AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0652510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0652510 MtrunA17_Chr4g0046211 99.315 146 1 0 1 146 1 146 4.98e-108 303
Msa0652510 MtrunA17_Chr2g0325101 90.909 143 13 0 1 143 1 143 5.09e-97 277
Msa0652510 MtrunA17_Chr8g0371501 89.510 143 15 0 1 143 1 143 4.37e-96 275
Msa0652510 MtrunA17_Chr4g0037021 90.210 143 14 0 1 143 1 143 1.28e-95 274
Msa0652510 MtrunA17_Chr5g0405791 88.811 143 16 0 1 143 1 143 4.87e-94 270
Msa0652510 MtrunA17_Chr3g0117931 78.169 142 31 0 2 143 4 145 1.83e-84 246
Msa0652510 MtrunA17_Chr6g0486041 79.021 143 30 0 1 143 1 143 4.10e-84 245
Msa0652510 MtrunA17_Chr1g0212521 35.484 124 77 3 6 127 15 137 3.80e-23 90.5
Msa0652510 MtrunA17_Chr4g0030911 35.484 124 77 3 6 127 15 137 4.37e-23 90.1
Msa0652510 MtrunA17_Chr1g0182321 35.484 124 77 3 6 127 15 137 6.54e-23 89.7
Msa0652510 MtrunA17_Chr1g0182301 35.484 124 77 3 6 127 15 137 7.36e-23 89.7
Msa0652510 MtrunA17_Chr1g0199331 36.434 129 76 5 7 131 32 158 1.69e-22 88.2
Msa0652510 MtrunA17_Chr7g0263071 34.677 124 78 3 6 127 15 137 2.04e-22 88.6
Msa0652510 MtrunA17_Chr4g0055651 35.772 123 76 3 6 126 8 129 2.95e-22 87.8
Msa0652510 MtrunA17_Chr7g0250531 34.091 132 84 3 6 135 8 138 8.66e-22 86.7
Msa0652510 MtrunA17_Chr2g0319951 37.500 120 72 3 6 123 13 131 9.32e-22 86.7
Msa0652510 MtrunA17_Chr7g0275991 35.938 128 79 3 8 133 22 148 2.05e-21 86.3
Msa0652510 MtrunA17_Chr8g0335471 36.134 119 73 3 6 122 8 125 2.21e-21 85.5
Msa0652510 MtrunA17_Chr2g0276941 33.793 145 86 4 6 141 15 158 3.08e-21 85.5
Msa0652510 MtrunA17_Chr1g0174281 38.462 117 69 3 8 122 17 132 4.30e-21 85.1
Msa0652510 MtrunA17_Chr8g0381841 37.190 121 73 3 8 126 19 138 4.96e-21 85.1
Msa0652510 MtrunA17_Chr7g0265001 36.752 117 71 2 8 121 18 134 6.33e-21 84.7
Msa0652510 MtrunA17_Chr2g0276931 33.588 131 81 4 1 126 1 130 7.05e-21 84.3
Msa0652510 MtrunA17_Chr3g0112681 37.815 119 71 3 6 122 12 129 8.49e-21 84.3
Msa0652510 MtrunA17_Chr8g0346421 38.655 119 70 3 8 124 28 145 9.99e-21 84.3
Msa0652510 MtrunA17_Chr4g0040781 38.333 120 71 3 6 123 13 131 1.10e-20 84.0
Msa0652510 MtrunA17_Chr2g0315551 37.500 120 72 3 6 123 13 131 1.12e-20 84.0
Msa0652510 MtrunA17_Chr2g0283131 37.500 120 72 3 6 123 13 131 1.23e-20 84.0
Msa0652510 MtrunA17_Chr7g0231131 37.607 117 70 3 8 122 17 132 1.24e-20 84.0
Msa0652510 MtrunA17_Chr4g0046261 37.500 120 72 3 6 123 13 131 1.44e-20 83.6
Msa0652510 MtrunA17_Chr4g0032201 33.103 145 87 4 6 141 12 155 2.16e-20 83.2
Msa0652510 MtrunA17_Chr3g0123821 35.537 121 75 3 8 126 18 137 3.57e-20 82.8
Msa0652510 MtrunA17_Chr3g0123971 36.154 130 80 3 8 135 11 139 1.97e-19 80.5
Msa0652510 MtrunA17_Chr8g0382221 36.154 130 80 3 8 135 11 139 2.23e-19 80.5
Msa0652510 MtrunA17_Chr3g0109721 34.426 122 77 3 8 127 12 132 3.38e-19 79.7
Msa0652510 MtrunA17_Chr6g0458081 33.065 124 80 3 1 122 1 123 3.83e-19 79.7
Msa0652510 MtrunA17_Chr2g0327911 32.800 125 80 3 6 127 15 138 6.61e-19 79.3
Msa0652510 MtrunA17_Chr5g0400131 36.154 130 80 3 8 135 11 139 6.92e-19 79.0
Msa0652510 MtrunA17_Chr8g0384311 33.065 124 79 3 6 126 13 135 7.36e-19 79.0
Msa0652510 MtrunA17_Chr2g0290891 32.258 124 81 3 1 122 1 123 1.45e-18 78.2
Msa0652510 MtrunA17_Chr4g0055081 35.385 130 81 3 8 135 11 139 1.98e-18 77.8
Msa0652510 MtrunA17_Chr8g0390561 33.607 122 78 3 8 127 11 131 2.10e-18 77.8
Msa0652510 MtrunA17_Chr5g0433561 32.787 122 79 3 8 127 12 132 2.69e-18 77.4
Msa0652510 MtrunA17_Chr8g0392931 34.454 119 75 3 6 122 14 131 7.73e-18 76.6
Msa0652510 MtrunA17_Chr3g0130271 30.769 130 86 3 8 134 14 142 7.91e-18 76.3
Msa0652510 MtrunA17_Chr7g0234201 33.333 132 85 3 6 135 13 143 8.15e-18 76.3
Msa0652510 MtrunA17_Chr1g0159481 32.258 124 80 3 6 126 17 139 1.31e-17 75.9
Msa0652510 MtrunA17_Chr1g0180291 33.607 122 77 3 8 126 16 136 2.39e-17 75.1
Msa0652510 MtrunA17_Chr8g0351861 35.294 119 74 3 6 122 16 133 2.56e-17 75.5
Msa0652510 MtrunA17_Chr8g0349711 32.258 124 81 3 1 122 1 123 5.02e-17 74.3
Msa0652510 MtrunA17_Chr1g0189361 33.065 124 80 3 6 127 14 136 9.02e-17 73.9
Msa0652510 MtrunA17_Chr2g0325091 36.667 120 73 3 6 123 11 129 1.04e-16 73.6
Msa0652510 MtrunA17_Chr8g0349681 33.871 124 79 3 1 122 379 501 1.45e-16 75.5
Msa0652510 MtrunA17_Chr8g0349681 31.452 124 82 3 1 122 8 130 2.48e-15 71.6
Msa0652510 MtrunA17_Chr8g0349681 29.839 124 84 3 1 122 170 292 1.71e-14 69.3
Msa0652510 MtrunA17_Chr6g0482721 33.065 124 80 3 6 127 12 134 2.75e-16 72.4
Msa0652510 MtrunA17_Chr2g0331691 34.146 123 74 4 6 122 10 131 1.53e-15 70.5
Msa0652510 MtrunA17_Chr4g0034871 32.520 123 76 3 6 122 8 129 1.73e-15 70.1
Msa0652510 MtrunA17_Chr1g0201121 33.077 130 78 5 1 122 1 129 2.48e-15 69.7
Msa0652510 MtrunA17_Chr7g0214241 31.008 129 86 3 6 132 15 142 3.36e-15 69.7
Msa0652510 MtrunA17_Chr4g0004661 33.077 130 78 5 1 122 57 185 7.51e-15 69.3
Msa0652510 MtrunA17_Chr6g0466301 31.707 123 77 4 6 122 8 129 1.48e-14 67.8
Msa0652510 MtrunA17_Chr6g0465491 31.707 123 77 4 6 122 8 129 1.48e-14 67.8
Msa0652510 MtrunA17_Chr8g0383261 29.861 144 86 5 6 143 12 146 2.00e-14 67.4
Msa0652510 MtrunA17_Chr3g0138121 30.252 119 81 2 7 124 14 131 6.29e-14 66.2
Msa0652510 MtrunA17_Chr3g0138111 30.252 119 81 2 7 124 14 131 6.35e-14 66.2
Msa0652510 MtrunA17_Chr3g0138101 30.252 119 81 2 7 124 14 131 7.05e-14 66.2
Msa0652510 MtrunA17_Chr1g0197331 30.894 123 81 3 8 126 17 139 3.33e-13 64.3
Msa0652510 MtrunA17_Chr7g0259771 27.612 134 70 2 7 127 9 128 6.23e-11 59.3
Msa0652510 MtrunA17_Chr1g0191811 30.328 122 82 3 7 127 17 136 7.63e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0652510 AT3G51300.1 90.210 143 14 0 1 143 1 143 4.64e-96 275
Msa0652510 AT2G17800.2 90.210 143 14 0 1 143 1 143 8.38e-96 275
Msa0652510 AT2G17800.1 90.210 143 14 0 1 143 1 143 8.38e-96 275
Msa0652510 AT1G75840.1 90.210 143 14 0 1 143 1 143 9.04e-96 275
Msa0652510 AT5G45970.1 90.210 143 14 0 1 143 1 143 2.00e-95 274
Msa0652510 AT4G35950.1 89.510 143 15 0 1 143 1 143 4.54e-95 273
Msa0652510 AT1G20090.1 91.429 140 12 0 4 143 3 142 1.30e-94 271
Msa0652510 AT4G35020.1 86.713 143 19 0 1 143 1 143 1.83e-94 271
Msa0652510 AT4G35020.2 86.713 143 19 0 1 143 1 143 1.83e-94 271
Msa0652510 AT4G35020.3 86.713 143 19 0 1 143 1 143 1.83e-94 271
Msa0652510 AT5G62880.2 79.577 142 29 0 2 143 4 145 5.39e-86 249
Msa0652510 AT5G62880.1 79.577 142 29 0 2 143 4 145 1.48e-85 249
Msa0652510 AT3G48040.2 78.169 142 31 0 2 143 4 145 6.49e-84 244
Msa0652510 AT3G48040.1 78.169 142 31 0 2 143 4 145 1.00e-83 244
Msa0652510 AT4G28950.1 76.712 146 34 0 1 146 1 146 3.55e-82 241
Msa0652510 AT2G44690.1 82.707 133 23 0 6 138 18 150 1.93e-80 236
Msa0652510 AT4G35020.4 90.000 120 12 0 1 120 1 120 4.24e-80 233
Msa0652510 AT4G35020.5 90.000 120 12 0 1 120 1 120 4.24e-80 233
Msa0652510 AT3G51290.2 90.000 110 11 0 34 143 635 744 1.43e-67 218
Msa0652510 AT3G46060.2 34.677 124 78 3 6 127 15 137 1.54e-22 89.4
Msa0652510 AT3G46060.3 34.677 124 78 3 6 127 15 137 1.54e-22 89.4
Msa0652510 AT3G46060.1 34.677 124 78 3 6 127 15 137 1.54e-22 89.4
Msa0652510 AT5G59840.1 34.677 124 78 3 6 127 15 137 1.59e-22 89.0
Msa0652510 AT1G16920.1 39.167 120 70 3 6 123 13 131 1.71e-22 89.0
Msa0652510 AT3G54840.2 35.484 124 76 3 7 127 34 156 2.48e-22 88.2
Msa0652510 AT1G09630.1 35.172 145 84 4 6 141 12 155 3.20e-22 88.2
Msa0652510 AT3G54840.1 35.484 124 76 3 7 127 34 156 3.51e-22 87.8
Msa0652510 AT1G02130.1 34.959 123 77 3 6 126 8 129 4.34e-22 87.8
Msa0652510 AT3G53610.2 33.871 124 79 3 6 127 15 137 9.58e-22 87.0
Msa0652510 AT3G53610.3 33.871 124 79 3 6 127 15 137 9.58e-22 87.0
Msa0652510 AT3G53610.1 33.871 124 79 3 6 127 15 137 9.58e-22 87.0
Msa0652510 AT3G12160.1 39.316 117 68 3 8 122 17 132 1.20e-21 87.0
Msa0652510 AT3G54840.3 35.246 122 75 3 9 127 2 122 1.22e-21 85.5
Msa0652510 AT1G06400.1 36.429 140 78 4 6 143 13 143 1.74e-21 86.3
Msa0652510 AT4G35860.1 33.099 142 84 4 1 132 1 141 2.73e-21 85.9
Msa0652510 AT4G19640.2 36.066 122 75 3 8 127 12 132 3.11e-21 84.0
Msa0652510 AT1G73640.1 37.984 129 77 3 6 132 13 140 4.54e-21 85.9
Msa0652510 AT4G18430.1 40.000 120 69 3 6 123 13 131 5.63e-21 85.1
Msa0652510 AT5G45130.1 36.066 122 75 3 8 127 12 132 7.16e-21 84.3
Msa0652510 AT4G19640.3 36.066 122 75 3 8 127 12 132 7.41e-21 84.3
Msa0652510 AT3G15060.1 38.983 118 69 3 8 123 15 131 7.49e-21 84.7
Msa0652510 AT5G45750.1 35.714 140 79 4 6 143 13 143 7.83e-21 84.7
Msa0652510 AT4G19640.1 36.066 122 75 3 8 127 12 132 1.16e-20 84.0
Msa0652510 AT1G18200.1 37.903 124 74 3 6 127 13 135 1.20e-20 84.3
Msa0652510 AT4G17530.1 34.959 123 77 3 6 126 8 129 1.88e-20 83.6
Msa0652510 AT4G18800.1 35.000 140 80 4 6 143 13 143 1.98e-20 83.6
Msa0652510 AT5G47200.1 34.959 123 77 3 6 126 8 129 3.49e-20 82.8
Msa0652510 AT5G45130.2 35.833 120 74 3 10 127 22 140 3.69e-20 82.8
Msa0652510 AT5G60860.1 37.500 120 72 3 6 123 13 131 6.16e-20 82.4
Msa0652510 AT2G44610.1 36.923 130 79 3 8 135 11 139 7.75e-20 82.0
Msa0652510 AT1G28550.1 38.333 120 71 3 6 123 13 131 1.08e-19 81.6
Msa0652510 AT5G10260.1 37.795 127 76 3 8 132 11 136 1.31e-19 81.3
Msa0652510 AT1G07410.1 36.975 119 72 3 6 122 12 129 1.33e-19 81.6
Msa0652510 AT2G22290.1 38.583 127 75 3 8 132 11 136 1.56e-19 81.3
Msa0652510 AT5G59150.1 36.975 119 72 3 6 122 12 129 1.72e-19 81.3
Msa0652510 AT5G47960.1 35.043 117 73 3 8 122 17 132 1.75e-19 81.3
Msa0652510 AT4G39990.1 33.884 121 77 3 8 126 19 138 1.95e-19 81.3
Msa0652510 AT5G65270.1 36.364 121 74 3 8 126 19 138 1.98e-19 81.3
Msa0652510 AT3G11730.1 32.520 123 80 3 6 126 8 129 2.64e-19 80.5
Msa0652510 AT2G33870.1 38.655 119 70 3 6 122 13 130 2.67e-19 80.9
Msa0652510 AT4G17170.1 30.282 142 88 4 1 132 1 141 7.58e-19 79.3
Msa0652510 AT3G46830.1 31.724 145 89 4 6 141 12 155 1.00e-18 79.3
Msa0652510 AT3G46830.2 31.724 145 89 4 6 141 12 155 1.00e-18 79.3
Msa0652510 AT4G39890.1 36.719 128 77 3 8 132 11 137 1.46e-18 78.6
Msa0652510 AT4G17160.1 31.250 128 85 3 1 126 1 127 2.19e-18 78.2
Msa0652510 AT1G43890.3 33.871 124 78 3 6 126 13 135 2.89e-18 77.8
Msa0652510 AT1G43890.1 33.871 124 78 3 6 126 13 135 2.89e-18 77.8
Msa0652510 AT1G43890.2 33.871 124 78 3 6 126 13 135 2.89e-18 77.8
Msa0652510 AT1G01200.1 35.897 117 72 3 8 122 30 145 6.05e-18 77.4
Msa0652510 AT5G64990.1 38.583 127 75 3 8 132 9 134 7.67e-18 76.6
Msa0652510 AT5G03520.1 35.484 124 77 3 6 127 15 137 1.03e-17 76.6
Msa0652510 AT2G43130.1 34.167 120 76 3 6 123 12 130 2.48e-17 75.5
Msa0652510 AT1G05810.1 31.061 132 88 3 6 135 12 142 4.40e-17 75.1
Msa0652510 AT2G31680.1 31.818 132 87 3 6 135 12 142 4.43e-17 75.1
Msa0652510 AT1G05810.2 31.061 132 88 3 6 135 58 188 4.73e-17 75.5
Msa0652510 AT3G07410.1 32.576 132 86 3 6 135 12 142 4.81e-17 74.7
Msa0652510 AT3G18820.1 31.944 144 91 4 6 143 8 150 5.74e-17 74.3
Msa0652510 AT3G09900.1 34.677 124 78 3 6 127 15 137 6.76e-17 74.3
Msa0652510 AT5G03530.2 32.787 122 78 3 8 126 15 135 1.17e-16 73.6
Msa0652510 AT5G03530.1 32.787 122 78 3 8 126 15 135 1.17e-16 73.6
Msa0652510 AT1G22740.1 34.615 130 76 5 1 122 1 129 1.20e-16 73.6
Msa0652510 AT5G47520.1 32.800 125 81 3 2 124 10 133 7.78e-16 71.6
Msa0652510 AT5G55080.1 32.759 116 76 2 8 122 15 129 8.86e-16 71.6
Msa0652510 AT2G21880.1 33.333 123 75 4 6 122 9 130 2.13e-15 70.5
Msa0652510 AT1G49300.2 30.137 146 86 5 6 145 8 143 3.03e-15 69.7
Msa0652510 AT1G49300.1 30.137 146 86 5 6 145 8 143 3.03e-15 69.7
Msa0652510 AT1G52280.1 30.464 151 96 5 1 143 1 150 4.28e-15 69.3
Msa0652510 AT4G09720.1 31.538 130 80 5 1 122 1 129 1.66e-14 67.8
Msa0652510 AT3G16100.1 30.464 151 96 5 1 143 1 150 1.75e-14 67.8
Msa0652510 AT4G09720.4 30.370 135 80 4 1 122 1 134 4.21e-14 67.0
Msa0652510 AT5G20020.1 30.252 119 81 2 7 124 14 131 6.23e-14 66.6
Msa0652510 AT5G55190.1 30.252 119 81 2 7 124 14 131 7.36e-14 66.2
Msa0652510 AT5G20010.1 30.252 119 81 2 7 124 14 131 7.43e-14 66.2
Msa0652510 AT4G09720.3 29.078 141 80 4 1 122 1 140 3.12e-13 64.7
Msa0652510 AT4G35860.2 33.684 95 53 3 47 132 2 95 6.26e-13 62.8
Msa0652510 AT5G27540.1 25.203 123 91 1 3 125 14 135 1.01e-12 64.7
Msa0652510 AT5G27540.2 25.203 123 91 1 3 125 14 135 1.01e-12 64.7
Msa0652510 AT5G59150.2 38.961 77 45 2 47 122 3 78 1.30e-12 62.0
Msa0652510 AT3G63150.1 30.579 121 81 3 7 126 15 133 1.52e-12 64.3
Msa0652510 AT5G03520.2 36.585 82 50 2 47 127 47 127 7.23e-12 60.8
Msa0652510 AT5G39620.1 28.671 143 95 4 7 143 6 147 1.82e-11 59.7
Msa0652510 AT3G09910.5 30.081 123 82 3 8 127 15 136 4.12e-11 58.5
Msa0652510 AT3G09910.4 30.081 123 82 3 8 127 15 136 4.12e-11 58.5
Msa0652510 AT3G09910.3 30.081 123 82 3 8 127 15 136 4.36e-11 58.5
Msa0652510 AT3G09910.1 30.081 123 82 3 8 127 15 136 4.36e-11 58.5
Msa0652510 AT3G09910.2 30.081 123 82 3 8 127 15 136 4.36e-11 58.5

Find 58 sgRNAs with CRISPR-Local

Find 164 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATGTACTTTCCTCTAATT+TGG 0.070213 4_3:-60222461 Msa0652510:three_prime_UTR
ACTCATATTTGAAGTTAAAT+TGG 0.165649 4_3:-60222228 Msa0652510:three_prime_UTR
GTACAGTTAATCTTGGTTTA+TGG 0.192232 4_3:-60223482 Msa0652510:CDS
GTCTTGCGTGGTTTCTTCTT+TGG 0.222979 4_3:+60222488 None:intergenic
GAAGAAGAATGAGTACTTCT+AGG 0.235167 4_3:-60223731 Msa0652510:exon
AAACAAAACATTGAAGCTTA+TGG 0.276228 4_3:+60222375 None:intergenic
AATCAATGATTGTGGTAAAC+AGG 0.279484 4_3:-60222781 Msa0652510:three_prime_UTR
CATGTACTTTCCTCTAATTT+GGG 0.283343 4_3:-60222460 Msa0652510:three_prime_UTR
GTGCTGGTGGGAACAAAATT+AGG 0.286733 4_3:-60223082 Msa0652510:intron
CGTGGTTTCTTCTTTGGCTT+TGG 0.304527 4_3:+60222494 None:intergenic
TTATGAGAACATTTCCAAAA+AGG 0.315063 4_3:-60223235 Msa0652510:intron
TTGTACATGCAAAATAATAT+TGG 0.317076 4_3:+60222818 None:intergenic
TACAGTTAATCTTGGTTTAT+GGG 0.333419 4_3:-60223481 Msa0652510:CDS
TTTCACACACCCCAAATTAG+AGG 0.338522 4_3:+60222450 None:intergenic
AAGAAGATTACAATAGATTA+AGG 0.345982 4_3:-60223320 Msa0652510:CDS
ATATTTATGAAGGAAGTTAA+AGG 0.359117 4_3:+60223818 None:intergenic
TTTGTTCCCACCAGCACAAT+AGG 0.364490 4_3:+60223088 None:intergenic
CTCATATTTGAAGTTAAATT+GGG 0.371027 4_3:-60222227 Msa0652510:three_prime_UTR
ACCAGCACAATAGGCACATT+TGG 0.392174 4_3:+60223097 None:intergenic
GATGGTAGTACAGTTAATCT+TGG 0.405802 4_3:-60223489 Msa0652510:CDS
ATATAAAACTGAAAATGAAA+TGG 0.409851 4_3:+60222411 None:intergenic
GACTTACTCCTAAGTAGTTA+AGG 0.412422 4_3:-60223859 Msa0652510:five_prime_UTR
GGTTTCTTCTTTGGCTTTGG+TGG 0.414729 4_3:+60222497 None:intergenic
GAAGAATTAAAGAAAATGAT+TGG 0.437849 4_3:-60222756 Msa0652510:three_prime_UTR
TTTATTAAATGTGTCACAGT+AGG 0.481832 4_3:-60223708 Msa0652510:CDS
AATTGAAACAATATTTATGA+AGG 0.490999 4_3:+60223808 None:intergenic
TCCAAATGTGCCTATTGTGC+TGG 0.495554 4_3:-60223098 Msa0652510:CDS
AGAATATCATGAAATACAAA+AGG 0.500549 4_3:+60222200 None:intergenic
ATGAAGGAAGTTAAAGGAGG+GGG 0.501256 4_3:+60223824 None:intergenic
GTTGTTATTTGTGTTGCTCC+AGG 0.503224 4_3:+60222896 None:intergenic
CTTGGTTTATGGGATACTGC+AGG 0.516373 4_3:-60223471 Msa0652510:intron
TTAAATTTAATCAATGATTG+TGG 0.519399 4_3:-60222789 Msa0652510:three_prime_UTR
CTGAAATTGTCAAACACAGT+TGG 0.524107 4_3:+60223528 None:intergenic
TTATTAAATGTGTCACAGTA+GGG 0.529835 4_3:-60223707 Msa0652510:CDS
TAAGCAAGCCTTAACTACTT+AGG 0.535499 4_3:+60223851 None:intergenic
TTAGAAACATACTGTGGGAA+AGG 0.550222 4_3:+60223635 None:intergenic
TTTATGAAGGAAGTTAAAGG+AGG 0.550895 4_3:+60223821 None:intergenic
TTATGAAGGAAGTTAAAGGA+GGG 0.552499 4_3:+60223822 None:intergenic
ACAGTAGGGGATGGTGCTGT+TGG 0.554138 4_3:-60223693 Msa0652510:CDS
ATGTACTTTCCTCTAATTTG+GGG 0.557134 4_3:-60222459 Msa0652510:three_prime_UTR
AGAAGAAACCACGCAAGACA+AGG 0.561090 4_3:-60222484 Msa0652510:three_prime_UTR
AAATGTGCCTATTGTGCTGG+TGG 0.561822 4_3:-60223095 Msa0652510:CDS
TCAGCTCCTCTGTAACTCAA+TGG 0.570878 4_3:+60223297 None:intergenic
AACACAAATAACAACTGCTA+AGG 0.570922 4_3:-60222888 Msa0652510:CDS
GTACATGTCCTTGTCTTGCG+TGG 0.584257 4_3:+60222476 None:intergenic
ATCAATGATTGTGGTAAACA+GGG 0.587588 4_3:-60222780 Msa0652510:three_prime_UTR
ACTACCATCCACCACTACAT+TGG 0.600120 4_3:+60223503 None:intergenic
TATGAAGGAAGTTAAAGGAG+GGG 0.600231 4_3:+60223823 None:intergenic
GTGCAGCTCTAAAACACAGC+AGG 0.601225 4_3:-60222715 Msa0652510:intron
TTAAGGCCATTGAGTTACAG+AGG 0.604328 4_3:-60223303 Msa0652510:CDS
TATTAAATGTGTCACAGTAG+GGG 0.613736 4_3:-60223706 Msa0652510:CDS
AAATGTGTCACAGTAGGGGA+TGG 0.616799 4_3:-60223702 Msa0652510:CDS
AAACTGAAAATGAAATGGAG+TGG 0.623149 4_3:+60222416 None:intergenic
CAATTTCAGTGCCAATGTAG+TGG 0.639616 4_3:-60223514 Msa0652510:CDS
AGTGCCAATGTAGTGGTGGA+TGG 0.639752 4_3:-60223507 Msa0652510:CDS
AATGTGCCTATTGTGCTGGT+GGG 0.668934 4_3:-60223094 Msa0652510:CDS
TTTCAGTGCCAATGTAGTGG+TGG 0.671684 4_3:-60223511 Msa0652510:CDS
CTGCAATAAAGATTGCATTG+AGG 0.683742 4_3:-60222520 Msa0652510:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTGATGTTATTTAT+TGG - chr4_3:60222688-60222707 Msa0652510:intron 10.0%
!!! ATTTTTTTGATGTTATTTAT+TGG - chr4_3:60222688-60222707 Msa0652510:intron 10.0%
!! AATTGAAACAATATTTATGA+AGG + chr4_3:60222250-60222269 None:intergenic 15.0%
!! TCTTATATATCTAACTTATA+AGG + chr4_3:60222866-60222885 None:intergenic 15.0%
!! TTAAATTTAATCAATGATTG+TGG - chr4_3:60223266-60223285 Msa0652510:CDS 15.0%
!! ATATAAAACTGAAAATGAAA+TGG + chr4_3:60223647-60223666 None:intergenic 15.0%
!! AATTGAAACAATATTTATGA+AGG + chr4_3:60222250-60222269 None:intergenic 15.0%
!! TCTTATATATCTAACTTATA+AGG + chr4_3:60222866-60222885 None:intergenic 15.0%
!! TTAAATTTAATCAATGATTG+TGG - chr4_3:60223266-60223285 Msa0652510:CDS 15.0%
!! ATATAAAACTGAAAATGAAA+TGG + chr4_3:60223647-60223666 None:intergenic 15.0%
!! ATATTTATGAAGGAAGTTAA+AGG + chr4_3:60222240-60222259 None:intergenic 20.0%
!! AAGAAGATTACAATAGATTA+AGG - chr4_3:60222735-60222754 Msa0652510:three_prime_UTR 20.0%
!! ATTACTGTCAACTTATAATA+TGG + chr4_3:60223031-60223050 None:intergenic 20.0%
!! TTGTACATGCAAAATAATAT+TGG + chr4_3:60223240-60223259 None:intergenic 20.0%
!!! TATTATTTTGCATGTACAAA+CGG - chr4_3:60223241-60223260 Msa0652510:CDS 20.0%
!! GAAGAATTAAAGAAAATGAT+TGG - chr4_3:60223299-60223318 Msa0652510:CDS 20.0%
!! TTCAAAAAATACTTCACAAT+TGG + chr4_3:60223459-60223478 None:intergenic 20.0%
!!! ACTCATATTTGAAGTTAAAT+TGG - chr4_3:60223827-60223846 Msa0652510:five_prime_UTR 20.0%
!!! CTCATATTTGAAGTTAAATT+GGG - chr4_3:60223828-60223847 Msa0652510:five_prime_UTR 20.0%
!! AGAATATCATGAAATACAAA+AGG + chr4_3:60223858-60223877 None:intergenic 20.0%
!! ATATTTATGAAGGAAGTTAA+AGG + chr4_3:60222240-60222259 None:intergenic 20.0%
!! AAGAAGATTACAATAGATTA+AGG - chr4_3:60222735-60222754 Msa0652510:three_prime_UTR 20.0%
!! ATTACTGTCAACTTATAATA+TGG + chr4_3:60223031-60223050 None:intergenic 20.0%
!! TTGTACATGCAAAATAATAT+TGG + chr4_3:60223240-60223259 None:intergenic 20.0%
!!! TATTATTTTGCATGTACAAA+CGG - chr4_3:60223241-60223260 Msa0652510:CDS 20.0%
!! GAAGAATTAAAGAAAATGAT+TGG - chr4_3:60223299-60223318 Msa0652510:CDS 20.0%
!! TTCAAAAAATACTTCACAAT+TGG + chr4_3:60223459-60223478 None:intergenic 20.0%
!!! ACTCATATTTGAAGTTAAAT+TGG - chr4_3:60223827-60223846 Msa0652510:five_prime_UTR 20.0%
!!! CTCATATTTGAAGTTAAATT+GGG - chr4_3:60223828-60223847 Msa0652510:five_prime_UTR 20.0%
!! AGAATATCATGAAATACAAA+AGG + chr4_3:60223858-60223877 None:intergenic 20.0%
!! CTTCTTCTTTTTCTAAACTT+AGG + chr4_3:60222299-60222318 None:intergenic 25.0%
! TTTATTAAATGTGTCACAGT+AGG - chr4_3:60222347-60222366 Msa0652510:three_prime_UTR 25.0%
! TTATTAAATGTGTCACAGTA+GGG - chr4_3:60222348-60222367 Msa0652510:three_prime_UTR 25.0%
! ACTATTTAGAAACATACTGT+GGG + chr4_3:60222428-60222447 None:intergenic 25.0%
! AACTATTTAGAAACATACTG+TGG + chr4_3:60222429-60222448 None:intergenic 25.0%
! TACAGTTAATCTTGGTTTAT+GGG - chr4_3:60222574-60222593 Msa0652510:intron 25.0%
! AAAAGTAAAACATAGAGCTT+TGG + chr4_3:60222622-60222641 None:intergenic 25.0%
!!! ATCAATGTAAAGTTTTGATG+AGG - chr4_3:60222650-60222669 Msa0652510:intron 25.0%
! TTATGAGAACATTTCCAAAA+AGG - chr4_3:60222820-60222839 Msa0652510:three_prime_UTR 25.0%
!! ATAGAGGAAAAAAACCTTTT+TGG + chr4_3:60222837-60222856 None:intergenic 25.0%
! ACTTATAAGGTAATGTATAG+AGG + chr4_3:60222853-60222872 None:intergenic 25.0%
!! TGATTGAAATGTTACTTAGA+TGG + chr4_3:60223008-60223027 None:intergenic 25.0%
!!! AAATTACAGCACTTCTTTTT+TGG - chr4_3:60223368-60223387 Msa0652510:intron 25.0%
! AAACAAAACATTGAAGCTTA+TGG + chr4_3:60223683-60223702 None:intergenic 25.0%
! AAAAAGAGTCTTAAGTGTTA+TGG - chr4_3:60223730-60223749 Msa0652510:exon 25.0%
!!! TTTTTTCTTTTTCTGTGTCT+AGG - chr4_3:60223785-60223804 Msa0652510:five_prime_UTR 25.0%
!! CTTCTTCTTTTTCTAAACTT+AGG + chr4_3:60222299-60222318 None:intergenic 25.0%
! TTTATTAAATGTGTCACAGT+AGG - chr4_3:60222347-60222366 Msa0652510:three_prime_UTR 25.0%
! TTATTAAATGTGTCACAGTA+GGG - chr4_3:60222348-60222367 Msa0652510:three_prime_UTR 25.0%
! ACTATTTAGAAACATACTGT+GGG + chr4_3:60222428-60222447 None:intergenic 25.0%
! AACTATTTAGAAACATACTG+TGG + chr4_3:60222429-60222448 None:intergenic 25.0%
! TACAGTTAATCTTGGTTTAT+GGG - chr4_3:60222574-60222593 Msa0652510:intron 25.0%
! AAAAGTAAAACATAGAGCTT+TGG + chr4_3:60222622-60222641 None:intergenic 25.0%
!!! ATCAATGTAAAGTTTTGATG+AGG - chr4_3:60222650-60222669 Msa0652510:intron 25.0%
! TTATGAGAACATTTCCAAAA+AGG - chr4_3:60222820-60222839 Msa0652510:three_prime_UTR 25.0%
!! ATAGAGGAAAAAAACCTTTT+TGG + chr4_3:60222837-60222856 None:intergenic 25.0%
! ACTTATAAGGTAATGTATAG+AGG + chr4_3:60222853-60222872 None:intergenic 25.0%
!! TGATTGAAATGTTACTTAGA+TGG + chr4_3:60223008-60223027 None:intergenic 25.0%
!!! AAATTACAGCACTTCTTTTT+TGG - chr4_3:60223368-60223387 Msa0652510:intron 25.0%
! AAACAAAACATTGAAGCTTA+TGG + chr4_3:60223683-60223702 None:intergenic 25.0%
! AAAAAGAGTCTTAAGTGTTA+TGG - chr4_3:60223730-60223749 Msa0652510:exon 25.0%
!!! TTTTTTCTTTTTCTGTGTCT+AGG - chr4_3:60223785-60223804 Msa0652510:five_prime_UTR 25.0%
TTATGAAGGAAGTTAAAGGA+GGG + chr4_3:60222236-60222255 None:intergenic 30.0%
TTTATGAAGGAAGTTAAAGG+AGG + chr4_3:60222237-60222256 None:intergenic 30.0%
TATTAAATGTGTCACAGTAG+GGG - chr4_3:60222349-60222368 Msa0652510:three_prime_UTR 30.0%
!!! TCTTGTGCTTTTTCTATGAT+AGG - chr4_3:60222496-60222515 Msa0652510:three_prime_UTR 30.0%
GTACAGTTAATCTTGGTTTA+TGG - chr4_3:60222573-60222592 Msa0652510:intron 30.0%
ATTTATTGGTGTGAATTGTG+TGG - chr4_3:60222702-60222721 Msa0652510:intron 30.0%
!!! CATTTTTAGTTGACTAACAG+TGG - chr4_3:60222911-60222930 Msa0652510:CDS 30.0%
! CAATTTTTCATTGATCATCC+TGG - chr4_3:60223141-60223160 Msa0652510:intron 30.0%
AACACAAATAACAACTGCTA+AGG - chr4_3:60223167-60223186 Msa0652510:intron 30.0%
AATCAATGATTGTGGTAAAC+AGG - chr4_3:60223274-60223293 Msa0652510:CDS 30.0%
ATCAATGATTGTGGTAAACA+GGG - chr4_3:60223275-60223294 Msa0652510:CDS 30.0%
!!! GTTTTGTTTACAGAATGTGA+AGG - chr4_3:60223500-60223519 Msa0652510:CDS 30.0%
ACATGTACTTTCCTCTAATT+TGG - chr4_3:60223594-60223613 Msa0652510:intron 30.0%
CATGTACTTTCCTCTAATTT+GGG - chr4_3:60223595-60223614 Msa0652510:intron 30.0%
ATGTACTTTCCTCTAATTTG+GGG - chr4_3:60223596-60223615 Msa0652510:intron 30.0%
AAACTGAAAATGAAATGGAG+TGG + chr4_3:60223642-60223661 None:intergenic 30.0%
TTATGAAGGAAGTTAAAGGA+GGG + chr4_3:60222236-60222255 None:intergenic 30.0%
TTTATGAAGGAAGTTAAAGG+AGG + chr4_3:60222237-60222256 None:intergenic 30.0%
TATTAAATGTGTCACAGTAG+GGG - chr4_3:60222349-60222368 Msa0652510:three_prime_UTR 30.0%
!!! TCTTGTGCTTTTTCTATGAT+AGG - chr4_3:60222496-60222515 Msa0652510:three_prime_UTR 30.0%
GTACAGTTAATCTTGGTTTA+TGG - chr4_3:60222573-60222592 Msa0652510:intron 30.0%
ATTTATTGGTGTGAATTGTG+TGG - chr4_3:60222702-60222721 Msa0652510:intron 30.0%
!!! CATTTTTAGTTGACTAACAG+TGG - chr4_3:60222911-60222930 Msa0652510:CDS 30.0%
! CAATTTTTCATTGATCATCC+TGG - chr4_3:60223141-60223160 Msa0652510:intron 30.0%
AACACAAATAACAACTGCTA+AGG - chr4_3:60223167-60223186 Msa0652510:intron 30.0%
AATCAATGATTGTGGTAAAC+AGG - chr4_3:60223274-60223293 Msa0652510:CDS 30.0%
ATCAATGATTGTGGTAAACA+GGG - chr4_3:60223275-60223294 Msa0652510:CDS 30.0%
!!! GTTTTGTTTACAGAATGTGA+AGG - chr4_3:60223500-60223519 Msa0652510:CDS 30.0%
ACATGTACTTTCCTCTAATT+TGG - chr4_3:60223594-60223613 Msa0652510:intron 30.0%
CATGTACTTTCCTCTAATTT+GGG - chr4_3:60223595-60223614 Msa0652510:intron 30.0%
ATGTACTTTCCTCTAATTTG+GGG - chr4_3:60223596-60223615 Msa0652510:intron 30.0%
AAACTGAAAATGAAATGGAG+TGG + chr4_3:60223642-60223661 None:intergenic 30.0%
GACTTACTCCTAAGTAGTTA+AGG - chr4_3:60222196-60222215 Msa0652510:three_prime_UTR 35.0%
TAAGCAAGCCTTAACTACTT+AGG + chr4_3:60222207-60222226 None:intergenic 35.0%
TATGAAGGAAGTTAAAGGAG+GGG + chr4_3:60222235-60222254 None:intergenic 35.0%
GAAGAAGAATGAGTACTTCT+AGG - chr4_3:60222324-60222343 Msa0652510:three_prime_UTR 35.0%
TTAGAAACATACTGTGGGAA+AGG + chr4_3:60222423-60222442 None:intergenic 35.0%
CTGAAATTGTCAAACACAGT+TGG + chr4_3:60222530-60222549 None:intergenic 35.0%
GATGGTAGTACAGTTAATCT+TGG - chr4_3:60222566-60222585 Msa0652510:intron 35.0%
CTGCAATAAAGATTGCATTG+AGG - chr4_3:60223535-60223554 Msa0652510:CDS 35.0%
! TTTCTTTTTCTGTGTCTAGG+TGG - chr4_3:60223788-60223807 Msa0652510:five_prime_UTR 35.0%
GACTTACTCCTAAGTAGTTA+AGG - chr4_3:60222196-60222215 Msa0652510:three_prime_UTR 35.0%
TAAGCAAGCCTTAACTACTT+AGG + chr4_3:60222207-60222226 None:intergenic 35.0%
TATGAAGGAAGTTAAAGGAG+GGG + chr4_3:60222235-60222254 None:intergenic 35.0%
GAAGAAGAATGAGTACTTCT+AGG - chr4_3:60222324-60222343 Msa0652510:three_prime_UTR 35.0%
TTAGAAACATACTGTGGGAA+AGG + chr4_3:60222423-60222442 None:intergenic 35.0%
CTGAAATTGTCAAACACAGT+TGG + chr4_3:60222530-60222549 None:intergenic 35.0%
GATGGTAGTACAGTTAATCT+TGG - chr4_3:60222566-60222585 Msa0652510:intron 35.0%
CTGCAATAAAGATTGCATTG+AGG - chr4_3:60223535-60223554 Msa0652510:CDS 35.0%
! TTTCTTTTTCTGTGTCTAGG+TGG - chr4_3:60223788-60223807 Msa0652510:five_prime_UTR 35.0%
ATGAAGGAAGTTAAAGGAGG+GGG + chr4_3:60222234-60222253 None:intergenic 40.0%
CAATTTCAGTGCCAATGTAG+TGG - chr4_3:60222541-60222560 Msa0652510:three_prime_UTR 40.0%
! GTGTGAATTGTGTGGATTAC+AGG - chr4_3:60222710-60222729 Msa0652510:intron 40.0%
TTAAGGCCATTGAGTTACAG+AGG - chr4_3:60222752-60222771 Msa0652510:three_prime_UTR 40.0%
TCGCAAATCTGTGCATACAT+AGG + chr4_3:60223112-60223131 None:intergenic 40.0%
!! GTTGTTATTTGTGTTGCTCC+AGG + chr4_3:60223162-60223181 None:intergenic 40.0%
TTTCACACACCCCAAATTAG+AGG + chr4_3:60223608-60223627 None:intergenic 40.0%
ATGAAGGAAGTTAAAGGAGG+GGG + chr4_3:60222234-60222253 None:intergenic 40.0%
CAATTTCAGTGCCAATGTAG+TGG - chr4_3:60222541-60222560 Msa0652510:three_prime_UTR 40.0%
! GTGTGAATTGTGTGGATTAC+AGG - chr4_3:60222710-60222729 Msa0652510:intron 40.0%
TTAAGGCCATTGAGTTACAG+AGG - chr4_3:60222752-60222771 Msa0652510:three_prime_UTR 40.0%
TCGCAAATCTGTGCATACAT+AGG + chr4_3:60223112-60223131 None:intergenic 40.0%
!! GTTGTTATTTGTGTTGCTCC+AGG + chr4_3:60223162-60223181 None:intergenic 40.0%
TTTCACACACCCCAAATTAG+AGG + chr4_3:60223608-60223627 None:intergenic 40.0%
AAATGTGTCACAGTAGGGGA+TGG - chr4_3:60222353-60222372 Msa0652510:three_prime_UTR 45.0%
TTTCAGTGCCAATGTAGTGG+TGG - chr4_3:60222544-60222563 Msa0652510:three_prime_UTR 45.0%
ACTACCATCCACCACTACAT+TGG + chr4_3:60222555-60222574 None:intergenic 45.0%
CTTGGTTTATGGGATACTGC+AGG - chr4_3:60222584-60222603 Msa0652510:intron 45.0%
TCAGCTCCTCTGTAACTCAA+TGG + chr4_3:60222761-60222780 None:intergenic 45.0%
TCCAAATGTGCCTATTGTGC+TGG - chr4_3:60222957-60222976 Msa0652510:intron 45.0%
ACCAGCACAATAGGCACATT+TGG + chr4_3:60222961-60222980 None:intergenic 45.0%
AAATGTGCCTATTGTGCTGG+TGG - chr4_3:60222960-60222979 Msa0652510:intron 45.0%
! AATGTGCCTATTGTGCTGGT+GGG - chr4_3:60222961-60222980 Msa0652510:intron 45.0%
TTTGTTCCCACCAGCACAAT+AGG + chr4_3:60222970-60222989 None:intergenic 45.0%
! GTGCTGGTGGGAACAAAATT+AGG - chr4_3:60222973-60222992 Msa0652510:intron 45.0%
!! GGTTTCTTCTTTGGCTTTGG+TGG + chr4_3:60223561-60223580 None:intergenic 45.0%
! CGTGGTTTCTTCTTTGGCTT+TGG + chr4_3:60223564-60223583 None:intergenic 45.0%
GTCTTGCGTGGTTTCTTCTT+TGG + chr4_3:60223570-60223589 None:intergenic 45.0%
AGAAGAAACCACGCAAGACA+AGG - chr4_3:60223571-60223590 Msa0652510:intron 45.0%
AAATGTGTCACAGTAGGGGA+TGG - chr4_3:60222353-60222372 Msa0652510:three_prime_UTR 45.0%
TTTCAGTGCCAATGTAGTGG+TGG - chr4_3:60222544-60222563 Msa0652510:three_prime_UTR 45.0%
ACTACCATCCACCACTACAT+TGG + chr4_3:60222555-60222574 None:intergenic 45.0%
CTTGGTTTATGGGATACTGC+AGG - chr4_3:60222584-60222603 Msa0652510:intron 45.0%
TCAGCTCCTCTGTAACTCAA+TGG + chr4_3:60222761-60222780 None:intergenic 45.0%
TCCAAATGTGCCTATTGTGC+TGG - chr4_3:60222957-60222976 Msa0652510:intron 45.0%
ACCAGCACAATAGGCACATT+TGG + chr4_3:60222961-60222980 None:intergenic 45.0%
AAATGTGCCTATTGTGCTGG+TGG - chr4_3:60222960-60222979 Msa0652510:intron 45.0%
! AATGTGCCTATTGTGCTGGT+GGG - chr4_3:60222961-60222980 Msa0652510:intron 45.0%
TTTGTTCCCACCAGCACAAT+AGG + chr4_3:60222970-60222989 None:intergenic 45.0%
! GTGCTGGTGGGAACAAAATT+AGG - chr4_3:60222973-60222992 Msa0652510:intron 45.0%
!! GGTTTCTTCTTTGGCTTTGG+TGG + chr4_3:60223561-60223580 None:intergenic 45.0%
! CGTGGTTTCTTCTTTGGCTT+TGG + chr4_3:60223564-60223583 None:intergenic 45.0%
GTCTTGCGTGGTTTCTTCTT+TGG + chr4_3:60223570-60223589 None:intergenic 45.0%
AGAAGAAACCACGCAAGACA+AGG - chr4_3:60223571-60223590 Msa0652510:intron 45.0%
! AGTGCCAATGTAGTGGTGGA+TGG - chr4_3:60222548-60222567 Msa0652510:intron 50.0%
!! GTGCAGCTCTAAAACACAGC+AGG - chr4_3:60223340-60223359 Msa0652510:intron 50.0%
GTACATGTCCTTGTCTTGCG+TGG + chr4_3:60223582-60223601 None:intergenic 50.0%
! AGTGCCAATGTAGTGGTGGA+TGG - chr4_3:60222548-60222567 Msa0652510:intron 50.0%
!! GTGCAGCTCTAAAACACAGC+AGG - chr4_3:60223340-60223359 Msa0652510:intron 50.0%
GTACATGTCCTTGTCTTGCG+TGG + chr4_3:60223582-60223601 None:intergenic 50.0%
!! ACAGTAGGGGATGGTGCTGT+TGG - chr4_3:60222362-60222381 Msa0652510:three_prime_UTR 55.0%
!! ACAGTAGGGGATGGTGCTGT+TGG - chr4_3:60222362-60222381 Msa0652510:three_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 60222192 60223885 60222192 ID=Msa0652510;Name=Msa0652510
chr4_3 mRNA 60222192 60223885 60222192 ID=Msa0652510-mRNA-1;Parent=Msa0652510;Name=Msa0652510-mRNA-1;_AED=0.14;_eAED=0.14;_QI=140|1|1|1|1|0.83|6|531|146
chr4_3 exon 60222192 60222564 60222192 ID=Msa0652510-mRNA-1:exon:16365;Parent=Msa0652510-mRNA-1
chr4_3 exon 60222716 60222953 60222716 ID=Msa0652510-mRNA-1:exon:16364;Parent=Msa0652510-mRNA-1
chr4_3 exon 60223083 60223146 60223083 ID=Msa0652510-mRNA-1:exon:16363;Parent=Msa0652510-mRNA-1
chr4_3 exon 60223236 60223345 60223236 ID=Msa0652510-mRNA-1:exon:16362;Parent=Msa0652510-mRNA-1
chr4_3 exon 60223472 60223559 60223472 ID=Msa0652510-mRNA-1:exon:16361;Parent=Msa0652510-mRNA-1
chr4_3 exon 60223647 60223885 60223647 ID=Msa0652510-mRNA-1:exon:16360;Parent=Msa0652510-mRNA-1
chr4_3 five_prime_UTR 60223746 60223885 60223746 ID=Msa0652510-mRNA-1:five_prime_utr;Parent=Msa0652510-mRNA-1
chr4_3 CDS 60223647 60223745 60223647 ID=Msa0652510-mRNA-1:cds;Parent=Msa0652510-mRNA-1
chr4_3 CDS 60223472 60223559 60223472 ID=Msa0652510-mRNA-1:cds;Parent=Msa0652510-mRNA-1
chr4_3 CDS 60223236 60223345 60223236 ID=Msa0652510-mRNA-1:cds;Parent=Msa0652510-mRNA-1
chr4_3 CDS 60223083 60223146 60223083 ID=Msa0652510-mRNA-1:cds;Parent=Msa0652510-mRNA-1
chr4_3 CDS 60222874 60222953 60222874 ID=Msa0652510-mRNA-1:cds;Parent=Msa0652510-mRNA-1
chr4_3 three_prime_UTR 60222716 60222873 60222716 ID=Msa0652510-mRNA-1:three_prime_utr;Parent=Msa0652510-mRNA-1
chr4_3 three_prime_UTR 60222192 60222564 60222192 ID=Msa0652510-mRNA-1:three_prime_utr;Parent=Msa0652510-mRNA-1
Gene Sequence

>Msa0652510

ATGAGTACTTCTAGGTTTATTAAATGTGTCACAGTAGGGGATGGTGCTGTTGGAAAGACTTGCATGCTTATATCATATACAAGCAATACCTTTCCCACAGATTATGTTCCAACTGTGTTTGACAATTTCAGTGCCAATGTAGTGGTGGATGGTAGTACAGTTAATCTTGGTTTATGGGATACTGCAGGACAAGAAGATTACAATAGATTAAGGCCATTGAGTTACAGAGGAGCTGATGTGTTTTTGTTGTGTTTTTCTCTCATTAGTAAAGCTAGTTATGAGAACATTTCCAAAAAGTGGATATCTGAGCTGAGACATTATGCTCCAAATGTGCCTATTGTGCTGGTGGGAACAAAATTAGATTTGCGAGACGACAAGCAATTTTTCATTGATCATCCTGGAGCAACACAAATAACAACTGCTAAGGCATGTCGTCGATAA
Protein sequence

>Msa0652510

MSTSRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLCFSLISKASYENISKKWISELRHYAPNVPIVLVGTKLDLRDDKQFFIDHPGATQITTAKACRR*