AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0655060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0655060 MtrunA17_Chr4g0052381 97.500 160 4 0 1 160 383 542 1.76e-110 328
Msa0655060 MtrunA17_Chr4g0052361 96.250 160 6 0 1 160 366 525 6.23e-108 321
Msa0655060 MtrunA17_Chr1g0178401 49.367 158 80 0 1 158 273 430 3.20e-50 169
Msa0655060 MtrunA17_Chr3g0121921 48.734 158 81 0 1 158 316 473 1.35e-49 168
Msa0655060 MtrunA17_Chr7g0220551 46.875 160 85 0 1 160 646 805 6.85e-48 165
Msa0655060 MtrunA17_Chr7g0255871 45.000 160 88 0 1 160 349 508 1.84e-46 160
Msa0655060 MtrunA17_Chr8g0346451 44.025 159 89 0 1 159 285 443 5.21e-46 156
Msa0655060 MtrunA17_Chr5g0445141 45.625 160 86 1 1 160 588 746 1.17e-45 158
Msa0655060 MtrunA17_Chr3g0139361 41.875 160 93 0 1 160 344 503 1.44e-45 156
Msa0655060 MtrunA17_Chr1g0146681 45.963 161 85 2 1 160 368 527 7.20e-45 155
Msa0655060 MtrunA17_Chr2g0285601 39.873 158 95 0 1 158 313 470 1.57e-44 154
Msa0655060 MtrunA17_Chr4g0055661 42.500 160 92 0 1 160 334 493 2.45e-44 154
Msa0655060 MtrunA17_Chr6g0461581 43.750 160 90 0 1 160 760 919 4.96e-44 154
Msa0655060 MtrunA17_Chr1g0210961 42.500 160 92 0 1 160 491 650 5.17e-44 153
Msa0655060 MtrunA17_Chr7g0259141 45.625 160 87 0 1 160 450 609 6.33e-44 153
Msa0655060 MtrunA17_Chr2g0278191 45.570 158 86 0 1 158 382 539 6.95e-44 152
Msa0655060 MtrunA17_Chr5g0417311 41.875 160 93 0 1 160 300 459 1.22e-43 151
Msa0655060 MtrunA17_Chr4g0076041 44.937 158 87 0 1 158 382 539 1.67e-43 151
Msa0655060 MtrunA17_Chr4g0013841 40.252 159 95 0 1 159 539 697 1.72e-43 152
Msa0655060 MtrunA17_Chr1g0193831 43.478 161 90 1 1 160 512 672 2.32e-43 152
Msa0655060 MtrunA17_Chr3g0077311 40.994 161 94 1 1 160 81 241 4.97e-43 143
Msa0655060 MtrunA17_Chr8g0391681 41.875 160 93 0 1 160 653 812 6.62e-43 151
Msa0655060 MtrunA17_Chr1g0178471 43.125 160 91 0 1 160 337 496 8.47e-43 149
Msa0655060 MtrunA17_Chr4g0060651 42.405 158 91 0 1 158 349 506 9.43e-43 149
Msa0655060 MtrunA17_Chr7g0266871 42.500 160 92 0 1 160 382 541 1.88e-42 148
Msa0655060 MtrunA17_Chr8g0386861 46.203 158 84 1 1 158 626 782 1.94e-42 149
Msa0655060 MtrunA17_Chr1g0166001 41.509 159 93 0 1 159 553 711 2.50e-42 149
Msa0655060 MtrunA17_Chr7g0218091 41.250 160 94 0 1 160 391 550 2.60e-42 148
Msa0655060 MtrunA17_Chr2g0321231 37.975 158 98 0 1 158 565 722 3.59e-42 149
Msa0655060 MtrunA17_Chr4g0006361 44.099 161 89 1 1 160 453 613 3.74e-42 148
Msa0655060 MtrunA17_Chr3g0094791 41.250 160 94 0 1 160 420 579 3.89e-42 148
Msa0655060 MtrunA17_Chr3g0136451 40.252 159 95 0 1 159 673 831 6.57e-42 148
Msa0655060 MtrunA17_Chr1g0149951 42.857 161 91 1 1 160 481 641 6.96e-42 147
Msa0655060 MtrunA17_Chr3g0081081 42.767 159 91 0 1 159 493 651 7.80e-42 148
Msa0655060 MtrunA17_Chr1g0209951 41.250 160 94 0 1 160 560 719 9.20e-42 148
Msa0655060 MtrunA17_Chr7g0266961 41.875 160 93 0 1 160 382 541 2.02e-41 145
Msa0655060 MtrunA17_Chr4g0014491 42.405 158 91 0 1 158 720 877 3.51e-41 146
Msa0655060 MtrunA17_Chr3g0081091 42.500 160 91 1 1 159 510 669 3.69e-41 146
Msa0655060 MtrunA17_Chr5g0406141 39.375 160 97 0 1 160 528 687 4.17e-41 145
Msa0655060 MtrunA17_Chr7g0252001 41.250 160 94 0 1 160 372 531 5.78e-41 145
Msa0655060 MtrunA17_Chr4g0053681 41.875 160 93 0 1 160 326 485 5.84e-41 144
Msa0655060 MtrunA17_Chr7g0272891 41.875 160 93 0 1 160 433 592 6.36e-41 144
Msa0655060 MtrunA17_Chr8g0379211 40.881 159 94 0 1 159 569 727 6.75e-41 145
Msa0655060 MtrunA17_Chr4g0062971 40.373 161 94 1 1 159 723 883 7.91e-41 145
Msa0655060 MtrunA17_Chr1g0192601 39.623 159 96 0 1 159 313 471 1.20e-40 142
Msa0655060 MtrunA17_Chr4g0045161 40.881 159 94 0 1 159 683 841 1.22e-40 144
Msa0655060 MtrunA17_Chr8g0392791 39.375 160 97 0 1 160 466 625 1.24e-40 144
Msa0655060 MtrunA17_Chr2g0285911 41.935 155 90 0 1 155 384 538 1.31e-40 143
Msa0655060 MtrunA17_Chr1g0205461 38.750 160 98 0 1 160 482 641 1.36e-40 144
Msa0655060 MtrunA17_Chr4g0055071 40.252 159 95 0 1 159 390 548 1.39e-40 143
Msa0655060 MtrunA17_Chr4g0003141 39.873 158 95 0 1 158 444 601 1.44e-40 144
Msa0655060 MtrunA17_Chr3g0130341 41.509 159 93 0 1 159 463 621 1.76e-40 144
Msa0655060 MtrunA17_Chr1g0185091 43.396 159 90 0 1 159 642 800 1.79e-40 144
Msa0655060 MtrunA17_Chr4g0073691 42.138 159 92 0 1 159 483 641 2.32e-40 144
Msa0655060 MtrunA17_Chr6g0458311 40.625 160 95 0 1 160 446 605 2.39e-40 143
Msa0655060 MtrunA17_Chr7g0222961 41.875 160 92 1 1 160 420 578 2.42e-40 143
Msa0655060 MtrunA17_Chr7g0246581 37.107 159 100 0 1 159 508 666 2.54e-40 144
Msa0655060 MtrunA17_Chr7g0235501 38.750 160 98 0 1 160 355 514 3.17e-40 142
Msa0655060 MtrunA17_Chr8g0349171 42.857 161 91 1 1 160 438 598 3.65e-40 142
Msa0655060 MtrunA17_Chr8g0364661 39.623 159 96 0 1 159 390 548 3.67e-40 142
Msa0655060 MtrunA17_Chr4g0051901 40.252 159 95 0 1 159 415 573 4.67e-40 142
Msa0655060 MtrunA17_Chr5g0443321 37.888 161 99 1 1 160 335 495 4.83e-40 141
Msa0655060 MtrunA17_Chr2g0287441 40.252 159 95 0 1 159 523 681 6.65e-40 142
Msa0655060 MtrunA17_Chr5g0396341 37.500 160 100 0 1 160 591 750 7.22e-40 142
Msa0655060 MtrunA17_Chr1g0174141 41.875 160 91 2 1 158 185 344 7.28e-40 140
Msa0655060 MtrunA17_Chr8g0348641 38.750 160 98 0 1 160 443 602 8.92e-40 141
Msa0655060 MtrunA17_Chr1g0165931 39.623 159 96 0 1 159 329 487 1.13e-39 140
Msa0655060 MtrunA17_Chr2g0307871 40.000 160 96 0 1 160 675 834 1.34e-39 142
Msa0655060 MtrunA17_Chr1g0210371 38.125 160 99 0 1 160 330 489 1.39e-39 140
Msa0655060 MtrunA17_Chr3g0087821 37.888 161 99 1 1 160 322 482 1.89e-39 140
Msa0655060 MtrunA17_Chr6g0476401 40.645 155 92 0 1 155 41 195 2.00e-39 135
Msa0655060 MtrunA17_Chr4g0051471 41.139 158 93 0 1 158 332 489 2.12e-39 140
Msa0655060 MtrunA17_Chr5g0396201 38.125 160 99 0 1 160 369 528 2.71e-39 140
Msa0655060 MtrunA17_Chr5g0404391 36.875 160 101 0 1 160 315 474 2.96e-39 139
Msa0655060 MtrunA17_Chr7g0217631 38.750 160 98 0 1 160 400 559 3.11e-39 140
Msa0655060 MtrunA17_Chr7g0263761 42.138 159 92 0 1 159 543 701 3.18e-39 140
Msa0655060 MtrunA17_Chr2g0283441 42.593 162 91 2 1 160 347 508 3.29e-39 139
Msa0655060 MtrunA17_Chr8g0392771 37.736 159 99 0 1 159 434 592 8.17e-39 139
Msa0655060 MtrunA17_Chr6g0476351 40.000 155 93 0 1 155 316 470 2.23e-38 137
Msa0655060 MtrunA17_Chr5g0408161 40.000 160 96 0 1 160 711 870 2.28e-38 138
Msa0655060 MtrunA17_Chr8g0347201 38.608 158 97 0 1 158 637 794 2.32e-38 138
Msa0655060 MtrunA17_Chr8g0366221 37.500 160 100 0 1 160 377 536 2.86e-38 137
Msa0655060 MtrunA17_Chr1g0164381 40.000 160 96 0 1 160 400 559 2.87e-38 137
Msa0655060 MtrunA17_Chr2g0279761 38.994 159 97 0 1 159 447 605 3.48e-38 137
Msa0655060 MtrunA17_Chr7g0251141 41.875 160 92 1 1 160 286 444 4.08e-38 135
Msa0655060 MtrunA17_Chr7g0247091 38.125 160 99 0 1 160 381 540 4.33e-38 136
Msa0655060 MtrunA17_Chr8g0368101 36.875 160 101 0 1 160 457 616 5.81e-38 137
Msa0655060 MtrunA17_Chr7g0252091 37.888 161 99 1 1 160 557 717 5.89e-38 137
Msa0655060 MtrunA17_Chr8g0365961 36.875 160 101 0 1 160 448 607 6.12e-38 137
Msa0655060 MtrunA17_Chr4g0063341 36.646 161 101 1 1 160 437 597 6.42e-38 137
Msa0655060 MtrunA17_Chr8g0390071 37.500 160 100 0 1 160 272 431 6.70e-38 134
Msa0655060 MtrunA17_Chr2g0296821 40.964 166 92 2 1 160 585 750 7.91e-38 136
Msa0655060 MtrunA17_Chr4g0047321 41.875 160 91 2 1 158 289 448 8.42e-38 135
Msa0655060 MtrunA17_Chr8g0393341 38.065 155 96 0 1 155 485 639 9.96e-38 136
Msa0655060 MtrunA17_Chr3g0081591 38.994 159 97 0 1 159 397 555 1.05e-37 136
Msa0655060 MtrunA17_Chr4g0031971 41.250 160 93 1 1 159 375 534 1.14e-37 135
Msa0655060 MtrunA17_Chr4g0051151 36.875 160 101 0 1 160 477 636 1.21e-37 135
Msa0655060 MtrunA17_Chr1g0165911 39.623 159 83 1 1 159 351 496 1.42e-37 135
Msa0655060 MtrunA17_Chr7g0234661 37.736 159 99 0 1 159 710 868 1.54e-37 135
Msa0655060 MtrunA17_Chr4g0060771 36.250 160 102 0 1 160 333 492 1.60e-37 135
Msa0655060 MtrunA17_Chr3g0099291 37.975 158 98 0 1 158 485 642 1.77e-37 135
Msa0655060 MtrunA17_Chr5g0402921 43.750 160 88 2 1 159 490 648 2.47e-37 135
Msa0655060 MtrunA17_Chr8g0381811 38.750 160 98 0 1 160 372 531 2.47e-37 134
Msa0655060 MtrunA17_Chr4g0052501 39.506 162 96 1 1 160 551 712 2.57e-37 135
Msa0655060 MtrunA17_Chr3g0131281 38.750 160 98 0 1 160 663 822 2.85e-37 135
Msa0655060 MtrunA17_Chr5g0394591 37.342 158 99 0 1 158 430 587 2.88e-37 135
Msa0655060 MtrunA17_Chr2g0331571 38.125 160 98 1 1 160 321 479 2.94e-37 134
Msa0655060 MtrunA17_Chr1g0165451 39.752 161 96 1 1 160 259 419 2.94e-37 132
Msa0655060 MtrunA17_Chr8g0351541 39.623 159 96 0 1 159 560 718 3.36e-37 135
Msa0655060 MtrunA17_Chr1g0146671 40.000 160 95 1 1 160 614 772 3.85e-37 134
Msa0655060 MtrunA17_Chr4g0044381 38.365 159 98 0 1 159 514 672 4.00e-37 134
Msa0655060 MtrunA17_Chr5g0396241 40.625 160 95 0 1 160 503 662 4.19e-37 134
Msa0655060 MtrunA17_Chr5g0410091 35.625 160 103 0 1 160 146 305 4.62e-37 132
Msa0655060 MtrunA17_Chr2g0295771 40.252 159 92 1 1 159 206 361 5.81e-37 132
Msa0655060 MtrunA17_Chr7g0270241 38.750 160 97 1 1 160 390 548 5.96e-37 133
Msa0655060 MtrunA17_Chr4g0003921 38.994 159 97 0 1 159 573 731 6.70e-37 134
Msa0655060 MtrunA17_Chr3g0079111 40.361 166 92 1 1 159 292 457 7.45e-37 132
Msa0655060 MtrunA17_Chr3g0130351 35.802 162 102 1 1 160 353 514 9.40e-37 132
Msa0655060 MtrunA17_Chr2g0284331 40.000 160 96 0 1 160 359 518 1.09e-36 132
Msa0655060 MtrunA17_Chr6g0480651 35.849 159 102 0 1 159 446 604 1.29e-36 133
Msa0655060 MtrunA17_Chr4g0045481 39.375 160 97 0 1 160 505 664 1.66e-36 132
Msa0655060 MtrunA17_Chr3g0141251 38.125 160 99 0 1 160 337 496 2.18e-36 131
Msa0655060 MtrunA17_Chr1g0186131 37.500 160 100 0 1 160 495 654 2.34e-36 132
Msa0655060 MtrunA17_Chr6g0476781 35.404 161 102 1 1 159 315 475 2.35e-36 131
Msa0655060 MtrunA17_Chr5g0446451 40.252 159 95 0 1 159 509 667 2.50e-36 132
Msa0655060 MtrunA17_Chr7g0217701 35.625 160 103 0 1 160 344 503 2.87e-36 130
Msa0655060 MtrunA17_Chr4g0005171 38.125 160 99 0 1 160 526 685 2.99e-36 132
Msa0655060 MtrunA17_Chr8g0378921 36.250 160 102 0 1 160 315 474 3.53e-36 131
Msa0655060 MtrunA17_Chr8g0380101 38.125 160 99 0 1 160 315 474 4.74e-36 130
Msa0655060 MtrunA17_Chr2g0300971 37.107 159 100 0 1 159 440 598 5.07e-36 131
Msa0655060 MtrunA17_Chr7g0228601 38.750 160 98 0 1 160 652 811 5.20e-36 131
Msa0655060 MtrunA17_Chr1g0164941 38.710 155 95 0 1 155 404 558 5.67e-36 130
Msa0655060 MtrunA17_Chr8g0380361 40.132 152 91 0 8 159 407 558 5.76e-36 131
Msa0655060 MtrunA17_Chr3g0087311 35.625 160 103 0 1 160 675 834 9.57e-36 130
Msa0655060 MtrunA17_Chr5g0403151 34.810 158 103 0 1 158 439 596 1.35e-35 130
Msa0655060 MtrunA17_Chr1g0166301 35.000 160 104 0 1 160 513 672 1.36e-35 130
Msa0655060 MtrunA17_Chr2g0326691 32.500 160 108 0 1 160 378 537 1.50e-35 130
Msa0655060 MtrunA17_Chr2g0303911 39.130 161 97 1 1 160 493 653 1.53e-35 130
Msa0655060 MtrunA17_Chr3g0144951 39.752 161 95 1 1 159 269 429 1.89e-35 129
Msa0655060 MtrunA17_Chr8g0371731 35.000 160 104 0 1 160 501 660 2.11e-35 129
Msa0655060 MtrunA17_Chr7g0249241 39.241 158 96 0 1 158 455 612 3.71e-35 129
Msa0655060 MtrunA17_Chr5g0396021 35.625 160 100 1 1 160 471 627 6.95e-35 128
Msa0655060 MtrunA17_Chr8g0364841 37.500 160 100 0 1 160 480 639 8.48e-35 128
Msa0655060 MtrunA17_Chr4g0034341 39.623 159 95 1 1 159 468 625 8.50e-35 127
Msa0655060 MtrunA17_Chr3g0119391 39.735 151 91 0 8 158 320 470 1.41e-34 125
Msa0655060 MtrunA17_Chr2g0303841 38.125 160 98 1 1 160 427 585 1.42e-34 127
Msa0655060 MtrunA17_Chr3g0081041 37.500 160 100 0 1 160 364 523 1.61e-34 127
Msa0655060 MtrunA17_Chr4g0004081 32.500 160 108 0 1 160 475 634 1.97e-34 127
Msa0655060 MtrunA17_Chr7g0245241 35.443 158 102 0 1 158 407 564 2.11e-34 127
Msa0655060 MtrunA17_Chr5g0394691 38.816 152 93 0 9 160 546 697 2.22e-34 127
Msa0655060 MtrunA17_Chr7g0251271 36.478 159 101 0 1 159 388 546 2.55e-34 125
Msa0655060 MtrunA17_Chr1g0202451 38.125 160 99 0 1 160 593 752 2.85e-34 126
Msa0655060 MtrunA17_Chr3g0093831 40.000 160 94 2 1 159 611 769 3.29e-34 126
Msa0655060 MtrunA17_Chr5g0406941 36.076 158 98 1 1 158 585 739 3.31e-34 126
Msa0655060 MtrunA17_Chr8g0367121 37.500 160 100 0 1 160 431 590 4.35e-34 125
Msa0655060 MtrunA17_Chr4g0060311 40.123 162 92 2 1 158 361 521 4.47e-34 125
Msa0655060 MtrunA17_Chr4g0037631 37.736 159 99 0 1 159 381 539 4.48e-34 125
Msa0655060 MtrunA17_Chr4g0037911 40.123 162 92 2 1 158 359 519 5.40e-34 125
Msa0655060 MtrunA17_Chr4g0061031 39.759 166 92 3 1 158 318 483 7.69e-34 124
Msa0655060 MtrunA17_Chr2g0298181 38.272 162 98 1 1 160 392 553 8.07e-34 124
Msa0655060 MtrunA17_Chr3g0078291 37.267 161 100 1 1 160 278 438 8.39e-34 124
Msa0655060 MtrunA17_Chr4g0020001 37.500 160 99 1 1 160 273 431 8.77e-34 124
Msa0655060 MtrunA17_Chr7g0227121 42.308 156 89 1 1 155 312 467 1.00e-33 123
Msa0655060 MtrunA17_Chr5g0412041 40.000 160 95 1 1 160 315 473 1.17e-33 124
Msa0655060 MtrunA17_Chr5g0416111 38.750 160 96 2 1 160 448 605 1.18e-33 124
Msa0655060 MtrunA17_Chr6g0477951 39.490 157 94 1 1 156 437 593 1.28e-33 124
Msa0655060 MtrunA17_Chr2g0329731 34.375 160 104 1 1 159 44 203 1.31e-33 117
Msa0655060 MtrunA17_Chr4g0074261 37.736 159 99 0 1 159 493 651 1.60e-33 124
Msa0655060 MtrunA17_Chr5g0418811 36.747 166 99 2 1 160 284 449 1.69e-33 123
Msa0655060 MtrunA17_Chr1g0165051 34.591 159 104 0 1 159 583 741 1.71e-33 124
Msa0655060 MtrunA17_Chr5g0419031 36.810 163 100 3 1 160 261 423 1.75e-33 123
Msa0655060 MtrunA17_Chr5g0421551 38.750 160 97 1 1 160 376 534 1.75e-33 124
Msa0655060 MtrunA17_Chr8g0385541 34.177 158 104 0 1 158 317 474 1.78e-33 123
Msa0655060 MtrunA17_Chr1g0192971 35.849 159 102 0 1 159 349 507 1.94e-33 123
Msa0655060 MtrunA17_Chr4g0067001 37.888 161 98 1 1 159 298 458 2.09e-33 123
Msa0655060 MtrunA17_Chr1g0186051 35.404 161 102 2 1 160 412 571 2.26e-33 123
Msa0655060 MtrunA17_Chr5g0407181 34.375 160 104 1 1 159 389 548 2.43e-33 123
Msa0655060 MtrunA17_Chr7g0226461 35.000 160 104 0 1 160 337 496 2.45e-33 123
Msa0655060 MtrunA17_Chr3g0091701 37.107 159 99 1 1 159 83 240 2.97e-33 117
Msa0655060 MtrunA17_Chr3g0131331 35.220 159 103 0 1 159 254 412 3.65e-33 122
Msa0655060 MtrunA17_Chr8g0371191 36.250 160 101 1 1 160 295 453 3.86e-33 122
Msa0655060 MtrunA17_Chr6g0476471 40.000 135 81 0 21 155 1 135 4.28e-33 118
Msa0655060 MtrunA17_Chr3g0091731 38.365 159 97 1 1 159 250 407 4.52e-33 120
Msa0655060 MtrunA17_Chr3g0114971 37.500 152 95 0 8 159 522 673 5.30e-33 122
Msa0655060 MtrunA17_Chr5g0412001 39.375 160 96 1 1 160 376 534 6.74e-33 122
Msa0655060 MtrunA17_Chr1g0205351 35.185 162 103 1 1 160 382 543 9.18e-33 122
Msa0655060 MtrunA17_Chr2g0282141 35.220 159 102 1 1 159 332 489 1.23e-32 120
Msa0655060 MtrunA17_Chr8g0366421 36.875 160 101 0 1 160 660 819 1.31e-32 122
Msa0655060 MtrunA17_Chr8g0391951 36.875 160 100 1 1 159 400 559 1.40e-32 121
Msa0655060 MtrunA17_Chr7g0246841 36.875 160 101 0 1 160 473 632 2.60e-32 120
Msa0655060 MtrunA17_Chr2g0308771 37.500 160 100 0 1 160 262 421 2.95e-32 119
Msa0655060 MtrunA17_Chr3g0117111 39.241 158 96 0 1 158 378 535 3.07e-32 120
Msa0655060 MtrunA17_Chr4g0042871 38.365 159 98 0 1 159 515 673 3.58e-32 120
Msa0655060 MtrunA17_Chr1g0149231 32.278 158 107 0 1 158 312 469 3.73e-32 120
Msa0655060 MtrunA17_Chr3g0133921 33.125 160 107 0 1 160 526 685 4.26e-32 120
Msa0655060 MtrunA17_Chr1g0173941 38.125 160 98 1 1 159 567 726 6.53e-32 119
Msa0655060 MtrunA17_Chr5g0418441 37.107 159 100 0 1 159 578 736 8.87e-32 119
Msa0655060 MtrunA17_Chr2g0319231 35.000 160 104 0 1 160 29 188 9.94e-32 113
Msa0655060 MtrunA17_Chr2g0288971 34.591 159 104 0 1 159 542 700 1.41e-31 119
Msa0655060 MtrunA17_Chr7g0214431 33.962 159 104 1 1 159 390 547 2.00e-31 118
Msa0655060 MtrunA17_Chr8g0374211 34.375 160 104 1 1 159 321 480 2.72e-31 117
Msa0655060 MtrunA17_Chr7g0248271 33.962 159 100 2 1 159 405 558 2.75e-31 117
Msa0655060 MtrunA17_Chr7g0257861 34.783 161 103 2 1 160 296 455 2.84e-31 117
Msa0655060 MtrunA17_Chr5g0440921 34.568 162 104 1 1 160 382 543 3.08e-31 117
Msa0655060 MtrunA17_Chr1g0181931 32.704 159 107 0 1 159 465 623 5.37e-31 117
Msa0655060 MtrunA17_Chr7g0269041 38.000 150 92 1 12 160 306 455 7.24e-31 115
Msa0655060 MtrunA17_Chr1g0211821 33.333 159 105 1 1 159 320 477 1.90e-30 115
Msa0655060 MtrunA17_Chr7g0248291 33.962 159 100 2 1 159 476 629 2.15e-30 115
Msa0655060 MtrunA17_Chr8g0376511 38.125 160 95 2 1 159 284 440 2.26e-30 114
Msa0655060 MtrunA17_Chr8g0375731 36.129 155 99 0 1 155 324 478 2.37e-30 115
Msa0655060 MtrunA17_Chr4g0040441 33.974 156 102 1 1 156 297 451 2.44e-30 114
Msa0655060 MtrunA17_Chr6g0488851 38.650 163 97 1 1 160 409 571 5.03e-30 114
Msa0655060 MtrunA17_Chr2g0313271 33.103 145 97 0 1 145 492 636 5.70e-30 114
Msa0655060 MtrunA17_Chr2g0313451 34.483 145 95 0 1 145 416 560 2.26e-29 112
Msa0655060 MtrunA17_Chr5g0418691 36.585 164 99 2 1 159 312 475 2.54e-29 112
Msa0655060 MtrunA17_Chr5g0448481 34.969 163 103 2 1 160 600 762 2.65e-29 112
Msa0655060 MtrunA17_Chr5g0428021 33.125 160 107 0 1 160 468 627 5.40e-29 111
Msa0655060 MtrunA17_Chr2g0291271 35.758 165 101 2 1 160 327 491 5.54e-29 110
Msa0655060 MtrunA17_Chr6g0457741 33.939 165 99 3 1 160 350 509 6.28e-29 110
Msa0655060 MtrunA17_Chr3g0125871 33.333 165 100 3 1 160 350 509 7.82e-29 110
Msa0655060 MtrunA17_Chr8g0381801 33.333 159 104 2 1 159 402 558 1.10e-28 110
Msa0655060 MtrunA17_Chr4g0010851 52.577 97 45 1 21 116 1 97 5.64e-28 101
Msa0655060 MtrunA17_Chr4g0066641 35.185 162 103 2 1 160 408 569 6.22e-28 108
Msa0655060 MtrunA17_Chr8g0337021 42.623 122 70 0 1 122 181 302 6.59e-28 105
Msa0655060 MtrunA17_Chr6g0453621 31.447 159 108 1 1 159 329 486 7.98e-28 108
Msa0655060 MtrunA17_Chr4g0001441 36.250 160 101 1 2 160 381 540 8.15e-28 107
Msa0655060 MtrunA17_Chr3g0106791 41.748 103 60 0 56 158 1 103 1.24e-27 101
Msa0655060 MtrunA17_Chr2g0321851 41.803 122 71 0 1 122 181 302 2.00e-27 104
Msa0655060 MtrunA17_Chr4g0010831 36.970 165 82 3 13 155 229 393 3.76e-27 105
Msa0655060 MtrunA17_Chr4g0044101 40.952 105 62 0 56 160 1 105 2.26e-26 96.3
Msa0655060 MtrunA17_Chr7g0271111 37.333 150 91 3 9 156 248 396 4.06e-26 102
Msa0655060 MtrunA17_Chr7g0265441 28.395 162 114 1 1 160 573 734 4.62e-26 103
Msa0655060 MtrunA17_Chr3g0109081 34.416 154 100 1 8 160 388 541 5.37e-26 102
Msa0655060 MtrunA17_Chr2g0321901 39.837 123 74 0 1 123 181 303 5.41e-26 100
Msa0655060 MtrunA17_Chr4g0037471 33.750 160 106 0 1 160 383 542 1.05e-25 102
Msa0655060 MtrunA17_Chr5g0430251 35.971 139 89 0 1 139 598 736 1.13e-25 102
Msa0655060 MtrunA17_Chr7g0220281 31.250 160 103 2 1 160 323 475 1.26e-25 101
Msa0655060 MtrunA17_Chr8g0365911 32.258 155 105 0 1 155 482 636 1.86e-25 101
Msa0655060 MtrunA17_Chr2g0307101 34.337 166 100 2 1 160 320 482 5.37e-25 99.8
Msa0655060 MtrunA17_Chr4g0066861 30.189 159 110 1 1 159 425 582 1.25e-24 99.0
Msa0655060 MtrunA17_Chr3g0125601 28.125 160 115 0 1 160 389 548 1.55e-24 98.6
Msa0655060 MtrunA17_Chr3g0145381 30.000 160 107 1 1 155 290 449 4.02e-24 97.1
Msa0655060 MtrunA17_Chr5g0399291 30.435 161 110 2 1 159 342 502 7.84e-24 96.7
Msa0655060 MtrunA17_Chr2g0321911 31.875 160 93 1 1 160 295 438 9.42e-24 96.3
Msa0655060 MtrunA17_Chr5g0405901 28.108 185 108 3 1 160 341 525 1.30e-22 93.2
Msa0655060 MtrunA17_Chr7g0268011 43.564 101 57 0 1 101 184 284 2.89e-22 90.1
Msa0655060 MtrunA17_Chr3g0125591 39.796 98 59 0 1 98 82 179 9.85e-21 84.0
Msa0655060 MtrunA17_Chr4g0044021 45.570 79 43 0 2 80 1 79 1.24e-20 80.5
Msa0655060 MtrunA17_Chr5g0418021 32.558 129 87 0 1 129 311 439 9.38e-20 85.1
Msa0655060 MtrunA17_Chr1g0166031 32.558 129 87 0 1 129 66 194 1.28e-19 84.0
Msa0655060 MtrunA17_Chr2g0287621 30.233 129 90 0 1 129 171 299 3.30e-18 80.5
Msa0655060 MtrunA17_Chr4g0044971 30.233 129 90 0 1 129 265 393 2.35e-16 75.1
Msa0655060 MtrunA17_Chr6g0455591 30.275 109 76 0 1 109 610 718 6.30e-16 73.9
Msa0655060 MtrunA17_Chr8g0374851 35.802 81 52 0 50 130 3 83 4.07e-15 66.6
Msa0655060 MtrunA17_Chr5g0447551 38.158 76 47 0 1 76 708 783 4.58e-15 71.6
Msa0655060 MtrunA17_Chr3g0078691 38.356 73 45 0 56 128 1 73 8.10e-15 66.2
Msa0655060 MtrunA17_Chr6g0488111 30.597 134 92 1 1 134 171 303 9.80e-14 67.8
Msa0655060 MtrunA17_Chr7g0252681 33.673 98 65 0 1 98 323 420 1.05e-13 67.4
Msa0655060 MtrunA17_Chr6g0488311 30.597 134 91 2 1 134 171 302 2.33e-13 66.6
Msa0655060 MtrunA17_Chr3g0125571 29.730 111 78 0 14 124 597 707 2.75e-13 66.6
Msa0655060 MtrunA17_Chr7g0260141 41.463 82 47 1 8 88 38 119 5.89e-13 62.4
Msa0655060 MtrunA17_Chr6g0463061 32.727 110 73 1 1 110 163 271 3.94e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0655060 AT2G41080.1 69.565 161 48 1 1 160 349 509 1.13e-77 243
Msa0655060 AT3G02330.1 48.125 160 82 1 1 159 675 834 2.47e-47 164
Msa0655060 AT4G14050.2 44.099 161 89 1 1 160 257 417 1.09e-44 154
Msa0655060 AT4G14050.1 44.099 161 89 1 1 160 310 470 2.77e-44 154
Msa0655060 AT4G18750.1 43.590 156 88 0 1 156 571 726 1.28e-43 153
Msa0655060 AT4G16835.1 43.750 160 90 0 1 160 356 515 2.55e-43 152
Msa0655060 AT4G02750.1 41.250 160 94 0 1 160 481 640 6.54e-43 151
Msa0655060 AT5G13230.1 42.500 160 92 0 1 160 521 680 9.22e-43 151
Msa0655060 AT3G49170.1 40.000 160 96 0 1 160 546 705 1.00e-42 151
Msa0655060 AT3G20730.1 43.210 162 90 1 1 160 390 551 1.70e-42 148
Msa0655060 AT3G03580.1 41.250 160 94 0 1 160 581 740 1.90e-42 150
Msa0655060 AT3G29230.1 40.252 159 95 0 1 159 387 545 1.99e-42 149
Msa0655060 AT4G21300.1 42.236 161 92 1 1 160 614 774 2.02e-42 150
Msa0655060 AT1G16480.2 43.038 158 90 0 1 158 620 777 2.10e-42 150
Msa0655060 AT1G16480.1 43.038 158 90 0 1 158 637 794 2.72e-42 150
Msa0655060 AT4G14820.1 41.250 160 94 0 1 160 416 575 2.93e-42 149
Msa0655060 AT4G13650.1 42.500 160 92 0 1 160 764 923 3.11e-42 149
Msa0655060 AT2G20540.2 38.125 160 99 0 1 160 283 442 3.44e-42 147
Msa0655060 AT4G39952.1 43.125 160 90 1 1 160 605 763 4.14e-42 149
Msa0655060 AT1G18485.1 41.615 161 93 1 1 160 669 829 5.16e-42 149
Msa0655060 AT2G20540.1 38.125 160 99 0 1 160 313 472 6.02e-42 146
Msa0655060 AT5G48910.1 44.375 160 89 0 1 160 346 505 6.48e-42 147
Msa0655060 AT5G66520.1 43.750 160 90 0 1 160 319 478 9.21e-42 147
Msa0655060 AT5G39350.1 40.000 160 96 0 1 160 496 655 1.23e-41 147
Msa0655060 AT1G74630.1 40.506 158 94 0 1 158 342 499 2.24e-41 146
Msa0655060 AT1G74630.2 40.506 158 94 0 1 158 357 514 2.42e-41 146
Msa0655060 AT2G02980.1 40.625 160 95 0 1 160 302 461 2.49e-41 145
Msa0655060 AT4G30700.1 38.365 159 98 0 1 159 492 650 3.78e-41 146
Msa0655060 AT3G15130.1 40.000 155 93 0 1 155 385 539 4.88e-41 145
Msa0655060 AT1G28690.1 41.875 160 92 1 1 159 345 504 7.06e-41 143
Msa0655060 AT4G33990.1 41.935 155 90 0 1 155 523 677 8.46e-41 145
Msa0655060 AT4G33990.1 30.952 126 84 3 1 125 421 544 9.31e-11 59.7
Msa0655060 AT4G33990.2 41.935 155 90 0 1 155 516 670 9.05e-41 145
Msa0655060 AT5G59200.1 41.250 160 94 0 1 160 327 486 9.22e-41 143
Msa0655060 AT3G26782.1 42.500 160 92 0 1 160 359 518 1.05e-40 144
Msa0655060 AT3G05340.1 41.509 159 93 0 1 159 429 587 1.06e-40 144
Msa0655060 AT3G23330.2 40.252 159 95 0 1 159 306 464 2.35e-40 143
Msa0655060 AT3G24000.1 41.875 160 92 1 1 160 334 492 2.41e-40 143
Msa0655060 AT2G22410.1 38.750 160 98 0 1 160 461 620 2.82e-40 143
Msa0655060 AT5G42450.2 41.104 163 93 2 1 160 217 379 2.84e-40 140
Msa0655060 AT3G23330.1 40.252 159 95 0 1 159 415 573 3.05e-40 143
Msa0655060 AT3G49710.1 39.623 159 96 0 1 159 418 576 3.24e-40 143
Msa0655060 AT3G63370.2 40.252 159 95 0 1 159 659 817 4.41e-40 143
Msa0655060 AT3G63370.1 40.252 159 95 0 1 159 659 817 4.99e-40 143
Msa0655060 AT3G12770.1 40.625 160 94 1 1 160 395 553 6.01e-40 142
Msa0655060 AT4G19191.1 43.396 159 90 0 1 159 430 588 6.33e-40 142
Msa0655060 AT1G06140.1 44.304 158 88 0 1 158 384 541 6.33e-40 141
Msa0655060 AT1G20230.1 36.478 159 101 0 1 159 460 618 7.09e-40 142
Msa0655060 AT2G22070.1 37.500 160 100 0 1 160 486 645 9.37e-40 142
Msa0655060 AT5G42450.1 41.104 163 93 2 1 160 301 463 9.85e-40 140
Msa0655060 AT1G26900.1 46.259 147 77 1 1 145 400 546 1.13e-39 141
Msa0655060 AT2G21090.1 38.994 159 97 0 1 159 384 542 1.25e-39 141
Msa0655060 AT1G68930.2 39.375 160 97 0 1 160 417 576 1.62e-39 141
Msa0655060 AT4G21065.2 38.365 159 97 1 1 158 161 319 1.69e-39 139
Msa0655060 AT1G08070.2 42.500 160 92 0 1 160 337 496 1.79e-39 141
Msa0655060 AT3G11460.1 41.875 160 93 0 1 160 329 488 1.83e-39 140
Msa0655060 AT1G68930.1 39.375 160 97 0 1 160 443 602 1.96e-39 141
Msa0655060 AT1G08070.1 42.500 160 92 0 1 160 441 600 1.99e-39 141
Msa0655060 AT2G13600.1 37.736 159 99 0 1 159 464 622 2.35e-39 141
Msa0655060 AT5G04780.1 36.875 160 101 0 1 160 335 494 2.73e-39 140
Msa0655060 AT5G40410.1 38.365 159 98 0 1 159 307 465 2.79e-39 140
Msa0655060 AT4G32430.2 40.881 159 94 0 1 159 414 572 3.35e-39 140
Msa0655060 AT3G53360.1 42.138 159 92 0 1 159 545 703 3.75e-39 140
Msa0655060 AT3G53360.2 42.138 159 92 0 1 159 545 703 3.75e-39 140
Msa0655060 AT4G21065.1 38.365 159 97 1 1 158 294 452 4.59e-39 139
Msa0655060 AT4G32430.1 40.881 159 94 0 1 159 546 704 5.03e-39 140
Msa0655060 AT2G27610.1 38.750 160 98 0 1 160 567 726 6.56e-39 140
Msa0655060 AT5G56310.1 38.365 159 98 0 1 159 322 480 7.17e-39 138
Msa0655060 AT5G50990.1 37.975 158 95 1 1 158 237 391 7.56e-39 138
Msa0655060 AT4G20770.1 38.365 159 98 0 1 159 591 749 1.39e-38 139
Msa0655060 AT3G09040.2 38.750 160 98 0 1 160 830 989 1.66e-38 139
Msa0655060 AT3G09040.3 38.750 160 98 0 1 160 830 989 1.66e-38 139
Msa0655060 AT3G09040.1 38.750 160 98 0 1 160 805 964 1.73e-38 139
Msa0655060 AT3G09040.4 38.750 160 98 0 1 160 805 964 1.73e-38 139
Msa0655060 AT2G01510.1 42.236 161 91 1 1 159 282 442 2.00e-38 137
Msa0655060 AT2G01510.2 42.236 161 91 1 1 159 282 442 2.00e-38 137
Msa0655060 AT5G08510.1 39.623 159 96 0 1 159 288 446 3.34e-38 136
Msa0655060 AT3G57430.1 41.615 161 93 1 1 160 589 749 4.30e-38 137
Msa0655060 AT1G03510.1 40.000 160 96 0 1 160 254 413 5.69e-38 134
Msa0655060 AT3G01580.1 42.500 160 91 1 1 159 438 597 5.75e-38 137
Msa0655060 AT1G11290.1 42.405 158 91 0 1 158 510 667 6.05e-38 137
Msa0655060 AT3G46790.1 38.365 159 98 0 1 159 357 515 8.88e-38 136
Msa0655060 AT4G37380.1 37.267 161 100 1 1 160 331 491 1.08e-37 136
Msa0655060 AT3G02010.1 37.888 161 99 1 1 160 524 684 1.33e-37 136
Msa0655060 AT3G14330.1 37.736 159 99 0 1 159 409 567 1.78e-37 135
Msa0655060 AT1G13410.1 37.500 160 100 0 1 160 261 420 1.87e-37 134
Msa0655060 AT5G44230.2 39.752 161 96 1 1 160 258 418 2.03e-37 134
Msa0655060 AT2G03880.1 36.875 160 101 0 1 160 330 489 2.40e-37 135
Msa0655060 AT2G40720.1 40.000 160 96 0 1 160 649 808 2.44e-37 135
Msa0655060 AT5G44230.1 39.752 161 96 1 1 160 355 515 2.57e-37 135
Msa0655060 AT5G09950.2 37.423 163 99 2 1 160 685 847 2.82e-37 135
Msa0655060 AT5G09950.3 37.423 163 99 2 1 160 691 853 3.20e-37 135
Msa0655060 AT5G09950.1 37.423 163 99 2 1 160 691 853 3.20e-37 135
Msa0655060 AT1G09190.1 40.000 160 95 1 1 159 307 466 3.27e-37 133
Msa0655060 AT4G08210.1 39.623 159 96 0 1 159 515 673 4.35e-37 134
Msa0655060 AT2G29760.1 38.365 159 98 0 1 159 437 595 4.55e-37 134
Msa0655060 AT1G74600.1 38.365 159 98 0 1 159 724 882 4.77e-37 135
Msa0655060 AT5G06540.1 40.625 160 95 0 1 160 321 480 5.93e-37 134
Msa0655060 AT3G22690.2 42.953 149 85 0 12 160 553 701 6.38e-37 134
Msa0655060 AT1G50270.1 36.250 160 102 0 1 160 378 537 8.22e-37 133
Msa0655060 AT1G31920.1 38.065 155 96 0 1 155 306 460 8.93e-37 133
Msa0655060 AT3G22690.1 42.953 149 85 0 12 160 553 701 9.03e-37 134
Msa0655060 AT5G43790.1 37.500 160 100 0 1 160 288 447 1.86e-36 130
Msa0655060 AT5G39680.1 35.625 160 103 0 1 160 410 569 2.00e-36 133
Msa0655060 AT5G16860.1 36.478 159 101 0 1 159 550 708 2.17e-36 133
Msa0655060 AT2G37320.1 41.615 161 92 2 1 160 293 452 2.30e-36 131
Msa0655060 AT3G15930.1 35.625 160 103 0 1 160 440 599 2.43e-36 132
Msa0655060 AT5G15300.1 36.250 160 101 1 1 160 352 510 2.99e-36 131
Msa0655060 AT1G59720.1 40.000 170 92 3 1 160 326 495 3.39e-36 132
Msa0655060 AT1G71490.1 38.125 160 99 0 1 160 454 613 5.51e-36 131
Msa0655060 AT3G49142.1 36.478 159 101 0 1 159 381 539 5.93e-36 131
Msa0655060 AT1G09410.1 38.125 160 98 1 1 159 403 562 6.05e-36 131
Msa0655060 AT5G59600.1 41.060 151 89 0 1 151 360 510 7.12e-36 130
Msa0655060 AT2G45350.1 39.375 160 97 0 1 160 422 581 9.64e-36 130
Msa0655060 AT5G27110.1 40.373 161 95 1 1 160 482 642 1.01e-35 130
Msa0655060 AT4G37170.1 35.625 160 103 0 1 160 391 550 1.07e-35 130
Msa0655060 AT5G37570.1 37.500 160 100 0 1 160 377 536 1.48e-35 129
Msa0655060 AT5G37570.2 37.500 160 100 0 1 160 377 536 1.48e-35 129
Msa0655060 AT1G56690.1 35.849 159 102 0 1 159 403 561 1.66e-35 130
Msa0655060 AT1G25360.1 36.875 160 101 0 1 160 489 648 2.86e-35 129
Msa0655060 AT4G39530.1 37.736 159 98 1 1 159 627 784 2.96e-35 129
Msa0655060 AT5G13270.1 35.625 160 103 0 1 160 459 618 4.00e-35 129
Msa0655060 AT3G47840.1 41.509 159 93 0 1 159 483 641 4.39e-35 129
Msa0655060 AT1G15510.1 37.500 160 99 1 1 160 569 727 5.61e-35 129
Msa0655060 AT2G42920.2 40.000 160 96 0 1 160 330 489 5.93e-35 128
Msa0655060 AT2G42920.1 40.000 160 96 0 1 160 330 489 5.93e-35 128
Msa0655060 AT2G36730.1 40.244 164 94 2 1 160 284 447 7.41e-35 127
Msa0655060 AT1G09220.1 37.736 159 98 1 1 158 331 489 9.16e-35 127
Msa0655060 AT1G17630.2 35.484 155 100 0 1 155 506 660 1.08e-34 128
Msa0655060 AT1G17630.1 35.484 155 100 0 1 155 506 660 1.08e-34 128
Msa0655060 AT3G05240.1 38.750 160 97 1 1 159 389 548 1.36e-34 127
Msa0655060 AT5G46460.1 40.523 153 90 1 8 159 405 557 1.45e-34 127
Msa0655060 AT4G14170.2 37.500 160 99 1 1 160 208 366 1.56e-34 124
Msa0655060 AT3G04750.1 37.267 161 100 1 1 160 440 600 1.86e-34 127
Msa0655060 AT1G33350.2 34.568 162 103 1 1 159 332 493 1.94e-34 126
Msa0655060 AT1G33350.1 34.568 162 103 1 1 159 332 493 1.94e-34 126
Msa0655060 AT5G19020.1 38.994 159 97 0 1 159 513 671 2.65e-34 127
Msa0655060 AT5G65570.1 41.250 160 92 2 1 160 440 597 2.65e-34 127
Msa0655060 AT3G25970.1 36.250 160 102 0 1 160 481 640 3.30e-34 126
Msa0655060 AT4G14850.1 35.404 161 102 1 1 159 382 542 5.42e-34 125
Msa0655060 AT4G14170.1 37.500 160 99 1 1 160 307 465 5.74e-34 124
Msa0655060 AT3G47530.1 36.646 161 101 1 1 160 289 449 5.80e-34 125
Msa0655060 AT4G16470.1 38.125 160 99 0 1 160 281 440 6.51e-34 124
Msa0655060 AT5G40405.2 38.158 152 94 0 8 159 319 470 6.87e-34 125
Msa0655060 AT5G40405.1 38.158 152 94 0 8 159 319 470 6.87e-34 125
Msa0655060 AT4G01030.1 34.375 160 105 0 1 160 468 627 7.81e-34 125
Msa0655060 AT2G33760.1 36.420 162 99 2 1 158 280 441 9.73e-34 124
Msa0655060 AT1G56570.1 35.625 160 102 1 1 159 386 545 1.53e-33 124
Msa0655060 AT1G56570.2 35.625 160 102 1 1 159 386 545 1.53e-33 124
Msa0655060 AT4G33170.1 34.591 159 104 0 1 159 690 848 1.78e-33 124
Msa0655060 AT3G50420.1 37.500 160 98 2 1 159 575 733 2.30e-33 124
Msa0655060 AT2G02750.1 37.342 158 98 1 1 158 442 598 2.34e-33 124
Msa0655060 AT2G35030.1 38.125 160 99 0 1 160 405 564 2.56e-33 124
Msa0655060 AT1G69350.1 36.478 159 100 1 1 159 576 733 3.07e-33 124
Msa0655060 AT1G74400.1 36.646 161 96 1 1 155 241 401 3.68e-33 122
Msa0655060 AT3G62890.1 34.375 160 104 1 1 159 272 431 3.70e-33 123
Msa0655060 AT2G44880.1 38.365 159 96 2 1 159 346 502 4.63e-33 122
Msa0655060 AT2G44880.5 38.365 159 96 2 1 159 386 542 5.56e-33 122
Msa0655060 AT2G44880.6 38.365 159 96 2 1 159 385 541 5.70e-33 122
Msa0655060 AT2G44880.4 38.365 159 96 2 1 159 387 543 6.61e-33 122
Msa0655060 AT2G44880.3 38.365 159 96 2 1 159 387 543 6.61e-33 122
Msa0655060 AT2G44880.2 38.365 159 96 2 1 159 389 545 6.67e-33 122
Msa0655060 AT4G19220.1 36.025 161 102 1 1 160 770 930 9.07e-33 122
Msa0655060 AT3G22150.2 37.423 163 99 3 1 160 593 755 1.18e-32 122
Msa0655060 AT3G22150.1 37.423 163 99 3 1 160 593 755 1.18e-32 122
Msa0655060 AT3G49740.1 35.802 162 101 2 1 159 561 722 1.72e-32 122
Msa0655060 AT3G13880.1 35.625 160 103 0 1 160 531 690 1.97e-32 121
Msa0655060 AT4G18840.1 35.220 159 103 0 1 159 376 534 2.06e-32 120
Msa0655060 AT4G18840.3 35.220 159 103 0 1 159 376 534 2.06e-32 120
Msa0655060 AT4G18840.2 35.220 159 103 0 1 159 376 534 2.06e-32 120
Msa0655060 AT3G50420.2 37.342 158 97 2 3 159 552 708 2.22e-32 121
Msa0655060 AT3G13770.1 36.875 160 99 2 1 158 326 485 2.39e-32 121
Msa0655060 AT3G25060.1 35.625 160 103 0 1 160 389 548 2.48e-32 121
Msa0655060 AT5G08490.8 33.962 159 105 0 1 159 639 797 2.69e-32 121
Msa0655060 AT5G08490.3 33.962 159 105 0 1 159 639 797 2.69e-32 121
Msa0655060 AT5G08490.1 33.962 159 105 0 1 159 639 797 2.69e-32 121
Msa0655060 AT3G56550.2 35.625 160 103 0 1 160 280 439 2.85e-32 120
Msa0655060 AT3G56550.1 35.625 160 103 0 1 160 280 439 2.85e-32 120
Msa0655060 AT2G03380.1 35.849 159 102 0 1 159 517 675 3.11e-32 121
Msa0655060 AT5G50390.1 39.583 144 87 0 1 144 397 540 3.99e-32 120
Msa0655060 AT1G03540.1 33.962 159 104 1 1 158 434 592 5.36e-32 120
Msa0655060 AT1G62260.1 34.591 159 104 0 1 159 481 639 1.19e-31 119
Msa0655060 AT4G31070.1 36.875 160 99 2 1 159 436 594 1.87e-31 118
Msa0655060 AT4G31070.2 36.875 160 99 2 1 159 436 594 1.87e-31 118
Msa0655060 AT2G36980.3 34.568 162 102 1 1 158 257 418 1.98e-31 117
Msa0655060 AT5G61800.1 36.478 159 97 1 1 155 321 479 2.31e-31 117
Msa0655060 AT1G06143.1 33.750 160 106 0 1 160 359 518 2.33e-31 118
Msa0655060 AT1G77010.1 31.875 160 109 0 1 160 522 681 2.55e-31 118
Msa0655060 AT1G04840.1 37.107 159 100 0 1 159 365 523 3.94e-31 117
Msa0655060 AT4G15720.1 36.646 161 100 1 1 159 308 468 4.05e-31 117
Msa0655060 AT2G36980.2 34.568 162 102 1 1 158 400 561 4.56e-31 117
Msa0655060 AT2G36980.1 34.568 162 102 1 1 158 409 570 4.63e-31 117
Msa0655060 AT4G35130.1 34.375 160 105 0 1 160 503 662 4.72e-31 117
Msa0655060 AT5G52630.1 34.375 160 104 1 1 160 289 447 6.00e-31 117
Msa0655060 AT2G33680.3 33.962 159 105 0 1 159 559 717 7.06e-31 117
Msa0655060 AT2G33680.2 33.962 159 105 0 1 159 559 717 7.06e-31 117
Msa0655060 AT2G33680.4 33.962 159 105 0 1 159 559 717 7.06e-31 117
Msa0655060 AT2G33680.5 33.962 159 105 0 1 159 570 728 7.88e-31 117
Msa0655060 AT2G33680.6 33.962 159 105 0 1 159 550 708 7.99e-31 117
Msa0655060 AT2G33680.1 33.962 159 105 0 1 159 495 653 8.49e-31 117
Msa0655060 AT2G33680.8 33.962 159 105 0 1 159 495 653 8.49e-31 117
Msa0655060 AT2G33680.7 33.962 159 105 0 1 159 495 653 8.49e-31 117
Msa0655060 AT1G77170.1 33.962 159 105 0 1 159 292 450 9.38e-31 115
Msa0655060 AT3G08820.1 34.810 158 103 0 2 159 386 543 1.14e-30 116
Msa0655060 AT1G53600.1 34.940 166 102 1 1 160 510 675 1.44e-30 116
Msa0655060 AT1G53600.2 34.940 166 102 1 1 160 510 675 1.44e-30 116
Msa0655060 AT2G04860.1 35.000 160 104 0 1 160 521 680 1.46e-30 116
Msa0655060 AT1G34160.2 34.591 159 103 1 1 159 232 389 1.80e-30 115
Msa0655060 AT3G14730.1 33.333 159 106 0 1 159 439 597 2.15e-30 115
Msa0655060 AT4G38010.1 37.267 161 99 2 1 159 378 538 2.40e-30 115
Msa0655060 AT1G34160.1 34.591 159 103 1 1 159 279 436 2.40e-30 115
Msa0655060 AT3G16610.1 35.000 160 102 2 1 159 481 639 5.10e-30 114
Msa0655060 AT1G31430.2 34.356 163 104 1 1 160 351 513 6.92e-30 114
Msa0655060 AT1G31430.1 34.356 163 104 1 1 160 351 513 6.92e-30 114
Msa0655060 AT1G10330.1 34.177 158 104 0 1 158 295 452 7.93e-30 113
Msa0655060 AT3G18840.3 36.875 160 100 1 1 159 465 624 4.78e-29 112
Msa0655060 AT3G18840.2 36.875 160 100 1 1 159 465 624 4.78e-29 112
Msa0655060 AT1G32415.1 36.420 162 99 1 1 158 540 701 6.69e-29 111
Msa0655060 AT2G17210.1 38.037 163 97 3 1 160 520 681 7.30e-29 111
Msa0655060 AT1G05750.1 31.875 160 108 1 1 159 278 437 1.27e-28 110
Msa0655060 AT1G05750.2 31.875 160 108 1 1 159 278 437 1.27e-28 110
Msa0655060 AT4G25270.1 32.468 154 103 1 8 160 369 522 1.99e-28 109
Msa0655060 AT3G18970.1 31.138 167 108 1 1 160 294 460 9.73e-28 107
Msa0655060 AT2G46050.1 33.333 156 103 1 1 156 414 568 1.39e-27 107
Msa0655060 AT2G37310.1 31.447 159 109 0 1 159 438 596 4.47e-27 106
Msa0655060 AT5G15340.1 31.447 159 107 2 1 159 323 479 8.29e-27 105
Msa0655060 AT5G66500.1 36.471 170 95 4 1 160 353 519 2.05e-26 104
Msa0655060 AT5G52850.1 32.500 160 108 0 1 160 600 759 3.79e-26 103
Msa0655060 AT1G71420.1 34.965 143 89 2 1 142 441 580 4.19e-26 103
Msa0655060 AT3G13770.2 33.333 162 100 3 1 158 295 452 5.99e-26 103
Msa0655060 AT2G39620.1 33.333 159 99 1 1 159 676 827 7.25e-26 103
Msa0655060 AT1G22830.1 32.919 161 107 1 1 160 496 656 8.88e-26 102
Msa0655060 AT1G22830.2 32.919 161 107 1 1 160 496 656 8.88e-26 102
Msa0655060 AT5G08305.1 32.075 159 107 1 1 159 315 472 1.62e-25 101
Msa0655060 AT3G51320.1 30.675 163 110 1 1 160 322 484 2.42e-25 101
Msa0655060 AT4G04370.1 33.540 161 103 2 1 159 520 678 2.47e-25 101
Msa0655060 AT5G55740.1 30.818 159 110 0 1 159 619 777 8.12e-25 100
Msa0655060 AT3G61170.1 32.075 159 104 1 1 159 471 625 9.40e-25 99.8
Msa0655060 AT5G47460.1 31.707 164 108 3 1 160 392 555 1.77e-24 99.0
Msa0655060 AT4G22760.1 34.783 161 102 3 1 160 403 561 3.33e-24 98.2
Msa0655060 AT1G64310.1 32.298 161 108 1 1 160 380 540 5.01e-24 97.4
Msa0655060 AT3G21470.1 32.317 164 104 3 1 159 346 507 1.09e-23 96.7
Msa0655060 AT2G34400.1 32.121 165 100 4 1 160 406 563 1.52e-23 96.3
Msa0655060 AT3G22690.3 34.899 149 66 1 12 160 553 670 5.26e-23 94.7
Msa0655060 AT5G08490.4 30.189 159 107 1 1 159 608 762 1.40e-22 93.6
Msa0655060 AT3G28660.1 30.000 160 107 2 1 155 291 450 3.45e-22 92.4
Msa0655060 AT3G58590.1 37.391 115 71 1 1 115 618 731 7.25e-22 91.7
Msa0655060 AT3G28640.1 30.000 160 107 2 1 155 291 450 8.00e-22 91.3
Msa0655060 AT5G03800.1 28.395 162 114 1 1 160 593 754 9.91e-21 88.2
Msa0655060 AT1G19720.1 28.750 160 114 0 1 160 596 755 3.90e-20 86.7
Msa0655060 AT2G15690.1 33.333 129 86 0 1 129 308 436 9.87e-20 85.5
Msa0655060 AT1G43980.1 27.517 149 107 1 13 160 431 579 5.57e-19 83.2
Msa0655060 AT2G25580.2 29.457 129 91 0 1 129 326 454 2.11e-15 72.8
Msa0655060 AT2G25580.1 29.457 129 91 0 1 129 326 454 2.11e-15 72.8
Msa0655060 AT1G29710.1 29.688 128 90 0 1 128 191 318 3.08e-14 69.3
Msa0655060 AT1G71460.1 36.364 88 56 0 1 88 591 678 6.10e-13 65.9
Msa0655060 AT3G26540.1 26.271 118 87 0 8 125 575 692 8.98e-13 65.5
Msa0655060 AT2G34370.1 28.125 128 92 0 1 128 180 307 1.00e-12 65.1
Msa0655060 AT4G32450.1 27.344 128 91 1 1 128 253 378 7.64e-12 62.8

Find 42 sgRNAs with CRISPR-Local

Find 39 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTACCATCTAGTCTTTCA+TGG 0.229534 4_3:+63492312 None:intergenic
TAAGCGCGGACGCTGTTATA+TGG 0.276573 4_3:-63492501 Msa0655060:CDS
AGTTCAATGATCGCTGCTTA+TGG 0.282018 4_3:-63492787 None:intergenic
TGATATGGAGAAGGAGAATT+TGG 0.301337 4_3:-63492725 Msa0655060:CDS
GGGTTGCTGAAGAAGTTCTT+AGG 0.323118 4_3:-63492426 Msa0655060:CDS
CATATCATTGAATAGCTTGA+TGG 0.325294 4_3:+63492741 None:intergenic
AGAAACATTCTGCCACCTTT+TGG 0.329715 4_3:+63492348 None:intergenic
CATTGTGGACTGAAGGATAA+AGG 0.345019 4_3:-63492658 Msa0655060:CDS
CATCAAGCTATTCAATGATA+TGG 0.352741 4_3:-63492740 Msa0655060:CDS
CGGCAGGTCTGGTTGTTTAG+AGG 0.356170 4_3:-63492554 Msa0655060:CDS
GCTTCATACGTTCTAATTGC+TGG 0.367911 4_3:-63492385 Msa0655060:CDS
TTGCCATTTCTTCATTCTTG+TGG 0.376027 4_3:+63492452 None:intergenic
GTTCAATGATCGCTGCTTAT+GGG 0.380482 4_3:-63492786 None:intergenic
ATAACAGCGTCCGCGCTTAC+AGG 0.405889 4_3:+63492505 None:intergenic
AATCCACAAGAATGAAGAAA+TGG 0.426252 4_3:-63492455 Msa0655060:CDS
GTTGACCTACTCGGCAGGTC+TGG 0.451026 4_3:-63492565 Msa0655060:CDS
ATCGCTGCTTATGGGTTTCA+CGG 0.455186 4_3:-63492778 Msa0655060:CDS
GACATGATGGTAGAGAAGTA+TGG 0.460194 4_3:-63492622 Msa0655060:CDS
GCAATTAGAACGTATGAAGC+TGG 0.466724 4_3:+63492388 None:intergenic
ATTGTGGACTGAAGGATAAA+GGG 0.469427 4_3:-63492657 Msa0655060:CDS
GCTTGATTTCTTTGACATGA+TGG 0.491304 4_3:-63492635 Msa0655060:CDS
CTATATGCTTGTAGTCATTG+TGG 0.496881 4_3:-63492673 Msa0655060:CDS
GTATTCATGCTTCAGCCAAA+AGG 0.520354 4_3:-63492363 Msa0655060:CDS
GAATGAAGAAATGGCAAGAA+GGG 0.524677 4_3:-63492446 Msa0655060:CDS
ATGGAGAAGGAGAATTTGGC+GGG 0.529411 4_3:-63492721 Msa0655060:CDS
ACTTGTGTGGTTGACCTACT+CGG 0.537166 4_3:-63492574 Msa0655060:CDS
AGAATGAAGAAATGGCAAGA+AGG 0.547912 4_3:-63492447 Msa0655060:CDS
TATGGAGAAGGAGAATTTGG+CGG 0.548329 4_3:-63492722 Msa0655060:CDS
ACGTATGAAGCTGGGTCTTG+AGG 0.555835 4_3:+63492397 None:intergenic
CAATTAGAACGTATGAAGCT+GGG 0.572807 4_3:+63492389 None:intergenic
CAGGTCTGGTTGTTTAGAGG+AGG 0.572812 4_3:-63492551 Msa0655060:CDS
GTGTGGTTGACCTACTCGGC+AGG 0.574371 4_3:-63492570 Msa0655060:CDS
TGGTTGTTTAGAGGAGGCAG+AGG 0.581895 4_3:-63492545 Msa0655060:CDS
GCTATTCAATGATATGGAGA+AGG 0.586076 4_3:-63492734 Msa0655060:CDS
GGCAGAATGTTTCTGAGGTG+AGG 0.587218 4_3:-63492339 Msa0655060:CDS
GGTAGAGAAGTATGGACTCA+AGG 0.592532 4_3:-63492614 Msa0655060:CDS
ACGATTCTTGCCTGTAAGCG+CGG 0.606966 4_3:-63492515 Msa0655060:CDS
TTGTAGTCATTGTGGACTGA+AGG 0.632407 4_3:-63492665 Msa0655060:CDS
TTCATGCTTCAGCCAAAAGG+TGG 0.641098 4_3:-63492360 Msa0655060:CDS
ACTAGAACACTATACTTGTG+TGG 0.642421 4_3:-63492587 Msa0655060:CDS
AACAACCAGACCTGCCGAGT+AGG 0.650829 4_3:+63492560 None:intergenic
AAGGTGGCAGAATGTTTCTG+AGG 0.660386 4_3:-63492344 Msa0655060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
CATATCATTGAATAGCTTGA+TGG + chr4_3:63492364-63492383 None:intergenic 30.0%
CATCAAGCTATTCAATGATA+TGG - chr4_3:63492362-63492381 Msa0655060:CDS 30.0%
AATCCACAAGAATGAAGAAA+TGG - chr4_3:63492647-63492666 Msa0655060:CDS 30.0%
GCTATTCAATGATATGGAGA+AGG - chr4_3:63492368-63492387 Msa0655060:CDS 35.0%
TGATATGGAGAAGGAGAATT+TGG - chr4_3:63492377-63492396 Msa0655060:CDS 35.0%
CTATATGCTTGTAGTCATTG+TGG - chr4_3:63492429-63492448 Msa0655060:CDS 35.0%
! ATTGTGGACTGAAGGATAAA+GGG - chr4_3:63492445-63492464 Msa0655060:CDS 35.0%
GCTTGATTTCTTTGACATGA+TGG - chr4_3:63492467-63492486 Msa0655060:CDS 35.0%
ACTAGAACACTATACTTGTG+TGG - chr4_3:63492515-63492534 Msa0655060:CDS 35.0%
! TTGCCATTTCTTCATTCTTG+TGG + chr4_3:63492653-63492672 None:intergenic 35.0%
AGAATGAAGAAATGGCAAGA+AGG - chr4_3:63492655-63492674 Msa0655060:CDS 35.0%
GAATGAAGAAATGGCAAGAA+GGG - chr4_3:63492656-63492675 Msa0655060:CDS 35.0%
CAATTAGAACGTATGAAGCT+GGG + chr4_3:63492716-63492735 None:intergenic 35.0%
TATGGAGAAGGAGAATTTGG+CGG - chr4_3:63492380-63492399 Msa0655060:CDS 40.0%
! TTGTAGTCATTGTGGACTGA+AGG - chr4_3:63492437-63492456 Msa0655060:CDS 40.0%
! CATTGTGGACTGAAGGATAA+AGG - chr4_3:63492444-63492463 Msa0655060:CDS 40.0%
GACATGATGGTAGAGAAGTA+TGG - chr4_3:63492480-63492499 Msa0655060:CDS 40.0%
GCAATTAGAACGTATGAAGC+TGG + chr4_3:63492717-63492736 None:intergenic 40.0%
GCTTCATACGTTCTAATTGC+TGG - chr4_3:63492717-63492736 Msa0655060:CDS 40.0%
GTATTCATGCTTCAGCCAAA+AGG - chr4_3:63492739-63492758 Msa0655060:CDS 40.0%
! AGAAACATTCTGCCACCTTT+TGG + chr4_3:63492757-63492776 None:intergenic 40.0%
ATCGCTGCTTATGGGTTTCA+CGG - chr4_3:63492324-63492343 Msa0655060:CDS 45.0%
ATGGAGAAGGAGAATTTGGC+GGG - chr4_3:63492381-63492400 Msa0655060:CDS 45.0%
! GGTAGAGAAGTATGGACTCA+AGG - chr4_3:63492488-63492507 Msa0655060:CDS 45.0%
ACTTGTGTGGTTGACCTACT+CGG - chr4_3:63492528-63492547 Msa0655060:CDS 45.0%
GGGTTGCTGAAGAAGTTCTT+AGG - chr4_3:63492676-63492695 Msa0655060:CDS 45.0%
TTCATGCTTCAGCCAAAAGG+TGG - chr4_3:63492742-63492761 Msa0655060:CDS 45.0%
! AAGGTGGCAGAATGTTTCTG+AGG - chr4_3:63492758-63492777 Msa0655060:CDS 45.0%
CAGGTCTGGTTGTTTAGAGG+AGG - chr4_3:63492551-63492570 Msa0655060:CDS 50.0%
TGGTTGTTTAGAGGAGGCAG+AGG - chr4_3:63492557-63492576 Msa0655060:CDS 50.0%
ACGATTCTTGCCTGTAAGCG+CGG - chr4_3:63492587-63492606 Msa0655060:CDS 50.0%
TAAGCGCGGACGCTGTTATA+TGG - chr4_3:63492601-63492620 Msa0655060:CDS 50.0%
ACGTATGAAGCTGGGTCTTG+AGG + chr4_3:63492708-63492727 None:intergenic 50.0%
!! GGCAGAATGTTTCTGAGGTG+AGG - chr4_3:63492763-63492782 Msa0655060:CDS 50.0%
AACAACCAGACCTGCCGAGT+AGG + chr4_3:63492545-63492564 None:intergenic 55.0%
CGGCAGGTCTGGTTGTTTAG+AGG - chr4_3:63492548-63492567 Msa0655060:CDS 55.0%
ATAACAGCGTCCGCGCTTAC+AGG + chr4_3:63492600-63492619 None:intergenic 55.0%
GTGTGGTTGACCTACTCGGC+AGG - chr4_3:63492532-63492551 Msa0655060:CDS 60.0%
GTTGACCTACTCGGCAGGTC+TGG - chr4_3:63492537-63492556 Msa0655060:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 63492321 63492803 63492321 ID=Msa0655060;Name=Msa0655060
chr4_3 mRNA 63492321 63492803 63492321 ID=Msa0655060-mRNA-1;Parent=Msa0655060;Name=Msa0655060-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|160
chr4_3 exon 63492321 63492803 63492321 ID=Msa0655060-mRNA-1:exon:17880;Parent=Msa0655060-mRNA-1
chr4_3 CDS 63492321 63492803 63492321 ID=Msa0655060-mRNA-1:cds;Parent=Msa0655060-mRNA-1
Gene Sequence

>Msa0655060

ATGATCGCTGCTTATGGGTTTCACGGTCAATGTGAAAAAGCCATCAAGCTATTCAATGATATGGAGAAGGAGAATTTGGCGGGAAATGAAGTTACTTTCTTGAGTTTGCTATATGCTTGTAGTCATTGTGGACTGAAGGATAAAGGGCTTGATTTCTTTGACATGATGGTAGAGAAGTATGGACTCAAGGCGAGACTAGAACACTATACTTGTGTGGTTGACCTACTCGGCAGGTCTGGTTGTTTAGAGGAGGCAGAGGCTATGATACGATTCTTGCCTGTAAGCGCGGACGCTGTTATATGGAAAACATTGTTATCTGCATGTAAAATCCACAAGAATGAAGAAATGGCAAGAAGGGTTGCTGAAGAAGTTCTTAGGATTGATCCTCAAGACCCAGCTTCATACGTTCTAATTGCTGGTATTCATGCTTCAGCCAAAAGGTGGCAGAATGTTTCTGAGGTGAGGAGAGCCATGAAAGACTAG
Protein sequence

>Msa0655060

MIAAYGFHGQCEKAIKLFNDMEKENLAGNEVTFLSLLYACSHCGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAEAMIRFLPVSADAVIWKTLLSACKIHKNEEMARRVAEEVLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKD*