:intron 55.0%
GAACCAAAAGAGGGGGCTCT+TGG - chr4_3:54307342-54307361 None:intergenic 55.0%
AGGTTGAGGGTCTTTGGGTG+AGG - chr4_3:54307393-54307412 None:intergenic 55.0%
!!! GGCTTGCTGGGCAAGTTTTC+AGG - chr4_3:54307571-54307590 None:intergenic 55.0%
GTTCGTCTTGTGCAGGGATC+AGG - chr4_3:54308530-54308549 None:intergenic 55.0%
GGTCTCTGTTCGTCTTGTGC+AGG - chr4_3:54308537-54308556 None:intergenic 55.0%
! AAGGGAGAGTGTGTAGGGCA+GGG + chr4_3:54311157-54311176 Msa0647960:intron 55.0%
GAGCTTCGGAGCCTTCAGTA+TGG - chr4_3:54311193-54311212 None:intergenic 55.0%
!! GCTCGAGAAGCACCATATGG+AGG + chr4_3:54311209-54311228 Msa0647960:intron 55.0%
!! GAGAAGCACCATATGGAGGG+AGG + chr4_3:54311213-54311232 Msa0647960:intron 55.0%
CACCATATGGAGGGAGGAGA+AGG + chr4_3:54311219-54311238 Msa0647960:intron 55.0%
CACCTTCTCCTCCCTCCATA+TGG - chr4_3:54311224-54311243 None:intergenic 55.0%
CATATGGAGGGAGGAGAAGG+TGG + chr4_3:54311222-54311241 Msa0647960:intron 55.0%
TGATGAGCAACTGCAGGAGG+TGG + chr4_3:54311264-54311283 Msa0647960:intron 55.0%
GGATAGCCATCCAATGGTCG+TGG - chr4_3:54311301-54311320 None:intergenic 55.0%
CGACCATTGGATGGCTATCC+AGG + chr4_3:54311301-54311320 Msa0647960:intron 55.0%
CCACCTGGATAGCCATCCAA+TGG - chr4_3:54311307-54311326 None:intergenic 55.0%
CCATTGGATGGCTATCCAGG+TGG + chr4_3:54311304-54311323 Msa0647960:intron 55.0%
AACAAGACACATGGGCCACC+TGG - chr4_3:54311322-54311341 None:intergenic 55.0%
! GCATCTCCCCATCGATTAGC+AGG + chr4_3:54311767-54311786 Msa0647960:intron 55.0%
TGAGCGCCTGCTAATCGATG+GGG - chr4_3:54311776-54311795 None:intergenic 55.0%
CATGAGCGCCTGCTAATCGA+TGG - chr4_3:54311778-54311797 None:intergenic 55.0%
! CATCGATTAGCAGGCGCTCA+TGG + chr4_3:54311776-54311795 Msa0647960:intron 55.0%
AAGATGTTGGGGGGCTGATG+TGG + chr4_3:54311846-54311865 Msa0647960:intron 55.0%
TGTGGTCCAGGATGAGTACC+AGG + chr4_3:54311864-54311883 Msa0647960:intron 55.0%
!! TCTGATGGTGGTGCTCGTAC+GGG - chr4_3:54312419-54312438 None:intergenic 55.0%
! TTGGGCCAACTTGCTCCTAC+TGG + chr4_3:54312651-54312670 Msa0647960:intron 55.0%
CCTCCAACTCATGTAGCCTC+AGG - chr4_3:54312759-54312778 None:intergenic 55.0%
! CCTGAGGCTACATGAGTTGG+AGG + chr4_3:54312756-54312775 Msa0647960:intron 55.0%
! AGGATCAATGGGTGGTGGTG+TGG + chr4_3:54312867-54312886 Msa0647960:intron 55.0%
!! GTAGGTGTGTTAGGGGTGCT+AGG + chr4_3:54312965-54312984 Msa0647960:intron 55.0%
! CTCCCTCCGTCCCTTTTTGT+AGG + chr4_3:54313665-54313684 Msa0647960:intron 55.0%
GTCGACCAACCAATTGGGAC+AGG + chr4_3:54317364-54317383 Msa0647960:CDS 55.0%
TGAACCCTAGAGGCAAGAGC+AGG - chr4_3:54317650-54317669 None:intergenic 55.0%
GTGTAACAGGTGAATGGGGC+AGG + chr4_3:54319407-54319426 Msa0647960:intron 55.0%
GGTGAATGGGGCAGGACATA+TGG + chr4_3:54319415-54319434 Msa0647960:intron 55.0%
GGCAGGACATATGGTCCCTA+TGG + chr4_3:54319424-54319443 Msa0647960:CDS 55.0%
GGATGCAAGGGAACCTCAAC+GGG + chr4_3:54319483-54319502 Msa0647960:CDS 55.0%
TTCCTCGTGCCCTAGGTGCA+AGG + chr4_3:54305422-54305441 Msa0647960:CDS 60.0%
TACCTTGCACCTAGGGCACG+AGG - chr4_3:54305427-54305446 None:intergenic 60.0%
TTGACTGGAGGTCCCGGTTG+CGG + chr4_3:54306262-54306281 Msa0647960:CDS 60.0%
GCTAGTTCACTGCCGCAACC+GGG - chr4_3:54306277-54306296 None:intergenic 60.0%
GACGCTGAAACCGGTCCCAA+TGG - chr4_3:54306641-54306660 None:intergenic 60.0%
GGGGCTCTTGGGAAAAGGGT+TGG - chr4_3:54307330-54307349 None:intergenic 60.0%
!! ACGTTTGGTGCGTACGACCC+AGG + chr4_3:54307530-54307549 Msa0647960:intron 60.0%
GTGTTCGCGCTCACGGTCAA+TGG - chr4_3:54310450-54310469 None:intergenic 60.0%
! CAAGGGAGAGTGTGTAGGGC+AGG + chr4_3:54311156-54311175 Msa0647960:intron 60.0%
! AGGGAGAGTGTGTAGGGCAG+GGG + chr4_3:54311158-54311177 Msa0647960:intron 60.0%
GGGAGGGATCGCCATACTGA+AGG + chr4_3:54311179-54311198 Msa0647960:intron 60.0%
GCAACTGCAGGAGGTGGTAG+AGG + chr4_3:54311270-54311289 Msa0647960:intron 60.0%
ACTGCAGGAGGTGGTAGAGG+TGG + chr4_3:54311273-54311292 Msa0647960:intron 60.0%
AGAGGTGGAGCCACGACCAT+TGG + chr4_3:54311288-54311307 Msa0647960:intron 60.0%
GTGGAGCCACGACCATTGGA+TGG + chr4_3:54311292-54311311 Msa0647960:intron 60.0%
CAGGCGCTCATGGACCACAA+TGG + chr4_3:54311786-54311805 Msa0647960:intron 60.0%
!! CTGATGGTGGTGCTCGTACG+GGG - chr4_3:54312418-54312437 None:intergenic 60.0%
! GGGAGAGTGTGTAGGGCAGG+GGG + chr4_3:54311159-54311178 Msa0647960:intron 65.0%
AGAGTGTGTAGGGCAGGGGG+AGG + chr4_3:54311162-54311181 Msa0647960:intron 65.0%
GAGTGTGTAGGGCAGGGGGA+GGG + chr4_3:54311163-54311182 Msa0647960:intron 65.0%
TTGGGGGGCTGATGTGGTCC+AGG + chr4_3:54311852-54311871 Msa0647960:intron 65.0%
GTGGTGCTCGTACGGGGTCA+TGG - chr4_3:54312412-54312431 None:intergenic 65.0%
AACTGGCGCAGTACCCGCTC+CGG - chr4_3:54312513-54312532 None:intergenic 65.0%
! GAGCGGGTACTGCGCCAGTT+TGG + chr4_3:54312513-54312532 Msa0647960:intron 65.0%
! GTGGTGGTGTGGTGCAGCCC+AGG + chr4_3:54312878-54312897 Msa0647960:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 54305136 54319627 54305136 ID=Msa0647960;Name=Msa0647960
chr4_3 mRNA 54305136 54319627 54305136 ID=Msa0647960-mRNA-1;Parent=Msa0647960;Name=Msa0647960-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.33|0.31|1|0.6|0.56|16|110|742
chr4_3 exon 54305136 54305356 54305136 ID=Msa0647960-mRNA-1:exon:13712;Parent=Msa0647960-mRNA-1
chr4_3 exon 54305372 54305443 54305372 ID=Msa0647960-mRNA-1:exon:13713;Parent=Msa0647960-mRNA-1
chr4_3 exon 54306201 54306372 54306201 ID=Msa0647960-mRNA-1:exon:13714;Parent=Msa0647960-mRNA-1
chr4_3 exon 54308002 54308145 54308002 ID=Msa0647960-mRNA-1:exon:13715;Parent=Msa0647960-mRNA-1
chr4_3 exon 54308312 54308439 54308312 ID=Msa0647960-mRNA-1:exon:13716;Parent=Msa0647960-mRNA-1
chr4_3 exon 54308839 54309080 54308839 ID=Msa0647960-mRNA-1:exon:13717;Parent=Msa0647960-mRNA-1
chr4_3 exon 54309731 54309873 54309731 ID=Msa0647960-mRNA-1:exon:13718;Parent=Msa0647960-mRNA-1
chr4_3 exon 54316322 54316398 54316322 ID=Msa0647960-mRNA-1:exon:13719;Parent=Msa0647960-mRNA-1
chr4_3 exon 54317055 54317226 54317055 ID=Msa0647960-mRNA-1:exon:13720;Parent=Msa0647960-mRNA-1
chr4_3 exon 54317346 54317465 54317346 ID=Msa0647960-mRNA-1:exon:13721;Parent=Msa0647960-mRNA-1
chr4_3 exon 54317569 54317712 54317569 ID=Msa0647960-mRNA-1:exon:13722;Parent=Msa0647960-mRNA-1
chr4_3 exon 54317828 54317978 54317828 ID=Msa0647960-mRNA-1:exon:13723;Parent=Msa0647960-mRNA-1
chr4_3 exon 54318256 54318347 54318256 ID=Msa0647960-mRNA-1:exon:13724;Parent=Msa0647960-mRNA-1
chr4_3 exon 54318441 54318653 54318441 ID=Msa0647960-mRNA-1:exon:13725;Parent=Msa0647960-mRNA-1
chr4_3 exon 54319183 54319218 54319183 ID=Msa0647960-mRNA-1:exon:13726;Parent=Msa0647960-mRNA-1
chr4_3 exon 54319416 54319627 54319416 ID=Msa0647960-mRNA-1:exon:13727;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54305136 54305356 54305136 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54305372 54305443 54305372 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54306201 54306372 54306201 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54308002 54308145 54308002 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54308312 54308439 54308312 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54308839 54309080 54308839 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54309731 54309873 54309731 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54316322 54316398 54316322 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54317055 54317226 54317055 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54317346 54317465 54317346 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54317569 54317712 54317569 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54317828 54317978 54317828 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54318256 54318347 54318256 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54318441 54318653 54318441 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54319183 54319218 54319183 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 CDS 54319416 54319517 54319416 ID=Msa0647960-mRNA-1:cds;Parent=Msa0647960-mRNA-1
chr4_3 three_prime_UTR 54319518 54319627 54319518 ID=Msa0647960-mRNA-1:three_prime_utr;Parent=Msa0647960-mRNA-1
Gene Sequence

>Msa0647960

ATGGGAGTCTCCAAAACCTCTATGTCTCTTTTGTTGTTGTTGATTTTATTTTCTTCCTCATATGCAACTTCTCGTACCACACATAATAATCAACAGATTCCAAAAACATCAACATTTGAAAAGCTTGTAAGAAGCTTTAACTTGTCCCCAAAGGATCCAGTTAATCTAATACATGGCAATCAATCTTTTGATTATGTCCCTGGAAAGATTGTAGAGAAGAATAATACTAATGAAACTGAAAATCTCAATCACCATTTCGGATACTATTCGATTCCTCGTGCCCTAGGTGCAAGGATGTTCTATTTTTTCTTTGAATCACGAGACACTCCTAAGGATGACCCAGTTGTGATATGGTTGACTGGAGGTCCCGGTTGCGGCAGTGAACTAGCTTTGTTTTATGAAAACGGTCCTTTTCATATTGCCGATGACTTGTCTCTTGTTTGGAATGATTTTGGCTGGGACAAGTCTTTTTTCGAGGAGCACCCTGAGTTTCTTAAGAATGACTTTTATATTACTGGAGAATCATACGCAGGACACTATGTTCCAGCTCTTGCATCCCGAATTCATCAAGAAAATAAAGGCAATCCAAAAATACATATAAACCTCAAGGGTATTGCTATTGGTAATGGACTTACAAACCCTAGAATTCAGTACCTTTTTTACACACAATTTGCAGAGGATAATCATTTGATTACATCGGAACAAAGAAAGGATATCGATGATGAATTGTACGAAGGAAAGAAATGTATGGGAGAATTGTGTTATGACTTTTCAAAGTTGGAGAAATTTCTAAATGACCATGAAGTTAGGGGTATTATAGGTGTTGCAAACAAGTTTGTTTCATGCAGTAGAGTAGTGTATGATGCTATGAGGGCAGATTTGATGAAAAGCTTTCATTTGGGTATTCCTCCACTACTTGAGGATGGTATCAAAGTTCTTATATATGCTGGGGAATTTGATTTTATATGCAATTGGCTTGGGAATTATAATTGGGTTAGTTTCTTACAGTGGTCAGGCCAAAAGCAGTTTAAAGAATTCAAAGGAGTTCCATTTTTGGTTGATGGTATTGATATTAAGGAAGCAGGAATGTTGTATACCTTTGGGCCTCTCTATTTTCTAAAGGAATCAGTTAATGTAATACATGGTGATCATTTTGTTGATCATTTTCTCCCCGGAAAGATCGTCGAGAAGAAGTTCTCGTTGTTCTATTTTTTCTTTGAATCAAGAAAAAATTCTAAGGATGCCCCAGTTGTGATATGGTTGACTGGAGGTCCAGGTTGCAGCAGTGAACTAGCTTTGTTTTATGAAAATGGTCCTTTTCATATTGCTGATGATTTGTCTCTTGTATGGAATGACTATGGTTGGGACCAGGCATCAAATATTCTTTTTGTCGACCAACCAATTGGGACAGGTTTTAGCTACACTTCAAATGAAGATGATATTCCACATGATGAAACTGGTGTTAGCAATGATTTGTACGATTTCTTGCAGGAATTTTTCAAGCAACATTCTGAGTTCGTTAAGAATGACTTCTATATTACTGGAGAATCATATGCTGGACACTATGTTCCTGCTCTTGCCTCTAGGGTTCACAAAGGAAACAAAGACAACCAAGGGATTATTATAAATCTCAAGGGTTTTGCTATTGGTAATGGATTGACCAACCCTGAAATTCAGTACCCAGCATACACACAGTTTGCATTAGATAACAAATTGATTACAAAGGAAGAACAAGCTGATATCAACAAGTTGATCCCACAGTGTGTAGAAGCCACAAAATCTTGCGAGAGTGAAGGTGGAGAAAGTTGCTTATCAGCCTTAAATCAATGTCAACAGATATTCACTGATATCTTGTCCTATGCTGGCGATGACATTAATTACTATGACATAAGAAAGAAATGTCAAGGACCATTGTGTTATGATTTCTCAAATGTGGAGACACTTATGAACAAGAAGACAGTTAAGGATGCTTTAGGTGTTGGGGACATTGAGTTTGTTTCATGCAGCAAAGATGTGCATAATGCTATGGTACAAGATTGGATGCAAAACTTTGAAGTTGATATTCCTGAACTTCTTGAGGATGGGATCAAAGGAATTCGAATTGGGTTCATGCAATGGAGTGGTCAGGTGAATGGGGCAGGACATATGGTCCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTGGCAAACTGGATGCAAGGGAACCTCAACGGGACAAGCATTTAA
Protein sequence

>Msa0647960

MGVSKTSMSLLLLLILFSSSYATSRTTHNNQQIPKTSTFEKLVRSFNLSPKDPVNLIHGNQSFDYVPGKIVEKNNTNETENLNHHFGYYSIPRALGARMFYFFFESRDTPKDDPVVIWLTGGPGCGSELALFYENGPFHIADDLSLVWNDFGWDKSFFEEHPEFLKNDFYITGESYAGHYVPALASRIHQENKGNPKIHINLKGIAIGNGLTNPRIQYLFYTQFAEDNHLITSEQRKDIDDELYEGKKCMGELCYDFSKLEKFLNDHEVRGIIGVANKFVSCSRVVYDAMRADLMKSFHLGIPPLLEDGIKVLIYAGEFDFICNWLGNYNWVSFLQWSGQKQFKEFKGVPFLVDGIDIKEAGMLYTFGPLYFLKESVNVIHGDHFVDHFLPGKIVEKKFSLFYFFFESRKNSKDAPVVIWLTGGPGCSSELALFYENGPFHIADDLSLVWNDYGWDQASNILFVDQPIGTGFSYTSNEDDIPHDETGVSNDLYDFLQEFFKQHSEFVKNDFYITGESYAGHYVPALASRVHKGNKDNQGIIINLKGFAIGNGLTNPEIQYPAYTQFALDNKLITKEEQADINKLIPQCVEATKSCESEGGESCLSALNQCQQIFTDILSYAGDDINYYDIRKKCQGPLCYDFSNVETLMNKKTVKDALGVGDIEFVSCSKDVHNAMVQDWMQNFEVDIPELLEDGIKGIRIGFMQWSGQVNGAGHMVPMDQPKAALQMLANWMQGNLNGTSI*