AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0655950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0655950 MtrunA17_Chr8g0376071 97.436 117 3 0 1 117 268 384 2.64e-81 243
Msa0655950 MtrunA17_Chr6g0483721 70.085 117 35 0 1 117 285 401 1.94e-57 182
Msa0655950 MtrunA17_Chr1g0209341 61.468 109 42 0 1 109 298 406 1.23e-42 144
Msa0655950 MtrunA17_Chr4g0067961 51.282 117 56 1 1 117 280 395 8.78e-33 118
Msa0655950 MtrunA17_Chr2g0294991 47.009 117 58 1 1 117 340 452 2.00e-30 112
Msa0655950 MtrunA17_Chr4g0022111 37.273 110 67 2 1 109 192 300 5.51e-19 79.7
Msa0655950 MtrunA17_Chr2g0324081 36.937 111 67 3 1 109 199 308 1.68e-18 78.6
Msa0655950 MtrunA17_Chr1g0195091 36.752 117 65 3 1 116 31 139 4.65e-16 69.3
Msa0655950 MtrunA17_Chr1g0188731 33.071 127 67 4 1 109 212 338 3.68e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0655950 AT1G15030.1 59.633 109 41 2 2 109 251 357 1.61e-38 132
Msa0655950 AT2G01260.1 55.556 108 45 1 2 109 262 366 7.46e-35 123
Msa0655950 AT5G49220.1 48.214 112 51 1 1 112 300 404 9.31e-31 113
Msa0655950 AT4G16100.1 42.478 113 61 2 1 112 279 388 6.12e-23 92.0
Msa0655950 AT1G03610.1 37.615 109 67 1 1 109 192 299 8.48e-21 85.1
Msa0655950 AT4G03420.1 36.283 113 65 3 1 109 194 303 6.81e-18 77.4
Msa0655950 AT1G17830.1 33.898 118 69 2 1 109 214 331 6.80e-16 72.0
Msa0655950 AT4G28150.2 33.010 103 52 2 1 103 185 270 7.55e-14 66.2
Msa0655950 AT1G15030.2 87.097 31 4 0 6 36 255 285 7.89e-14 66.2
Msa0655950 AT4G28150.1 33.010 103 52 2 1 103 187 272 7.90e-14 66.2
Msa0655950 AT1G73210.3 35.088 114 68 3 1 109 197 309 8.31e-14 66.2
Msa0655950 AT1G73210.1 35.088 114 68 3 1 109 197 309 8.31e-14 66.2
Msa0655950 AT1G73210.2 35.088 114 68 3 1 109 195 307 8.39e-14 66.2
Msa0655950 AT2G01260.2 87.097 31 4 0 6 36 266 296 5.72e-13 63.9

Find 140 sgRNAs with CRISPR-Local

Find 732 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAGATCCCTTTAATTTAT+AGG 0.179141 4_3:-64960126 None:intergenic
GCTGAGACCCCTTTAATTTC+TGG 0.180813 4_3:+64960654 Msa0655950:three_prime_UTR
ATAAATTAAAGGGATCTATT+TGG 0.209391 4_3:+64960129 Msa0655950:CDS
CTTGGATTCCACAAAGTTAT+TGG 0.224982 4_3:+64950958 Msa0655950:five_prime_UTR
ACTTTGCTCTGAATGATCTA+TGG 0.228571 4_3:+64951727 Msa0655950:five_prime_UTR
AATGGCTGCCTATAAATTAA+AGG 0.234653 4_3:+64960118 Msa0655950:CDS
GGAAGCAGTGATTGCGAATA+TGG 0.267161 4_3:+64955715 Msa0655950:five_prime_UTR
GCACCACGGCAATGAAATTA+AGG 0.269679 4_3:-64960331 None:intergenic
TGATCTATGGGAATCGTTTA+AGG 0.293061 4_3:+64951740 Msa0655950:five_prime_UTR
AGTAGTGATGACAGTGAAAC+TGG 0.302541 4_3:+64955859 Msa0655950:five_prime_UTR
TATTTATGTCCAGAAATTAA+AGG 0.311748 4_3:-64960663 None:intergenic
TTCCTCTACTCAAATGGTTA+TGG 0.311910 4_3:-64960956 None:intergenic
TTTAAGGAGTGGAGTGCTTA+TGG 0.330153 4_3:+64951756 Msa0655950:five_prime_UTR
AAAGTAGGGATGGAAATATT+TGG 0.332123 4_3:-64960092 None:intergenic
CTGGGTACTGCACTGCAATT+TGG 0.335190 4_3:+64950794 Msa0655950:five_prime_UTR
GTGATTGCGAATATGGAAAA+AGG 0.338454 4_3:+64955722 Msa0655950:five_prime_UTR
ATTTATGTCCAGAAATTAAA+GGG 0.346240 4_3:-64960662 None:intergenic
TCGTGCAGGCTGCAGATAAA+TGG 0.347650 4_3:+64960192 Msa0655950:CDS
TACAAATGAATTGAATGATA+TGG 0.349820 4_3:+64960275 Msa0655950:exon
TTGGAACAAGGTCATCCTTA+TGG 0.360520 4_3:+64955910 Msa0655950:five_prime_UTR
TTTAACCGAGGGAATATAAC+TGG 0.361005 4_3:-64960302 None:intergenic
TATAACAAACCAATTAAGTT+GGG 0.361518 4_3:+64950735 Msa0655950:five_prime_UTR
TAGTAACATTGATAGGTTCT+TGG 0.367105 4_3:+64950940 Msa0655950:five_prime_UTR
TTGTCGGCTATTCAGCTATA+TGG 0.370596 4_3:+64951840 Msa0655950:five_prime_UTR
GAGGATCAAGAAGGAGAAAC+AGG 0.379160 4_3:-64950606 None:intergenic
TTCTCTCTCTTATTTAGTTT+AGG 0.379861 4_3:-64950472 None:intergenic
TTGCTATGTCTATACAAAAC+GGG 0.383602 4_3:-64956157 None:intergenic
CCCTTTGATCAAGTAGTAAA+GGG 0.386917 4_3:-64951788 None:intergenic
TATACTAACTAACAAAGATT+TGG 0.392359 4_3:-64960849 None:intergenic
ATATGTTAGTGTTATGTTGT+TGG 0.402315 4_3:+64960869 Msa0655950:three_prime_UTR
TAGAAGAGATTGATCGGTAA+TGG 0.408613 4_3:-64950562 None:intergenic
AGTCTGTTAGTAACATTGAT+AGG 0.410081 4_3:+64950933 Msa0655950:five_prime_UTR
GTACTATGTTCCGTATTTGT+CGG 0.410526 4_3:+64951824 Msa0655950:five_prime_UTR
TCCTACTCCTGGTCCTGTAC+TGG 0.411890 4_3:+64960043 Msa0655950:CDS
CCTTGTCAGCCAGCGGTTCA+CGG 0.419823 4_3:-64955933 None:intergenic
CCCTTTACTACTTGATCAAA+GGG 0.420560 4_3:+64951788 Msa0655950:five_prime_UTR
TAAATGGTTAAGGCTAGTTC+AGG 0.422552 4_3:+64960208 Msa0655950:CDS
GTTTATTTCCTCTACTCAAA+TGG 0.422701 4_3:-64960962 None:intergenic
TGTGTGGTGTGGCACAATTT+TGG 0.423773 4_3:+64960737 Msa0655950:three_prime_UTR
TCCTTATGGCCGTGAACCGC+TGG 0.427561 4_3:+64955924 Msa0655950:five_prime_UTR
AAGTATTTACAGTTCAATAA+TGG 0.431819 4_3:+64960632 Msa0655950:three_prime_UTR
ATGGCTGCCTATAAATTAAA+GGG 0.433226 4_3:+64960119 Msa0655950:CDS
TTATAACAAACCAATTAAGT+TGG 0.438912 4_3:+64950734 Msa0655950:five_prime_UTR
AATTACCTGTCAAGGGTGTA+TGG 0.444633 4_3:-64956323 None:intergenic
AGTGGAACTCCCTTCTGAAA+AGG 0.448655 4_3:+64960529 Msa0655950:three_prime_UTR
GAGAAGAGACACCACTTGTC+AGG 0.454698 4_3:-64955780 None:intergenic
TGATTCTTTCTTGTCTTCAC+CGG 0.457385 4_3:-64950839 None:intergenic
TCCCTTTGATCAAGTAGTAA+AGG 0.457484 4_3:-64951789 None:intergenic
GTGGAACTCCCTTCTGAAAA+GGG 0.458254 4_3:+64960530 Msa0655950:three_prime_UTR
TGAACTGTAAATACTTGTAC+AGG 0.460921 4_3:-64960625 None:intergenic
CTTGCTATGTCTATACAAAA+CGG 0.468123 4_3:-64956158 None:intergenic
GCAACAGACATCCAACTGTT+TGG 0.468240 4_3:-64956098 None:intergenic
CTTTGCTCTGAATGATCTAT+GGG 0.469746 4_3:+64951728 Msa0655950:five_prime_UTR
GGTTGTGACAGCCTAGTTGT+AGG 0.470124 4_3:+64960398 Msa0655950:three_prime_UTR
AATATGAAACAAAAGTTAAG+TGG 0.471447 4_3:+64960563 Msa0655950:three_prime_UTR
TAGGCAGCCATTGCAAAAGT+AGG 0.473321 4_3:-64960107 None:intergenic
GATTTAAAGAACTGATGATC+CGG 0.473580 4_3:-64960239 None:intergenic
GTTGTGATAATAGAAGAAAA+TGG 0.480423 4_3:+64960695 Msa0655950:three_prime_UTR
TGCAATTTGGTGGTGATGAT+CGG 0.482447 4_3:+64950807 Msa0655950:five_prime_UTR
AAGAAAGGATTGGAAAATGC+TGG 0.482548 4_3:+64950775 Msa0655950:five_prime_UTR
CCGTGAACCGCTGGCTGACA+AGG 0.488317 4_3:+64955933 Msa0655950:five_prime_UTR
CCTGTGGGTATTCGATATAT+AGG 0.490923 4_3:-64956252 None:intergenic
ATTGTTATATATCTTAACTC+TGG 0.499180 4_3:+64960925 Msa0655950:three_prime_UTR
GCAGGAAGTGGTCCTACTCC+TGG 0.503247 4_3:+64960032 Msa0655950:intron
TCCCTTTACTACTTGATCAA+AGG 0.504346 4_3:+64951787 Msa0655950:five_prime_UTR
AGCTGAATAGCCGACAAATA+CGG 0.507690 4_3:-64951834 None:intergenic
GAGTGGAGTGCTTATGGTGC+TGG 0.509550 4_3:+64951762 Msa0655950:five_prime_UTR
CATCAGTTCTTTAAATCGCA+TGG 0.513728 4_3:+64960245 Msa0655950:CDS
TGAACATATTGTTGCTCTGA+TGG 0.517078 4_3:+64960770 Msa0655950:three_prime_UTR
ATCGGTAATGGATGATTGAA+AGG 0.519623 4_3:-64950550 None:intergenic
GCCAGCGGTTCACGGCCATA+AGG 0.520857 4_3:-64955925 None:intergenic
TGGTACACCATCCATCTCAC+TGG 0.523799 4_3:-64960072 None:intergenic
AAATTTGCGAAAGAAAGGAT+TGG 0.524883 4_3:+64950765 Msa0655950:five_prime_UTR
AATTTCATAATTACCTGTCA+AGG 0.525386 4_3:-64956331 None:intergenic
TCAAGGGTGTATGGAGTGTA+TGG 0.527173 4_3:-64956314 None:intergenic
GAGAGACAAGAATGTTGAAG+AGG 0.528313 4_3:+64950883 Msa0655950:five_prime_UTR
AGCTGGAACCAATAACTTTG+TGG 0.532701 4_3:-64950966 None:intergenic
ATAACAAACCAATTAAGTTG+GGG 0.533368 4_3:+64950736 Msa0655950:five_prime_UTR
TGGAACTCCCTTCTGAAAAG+GGG 0.533991 4_3:+64960531 Msa0655950:three_prime_UTR
AGGCTGCAGATAAATGGTTA+AGG 0.534889 4_3:+64960198 Msa0655950:CDS
CAAGAAGGAGAAACAGGAAG+TGG 0.538321 4_3:-64950600 None:intergenic
GGGTGTATGGAGTGTATGGT+AGG 0.540087 4_3:-64956310 None:intergenic
TCCAGCTCAGTATTTCTCCA+AGG 0.541108 4_3:+64950982 Msa0655950:five_prime_UTR
ACAAATACGGAACATAGTAC+TGG 0.541312 4_3:-64951821 None:intergenic
ACACTCCATACACCCTTGAC+AGG 0.545222 4_3:+64956318 Msa0655950:CDS
GGTACTGCACTGCAATTTGG+TGG 0.551407 4_3:+64950797 Msa0655950:five_prime_UTR
ATTTCATAATTACCTGTCAA+GGG 0.551433 4_3:-64956330 None:intergenic
AGCCATAACCATTTGAGTAG+AGG 0.551847 4_3:+64960954 Msa0655950:three_prime_UTR
AGTAATGAATTCCCTCGTGC+AGG 0.552196 4_3:+64960178 Msa0655950:CDS
GCCATCACAATCTCTACAGA+TGG 0.553868 4_3:-64960373 None:intergenic
TCACTGGGATAAACCAGTAC+AGG 0.565356 4_3:-64960056 None:intergenic
AAGCCTTAATTTCATTGCCG+TGG 0.572215 4_3:+64960328 Msa0655950:three_prime_UTR
GAAATGTCAATACCTTGGCT+TGG 0.573993 4_3:-64951886 None:intergenic
ACCTTGGAGAAATACTGAGC+TGG 0.575271 4_3:-64950983 None:intergenic
GTGATTTATTGCCAAACAGT+TGG 0.575495 4_3:+64956087 Msa0655950:five_prime_UTR
ATTTATCTGCAGCCTGCACG+AGG 0.576191 4_3:-64960190 None:intergenic
AGGCAGCCATTGCAAAAGTA+GGG 0.576587 4_3:-64960106 None:intergenic
GCATGCCAGTTATATTCCCT+CGG 0.577795 4_3:+64960297 Msa0655950:three_prime_UTR
TACAGAGATTCATGTAGTGA+AGG 0.580192 4_3:+64955694 Msa0655950:five_prime_UTR
ACAGATTAACAGAGTATGTG+TGG 0.580632 4_3:+64960591 Msa0655950:three_prime_UTR
AGAAAGGATTGGAAAATGCT+GGG 0.581921 4_3:+64950776 Msa0655950:five_prime_UTR
TGTAGACGACAATGAGAGGT+TGG 0.584962 4_3:+64951676 Msa0655950:intron
TCACAATCTCTACAGATGGA+TGG 0.585462 4_3:-64960369 None:intergenic
AATTTGTAGAAGAGATTGAT+CGG 0.586462 4_3:-64950568 None:intergenic
CTTCTCAATGACATGAGGGC+AGG 0.593498 4_3:-64956062 None:intergenic
ATATGAAACAAAAGTTAAGT+GGG 0.593807 4_3:+64960564 Msa0655950:three_prime_UTR
TGCTCTGATGGTAGGAGAGA+TGG 0.594256 4_3:+64960782 Msa0655950:three_prime_UTR
CTGTAAATACTTGTACAGGT+TGG 0.599629 4_3:-64960621 None:intergenic
GACATTGCCTTGTCAGCCAG+CGG 0.600162 4_3:-64955940 None:intergenic
AGCCATTGCAAAAGTAGGGA+TGG 0.600948 4_3:-64960102 None:intergenic
AAACACAATACAGTACAAGA+AGG 0.603124 4_3:+64955829 Msa0655950:five_prime_UTR
GGATAAACCAGTACAGGACC+AGG 0.604698 4_3:-64960050 None:intergenic
ATTTAAAGAACTGATGATCC+GGG 0.606138 4_3:-64960238 None:intergenic
TATGGGAATCGTTTAAGGAG+TGG 0.610261 4_3:+64951745 Msa0655950:five_prime_UTR
AGCAGTAAACACCTGACAAG+TGG 0.611354 4_3:+64955769 Msa0655950:five_prime_UTR
AAAAGTCGAGTGCCAAGCCA+AGG 0.611438 4_3:+64951874 Msa0655950:five_prime_UTR
CATATTGTTGCTCTGATGGT+AGG 0.612255 4_3:+64960774 Msa0655950:three_prime_UTR
CCTATATATCGAATACCCAC+AGG 0.618281 4_3:+64956252 Msa0655950:CDS
CACAACTTCTCAATGACATG+AGG 0.627272 4_3:-64956067 None:intergenic
CAGATTAACAGAGTATGTGT+GGG 0.634579 4_3:+64960592 Msa0655950:three_prime_UTR
GTAGTGATGACAGTGAAACT+GGG 0.640422 4_3:+64955860 Msa0655950:five_prime_UTR
ACTGGTTTATCCCAGTGAGA+TGG 0.640430 4_3:+64960061 Msa0655950:CDS
TAACAAACCAATTAAGTTGG+GGG 0.642221 4_3:+64950737 Msa0655950:five_prime_UTR
TGCTATGTCTATACAAAACG+GGG 0.642330 4_3:-64956156 None:intergenic
CTGTAGAGATTGTGATGGCA+CGG 0.642968 4_3:+64960377 Msa0655950:three_prime_UTR
GGAACTCCCTTCTGAAAAGG+GGG 0.643505 4_3:+64960532 Msa0655950:three_prime_UTR
GCTAGTTCAGGTGAATCACC+CGG 0.646489 4_3:+64960220 Msa0655950:CDS
CTTTAATAAAGTTTGCACCA+CGG 0.652638 4_3:-64960345 None:intergenic
TTTATGTCCAGAAATTAAAG+GGG 0.653418 4_3:-64960661 None:intergenic
TACATAAGTGAAGATAGTGA+TGG 0.653910 4_3:+64955664 Msa0655950:five_prime_UTR
ACAACTTCTCAATGACATGA+GGG 0.656739 4_3:-64956066 None:intergenic
GGTACACCATCCATCTCACT+GGG 0.664900 4_3:-64960071 None:intergenic
TCCATCTGTAGAGATTGTGA+TGG 0.666880 4_3:+64960372 Msa0655950:three_prime_UTR
ACCAGTACAGGACCAGGAGT+AGG 0.669545 4_3:-64960044 None:intergenic
ACAGTTGGATGTCTGTTGCA+TGG 0.675268 4_3:+64956102 Msa0655950:five_prime_UTR
CTAGATTTCACTGTGTGGTG+TGG 0.689111 4_3:+64960726 Msa0655950:three_prime_UTR
TTTATCTGCAGCCTGCACGA+GGG 0.693098 4_3:-64960189 None:intergenic
GTTTATCCCAGTGAGATGGA+TGG 0.699701 4_3:+64960065 Msa0655950:CDS
TGTCTGTAGACGACAATGAG+AGG 0.703177 4_3:+64951672 Msa0655950:intron
AAATACTAGATTTCACTGTG+TGG 0.735987 4_3:+64960721 Msa0655950:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGCTTATTATTTATATAAT+TGG + chr4_3:64951569-64951588 Msa0655950:intron 10.0%
!! TTATTATTTATATAATTGGA+TGG + chr4_3:64951573-64951592 Msa0655950:intron 10.0%
!! TAAAATTGCATAAATTATAA+AGG + chr4_3:64954432-64954451 Msa0655950:intron 10.0%
!! AAAATTGCATAAATTATAAA+GGG + chr4_3:64954433-64954452 Msa0655950:intron 10.0%
!!! TTTTCGAAATATAAATTTAT+TGG + chr4_3:64955252-64955271 Msa0655950:intron 10.0%
!!! TAAAATCGTATTTTGAAATT+TGG + chr4_3:64950704-64950723 Msa0655950:five_prime_UTR 15.0%
!!! AAAATCGTATTTTGAAATTT+GGG + chr4_3:64950705-64950724 Msa0655950:five_prime_UTR 15.0%
!!! TTCTAATCCTTAAATTTTAA+GGG - chr4_3:64951177-64951196 None:intergenic 15.0%
!!! TTTCTAATCCTTAAATTTTA+AGG - chr4_3:64951178-64951197 None:intergenic 15.0%
!! AAACTAAAAAGATAATTTGA+AGG + chr4_3:64953158-64953177 Msa0655950:intron 15.0%
!!! ATATCCAATTAAATGTTTTT+AGG + chr4_3:64953451-64953470 Msa0655950:intron 15.0%
!!! TATCCAATTAAATGTTTTTA+GGG + chr4_3:64953452-64953471 Msa0655950:intron 15.0%
!! AATTAGTAGTTAAGTATATT+GGG + chr4_3:64953825-64953844 Msa0655950:intron 15.0%
!!! ATGTTAATGAATGATTTTAA+AGG + chr4_3:64953860-64953879 Msa0655950:intron 15.0%
!! TCAAAAATACACAAAATTAA+AGG - chr4_3:64953914-64953933 None:intergenic 15.0%
!! AAATATTGTACAATATAAGA+TGG - chr4_3:64956012-64956031 None:intergenic 15.0%
!! ATCTTATATTGTACAATATT+TGG + chr4_3:64956011-64956030 Msa0655950:intron 15.0%
!!! TTAACAATAAGAATCTTTTA+AGG - chr4_3:64956477-64956496 None:intergenic 15.0%
!! GTATTATTAAGCAATAAAAA+GGG - chr4_3:64956671-64956690 None:intergenic 15.0%
!! TGTATTATTAAGCAATAAAA+AGG - chr4_3:64956672-64956691 None:intergenic 15.0%
!! ATGATGTTTATCATAATAAA+GGG + chr4_3:64956791-64956810 Msa0655950:intron 15.0%
!! TTAATCTATCAGAATAAAAA+AGG - chr4_3:64956936-64956955 None:intergenic 15.0%
!!! ATTTTCATAAAAATCTAGAA+AGG - chr4_3:64959635-64959654 None:intergenic 15.0%
!!! TTATATTTCATGTTTTTGAA+AGG - chr4_3:64959968-64959987 None:intergenic 15.0%
!! GAAAAAAGGAATATGTATAA+TGG - chr4_3:64950528-64950547 None:intergenic 20.0%
!! TTATAACAAACCAATTAAGT+TGG + chr4_3:64950734-64950753 Msa0655950:five_prime_UTR 20.0%
!! TATAACAAACCAATTAAGTT+GGG + chr4_3:64950735-64950754 Msa0655950:five_prime_UTR 20.0%
!! CTTTCAAAAAAAAAAAACCT+TGG - chr4_3:64951002-64951021 None:intergenic 20.0%
!!! TTTGAAAGTTTTTGATTTGT+TGG + chr4_3:64951014-64951033 Msa0655950:intron 20.0%
!!! TTTTCTATAATGTGTAACTA+CGG + chr4_3:64951111-64951130 Msa0655950:intron 20.0%
!! ATTTAGTCCCTTAAAATTTA+AGG + chr4_3:64951167-64951186 Msa0655950:intron 20.0%
!! AAGCATCTGAATAAAAAAAA+GGG - chr4_3:64951555-64951574 None:intergenic 20.0%
!! TAAGCATCTGAATAAAAAAA+AGG - chr4_3:64951556-64951575 None:intergenic 20.0%
!! TATTTATATAATTGGATGGA+TGG + chr4_3:64951577-64951596 Msa0655950:intron 20.0%
!!! TTTTGGTTATTATTGTTGTA+TGG + chr4_3:64951622-64951641 Msa0655950:intron 20.0%
!! TGTTATGTAAATTGTTCAAA+TGG + chr4_3:64952049-64952068 Msa0655950:intron 20.0%
!! AGAAAATAGAACAGATAAAT+TGG - chr4_3:64952340-64952359 None:intergenic 20.0%
!!! AGAATTTTATTCACTTTTCT+TGG - chr4_3:64952425-64952444 None:intergenic 20.0%
!!! AAATTGTTCTAAATTTGCTA+CGG + chr4_3:64952575-64952594 Msa0655950:intron 20.0%
!! ATAAAATGATGGCAATTAAA+AGG + chr4_3:64952873-64952892 Msa0655950:intron 20.0%
!! ATTTAATTGGATATAAGAGA+GGG - chr4_3:64953445-64953464 None:intergenic 20.0%
!! GAATTAGTAGTTAAGTATAT+TGG + chr4_3:64953824-64953843 Msa0655950:intron 20.0%
!! TTTGAATTTATGTATACTGT+TGG + chr4_3:64953929-64953948 Msa0655950:intron 20.0%
!! TTGAATTTATGTATACTGTT+GGG + chr4_3:64953930-64953949 Msa0655950:intron 20.0%
!! TCATACAAACATTTAAATGA+AGG + chr4_3:64954153-64954172 Msa0655950:intron 20.0%
!! TACATAACTAGAAATCAATT+TGG + chr4_3:64954525-64954544 Msa0655950:intron 20.0%
!! TTTAACTGTTTAGATGTAAT+TGG + chr4_3:64954941-64954960 Msa0655950:intron 20.0%
!! TTATCAATCATATAAGAAGA+GGG - chr4_3:64955060-64955079 None:intergenic 20.0%
!! ATTATCAATCATATAAGAAG+AGG - chr4_3:64955061-64955080 None:intergenic 20.0%
!! TCTTCTTATATGATTGATAA+TGG + chr4_3:64955060-64955079 Msa0655950:intron 20.0%
!!! TATATGATTGATAATGGATA+TGG + chr4_3:64955066-64955085 Msa0655950:intron 20.0%
!! TGAAGTAATATCATATACAT+TGG + chr4_3:64955310-64955329 Msa0655950:intron 20.0%
!!! CATTTTTTATGTCACTTTAT+AGG + chr4_3:64956226-64956245 Msa0655950:exon 20.0%
!!! CATCTAAATCTTTTAAAGTA+GGG - chr4_3:64956278-64956297 None:intergenic 20.0%
!! TTCTTATTGTTAATTAACCT+TGG + chr4_3:64956484-64956503 Msa0655950:intron 20.0%
!! GATGATGTTTATCATAATAA+AGG + chr4_3:64956790-64956809 Msa0655950:intron 20.0%
!! ACTGATATTATATAGGATAA+AGG - chr4_3:64956886-64956905 None:intergenic 20.0%
!! TATTCTGATAGATTAAACAA+TGG + chr4_3:64956940-64956959 Msa0655950:intron 20.0%
!! ATTCTGATAGATTAAACAAT+GGG + chr4_3:64956941-64956960 Msa0655950:intron 20.0%
!! AGACAAAAAATGAAATTCAA+TGG - chr4_3:64956989-64957008 None:intergenic 20.0%
!! ATCTGTATTTATAAAAGTTG+AGG - chr4_3:64957052-64957071 None:intergenic 20.0%
!! TTACTTTAGCAAACAAAATA+TGG + chr4_3:64957155-64957174 Msa0655950:intron 20.0%
!! TACTTTAGCAAACAAAATAT+GGG + chr4_3:64957156-64957175 Msa0655950:intron 20.0%
!! ACTAAACAAATTTAGTTACA+AGG + chr4_3:64957304-64957323 Msa0655950:intron 20.0%
!! TCCAAAGACTATTAAATTAT+GGG - chr4_3:64958082-64958101 None:intergenic 20.0%
!! ATCCAAAGACTATTAAATTA+TGG - chr4_3:64958083-64958102 None:intergenic 20.0%
!! AATATACCTTAAAGATATTC+TGG + chr4_3:64958596-64958615 Msa0655950:intron 20.0%
!! AAACTTAATTAAATAGAACG+AGG - chr4_3:64959067-64959086 None:intergenic 20.0%
!! TCGTTCTATTTAATTAAGTT+TGG + chr4_3:64959066-64959085 Msa0655950:intron 20.0%
!! CGTTCTATTTAATTAAGTTT+GGG + chr4_3:64959067-64959086 Msa0655950:intron 20.0%
!! TATCAAAAACTTAAAACTGA+CGG + chr4_3:64959450-64959469 Msa0655950:intron 20.0%
!!! AATAGATCCCTTTAATTTAT+AGG - chr4_3:64960129-64960148 None:intergenic 20.0%
!! ATAAATTAAAGGGATCTATT+TGG + chr4_3:64960129-64960148 Msa0655950:CDS 20.0%
!! TACAAATGAATTGAATGATA+TGG + chr4_3:64960275-64960294 Msa0655950:exon 20.0%
!! GACATTAAAAAGAAAAAAAC+TGG + chr4_3:64960498-64960517 Msa0655950:three_prime_UTR 20.0%
!!! AAAAAACTGGTTTTTATAAG+TGG + chr4_3:64960511-64960530 Msa0655950:three_prime_UTR 20.0%
!! AATATGAAACAAAAGTTAAG+TGG + chr4_3:64960563-64960582 Msa0655950:three_prime_UTR 20.0%
!! ATATGAAACAAAAGTTAAGT+GGG + chr4_3:64960564-64960583 Msa0655950:three_prime_UTR 20.0%
!! AAGTATTTACAGTTCAATAA+TGG + chr4_3:64960632-64960651 Msa0655950:three_prime_UTR 20.0%
!! ATTTATGTCCAGAAATTAAA+GGG - chr4_3:64960665-64960684 None:intergenic 20.0%
!! TATTTATGTCCAGAAATTAA+AGG - chr4_3:64960666-64960685 None:intergenic 20.0%
!! TATACTAACTAACAAAGATT+TGG - chr4_3:64960852-64960871 None:intergenic 20.0%
!! ATTGTTATATATCTTAACTC+TGG + chr4_3:64960925-64960944 Msa0655950:three_prime_UTR 20.0%
!! TTCTCTCTCTTATTTAGTTT+AGG - chr4_3:64950475-64950494 None:intergenic 25.0%
! ATGATTGAAAGGAAGAAAAA+AGG - chr4_3:64950542-64950561 None:intergenic 25.0%
! AATTTGTAGAAGAGATTGAT+CGG - chr4_3:64950571-64950590 None:intergenic 25.0%
!!! TTTTCCAATACCATTTTTTC+TGG + chr4_3:64950645-64950664 Msa0655950:five_prime_UTR 25.0%
!!! TTTCCAATACCATTTTTTCT+GGG + chr4_3:64950646-64950665 Msa0655950:five_prime_UTR 25.0%
!! ATAACAAACCAATTAAGTTG+GGG + chr4_3:64950736-64950755 Msa0655950:five_prime_UTR 25.0%
! AAGAAAAATTTGCGAAAGAA+AGG + chr4_3:64950760-64950779 Msa0655950:five_prime_UTR 25.0%
!!! TGATTGATAAATCACTTTTG+CGG + chr4_3:64951390-64951409 Msa0655950:intron 25.0%
!!! ACATAGAATCTTTAAAATCG+TGG + chr4_3:64951420-64951439 Msa0655950:intron 25.0%
!!! ACTAAAATGACTGATTTTGT+AGG + chr4_3:64951461-64951480 Msa0655950:intron 25.0%
!! ATTTTGTAGGACTAAATTGA+TGG + chr4_3:64951474-64951493 Msa0655950:intron 25.0%
!!! AGATTATGTTTTGTTGTTGT+TGG + chr4_3:64952082-64952101 Msa0655950:intron 25.0%
! TTGTGATATATCTATACTGA+TGG + chr4_3:64952188-64952207 Msa0655950:intron 25.0%
! TGTGATATATCTATACTGAT+GGG + chr4_3:64952189-64952208 Msa0655950:intron 25.0%
!! TTTTACAAAAGACCAAGTAA+CGG - chr4_3:64952291-64952310 None:intergenic 25.0%
!! ATATTCTTCATTTTCCTTGA+GGG + chr4_3:64952449-64952468 Msa0655950:intron 25.0%
!! TAAACCATTTTGCTGAAATT+CGG + chr4_3:64952645-64952664 Msa0655950:intron 25.0%
! ATGACTTTCTACTATACAAA+AGG - chr4_3:64952764-64952783 None:intergenic 25.0%
!! AATTGCCATCATTTTATACT+CGG - chr4_3:64952870-64952889 None:intergenic 25.0%
! AATTAAAAGGTGAAAAGCAA+AGG + chr4_3:64952886-64952905 Msa0655950:intron 25.0%
! GATGAATAAAGTGATTAGAA+AGG + chr4_3:64952975-64952994 Msa0655950:intron 25.0%
! AATTCCTTATAACCTTAACT+TGG - chr4_3:64953080-64953099 None:intergenic 25.0%
! TTTGAAGGTTTATTGTCATT+AGG + chr4_3:64953173-64953192 Msa0655950:intron 25.0%
!! CTTTTTACAACATTGGATTT+CGG - chr4_3:64953262-64953281 None:intergenic 25.0%
! CATTTAATTGGATATAAGAG+AGG - chr4_3:64953446-64953465 None:intergenic 25.0%
! TAAGGAAACTTACTGAAATT+GGG - chr4_3:64953492-64953511 None:intergenic 25.0%
! TATGCAATTTATTGTTGTCA+CGG - chr4_3:64953589-64953608 None:intergenic 25.0%
! AATACACAAAATTAAAGGAG+TGG - chr4_3:64953909-64953928 None:intergenic 25.0%
! TTCTAATGTTCTTGAAGATA+GGG - chr4_3:64954407-64954426 None:intergenic 25.0%
! TTTCTAATGTTCTTGAAGAT+AGG - chr4_3:64954408-64954427 None:intergenic 25.0%
!!! AATTAGTTTTGAGTATCAAG+TGG + chr4_3:64954836-64954855 Msa0655950:intron 25.0%
! TGTAATTGGTTGAAAAAGTT+TGG + chr4_3:64954955-64954974 Msa0655950:intron 25.0%
!! ATCATTCTTTTTATTGCTTC+AGG + chr4_3:64955112-64955131 Msa0655950:intron 25.0%
!! TCATTCTTTTTATTGCTTCA+GGG + chr4_3:64955113-64955132 Msa0655950:intron 25.0%
! AAAATTGTATGGAATGAAGA+GGG - chr4_3:64955206-64955225 None:intergenic 25.0%
! GAAAAAAATTTAAGCGTTCT+TGG - chr4_3:64955237-64955256 None:intergenic 25.0%
!! CATTTTAGATCTCAATGTAT+TGG + chr4_3:64955363-64955382 Msa0655950:intron 25.0%
! CAAAATTAAAGTCACTAAGT+TGG - chr4_3:64955477-64955496 None:intergenic 25.0%
! AGTTATAATTGCAAAGAAGT+AGG - chr4_3:64955527-64955546 None:intergenic 25.0%
!! GTCTGATCTTAATTAATTTG+TGG + chr4_3:64955960-64955979 Msa0655950:intron 25.0%
! GAAAAAAAGGAAAGAAGTTA+AGG - chr4_3:64956137-64956156 None:intergenic 25.0%
!!! ATTAGTGCTGTTTTTTTTGT+TGG + chr4_3:64956199-64956218 Msa0655950:five_prime_UTR 25.0%
!!! GCATCTAAATCTTTTAAAGT+AGG - chr4_3:64956279-64956298 None:intergenic 25.0%
! ATTTCATAATTACCTGTCAA+GGG - chr4_3:64956333-64956352 None:intergenic 25.0%
! AATTTCATAATTACCTGTCA+AGG - chr4_3:64956334-64956353 None:intergenic 25.0%
!! GCTTTATACAACACTTATTT+TGG + chr4_3:64956386-64956405 Msa0655950:intron 25.0%
! TGAATGAATGTCACATTATT+TGG + chr4_3:64956450-64956469 Msa0655950:intron 25.0%
!! ATAATACAGTGTTATTGTGT+CGG + chr4_3:64956684-64956703 Msa0655950:intron 25.0%
! ATTGTATATGTCCAACAATA+AGG + chr4_3:64956758-64956777 Msa0655950:intron 25.0%
! TTGTATATGTCCAACAATAA+GGG + chr4_3:64956759-64956778 Msa0655950:intron 25.0%
! TATGATAAACATCATCAAGT+TGG - chr4_3:64956786-64956805 None:intergenic 25.0%
! ATCATAATAAAGGGATTAAG+TGG + chr4_3:64956800-64956819 Msa0655950:intron 25.0%
! AGTTCAGACTGATATTATAT+AGG - chr4_3:64956893-64956912 None:intergenic 25.0%
! ATATAATATCAGTCTGAACT+CGG + chr4_3:64956893-64956912 Msa0655950:intron 25.0%
! GAACACTATAAATTTCGTTT+AGG + chr4_3:64957113-64957132 Msa0655950:intron 25.0%
! ATGATTTCATACAATGAGAT+CGG - chr4_3:64957358-64957377 None:intergenic 25.0%
! CAAAGACTATTAAATTATGG+GGG - chr4_3:64958080-64958099 None:intergenic 25.0%
! CCAAAGACTATTAAATTATG+GGG - chr4_3:64958081-64958100 None:intergenic 25.0%
! GCAATTTAATGTCTTGATTA+TGG - chr4_3:64958191-64958210 None:intergenic 25.0%
!! TTGCTTAAGAAAGGAAATTT+TGG - chr4_3:64958470-64958489 None:intergenic 25.0%
! AAAATTTCCTTTCTTAAGCA+AGG + chr4_3:64958469-64958488 Msa0655950:intron 25.0%
!!! TATATTTCTCAATGGATTGA+AGG - chr4_3:64958582-64958601 None:intergenic 25.0%
!!! CTTTAAGGTATATTTCTCAA+TGG - chr4_3:64958590-64958609 None:intergenic 25.0%
! AAACATCAAAGAACTATTAC+TGG - chr4_3:64958847-64958866 None:intergenic 25.0%
! AGTAATAGTTCTTTGATGTT+TGG + chr4_3:64958846-64958865 Msa0655950:intron 25.0%
! TTAATTAAATAGAACGAGGA+TGG - chr4_3:64959063-64959082 None:intergenic 25.0%
!!! TTTTAAAGCACAAACCTTAA+TGG - chr4_3:64959180-64959199 None:intergenic 25.0%
! TTAGCAGTAATTTCTTCATT+TGG - chr4_3:64959217-64959236 None:intergenic 25.0%
! AAACCAAACCAAAACAATAT+TGG + chr4_3:64959401-64959420 Msa0655950:intron 25.0%
!!! GTCAGTTTTAAGTTTTTGAT+AGG - chr4_3:64959451-64959470 None:intergenic 25.0%
! ATAATCCTTCATAAGAAATG+TGG - chr4_3:64959811-64959830 None:intergenic 25.0%
!!! ATTTCATGTTTTTGAAAGGA+TGG - chr4_3:64959964-64959983 None:intergenic 25.0%
! TATAAGAAAAACCTACAACT+AGG - chr4_3:64960412-64960431 None:intergenic 25.0%
!! TCTTTTTAATGTCTTCTCTT+TGG - chr4_3:64960491-64960510 None:intergenic 25.0%
! TTTATGTCCAGAAATTAAAG+GGG - chr4_3:64960664-64960683 None:intergenic 25.0%
! GTTGTGATAATAGAAGAAAA+TGG + chr4_3:64960695-64960714 Msa0655950:three_prime_UTR 25.0%
! ATATGTTAGTGTTATGTTGT+TGG + chr4_3:64960869-64960888 Msa0655950:three_prime_UTR 25.0%
AAAAAGTTGAGGAAAAAGAG+AGG - chr4_3:64950628-64950647 None:intergenic 30.0%
! ATGGTATTGGAAAAAAGTTG+AGG - chr4_3:64950639-64950658 None:intergenic 30.0%
AAACCCAGAAAAAATGGTAT+TGG - chr4_3:64950652-64950671 None:intergenic 30.0%
!! TAACAAACCAATTAAGTTGG+GGG + chr4_3:64950737-64950756 Msa0655950:five_prime_UTR 30.0%
AAATTTGCGAAAGAAAGGAT+TGG + chr4_3:64950765-64950784 Msa0655950:five_prime_UTR 30.0%
AGTCTGTTAGTAACATTGAT+AGG + chr4_3:64950933-64950952 Msa0655950:five_prime_UTR 30.0%
TAGTAACATTGATAGGTTCT+TGG + chr4_3:64950940-64950959 Msa0655950:five_prime_UTR 30.0%
!!! GTTTTTGTTTTGATTGCACT+TGG + chr4_3:64951083-64951102 Msa0655950:intron 30.0%
ATGAATGTAAGTACATGTGT+CGG + chr4_3:64951278-64951297 Msa0655950:intron 30.0%
!!! CGTTTTTAATTTAAGAGCAC+CGG - chr4_3:64951365-64951384 None:intergenic 30.0%
TTAAAATCGTGGTGATAGAT+TGG + chr4_3:64951431-64951450 Msa0655950:intron 30.0%
! AGTTTGATTGTGGTGAATTT+TGG + chr4_3:64951605-64951624 Msa0655950:intron 30.0%
! AGTTTAGTTGTTGATAGATG+TGG + chr4_3:64951988-64952007 Msa0655950:intron 30.0%
!! TTTGTTGTTGTTGGTTGAAA+AGG + chr4_3:64952091-64952110 Msa0655950:intron 30.0%
! AGTAACGGAATGTATAAAAG+AGG - chr4_3:64952276-64952295 None:intergenic 30.0%
! CTTTTATACATTCCGTTACT+TGG + chr4_3:64952276-64952295 Msa0655950:intron 30.0%
! GATATTCTTCATTTTCCTTG+AGG + chr4_3:64952448-64952467 Msa0655950:intron 30.0%
GATATTGAAACCACAAGTTT+AGG + chr4_3:64952501-64952520 Msa0655950:intron 30.0%
! AAGTTTAGGATTTCACTCAT+AGG + chr4_3:64952515-64952534 Msa0655950:intron 30.0%
ACAACCAAGTTAAGGTTATA+AGG + chr4_3:64953073-64953092 Msa0655950:intron 30.0%
TTGTCATTAGGAACCAAATT+AGG + chr4_3:64953185-64953204 Msa0655950:intron 30.0%
TGTCATTAGGAACCAAATTA+GGG + chr4_3:64953186-64953205 Msa0655950:intron 30.0%
!! TCTATAGACTTGCTAAAAGT+AGG + chr4_3:64953219-64953238 Msa0655950:intron 30.0%
!! CTATAGACTTGCTAAAAGTA+GGG + chr4_3:64953220-64953239 Msa0655950:intron 30.0%
! AGCATCTCTTTTTACAACAT+TGG - chr4_3:64953269-64953288 None:intergenic 30.0%
ATATAAGAGAGGGTCAAAAA+GGG - chr4_3:64953435-64953454 None:intergenic 30.0%
GAAATTGGGAAATGGTAAAA+CGG - chr4_3:64953478-64953497 None:intergenic 30.0%
AACTTACTGAAATTGGGAAA+TGG - chr4_3:64953486-64953505 None:intergenic 30.0%
GTAAGGAAACTTACTGAAAT+TGG - chr4_3:64953493-64953512 None:intergenic 30.0%
GACAACAATAAATTGCATAG+CGG + chr4_3:64953590-64953609 Msa0655950:intron 30.0%
! TATACCACTTTAGTGGTTTT+GGG + chr4_3:64954015-64954034 Msa0655950:intron 30.0%
! CTAAGAGCATGTTAATTGAA+TGG + chr4_3:64954365-64954384 Msa0655950:intron 30.0%
TAGTCGTACTATGAATCTTT+AGG + chr4_3:64954467-64954486 Msa0655950:intron 30.0%
AACTCTTAAGAGAGATTTAG+AGG + chr4_3:64954558-64954577 Msa0655950:intron 30.0%
AAGAGAGATTTAGAGGTAAA+TGG + chr4_3:64954565-64954584 Msa0655950:intron 30.0%
!!! CCTGTTTTTTATTAACAGCT+TGG - chr4_3:64954746-64954765 None:intergenic 30.0%
CCAAGCTGTTAATAAAAAAC+AGG + chr4_3:64954743-64954762 Msa0655950:intron 30.0%
!!! TTTTTTATACACTCTTCCAG+CGG - chr4_3:64954985-64955004 None:intergenic 30.0%
! AAAAAAAAAGTGTGTGTGTG+AGG + chr4_3:64955000-64955019 Msa0655950:intron 30.0%
GATATCTACTACATATCTAC+TGG - chr4_3:64955164-64955183 None:intergenic 30.0%
GAAAATTGTATGGAATGAAG+AGG - chr4_3:64955207-64955226 None:intergenic 30.0%
AATTTAAGCGTTCTTGGTTA+GGG - chr4_3:64955231-64955250 None:intergenic 30.0%
AAATTTAAGCGTTCTTGGTT+AGG - chr4_3:64955232-64955251 None:intergenic 30.0%
CTCAATGTATTGGATATGAT+AGG + chr4_3:64955373-64955392 Msa0655950:intron 30.0%
TATAGGATTCAAATCACGAA+TGG - chr4_3:64955573-64955592 None:intergenic 30.0%
! TATGATTTTCCCATGTCATT+AGG + chr4_3:64955641-64955660 Msa0655950:intron 30.0%
ACTTATGTACCTAATGACAT+GGG - chr4_3:64955653-64955672 None:intergenic 30.0%
TACATAAGTGAAGATAGTGA+TGG + chr4_3:64955664-64955683 Msa0655950:five_prime_UTR 30.0%
AAACACAATACAGTACAAGA+AGG + chr4_3:64955829-64955848 Msa0655950:five_prime_UTR 30.0%
!!! AGAACTGCTTTTTCAGTATT+TGG + chr4_3:64955891-64955910 Msa0655950:five_prime_UTR 30.0%
!!! CTTTTTCAGTATTTGGAACA+AGG + chr4_3:64955898-64955917 Msa0655950:five_prime_UTR 30.0%
TATACAAAACGGGGAAAAAA+AGG - chr4_3:64956150-64956169 None:intergenic 30.0%
TTGCTATGTCTATACAAAAC+GGG - chr4_3:64956160-64956179 None:intergenic 30.0%
! CTTGCTATGTCTATACAAAA+CGG - chr4_3:64956161-64956180 None:intergenic 30.0%
ATGTGACATTCATTCAACTT+TGG - chr4_3:64956446-64956465 None:intergenic 30.0%
ATTCAATGGATACAAGTCAT+TGG - chr4_3:64956975-64956994 None:intergenic 30.0%
CGAACACATAAAGAAGAATA+TGG - chr4_3:64957076-64957095 None:intergenic 30.0%
GGATAACTGAATAACAGATT+TGG - chr4_3:64957239-64957258 None:intergenic 30.0%
TAAACTAACTCAAGTTAGCT+AGG - chr4_3:64957260-64957279 None:intergenic 30.0%
AAGAAAAAAAACTACAGAGC+GGG - chr4_3:64957424-64957443 None:intergenic 30.0%
GAAGAAAAAAAACTACAGAG+CGG - chr4_3:64957425-64957444 None:intergenic 30.0%
TCTTGGAAACAACAAATTGA+AGG + chr4_3:64957628-64957647 Msa0655950:intron 30.0%
CCCCATAATTTAATAGTCTT+TGG + chr4_3:64958078-64958097 Msa0655950:intron 30.0%
! TAGAAAGTTGGAGATTTTTG+AGG + chr4_3:64958110-64958129 Msa0655950:intron 30.0%
TAAGTCACAGTTCTATTAGA+GGG + chr4_3:64958410-64958429 Msa0655950:intron 30.0%
GAAGAACCAGAATATCTTTA+AGG - chr4_3:64958605-64958624 None:intergenic 30.0%
! TACAGGCTTTAATACATTGT+TGG + chr4_3:64958710-64958729 Msa0655950:intron 30.0%
! ACAGGCTTTAATACATTGTT+GGG + chr4_3:64958711-64958730 Msa0655950:intron 30.0%
! ATGCATTAAAGCTCTAACTT+GGG - chr4_3:64958745-64958764 None:intergenic 30.0%
! AATGCATTAAAGCTCTAACT+TGG - chr4_3:64958746-64958765 None:intergenic 30.0%
CAAAGAACTATTACTGGTAT+TGG - chr4_3:64958841-64958860 None:intergenic 30.0%
TCACAAATAACCAATCCTTT+AGG + chr4_3:64958972-64958991 Msa0655950:intron 30.0%
!! TTTTGATGTTGGTTAGGTTT+GGG - chr4_3:64959018-64959037 None:intergenic 30.0%
!! ATTTTGATGTTGGTTAGGTT+TGG - chr4_3:64959019-64959038 None:intergenic 30.0%
!!! CAGTTATTTTGATGTTGGTT+AGG - chr4_3:64959024-64959043 None:intergenic 30.0%
!!! CCATTCAGTTATTTTGATGT+TGG - chr4_3:64959029-64959048 None:intergenic 30.0%
CCAACATCAAAATAACTGAA+TGG + chr4_3:64959026-64959045 Msa0655950:intron 30.0%
ATTTAATTAAGTTTGGGCCT+TGG + chr4_3:64959073-64959092 Msa0655950:intron 30.0%
TTTAATTAAGTTTGGGCCTT+GGG + chr4_3:64959074-64959093 Msa0655950:intron 30.0%
!!! GTATCAATTTTGGTTCGAAT+TGG - chr4_3:64959329-64959348 None:intergenic 30.0%
ATTCGAACCAAAATTGATAC+TGG + chr4_3:64959329-64959348 Msa0655950:intron 30.0%
TTCGAACCAAAATTGATACT+GGG + chr4_3:64959330-64959349 Msa0655950:intron 30.0%
!!! GATCCAATATTGTTTTGGTT+TGG - chr4_3:64959407-64959426 None:intergenic 30.0%
TGTAACCACATTTCTTATGA+AGG + chr4_3:64959803-64959822 Msa0655950:intron 30.0%
! TAACACATCACTCAATTTTC+TGG + chr4_3:64959910-64959929 Msa0655950:intron 30.0%
AAAGTAGGGATGGAAATATT+TGG - chr4_3:64960095-64960114 None:intergenic 30.0%
AATGGCTGCCTATAAATTAA+AGG + chr4_3:64960118-64960137 Msa0655950:CDS 30.0%
ATGGCTGCCTATAAATTAAA+GGG + chr4_3:64960119-64960138 Msa0655950:CDS 30.0%
ATTTAAAGAACTGATGATCC+GGG - chr4_3:64960241-64960260 None:intergenic 30.0%
GATTTAAAGAACTGATGATC+CGG - chr4_3:64960242-64960261 None:intergenic 30.0%
CTTTAATAAAGTTTGCACCA+CGG - chr4_3:64960348-64960367 None:intergenic 30.0%
TGAACTGTAAATACTTGTAC+AGG - chr4_3:64960628-64960647 None:intergenic 30.0%
AAATACTAGATTTCACTGTG+TGG + chr4_3:64960721-64960740 Msa0655950:three_prime_UTR 30.0%
GTTTATTTCCTCTACTCAAA+TGG - chr4_3:64960965-64960984 None:intergenic 30.0%
!! ATCGGTAATGGATGATTGAA+AGG - chr4_3:64950553-64950572 None:intergenic 35.0%
TAGAAGAGATTGATCGGTAA+TGG - chr4_3:64950565-64950584 None:intergenic 35.0%
TGAACGAAACCCAGAAAAAA+TGG - chr4_3:64950658-64950677 None:intergenic 35.0%
! TTTTCTTCCCCCAACTTAAT+TGG - chr4_3:64950747-64950766 None:intergenic 35.0%
AAGAAAGGATTGGAAAATGC+TGG + chr4_3:64950775-64950794 Msa0655950:five_prime_UTR 35.0%
AGAAAGGATTGGAAAATGCT+GGG + chr4_3:64950776-64950795 Msa0655950:five_prime_UTR 35.0%
!! TGATGATCGGTTTTACATTC+CGG + chr4_3:64950820-64950839 Msa0655950:five_prime_UTR 35.0%
TGATTCTTTCTTGTCTTCAC+CGG - chr4_3:64950842-64950861 None:intergenic 35.0%
CTTGGATTCCACAAAGTTAT+TGG + chr4_3:64950958-64950977 Msa0655950:five_prime_UTR 35.0%
GATGGTACAAAGTTTGATTG+TGG + chr4_3:64951595-64951614 Msa0655950:intron 35.0%
! ACTTTGCTCTGAATGATCTA+TGG + chr4_3:64951727-64951746 Msa0655950:five_prime_UTR 35.0%
! CTTTGCTCTGAATGATCTAT+GGG + chr4_3:64951728-64951747 Msa0655950:five_prime_UTR 35.0%
TGATCTATGGGAATCGTTTA+AGG + chr4_3:64951740-64951759 Msa0655950:five_prime_UTR 35.0%
TCCCTTTACTACTTGATCAA+AGG + chr4_3:64951787-64951806 Msa0655950:five_prime_UTR 35.0%
CCCTTTGATCAAGTAGTAAA+GGG - chr4_3:64951791-64951810 None:intergenic 35.0%
CCCTTTACTACTTGATCAAA+GGG + chr4_3:64951788-64951807 Msa0655950:five_prime_UTR 35.0%
TCCCTTTGATCAAGTAGTAA+AGG - chr4_3:64951792-64951811 None:intergenic 35.0%
ACAAATACGGAACATAGTAC+TGG - chr4_3:64951824-64951843 None:intergenic 35.0%
GTACTATGTTCCGTATTTGT+CGG + chr4_3:64951824-64951843 Msa0655950:five_prime_UTR 35.0%
CACATGAAATGTCAATACCT+TGG - chr4_3:64951894-64951913 None:intergenic 35.0%
! TTTAAGACAACACTAACTGC+TGG + chr4_3:64951964-64951983 Msa0655950:intron 35.0%
! ATTTTCTCTCCCTGTGATTT+TGG + chr4_3:64952353-64952372 Msa0655950:intron 35.0%
TGAGTGAAATCCTAAACTTG+TGG - chr4_3:64952514-64952533 None:intergenic 35.0%
TCTTCCGAATTTCAGCAAAA+TGG - chr4_3:64952652-64952671 None:intergenic 35.0%
! ACTGCTCAACATAGTGTTTT+GGG + chr4_3:64952795-64952814 Msa0655950:intron 35.0%
!! TCAACATAGTGTTTTGGGTA+TGG + chr4_3:64952800-64952819 Msa0655950:intron 35.0%
ACACTCCGAGTATAAAATGA+TGG + chr4_3:64952862-64952881 Msa0655950:intron 35.0%
GACAACATACAACCAAGTTA+AGG + chr4_3:64953065-64953084 Msa0655950:intron 35.0%
GTCATTAGGAACCAAATTAG+GGG + chr4_3:64953187-64953206 Msa0655950:intron 35.0%
ACCATTTAACAGCCACTAAA+GGG - chr4_3:64953398-64953417 None:intergenic 35.0%
AACCATTTAACAGCCACTAA+AGG - chr4_3:64953399-64953418 None:intergenic 35.0%
GATATAAGAGAGGGTCAAAA+AGG - chr4_3:64953436-64953455 None:intergenic 35.0%
CGGCCCTAAAAACATTTAAT+TGG - chr4_3:64953458-64953477 None:intergenic 35.0%
ATTGAGTGAGAAGAGATGTA+AGG - chr4_3:64953510-64953529 None:intergenic 35.0%
CTAGAAACAACAACGAGAAA+GGG - chr4_3:64953684-64953703 None:intergenic 35.0%
TACGCAAACGTCAAAAAACA+GGG - chr4_3:64953715-64953734 None:intergenic 35.0%
ATACGCAAACGTCAAAAAAC+AGG - chr4_3:64953716-64953735 None:intergenic 35.0%
TATCCACTATACCACTTTAG+TGG + chr4_3:64954008-64954027 Msa0655950:intron 35.0%
AAACCACTAAAGTGGTATAG+TGG - chr4_3:64954014-64954033 None:intergenic 35.0%
! CTATACCACTTTAGTGGTTT+TGG + chr4_3:64954014-64954033 Msa0655950:intron 35.0%
!! ATACCACTTTAGTGGTTTTG+GGG + chr4_3:64954016-64954035 Msa0655950:intron 35.0%
CATGAATATGAGATGCATTC+AGG + chr4_3:64954074-64954093 Msa0655950:intron 35.0%
AGGATGATGCCGAAAATTAT+TGG + chr4_3:64954094-64954113 Msa0655950:intron 35.0%
! GTTCAGCGACCAATAATTTT+CGG - chr4_3:64954106-64954125 None:intergenic 35.0%
AGAGCATGTTAATTGAATGG+TGG + chr4_3:64954368-64954387 Msa0655950:intron 35.0%
! TCTTTAGGAGAGAGTAATTG+AGG + chr4_3:64954482-64954501 Msa0655950:intron 35.0%
! CTTTAGGAGAGAGTAATTGA+GGG + chr4_3:64954483-64954502 Msa0655950:intron 35.0%
TTTAGGAGAGAGTAATTGAG+GGG + chr4_3:64954484-64954503 Msa0655950:intron 35.0%
TGTAACCTTAATACACACAC+AGG + chr4_3:64954594-64954613 Msa0655950:intron 35.0%
GTAACCTTAATACACACACA+GGG + chr4_3:64954595-64954614 Msa0655950:intron 35.0%
!!! AAAAACAGGTTTTGTTGCAG+TGG + chr4_3:64954757-64954776 Msa0655950:intron 35.0%
!! TTCTTCAGCAGCAGTTTTAT+TGG + chr4_3:64954787-64954806 Msa0655950:intron 35.0%
!!! TCTTCAGCAGCAGTTTTATT+GGG + chr4_3:64954788-64954807 Msa0655950:intron 35.0%
TGGTTAGGGTGAAAATTGTA+TGG - chr4_3:64955217-64955236 None:intergenic 35.0%
TGACTACATACAAGAATCAG+TGG - chr4_3:64955446-64955465 None:intergenic 35.0%
TATAACTTCTGATCAGCGTT+AGG + chr4_3:64955540-64955559 Msa0655950:intron 35.0%
TTGAATCCTATAGATGCACT+TGG + chr4_3:64955581-64955600 Msa0655950:intron 35.0%
GGTAGCTATTAGTTATGCAT+TGG + chr4_3:64955602-64955621 Msa0655950:intron 35.0%
ATGGGAAAATCATATCTGGT+TGG - chr4_3:64955635-64955654 None:intergenic 35.0%
TGACATGGGAAAATCATATC+TGG - chr4_3:64955639-64955658 None:intergenic 35.0%
CACTTATGTACCTAATGACA+TGG - chr4_3:64955654-64955673 None:intergenic 35.0%
TACAGAGATTCATGTAGTGA+AGG + chr4_3:64955694-64955713 Msa0655950:five_prime_UTR 35.0%
GTGATTGCGAATATGGAAAA+AGG + chr4_3:64955722-64955741 Msa0655950:five_prime_UTR 35.0%
TTGCGAATATGGAAAAAGGA+CGG + chr4_3:64955726-64955745 Msa0655950:five_prime_UTR 35.0%
TACTGAAAAAGCAGTTCTTG+AGG - chr4_3:64955889-64955908 None:intergenic 35.0%
!! CAATATAAGATGGACTGTTC+AGG - chr4_3:64956002-64956021 None:intergenic 35.0%
ACAACTTCTCAATGACATGA+GGG - chr4_3:64956069-64956088 None:intergenic 35.0%
GTGATTTATTGCCAAACAGT+TGG + chr4_3:64956087-64956106 Msa0655950:five_prime_UTR 35.0%
TGCTATGTCTATACAAAACG+GGG - chr4_3:64956159-64956178 None:intergenic 35.0%
TAAAGTTGTTGTCATGTGAC+TGG + chr4_3:64956516-64956535 Msa0655950:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG - chr4_3:64956571-64956590 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + chr4_3:64956571-64956590 Msa0655950:intron 35.0%
!! TTTGATTTGCCCATGCTTAA+GGG - chr4_3:64956738-64956757 None:intergenic 35.0%
!!! TTTTGATTTGCCCATGCTTA+AGG - chr4_3:64956739-64956758 None:intergenic 35.0%
AATTAAAGCGAAGATGCTTG+TGG + chr4_3:64956837-64956856 Msa0655950:intron 35.0%
TTAGCAAACAAAATATGGGC+TGG + chr4_3:64957160-64957179 Msa0655950:intron 35.0%
TAGCAAACAAAATATGGGCT+GGG + chr4_3:64957161-64957180 Msa0655950:intron 35.0%
GAATATGTCATTCAGTTCCA+GGG - chr4_3:64957217-64957236 None:intergenic 35.0%
! GTTACAAGGTCTAAGAGTAT+CGG + chr4_3:64957318-64957337 Msa0655950:intron 35.0%
AGAAAAAAAACTACAGAGCG+GGG - chr4_3:64957423-64957442 None:intergenic 35.0%
! TTTTTCCCTCCTTTCTATCA+TGG + chr4_3:64957448-64957467 Msa0655950:intron 35.0%
TCTATGATGCCATGATAGAA+AGG - chr4_3:64957460-64957479 None:intergenic 35.0%
! TGAGTTGTATCCTTGATAAC+AGG - chr4_3:64957499-64957518 None:intergenic 35.0%
! CAAAATCAAACTGATTCCTC+TGG + chr4_3:64957517-64957536 Msa0655950:intron 35.0%
ATGAGAACAATTTCCTCTCT+TGG + chr4_3:64957611-64957630 Msa0655950:intron 35.0%
!! CAATTTGTTGTTTCCAAGAG+AGG - chr4_3:64957627-64957646 None:intergenic 35.0%
!! TAGAGGAGCATTTGGATTAA+CGG - chr4_3:64957684-64957703 None:intergenic 35.0%
!! AGTTCAAAGAGGTATCTTAG+AGG - chr4_3:64957701-64957720 None:intergenic 35.0%
! GATTGCAATCTAGTTCAAAG+AGG - chr4_3:64957712-64957731 None:intergenic 35.0%
CTTTGAACTAGATTGCAATC+AGG + chr4_3:64957712-64957731 Msa0655950:intron 35.0%
AAGAAGTCACGTAAAGAACA+AGG - chr4_3:64957780-64957799 None:intergenic 35.0%
! AAGAAACGAGTCTTATAGAG+TGG - chr4_3:64957804-64957823 None:intergenic 35.0%
TTAGTTGAATCCATCACCAA+GGG + chr4_3:64957918-64957937 Msa0655950:intron 35.0%
!! CACAAGCTAATCATTTTGGT+GGG - chr4_3:64958046-64958065 None:intergenic 35.0%
! ACACAAGCTAATCATTTTGG+TGG - chr4_3:64958047-64958066 None:intergenic 35.0%
TAAATTATGGGGGATACTGA+GGG - chr4_3:64958070-64958089 None:intergenic 35.0%
TTAAATTATGGGGGATACTG+AGG - chr4_3:64958071-64958090 None:intergenic 35.0%
TGGATGTGAATCTAGAAAGT+TGG + chr4_3:64958098-64958117 Msa0655950:intron 35.0%
! TGTGATGAAAGATTTGGTCT+AGG - chr4_3:64958232-64958251 None:intergenic 35.0%
GACCAAATCTTTCATCACAA+TGG + chr4_3:64958233-64958252 Msa0655950:intron 35.0%
CTCCATTGTGATGAAAGATT+TGG - chr4_3:64958238-64958257 None:intergenic 35.0%
CAAATCTTTCATCACAATGG+AGG + chr4_3:64958236-64958255 Msa0655950:intron 35.0%
!! AAAGGCACAAGTACTTTTAG+AGG - chr4_3:64958322-64958341 None:intergenic 35.0%
CTCTAATAGAACTGTGACTT+AGG - chr4_3:64958411-64958430 None:intergenic 35.0%
CTAAGTCACAGTTCTATTAG+AGG + chr4_3:64958409-64958428 Msa0655950:intron 35.0%
TATTAGAGGGAAAATGCCTT+GGG + chr4_3:64958423-64958442 Msa0655950:intron 35.0%
AAGAATGCCTTGCTTAAGAA+AGG - chr4_3:64958479-64958498 None:intergenic 35.0%
CACGAGCAATTCATATTGTA+CGG - chr4_3:64958644-64958663 None:intergenic 35.0%
TTGCTCGTGATATTCTTCAA+CGG + chr4_3:64958655-64958674 Msa0655950:intron 35.0%
! TATTACTGGTATTGGAGCAT+CGG - chr4_3:64958833-64958852 None:intergenic 35.0%
CTCTCTAATTCCTAAAGGAT+TGG - chr4_3:64958985-64959004 None:intergenic 35.0%
TTTCATGAACAGCAGACAAA+CGG + chr4_3:64959238-64959257 Msa0655950:intron 35.0%
!! GTTGTGACATCTTCTAGTTT+GGG - chr4_3:64959304-64959323 None:intergenic 35.0%
! AGTTGTGACATCTTCTAGTT+TGG - chr4_3:64959305-64959324 None:intergenic 35.0%
!! GTGCTGATCCAATATTGTTT+TGG - chr4_3:64959412-64959431 None:intergenic 35.0%
CAAAAACTTAAAACTGACGG+TGG + chr4_3:64959453-64959472 Msa0655950:intron 35.0%
CTCAATTTATCATTCCGATC+TGG - chr4_3:64959500-64959519 None:intergenic 35.0%
CAGATCGGAATGATAAATTG+AGG + chr4_3:64959498-64959517 Msa0655950:intron 35.0%
AGAATTTCCAAGTGTCTCTT+TGG - chr4_3:64959562-64959581 None:intergenic 35.0%
AGGAAAATGTAGTGAAGTCT+TGG - chr4_3:64959615-64959634 None:intergenic 35.0%
! TCTGCATAATTTGTCAGCAA+TGG + chr4_3:64959714-64959733 Msa0655950:intron 35.0%
!!! GATTTATTTTGTTCCGTTGC+AGG + chr4_3:64960014-64960033 Msa0655950:intron 35.0%
! TAAATGGTTAAGGCTAGTTC+AGG + chr4_3:64960208-64960227 Msa0655950:CDS 35.0%
CATCAGTTCTTTAAATCGCA+TGG + chr4_3:64960245-64960264 Msa0655950:CDS 35.0%
TTTAACCGAGGGAATATAAC+TGG - chr4_3:64960305-64960324 None:intergenic 35.0%
!!! TAAGGCTTAGTTTTAACCGA+GGG - chr4_3:64960316-64960335 None:intergenic 35.0%
!!! TTAAGGCTTAGTTTTAACCG+AGG - chr4_3:64960317-64960336 None:intergenic 35.0%
!!! TTTCATCTTTTGTGCTGCTT+AGG - chr4_3:64960437-64960456 None:intergenic 35.0%
ACAGATTAACAGAGTATGTG+TGG + chr4_3:64960591-64960610 Msa0655950:three_prime_UTR 35.0%
CAGATTAACAGAGTATGTGT+GGG + chr4_3:64960592-64960611 Msa0655950:three_prime_UTR 35.0%
CTGTAAATACTTGTACAGGT+TGG - chr4_3:64960624-64960643 None:intergenic 35.0%
TGAACATATTGTTGCTCTGA+TGG + chr4_3:64960770-64960789 Msa0655950:three_prime_UTR 35.0%
TTCCTCTACTCAAATGGTTA+TGG - chr4_3:64960959-64960978 None:intergenic 35.0%
GGAAAAAGAGAGGATCAAGA+AGG - chr4_3:64950618-64950637 None:intergenic 40.0%
!! TGCAATTTGGTGGTGATGAT+CGG + chr4_3:64950807-64950826 Msa0655950:five_prime_UTR 40.0%
GAGAGACAAGAATGTTGAAG+AGG + chr4_3:64950883-64950902 Msa0655950:five_prime_UTR 40.0%
AGCTGGAACCAATAACTTTG+TGG - chr4_3:64950969-64950988 None:intergenic 40.0%
GTGTAACTACGGACAAGTTT+AGG + chr4_3:64951122-64951141 Msa0655950:intron 40.0%
CGTGGTGATAGATTGGAAAA+AGG + chr4_3:64951438-64951457 Msa0655950:intron 40.0%
TATGGGAATCGTTTAAGGAG+TGG + chr4_3:64951745-64951764 Msa0655950:five_prime_UTR 40.0%
! TTTAAGGAGTGGAGTGCTTA+TGG + chr4_3:64951756-64951775 Msa0655950:five_prime_UTR 40.0%
AGCTGAATAGCCGACAAATA+CGG - chr4_3:64951837-64951856 None:intergenic 40.0%
! TTGTCGGCTATTCAGCTATA+TGG + chr4_3:64951840-64951859 Msa0655950:five_prime_UTR 40.0%
GAAATGTCAATACCTTGGCT+TGG - chr4_3:64951889-64951908 None:intergenic 40.0%
ATTTCGCTGCCAAAATCACA+GGG - chr4_3:64952365-64952384 None:intergenic 40.0%
AATTTCGCTGCCAAAATCAC+AGG - chr4_3:64952366-64952385 None:intergenic 40.0%
GATGCTATATTGAACCCTCA+AGG - chr4_3:64952466-64952485 None:intergenic 40.0%
TAGTAGAAAGTCATGCCATG+AGG + chr4_3:64952770-64952789 Msa0655950:intron 40.0%
CAAAACACTATGTTGAGCAG+TGG - chr4_3:64952796-64952815 None:intergenic 40.0%
! CACTGCTCAACATAGTGTTT+TGG + chr4_3:64952794-64952813 Msa0655950:intron 40.0%
GTGAAAAGCAAAGGCTCTTT+GGG + chr4_3:64952895-64952914 Msa0655950:intron 40.0%
! GCTCTTTGGGAGAAAATTTC+CGG + chr4_3:64952908-64952927 Msa0655950:intron 40.0%
TTTGGGAGAAAATTTCCGGA+GGG + chr4_3:64952912-64952931 Msa0655950:intron 40.0%
AAAGGCAGTCAAAGAAACAC+TGG + chr4_3:64952993-64953012 Msa0655950:intron 40.0%
AAGGCAGTCAAAGAAACACT+GGG + chr4_3:64952994-64953013 Msa0655950:intron 40.0%
AAGAAACACTGGGAAAATCG+AGG + chr4_3:64953004-64953023 Msa0655950:intron 40.0%
AGAAACACTGGGAAAATCGA+GGG + chr4_3:64953005-64953024 Msa0655950:intron 40.0%
CATGACACTTGTGTAGAATG+AGG + chr4_3:64953104-64953123 Msa0655950:intron 40.0%
GATACCTTGTTCCCCTAATT+TGG - chr4_3:64953201-64953220 None:intergenic 40.0%
AAAGAGATGCTATAGCAGAG+TGG + chr4_3:64953278-64953297 Msa0655950:intron 40.0%
AAGAGATGCTATAGCAGAGT+GGG + chr4_3:64953279-64953298 Msa0655950:intron 40.0%
CCTAGAAACAACAACGAGAA+AGG - chr4_3:64953685-64953704 None:intergenic 40.0%
!! CCTTTCTCGTTGTTGTTTCT+AGG + chr4_3:64953682-64953701 Msa0655950:intron 40.0%
ACGCAAACGTCAAAAAACAG+GGG - chr4_3:64953714-64953733 None:intergenic 40.0%
TGCGTATATGCAAATTGCGA+AGG + chr4_3:64953729-64953748 Msa0655950:intron 40.0%
ATCAGAACGCCTATTGTGAA+GGG - chr4_3:64953765-64953784 None:intergenic 40.0%
TATCAGAACGCCTATTGTGA+AGG - chr4_3:64953766-64953785 None:intergenic 40.0%
TTCACAATAGGCGTTCTGAT+AGG + chr4_3:64953765-64953784 Msa0655950:intron 40.0%
TCACAATAGGCGTTCTGATA+GGG + chr4_3:64953766-64953785 Msa0655950:intron 40.0%
!!! ACTTTAGTGGTTTTGGGGTT+GGG + chr4_3:64954021-64954040 Msa0655950:intron 40.0%
AAGGCAACAAGTATTCCTTG+AGG + chr4_3:64954172-64954191 Msa0655950:intron 40.0%
! CTTTCTAGTGCTTAGTCTGT+TGG - chr4_3:64954199-64954218 None:intergenic 40.0%
CAACAGACTAAGCACTAGAA+AGG + chr4_3:64954197-64954216 Msa0655950:intron 40.0%
TATCGAAGAATCCAAGCATG+AGG + chr4_3:64954240-64954259 Msa0655950:intron 40.0%
AGAATCCAAGCATGAGGTAT+AGG + chr4_3:64954246-64954265 Msa0655950:intron 40.0%
ACTAGATGATATACCCCTTG+AGG + chr4_3:64954276-64954295 Msa0655950:intron 40.0%
ATATACCCCTTGAGGTATGA+TGG + chr4_3:64954284-64954303 Msa0655950:intron 40.0%
TATACCCCTTGAGGTATGAT+GGG + chr4_3:64954285-64954304 Msa0655950:intron 40.0%
AACACCCTGTGTGTGTATTA+AGG - chr4_3:64954602-64954621 None:intergenic 40.0%
TTGTATGGAATGAAGAGGGA+AGG - chr4_3:64955202-64955221 None:intergenic 40.0%
TACTTCAGCTGAAATCTCGA+TGG - chr4_3:64955297-64955316 None:intergenic 40.0%
ATTCTCTCTCCCCTTCTTTA+TGG + chr4_3:64955420-64955439 Msa0655950:intron 40.0%
AATCAGTGGCCATAAAGAAG+GGG - chr4_3:64955432-64955451 None:intergenic 40.0%
GAATCAGTGGCCATAAAGAA+GGG - chr4_3:64955433-64955452 None:intergenic 40.0%
AGAATCAGTGGCCATAAAGA+AGG - chr4_3:64955434-64955453 None:intergenic 40.0%
TAGCTACCAAGTGCATCTAT+AGG - chr4_3:64955590-64955609 None:intergenic 40.0%
AGTAGTGATGACAGTGAAAC+TGG + chr4_3:64955859-64955878 Msa0655950:five_prime_UTR 40.0%
GTAGTGATGACAGTGAAACT+GGG + chr4_3:64955860-64955879 Msa0655950:five_prime_UTR 40.0%
TTGGAACAAGGTCATCCTTA+TGG + chr4_3:64955910-64955929 Msa0655950:five_prime_UTR 40.0%
!! AGATGGACTGTTCAGGTTAA+GGG - chr4_3:64955995-64956014 None:intergenic 40.0%
!! AAGATGGACTGTTCAGGTTA+AGG - chr4_3:64955996-64956015 None:intergenic 40.0%
CACAACTTCTCAATGACATG+AGG - chr4_3:64956070-64956089 None:intergenic 40.0%
CCTGTGGGTATTCGATATAT+AGG - chr4_3:64956255-64956274 None:intergenic 40.0%
CCTATATATCGAATACCCAC+AGG + chr4_3:64956252-64956271 Msa0655950:CDS 40.0%
!!! TCTTTTAAAGTAGGGCCTGT+GGG - chr4_3:64956270-64956289 None:intergenic 40.0%
!!! ATCTTTTAAAGTAGGGCCTG+TGG - chr4_3:64956271-64956290 None:intergenic 40.0%
! AATTACCTGTCAAGGGTGTA+TGG - chr4_3:64956326-64956345 None:intergenic 40.0%
! CAACTTTGGAGAAGAAAAGC+AGG - chr4_3:64956432-64956451 None:intergenic 40.0%
TTAATTAACCTTGGCGCAAC+TGG + chr4_3:64956493-64956512 Msa0655950:intron 40.0%
GGCCTCTTGTGTAAAAAACA+GGG + chr4_3:64956566-64956585 Msa0655950:intron 40.0%
AAGCAATAAAAAGGGCAACC+CGG - chr4_3:64956663-64956682 None:intergenic 40.0%
TCGATTTAGTCCCTTAAGCA+TGG + chr4_3:64956725-64956744 Msa0655950:intron 40.0%
CGATTTAGTCCCTTAAGCAT+GGG + chr4_3:64956726-64956745 Msa0655950:intron 40.0%
!! TCAAGTTGGTCCCTTATTGT+TGG - chr4_3:64956772-64956791 None:intergenic 40.0%
!!! AGATGCTTGTGGTTTTGGAT+AGG + chr4_3:64956848-64956867 Msa0655950:intron 40.0%
!!! GATGCTTGTGGTTTTGGATA+GGG + chr4_3:64956849-64956868 Msa0655950:intron 40.0%
!!! ATGCTTGTGGTTTTGGATAG+GGG + chr4_3:64956850-64956869 Msa0655950:intron 40.0%
!! ACAAAATATGGGCTGGGTAA+AGG + chr4_3:64957167-64957186 Msa0655950:intron 40.0%
!! CAAAATATGGGCTGGGTAAA+GGG + chr4_3:64957168-64957187 Msa0655950:intron 40.0%
GGAATATGTCATTCAGTTCC+AGG - chr4_3:64957218-64957237 None:intergenic 40.0%
AAAAAAAACTACAGAGCGGG+GGG - chr4_3:64957421-64957440 None:intergenic 40.0%
GAAAAAAAACTACAGAGCGG+GGG - chr4_3:64957422-64957441 None:intergenic 40.0%
TGATGCCATGATAGAAAGGA+GGG - chr4_3:64957456-64957475 None:intergenic 40.0%
ATGATGCCATGATAGAAAGG+AGG - chr4_3:64957457-64957476 None:intergenic 40.0%
! TGTATCCTTGATAACAGGTG+TGG - chr4_3:64957494-64957513 None:intergenic 40.0%
TGATGTGAGATTCAATCCAG+AGG - chr4_3:64957536-64957555 None:intergenic 40.0%
!! AGAGGAGCATTTGGATTAAC+GGG - chr4_3:64957683-64957702 None:intergenic 40.0%
!! AGGTATCTTAGAGGAGCATT+TGG - chr4_3:64957692-64957711 None:intergenic 40.0%
AAAATCCAGCTTATACGACC+TGG + chr4_3:64957741-64957760 Msa0655950:intron 40.0%
AAATCCAGCTTATACGACCT+GGG + chr4_3:64957742-64957761 Msa0655950:intron 40.0%
CTTAGTTGAATCCATCACCA+AGG + chr4_3:64957917-64957936 Msa0655950:intron 40.0%
AGGATCAAATTGATCGCGAT+GGG - chr4_3:64958021-64958040 None:intergenic 40.0%
TAGGATCAAATTGATCGCGA+TGG - chr4_3:64958022-64958041 None:intergenic 40.0%
!! GCTAATCATTTTGGTGGGAT+AGG - chr4_3:64958041-64958060 None:intergenic 40.0%
! GGGACACAAGCTAATCATTT+TGG - chr4_3:64958050-64958069 None:intergenic 40.0%
AGGTCTACAGTTTCGTACTT+CGG + chr4_3:64958130-64958149 Msa0655950:intron 40.0%
TACAGTTTCGTACTTCGGAA+TGG + chr4_3:64958135-64958154 Msa0655950:intron 40.0%
ACAGTTTCGTACTTCGGAAT+GGG + chr4_3:64958136-64958155 Msa0655950:intron 40.0%
ATTGCTTATTTGCAGACACG+TGG + chr4_3:64958206-64958225 Msa0655950:intron 40.0%
AACTGTGACTTAGGAACGAA+GGG - chr4_3:64958402-64958421 None:intergenic 40.0%
CTATTAGAGGGAAAATGCCT+TGG + chr4_3:64958422-64958441 Msa0655950:intron 40.0%
GGAAAATGCCTTGGGAAATT+CGG + chr4_3:64958431-64958450 Msa0655950:intron 40.0%
!! GGAAATTTTGGCAGTACTGA+AGG - chr4_3:64958458-64958477 None:intergenic 40.0%
TGCGCAAAATCCATCATTTC+AGG + chr4_3:64958512-64958531 Msa0655950:intron 40.0%
CACTTTCTTGCCTGAAATGA+TGG - chr4_3:64958525-64958544 None:intergenic 40.0%
CATCATTTCAGGCAAGAAAG+TGG + chr4_3:64958523-64958542 Msa0655950:intron 40.0%
!! TCTCAATGGATTGAAGGATG+TGG - chr4_3:64958576-64958595 None:intergenic 40.0%
GAGCAATTCATATTGTACGG+AGG - chr4_3:64958641-64958660 None:intergenic 40.0%
! GATCCAGTTTGTTTGAGACT+TGG + chr4_3:64958677-64958696 Msa0655950:intron 40.0%
TTGCCAAGTCTCAAACAAAC+TGG - chr4_3:64958683-64958702 None:intergenic 40.0%
GACTTGGCAACAATTCTTAC+AGG + chr4_3:64958693-64958712 Msa0655950:intron 40.0%
CTAGGCTCTCTAATTCCTAA+AGG - chr4_3:64958990-64959009 None:intergenic 40.0%
CTATCAAGAACGTGTTTGTG+AGG - chr4_3:64959113-64959132 None:intergenic 40.0%
CTCACAAACACGTTCTTGAT+AGG + chr4_3:64959111-64959130 Msa0655950:intron 40.0%
ACAAACACGTTCTTGATAGG+AGG + chr4_3:64959114-64959133 Msa0655950:intron 40.0%
ATAAACCACCAACGAATGCT+AGG + chr4_3:64959146-64959165 Msa0655950:intron 40.0%
TTGATTGTCCTAGCATTCGT+TGG - chr4_3:64959157-64959176 None:intergenic 40.0%
GCTAGGACAATCAACCATTA+AGG + chr4_3:64959163-64959182 Msa0655950:intron 40.0%
GTTTCAGATGTTGTAAGCAC+TGG - chr4_3:64959282-64959301 None:intergenic 40.0%
! CATTGGCCCAGTATCAATTT+TGG - chr4_3:64959339-64959358 None:intergenic 40.0%
! AGATGTCACACCTTCTAGTT+GGG - chr4_3:64959379-64959398 None:intergenic 40.0%
AAGATGTCACACCTTCTAGT+TGG - chr4_3:64959380-64959399 None:intergenic 40.0%
TATTGGATCAGCACTAACTG+CGG + chr4_3:64959418-64959437 Msa0655950:intron 40.0%
CGGAATGATAAATTGAGGTC+TGG + chr4_3:64959503-64959522 Msa0655950:intron 40.0%
!! TCTTTGGTGCTGATGTTGTT+TGG - chr4_3:64959546-64959565 None:intergenic 40.0%
! TTGTTAGAAGCATGACACTC+TGG + chr4_3:64959831-64959850 Msa0655950:intron 40.0%
! TGTTAGAAGCATGACACTCT+GGG + chr4_3:64959832-64959851 Msa0655950:intron 40.0%
!! TTCCATCCCTACTTTTGCAA+TGG + chr4_3:64960100-64960119 Msa0655950:CDS 40.0%
AGGCTGCAGATAAATGGTTA+AGG + chr4_3:64960198-64960217 Msa0655950:CDS 40.0%
AAGCCTTAATTTCATTGCCG+TGG + chr4_3:64960328-64960347 Msa0655950:three_prime_UTR 40.0%
TCACAATCTCTACAGATGGA+TGG - chr4_3:64960372-64960391 None:intergenic 40.0%
TCCATCTGTAGAGATTGTGA+TGG + chr4_3:64960372-64960391 Msa0655950:three_prime_UTR 40.0%
! GTTTTTCCCCCTTTTCAGAA+GGG - chr4_3:64960541-64960560 None:intergenic 40.0%
! AGTTTTTCCCCCTTTTCAGA+AGG - chr4_3:64960542-64960561 None:intergenic 40.0%
!! GGCACAATTTTGGTACTATC+TGG + chr4_3:64960747-64960766 Msa0655950:three_prime_UTR 40.0%
CATATTGTTGCTCTGATGGT+AGG + chr4_3:64960774-64960793 Msa0655950:three_prime_UTR 40.0%
AGCCATAACCATTTGAGTAG+AGG + chr4_3:64960954-64960973 Msa0655950:three_prime_UTR 40.0%
CAAGAAGGAGAAACAGGAAG+TGG - chr4_3:64950603-64950622 None:intergenic 45.0%
GAGGATCAAGAAGGAGAAAC+AGG - chr4_3:64950609-64950628 None:intergenic 45.0%
TCCAGCTCAGTATTTCTCCA+AGG + chr4_3:64950982-64951001 Msa0655950:five_prime_UTR 45.0%
ACCTTGGAGAAATACTGAGC+TGG - chr4_3:64950986-64951005 None:intergenic 45.0%
CAAAGCACAAACACAGACAC+CGG + chr4_3:64951205-64951224 Msa0655950:intron 45.0%
! ACGTCTTCAATCAGAAGTGC+CGG + chr4_3:64951343-64951362 Msa0655950:intron 45.0%
TGTCTGTAGACGACAATGAG+AGG + chr4_3:64951672-64951691 Msa0655950:intron 45.0%
TGTAGACGACAATGAGAGGT+TGG + chr4_3:64951676-64951695 Msa0655950:intron 45.0%
! TTGGCACTCGACTTTTCTGT+AGG - chr4_3:64951870-64951889 None:intergenic 45.0%
GGTGAAAAGCAAAGGCTCTT+TGG + chr4_3:64952894-64952913 Msa0655950:intron 45.0%
! CTTTGGGAGAAAATTTCCGG+AGG + chr4_3:64952911-64952930 Msa0655950:intron 45.0%
CTTAGATCTCTCAAACCCTC+CGG - chr4_3:64952930-64952949 None:intergenic 45.0%
! TGAGAGATCTAAGGAAGTGC+TGG + chr4_3:64952937-64952956 Msa0655950:intron 45.0%
GAAACACTGGGAAAATCGAG+GGG + chr4_3:64953006-64953025 Msa0655950:intron 45.0%
CACCTAAGAGTGAGGATTCT+TGG + chr4_3:64953033-64953052 Msa0655950:intron 45.0%
AGCCAAGAATCCTCACTCTT+AGG - chr4_3:64953038-64953057 None:intergenic 45.0%
GGAACCAAATTAGGGGAACA+AGG + chr4_3:64953194-64953213 Msa0655950:intron 45.0%
ATGCTATAGCAGAGTGGGAA+TGG + chr4_3:64953284-64953303 Msa0655950:intron 45.0%
!! AGGGCTATTTTGCCACTATC+TGG - chr4_3:64953379-64953398 None:intergenic 45.0%
GTGGCAAAATAGCCCTTTAG+TGG + chr4_3:64953383-64953402 Msa0655950:intron 45.0%
GCCCTTTAGTGGCTGTTAAA+TGG + chr4_3:64953394-64953413 Msa0655950:intron 45.0%
GAAACAACAACGAGAAAGGG+TGG - chr4_3:64953681-64953700 None:intergenic 45.0%
TCAGAACGCCTATTGTGAAG+GGG - chr4_3:64953764-64953783 None:intergenic 45.0%
CACAATAGGCGTTCTGATAG+GGG + chr4_3:64953767-64953786 Msa0655950:intron 45.0%
ATAGCCAGGTGACTGCTATT+GGG - chr4_3:64953991-64954010 None:intergenic 45.0%
!! AAGTGGTATAGTGGATAGCC+AGG - chr4_3:64954005-64954024 None:intergenic 45.0%
CAACCCCAAAACCACTAAAG+TGG - chr4_3:64954022-64954041 None:intergenic 45.0%
!!! CACTTTAGTGGTTTTGGGGT+TGG + chr4_3:64954020-64954039 Msa0655950:intron 45.0%
CAGACTAAGCACTAGAAAGG+AGG + chr4_3:64954200-64954219 Msa0655950:intron 45.0%
ATCCAAGCATGAGGTATAGG+TGG + chr4_3:64954249-64954268 Msa0655950:intron 45.0%
AACCACCTATACCTCATGCT+TGG - chr4_3:64954254-64954273 None:intergenic 45.0%
AAGCATGAGGTATAGGTGGT+TGG + chr4_3:64954253-64954272 Msa0655950:intron 45.0%
ATACCCCTTGAGGTATGATG+GGG + chr4_3:64954286-64954305 Msa0655950:intron 45.0%
TATCCCCATCATACCTCAAG+GGG - chr4_3:64954292-64954311 None:intergenic 45.0%
CTATCCCCATCATACCTCAA+GGG - chr4_3:64954293-64954312 None:intergenic 45.0%
GTAGTTAACCTCACCTTGCT+TGG + chr4_3:64954641-64954660 Msa0655950:intron 45.0%
ACAACTACAACCACCAAGCA+AGG - chr4_3:64954657-64954676 None:intergenic 45.0%
AAGTGTGTGTGTGAGGTAAG+TGG + chr4_3:64955007-64955026 Msa0655950:intron 45.0%
AAGTGGAGACACTGCATTTG+AGG + chr4_3:64955024-64955043 Msa0655950:intron 45.0%
AGTGGAGACACTGCATTTGA+GGG + chr4_3:64955025-64955044 Msa0655950:intron 45.0%
GGAAGCAGTGATTGCGAATA+TGG + chr4_3:64955715-64955734 Msa0655950:five_prime_UTR 45.0%
AGCAGTAAACACCTGACAAG+TGG + chr4_3:64955769-64955788 Msa0655950:five_prime_UTR 45.0%
GCAACAGACATCCAACTGTT+TGG - chr4_3:64956101-64956120 None:intergenic 45.0%
ACAGTTGGATGTCTGTTGCA+TGG + chr4_3:64956102-64956121 Msa0655950:five_prime_UTR 45.0%
! TCAAGGGTGTATGGAGTGTA+TGG - chr4_3:64956317-64956336 None:intergenic 45.0%
AAGCCTGTGTTTATCTGCAG+TGG + chr4_3:64956356-64956375 Msa0655950:intron 45.0%
ATGCCACTGCAGATAAACAC+AGG - chr4_3:64956362-64956381 None:intergenic 45.0%
GTTTATCTGCAGTGGCATCT+TGG + chr4_3:64956364-64956383 Msa0655950:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG + chr4_3:64956520-64956539 Msa0655950:intron 45.0%
CGGCCTCTTGTGTAAAAAAC+AGG + chr4_3:64956565-64956584 Msa0655950:intron 45.0%
CGTACAATGCACCAAATGGT+GGG + chr4_3:64956597-64956616 Msa0655950:intron 45.0%
! AGCGAAGATGCTTGTGGTTT+TGG + chr4_3:64956843-64956862 Msa0655950:intron 45.0%
AAAAAAACTACAGAGCGGGG+GGG - chr4_3:64957420-64957439 None:intergenic 45.0%
TGATAACAGGTGTGGATCGA+AGG - chr4_3:64957486-64957505 None:intergenic 45.0%
TCGATCCACACCTGTTATCA+AGG + chr4_3:64957486-64957505 Msa0655950:intron 45.0%
AAACTTCCGTTCAACCCACT+AGG + chr4_3:64957578-64957597 Msa0655950:intron 45.0%
!! GAGGAGCATTTGGATTAACG+GGG - chr4_3:64957682-64957701 None:intergenic 45.0%
CAAGGAATCTTGTGAATCCC+AGG - chr4_3:64957762-64957781 None:intergenic 45.0%
! CGTTTCTTTCCCGTGTTGTT+CGG + chr4_3:64957816-64957835 Msa0655950:intron 45.0%
TCTCACTCACAATTCACTGC+TGG + chr4_3:64957877-64957896 Msa0655950:intron 45.0%
CTCACTCACAATTCACTGCT+GGG + chr4_3:64957878-64957897 Msa0655950:intron 45.0%
AGCAATGGAACAATCTCCCT+TGG - chr4_3:64957937-64957956 None:intergenic 45.0%
GCAAGCAAGATACTCAGCAA+TGG - chr4_3:64957952-64957971 None:intergenic 45.0%
AATTGATCGCGATGGGTGAT+AGG - chr4_3:64958014-64958033 None:intergenic 45.0%
TCCAGCAAGAGCAAGACTAA+AGG - chr4_3:64958340-64958359 None:intergenic 45.0%
!!! GGAATGCTCACTGGTTTTGA+TGG + chr4_3:64958373-64958392 Msa0655950:intron 45.0%
GAACTGTGACTTAGGAACGA+AGG - chr4_3:64958403-64958422 None:intergenic 45.0%
ATTTCAGGCAAGAAAGTGGC+CGG + chr4_3:64958527-64958546 Msa0655950:intron 45.0%
TGGATTGAAGGATGTGGTCA+AGG - chr4_3:64958570-64958589 None:intergenic 45.0%
! CAGAACCATACAGGTTTTCC+TGG + chr4_3:64958806-64958825 Msa0655950:intron 45.0%
ATTGTCCTAGCATTCGTTGG+TGG - chr4_3:64959154-64959173 None:intergenic 45.0%
!!! GCACTGGCTTGGTCTAATTT+TGG - chr4_3:64959266-64959285 None:intergenic 45.0%
!! AGATGTTGTAAGCACTGGCT+TGG - chr4_3:64959277-64959296 None:intergenic 45.0%
GCTTCAGTTGCAGTTAGCAT+TGG - chr4_3:64959356-64959375 None:intergenic 45.0%
! GATGTCACACCTTCTAGTTG+GGG - chr4_3:64959378-64959397 None:intergenic 45.0%
!! CTCACAGCTTTGAACCAGAT+CGG + chr4_3:64959483-64959502 Msa0655950:intron 45.0%
ATCAGCACCAAAGAGACACT+TGG + chr4_3:64959552-64959571 Msa0655950:intron 45.0%
! TGCAGAATTGCTACTTGTGC+AGG - chr4_3:64959700-64959719 None:intergenic 45.0%
! TTTTGTTCCGTTGCAGGAAG+TGG + chr4_3:64960020-64960039 Msa0655950:intron 45.0%
TCACTGGGATAAACCAGTAC+AGG - chr4_3:64960059-64960078 None:intergenic 45.0%
! ACTGGTTTATCCCAGTGAGA+TGG + chr4_3:64960061-64960080 Msa0655950:CDS 45.0%
GTTTATCCCAGTGAGATGGA+TGG + chr4_3:64960065-64960084 Msa0655950:CDS 45.0%
AGCCATTGCAAAAGTAGGGA+TGG - chr4_3:64960105-64960124 None:intergenic 45.0%
AGGCAGCCATTGCAAAAGTA+GGG - chr4_3:64960109-64960128 None:intergenic 45.0%
TAGGCAGCCATTGCAAAAGT+AGG - chr4_3:64960110-64960129 None:intergenic 45.0%
AGTAATGAATTCCCTCGTGC+AGG + chr4_3:64960178-64960197 Msa0655950:CDS 45.0%
GCATGCCAGTTATATTCCCT+CGG + chr4_3:64960297-64960316 Msa0655950:three_prime_UTR 45.0%
GCACCACGGCAATGAAATTA+AGG - chr4_3:64960334-64960353 None:intergenic 45.0%
GCCATCACAATCTCTACAGA+TGG - chr4_3:64960376-64960395 None:intergenic 45.0%
CTGTAGAGATTGTGATGGCA+CGG + chr4_3:64960377-64960396 Msa0655950:three_prime_UTR 45.0%
! AGTGGAACTCCCTTCTGAAA+AGG + chr4_3:64960529-64960548 Msa0655950:three_prime_UTR 45.0%
! GTGGAACTCCCTTCTGAAAA+GGG + chr4_3:64960530-64960549 Msa0655950:three_prime_UTR 45.0%
! TGGAACTCCCTTCTGAAAAG+GGG + chr4_3:64960531-64960550 Msa0655950:three_prime_UTR 45.0%
! GCTGAGACCCCTTTAATTTC+TGG + chr4_3:64960654-64960673 Msa0655950:three_prime_UTR 45.0%
CTAGATTTCACTGTGTGGTG+TGG + chr4_3:64960726-64960745 Msa0655950:three_prime_UTR 45.0%
! TGTGTGGTGTGGCACAATTT+TGG + chr4_3:64960737-64960756 Msa0655950:three_prime_UTR 45.0%
!! AGAATATAAAAAATAAAATA+AGG - chr4_3:64955405-64955424 None:intergenic 5.0%
! CTGGGTACTGCACTGCAATT+TGG + chr4_3:64950794-64950813 Msa0655950:five_prime_UTR 50.0%
GGTACTGCACTGCAATTTGG+TGG + chr4_3:64950797-64950816 Msa0655950:five_prime_UTR 50.0%
CGGTGTCTGTGTTTGTGCTT+TGG - chr4_3:64951207-64951226 None:intergenic 50.0%
GCATGTCTGACACATGACAC+AGG + chr4_3:64951318-64951337 Msa0655950:intron 50.0%
AAAAGTCGAGTGCCAAGCCA+AGG + chr4_3:64951874-64951893 Msa0655950:five_prime_UTR 50.0%
TATGTTGAGCAGTGGCCTCA+TGG - chr4_3:64952788-64952807 None:intergenic 50.0%
CGGAGGGTTTGAGAGATCTA+AGG + chr4_3:64952928-64952947 Msa0655950:intron 50.0%
! GAGTGATTAGTGTCGCTCCA+TGG - chr4_3:64953310-64953329 None:intergenic 50.0%
TGCAAATCGAGGCCAGATAG+TGG + chr4_3:64953364-64953383 Msa0655950:intron 50.0%
! TCACGGATGTAGAAGCGCAA+TGG - chr4_3:64953572-64953591 None:intergenic 50.0%
! GCATAGCGGCACTTTGTTTC+CGG + chr4_3:64953604-64953623 Msa0655950:intron 50.0%
! CACTTTGTTTCCGGCGATAG+AGG + chr4_3:64953613-64953632 Msa0655950:intron 50.0%
TTTGTTTCCGGCGATAGAGG+AGG + chr4_3:64953616-64953635 Msa0655950:intron 50.0%
CAGAACGCCTATTGTGAAGG+GGG - chr4_3:64953763-64953782 None:intergenic 50.0%
TCTTCCCAATAGCAGTCACC+TGG + chr4_3:64953984-64954003 Msa0655950:intron 50.0%
GATAGCCAGGTGACTGCTAT+TGG - chr4_3:64953992-64954011 None:intergenic 50.0%
GCTTAGTCTGTTGGACCTCA+AGG - chr4_3:64954190-64954209 None:intergenic 50.0%
CCTATCCCCATCATACCTCA+AGG - chr4_3:64954294-64954313 None:intergenic 50.0%
! CCTTGAGGTATGATGGGGAT+AGG + chr4_3:64954291-64954310 Msa0655950:intron 50.0%
GTTAACCTCACCTTGCTTGG+TGG + chr4_3:64954644-64954663 Msa0655950:intron 50.0%
TACAACCACCAAGCAAGGTG+AGG - chr4_3:64954652-64954671 None:intergenic 50.0%
GAAAAAGTTTGGCTGACCGC+TGG + chr4_3:64954966-64954985 Msa0655950:intron 50.0%
CTGAAATCTCGATGGCGACA+AGG - chr4_3:64955289-64955308 None:intergenic 50.0%
GAGAAGAGACACCACTTGTC+AGG - chr4_3:64955783-64955802 None:intergenic 50.0%
CTTCTCAATGACATGAGGGC+AGG - chr4_3:64956065-64956084 None:intergenic 50.0%
GGGTGTATGGAGTGTATGGT+AGG - chr4_3:64956313-64956332 None:intergenic 50.0%
ACACTCCATACACCCTTGAC+AGG + chr4_3:64956318-64956337 Msa0655950:CDS 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr4_3:64956504-64956523 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG + chr4_3:64956526-64956545 Msa0655950:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG + chr4_3:64956527-64956546 Msa0655950:intron 50.0%
ACGGGTTCAAGTCCTGGAAA+CGG + chr4_3:64956545-64956564 Msa0655950:intron 50.0%
TTACACAAGAGGCCGTTTCC+AGG - chr4_3:64956560-64956579 None:intergenic 50.0%
GCTGCGTACAATGCACCAAA+TGG + chr4_3:64956593-64956612 Msa0655950:intron 50.0%
GCGTACAATGCACCAAATGG+TGG + chr4_3:64956596-64956615 Msa0655950:intron 50.0%
AGTAACTGCAGTATCTGCCC+TGG + chr4_3:64957197-64957216 Msa0655950:intron 50.0%
AAAAAACTACAGAGCGGGGG+GGG - chr4_3:64957419-64957438 None:intergenic 50.0%
!! CCACAACCTAGTGGGTTGAA+CGG - chr4_3:64957587-64957606 None:intergenic 50.0%
TCATCGAGCCACAACCTAGT+GGG - chr4_3:64957595-64957614 None:intergenic 50.0%
GAATCCCAGGTCGTATAAGC+TGG - chr4_3:64957749-64957768 None:intergenic 50.0%
GGAACAATCTCCCTTGGTGA+TGG - chr4_3:64957931-64957950 None:intergenic 50.0%
!! GCCTTTAGTCTTGCTCTTGC+TGG + chr4_3:64958336-64958355 Msa0655950:intron 50.0%
CTGAAGGTCCGAATTTCCCA+AGG - chr4_3:64958442-64958461 None:intergenic 50.0%
TTTCAGGCAAGAAAGTGGCC+GGG + chr4_3:64958528-64958547 Msa0655950:intron 50.0%
GGCCGGGTGCAATTTCAATT+CGG + chr4_3:64958544-64958563 Msa0655950:intron 50.0%
GGCCGAATTGAAATTGCACC+CGG - chr4_3:64958549-64958568 None:intergenic 50.0%
ATTGTACGGAGGACAGCTCA+GGG - chr4_3:64958630-64958649 None:intergenic 50.0%
TATTGTACGGAGGACAGCTC+AGG - chr4_3:64958631-64958650 None:intergenic 50.0%
TCTGACATGCACCACTATGG+AGG - chr4_3:64958790-64958809 None:intergenic 50.0%
! GGTTCTGACATGCACCACTA+TGG - chr4_3:64958793-64958812 None:intergenic 50.0%
GGTGCATGTCAGAACCATAC+AGG + chr4_3:64958797-64958816 Msa0655950:intron 50.0%
TCGGTCCAGGAAAACCTGTA+TGG - chr4_3:64958814-64958833 None:intergenic 50.0%
GGTTAGGTTTGGGAGAGTCT+AGG - chr4_3:64959008-64959027 None:intergenic 50.0%
AGGTGCAAGCTCAATACCCA+AGG - chr4_3:64959093-64959112 None:intergenic 50.0%
CAACTGAAGCCCCAACTAGA+AGG + chr4_3:64959366-64959385 Msa0655950:intron 50.0%
! CGATCTGGTTCAAAGCTGTG+AGG - chr4_3:64959485-64959504 None:intergenic 50.0%
AGTAGGACCACTTCCTGCAA+CGG - chr4_3:64960030-64960049 None:intergenic 50.0%
GGATAAACCAGTACAGGACC+AGG - chr4_3:64960053-64960072 None:intergenic 50.0%
GGTACACCATCCATCTCACT+GGG - chr4_3:64960074-64960093 None:intergenic 50.0%
TGGTACACCATCCATCTCAC+TGG - chr4_3:64960075-64960094 None:intergenic 50.0%
TTTATCTGCAGCCTGCACGA+GGG - chr4_3:64960192-64960211 None:intergenic 50.0%
ATTTATCTGCAGCCTGCACG+AGG - chr4_3:64960193-64960212 None:intergenic 50.0%
TCGTGCAGGCTGCAGATAAA+TGG + chr4_3:64960192-64960211 Msa0655950:CDS 50.0%
GCTAGTTCAGGTGAATCACC+CGG + chr4_3:64960220-64960239 Msa0655950:CDS 50.0%
GGTTGTGACAGCCTAGTTGT+AGG + chr4_3:64960398-64960417 Msa0655950:three_prime_UTR 50.0%
! GGAACTCCCTTCTGAAAAGG+GGG + chr4_3:64960532-64960551 Msa0655950:three_prime_UTR 50.0%
TGCTCTGATGGTAGGAGAGA+TGG + chr4_3:64960782-64960801 Msa0655950:three_prime_UTR 50.0%
GTCCTGTAGTGTGTCGTGTC+CGG - chr4_3:64951227-64951246 None:intergenic 55.0%
CGACACACTACAGGACACAC+TGG + chr4_3:64951231-64951250 Msa0655950:intron 55.0%
! GAGTGGAGTGCTTATGGTGC+TGG + chr4_3:64951762-64951781 Msa0655950:five_prime_UTR 55.0%
GGGGTTTGCACCTAAGAGTG+AGG + chr4_3:64953025-64953044 Msa0655950:intron 55.0%
TAGCAGAGTGGGAATGGCCA+TGG + chr4_3:64953290-64953309 Msa0655950:intron 55.0%
GCAGTAGCTGCTGCAAATCG+AGG + chr4_3:64953353-64953372 Msa0655950:intron 55.0%
GAAAACGCCTCCTCTATCGC+CGG - chr4_3:64953626-64953645 None:intergenic 55.0%
!!! GCGATAGAGGAGGCGTTTTC+TGG + chr4_3:64953626-64953645 Msa0655950:intron 55.0%
CAAGCAGCCCCCTTCACAAT+AGG + chr4_3:64953753-64953772 Msa0655950:intron 55.0%
GACATTGCCTTGTCAGCCAG+CGG - chr4_3:64955943-64955962 None:intergenic 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr4_3:64956539-64956558 Msa0655950:intron 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr4_3:64956641-64956660 Msa0655950:intron 55.0%
CCGTTCAACCCACTAGGTTG+TGG + chr4_3:64957584-64957603 Msa0655950:intron 55.0%
CTCATCGAGCCACAACCTAG+TGG - chr4_3:64957596-64957615 None:intergenic 55.0%
TGCGAGTGCACCGAACAACA+CGG - chr4_3:64957829-64957848 None:intergenic 55.0%
GGTGCACTCGCATCAACTCT+GGG + chr4_3:64957837-64957856 Msa0655950:intron 55.0%
GCTCTTGCTGGATTCTCCCA+TGG + chr4_3:64958348-64958367 Msa0655950:intron 55.0%
TTGCTGGATTCTCCCATGGC+AGG + chr4_3:64958352-64958371 Msa0655950:intron 55.0%
CCAGTGAGCATTCCTGCCAT+GGG - chr4_3:64958367-64958386 None:intergenic 55.0%
ACCAGTGAGCATTCCTGCCA+TGG - chr4_3:64958368-64958387 None:intergenic 55.0%
TTGTACGGAGGACAGCTCAG+GGG - chr4_3:64958629-64958648 None:intergenic 55.0%
ACATGCACCACTATGGAGGC+AGG - chr4_3:64958786-64958805 None:intergenic 55.0%
!! TGGTATTGGAGCATCGGTCC+AGG - chr4_3:64958827-64958846 None:intergenic 55.0%
TCCTACTCCTGGTCCTGTAC+TGG + chr4_3:64960043-64960062 Msa0655950:CDS 55.0%
ACCAGTACAGGACCAGGAGT+AGG - chr4_3:64960047-64960066 None:intergenic 55.0%
CACCGGACACGACACACTAC+AGG + chr4_3:64951222-64951241 Msa0655950:intron 60.0%
TCCTTATGGCCGTGAACCGC+TGG + chr4_3:64955924-64955943 Msa0655950:five_prime_UTR 60.0%
CCTTGTCAGCCAGCGGTTCA+CGG - chr4_3:64955936-64955955 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr4_3:64956609-64956628 Msa0655950:intron 60.0%
CTAAAGCTCCCGCATACGCG+AGG - chr4_3:64956636-64956655 None:intergenic 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr4_3:64956642-64956661 Msa0655950:intron 60.0%
GCGAGTGCACCGAACAACAC+GGG - chr4_3:64957828-64957847 None:intergenic 60.0%
CGGTGCACTCGCATCAACTC+TGG + chr4_3:64957836-64957855 Msa0655950:intron 60.0%
CCCATGGCAGGAATGCTCAC+TGG + chr4_3:64958364-64958383 Msa0655950:intron 60.0%
TGTACGGAGGACAGCTCAGG+GGG - chr4_3:64958628-64958647 None:intergenic 60.0%
CTCGAGTCCTGCCTCCATAG+TGG + chr4_3:64958776-64958795 Msa0655950:intron 60.0%
GCAGGAAGTGGTCCTACTCC+TGG + chr4_3:64960032-64960051 Msa0655950:intron 60.0%
GCCAGCGGTTCACGGCCATA+AGG - chr4_3:64955928-64955947 None:intergenic 65.0%
! CCGTGAACCGCTGGCTGACA+AGG + chr4_3:64955933-64955952 Msa0655950:five_prime_UTR 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr4_3:64956611-64956630 None:intergenic 65.0%
CATACGCGAGGTCCGGGAAG+GGG - chr4_3:64956624-64956643 None:intergenic 65.0%
GCATACGCGAGGTCCGGGAA+GGG - chr4_3:64956625-64956644 None:intergenic 65.0%
CTTCCCGGACCTCGCGTATG+CGG + chr4_3:64956624-64956643 Msa0655950:intron 65.0%
TTCCCGGACCTCGCGTATGC+GGG + chr4_3:64956625-64956644 Msa0655950:intron 65.0%
GTACGGAGGACAGCTCAGGG+GGG - chr4_3:64958627-64958646 None:intergenic 65.0%
CGCATACGCGAGGTCCGGGA+AGG - chr4_3:64956626-64956645 None:intergenic 70.0%
CTCCCGCATACGCGAGGTCC+GGG - chr4_3:64956630-64956649 None:intergenic 70.0%
GCTCCCGCATACGCGAGGTC+CGG - chr4_3:64956631-64956650 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 64950454 64961022 64950454 ID=Msa0655950;Name=Msa0655950
chr4_3 mRNA 64950454 64961022 64950454 ID=Msa0655950-mRNA-1;Parent=Msa0655950;Name=Msa0655950-mRNA-1;_AED=0.02;_eAED=0.02;_QI=1253|1|1|1|0.5|0.6|5|739|117
chr4_3 exon 64950454 64951003 64950454 ID=Msa0655950-mRNA-1:exon:18388;Parent=Msa0655950-mRNA-1
chr4_3 exon 64951681 64951895 64951681 ID=Msa0655950-mRNA-1:exon:18389;Parent=Msa0655950-mRNA-1
chr4_3 exon 64955663 64955954 64955663 ID=Msa0655950-mRNA-1:exon:18390;Parent=Msa0655950-mRNA-1
chr4_3 exon 64956038 64956339 64956038 ID=Msa0655950-mRNA-1:exon:18391;Parent=Msa0655950-mRNA-1
chr4_3 exon 64960036 64961022 64960036 ID=Msa0655950-mRNA-1:exon:18392;Parent=Msa0655950-mRNA-1
chr4_3 five_prime_UTR 64950454 64951003 64950454 ID=Msa0655950-mRNA-1:five_prime_utr;Parent=Msa0655950-mRNA-1
chr4_3 five_prime_UTR 64951681 64951895 64951681 ID=Msa0655950-mRNA-1:five_prime_utr;Parent=Msa0655950-mRNA-1
chr4_3 five_prime_UTR 64955663 64955954 64955663 ID=Msa0655950-mRNA-1:five_prime_utr;Parent=Msa0655950-mRNA-1
chr4_3 five_prime_UTR 64956038 64956233 64956038 ID=Msa0655950-mRNA-1:five_prime_utr;Parent=Msa0655950-mRNA-1
chr4_3 CDS 64956234 64956339 64956234 ID=Msa0655950-mRNA-1:cds;Parent=Msa0655950-mRNA-1
chr4_3 CDS 64960036 64960283 64960036 ID=Msa0655950-mRNA-1:cds;Parent=Msa0655950-mRNA-1
chr4_3 three_prime_UTR 64960284 64961022 64960284 ID=Msa0655950-mRNA-1:three_prime_utr;Parent=Msa0655950-mRNA-1
Gene Sequence

>Msa0655950

ATGTCACTTTATAGGTATCCTATATATCGAATACCCACAGGCCCTACTTTAAAAGATTTAGATGCGTGCTTTCTAACCTACCATACACTCCATACACCCTTGACAGGAAGTGGTCCTACTCCTGGTCCTGTACTGGTTTATCCCAGTGAGATGGATGGTGTACCAAATATTTCCATCCCTACTTTTGCAATGGCTGCCTATAAATTAAAGGGATCTATTTGGATGAAAAAAGAAGTTAGTGAGAATCAAGTAATGAATTCCCTCGTGCAGGCTGCAGATAAATGGTTAAGGCTAGTTCAGGTGAATCACCCGGATCATCAGTTCTTTAAATCGCATGGCACATACTACAAATGA
Protein sequence

>Msa0655950

MSLYRYPIYRIPTGPTLKDLDACFLTYHTLHTPLTGSGPTPGPVLVYPSEMDGVPNISIPTFAMAAYKLKGSIWMKKEVSENQVMNSLVQAADKWLRLVQVNHPDHQFFKSHGTYYK*