Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656970 | XP_003629728.1 | 85.650 | 446 | 31 | 6 | 14 | 445 | 1 | 427 | 0.0 | 747 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0174100 | Msa0656970 | 0.813481 | 2.504487e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656970 | MtrunA17_Chr8g0378741 | 85.650 | 446 | 31 | 6 | 14 | 445 | 1 | 427 | 0.0 | 747 |
| Msa0656970 | MtrunA17_Chr4g0063281 | 45.455 | 253 | 105 | 4 | 14 | 233 | 1 | 253 | 1.00e-62 | 207 |
| Msa0656970 | MtrunA17_Chr7g0237691 | 42.180 | 211 | 91 | 3 | 54 | 233 | 19 | 229 | 9.58e-49 | 170 |
| Msa0656970 | MtrunA17_Chr3g0115161 | 43.367 | 196 | 103 | 3 | 47 | 242 | 36 | 223 | 5.25e-47 | 164 |
| Msa0656970 | MtrunA17_Chr4g0051231 | 44.324 | 185 | 88 | 3 | 54 | 233 | 46 | 220 | 4.49e-46 | 164 |
| Msa0656970 | MtrunA17_Chr1g0148061 | 41.053 | 190 | 92 | 4 | 56 | 242 | 23 | 195 | 8.90e-44 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0656970 | AT1G68140.1 | 43.204 | 206 | 90 | 4 | 32 | 233 | 22 | 204 | 3.07e-50 | 174 |
| Msa0656970 | AT1G68140.4 | 43.204 | 206 | 90 | 4 | 32 | 233 | 22 | 204 | 3.07e-50 | 174 |
| Msa0656970 | AT1G68140.3 | 43.204 | 206 | 90 | 4 | 32 | 233 | 22 | 204 | 3.07e-50 | 174 |
| Msa0656970 | AT1G68140.2 | 43.204 | 206 | 90 | 4 | 32 | 233 | 22 | 204 | 3.14e-50 | 173 |
| Msa0656970 | AT3G24740.3 | 41.346 | 208 | 92 | 3 | 54 | 233 | 19 | 224 | 3.74e-47 | 166 |
| Msa0656970 | AT3G24740.1 | 41.346 | 208 | 92 | 3 | 54 | 233 | 19 | 224 | 3.74e-47 | 166 |
| Msa0656970 | AT3G24740.5 | 41.346 | 208 | 92 | 3 | 54 | 233 | 19 | 224 | 3.74e-47 | 166 |
| Msa0656970 | AT3G24740.6 | 41.346 | 208 | 92 | 3 | 54 | 233 | 19 | 224 | 3.74e-47 | 166 |
| Msa0656970 | AT3G24740.2 | 41.346 | 208 | 92 | 3 | 54 | 233 | 19 | 224 | 3.74e-47 | 166 |
| Msa0656970 | AT3G24740.4 | 41.346 | 208 | 92 | 3 | 54 | 233 | 19 | 224 | 3.74e-47 | 166 |
| Msa0656970 | AT4G08460.4 | 36.967 | 211 | 103 | 2 | 32 | 242 | 20 | 200 | 1.35e-44 | 157 |
| Msa0656970 | AT4G08460.1 | 36.967 | 211 | 103 | 2 | 32 | 242 | 20 | 200 | 1.35e-44 | 157 |
| Msa0656970 | AT4G08460.2 | 36.967 | 211 | 103 | 2 | 32 | 242 | 20 | 200 | 1.35e-44 | 157 |
| Msa0656970 | AT4G08460.3 | 36.967 | 211 | 103 | 2 | 32 | 242 | 20 | 200 | 1.35e-44 | 157 |
| Msa0656970 | AT4G31410.1 | 42.246 | 187 | 88 | 2 | 56 | 242 | 29 | 195 | 6.86e-44 | 156 |
| Msa0656970 | AT4G31410.2 | 42.246 | 187 | 88 | 2 | 56 | 242 | 29 | 195 | 6.86e-44 | 156 |
| Msa0656970 | AT4G31410.3 | 42.246 | 187 | 88 | 2 | 56 | 242 | 29 | 195 | 6.86e-44 | 156 |
| Msa0656970 | AT1G77770.3 | 39.683 | 189 | 82 | 1 | 54 | 242 | 24 | 180 | 8.26e-37 | 136 |
| Msa0656970 | AT1G77770.2 | 39.683 | 189 | 82 | 1 | 54 | 242 | 24 | 180 | 8.26e-37 | 136 |
| Msa0656970 | AT1G77770.1 | 39.683 | 189 | 82 | 1 | 54 | 242 | 24 | 180 | 8.30e-37 | 136 |
| Msa0656970 | AT1G80220.1 | 37.981 | 208 | 95 | 4 | 32 | 238 | 19 | 193 | 1.47e-36 | 135 |
| Msa0656970 | AT1G15430.1 | 37.430 | 179 | 80 | 1 | 51 | 229 | 43 | 189 | 6.07e-36 | 134 |
| Msa0656970 | AT1G15430.2 | 37.430 | 179 | 80 | 1 | 51 | 229 | 43 | 189 | 6.07e-36 | 134 |
| Msa0656970 | AT3G25910.1 | 56.818 | 88 | 38 | 0 | 146 | 233 | 173 | 260 | 3.59e-27 | 112 |
| Msa0656970 | AT3G25910.1 | 55.682 | 88 | 34 | 3 | 14 | 101 | 1 | 83 | 5.50e-22 | 97.4 |
| Msa0656970 | AT2G26050.1 | 35.673 | 171 | 69 | 5 | 81 | 249 | 38 | 169 | 1.61e-23 | 99.0 |
Find 138 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCACCTTTATAATATA+TGG | 0.200001 | 4_3:-66357088 | None:intergenic |
| CATCATTTCTTTGGATGATT+TGG | 0.208773 | 4_3:+66357120 | Msa0656970:three_prime_UTR |
| GACCTGCCTAGACCTAATTT+TGG | 0.218036 | 4_3:+66355767 | Msa0656970:CDS |
| CTGTCATGTGATGGCATTCT+AGG | 0.252643 | 4_3:-66356640 | None:intergenic |
| ATCATGTAACATCATTTCTT+TGG | 0.265997 | 4_3:+66357111 | Msa0656970:three_prime_UTR |
| TTCTGAGACGTGTGAGTTCC+AGG | 0.270482 | 4_3:+66356177 | Msa0656970:CDS |
| GATCGCCCTCTTCTAACTTT+TGG | 0.272975 | 4_3:-66355689 | None:intergenic |
| AGCTTATCTGCCCTCTTTGC+CGG | 0.288827 | 4_3:+66356083 | Msa0656970:CDS |
| TATGATTTCTCTGATTAGTA+TGG | 0.296233 | 4_3:-66356717 | None:intergenic |
| CTCCATGTCGCCTGAGGCTT+TGG | 0.298490 | 4_3:+66356372 | Msa0656970:CDS |
| TCATCAGCCGATCCAAAATT+AGG | 0.307268 | 4_3:-66355779 | None:intergenic |
| TCGTCCTGTACTGGCATTCT+AGG | 0.308700 | 4_3:-66356463 | None:intergenic |
| CTTTGCCGGGGAGGAATATA+TGG | 0.311985 | 4_3:+66356097 | Msa0656970:CDS |
| TTTCCTTCCATATATTATAA+AGG | 0.313781 | 4_3:+66357081 | Msa0656970:three_prime_UTR |
| GACCAATTCTGTAAGTTGTT+TGG | 0.314018 | 4_3:+66355941 | Msa0656970:CDS |
| CCACATTGGGAGGGGTTCCC+AGG | 0.321346 | 4_3:-66356043 | None:intergenic |
| CGTGAAATTTACTCTGTTGA+AGG | 0.340333 | 4_3:+66356406 | Msa0656970:CDS |
| AACCAAACAACTTACAGAAT+TGG | 0.341143 | 4_3:-66355943 | None:intergenic |
| CAAAGGTTGGATAGAATATA+TGG | 0.344974 | 4_3:-66357244 | None:intergenic |
| TCTTCGTCTAGAAGGATTCC+TGG | 0.365511 | 4_3:+66356937 | Msa0656970:CDS |
| GCAACAATTCTTCGTCTAGA+AGG | 0.368682 | 4_3:+66356929 | Msa0656970:CDS |
| TGAGGAATTTCCATGCAAAT+AGG | 0.372859 | 4_3:-66355830 | None:intergenic |
| GGGAGGAATATATGGATATA+TGG | 0.377337 | 4_3:+66356105 | Msa0656970:CDS |
| ATTCTGATGGACAAAATATC+TGG | 0.378474 | 4_3:+66357027 | Msa0656970:three_prime_UTR |
| TTGCAGCTTGCTCCCACATT+GGG | 0.386248 | 4_3:-66356056 | None:intergenic |
| GCTTATCTGCCCTCTTTGCC+GGG | 0.394644 | 4_3:+66356084 | Msa0656970:CDS |
| ACATGTGCAATACCAGTTAC+AGG | 0.404371 | 4_3:+66355903 | Msa0656970:CDS |
| GATCAAACATTTCGCCTTCA+AGG | 0.419238 | 4_3:+66356794 | Msa0656970:CDS |
| ACAGTTGGAGTGCCTGTAAC+TGG | 0.422118 | 4_3:-66355915 | None:intergenic |
| GTTGCAGCTTGCTCCCACAT+TGG | 0.424476 | 4_3:-66356057 | None:intergenic |
| GCTTGCTCCCACATTGGGAG+GGG | 0.424566 | 4_3:-66356051 | None:intergenic |
| AATACACCCAATGCCGTTGC+TGG | 0.425129 | 4_3:-66356517 | None:intergenic |
| CAAGAACAGTCTCTCATGAT+AGG | 0.427443 | 4_3:+66356005 | Msa0656970:CDS |
| CTGTTGAAGGCAACACTGAC+TGG | 0.428366 | 4_3:+66356419 | Msa0656970:CDS |
| GTTGAAGATGTTCTGACCCT+GGG | 0.432531 | 4_3:-66356862 | None:intergenic |
| CAGCTTGCTCCCACATTGGG+AGG | 0.432690 | 4_3:-66356053 | None:intergenic |
| CAAAGAGGGCAGATAAGCTT+TGG | 0.436235 | 4_3:-66356079 | None:intergenic |
| CACATGCCAGCAACGGCATT+GGG | 0.446199 | 4_3:+66356511 | Msa0656970:CDS |
| TAATCTCTCATCAGCAATGC+TGG | 0.447552 | 4_3:+66355967 | Msa0656970:CDS |
| TAAGTTCTGGATATGTGCCC+TGG | 0.452432 | 4_3:-66356195 | None:intergenic |
| CTAGCATGCTTCCTAAGTTC+TGG | 0.453642 | 4_3:-66356208 | None:intergenic |
| TTTCTTTGGATGATTTGGTT+CGG | 0.454919 | 4_3:+66357125 | Msa0656970:three_prime_UTR |
| AGGAAAGCTCAGTCAGAGCC+TGG | 0.456396 | 4_3:+66356025 | Msa0656970:CDS |
| CATTTGCGTTGGCGCAATCA+AGG | 0.461043 | 4_3:+66356964 | Msa0656970:CDS |
| AGCTTGCTCCCACATTGGGA+GGG | 0.461937 | 4_3:-66356052 | None:intergenic |
| CGGCTGATGAAATGAAAGAA+TGG | 0.463244 | 4_3:+66355792 | Msa0656970:CDS |
| TTCAGAAGAACAGTGTTATG+AGG | 0.469509 | 4_3:-66355848 | None:intergenic |
| TGTTGAAGATGTTCTGACCC+TGG | 0.476149 | 4_3:-66356863 | None:intergenic |
| TGACTGTGAGGCATCCTTGA+AGG | 0.477107 | 4_3:-66356808 | None:intergenic |
| AATGTTTGATCTCCTCCATC+TGG | 0.477364 | 4_3:-66356782 | None:intergenic |
| TCAGACCATTCGTCCTGTAC+TGG | 0.478756 | 4_3:-66356472 | None:intergenic |
| ATCCGTCACGTCAGTATGAC+TGG | 0.478839 | 4_3:+66356266 | Msa0656970:CDS |
| TTGCTCCGGGGATTAGTATG+AGG | 0.480173 | 4_3:-66356910 | None:intergenic |
| ACTTAGGAAGCATGCTAGGC+TGG | 0.484512 | 4_3:+66356213 | Msa0656970:CDS |
| TGAAAGAATGGGATGATACT+AGG | 0.484698 | 4_3:+66355804 | Msa0656970:CDS |
| AGACGAAGAATTGTTGCTCC+GGG | 0.485667 | 4_3:-66356923 | None:intergenic |
| ATCTCCTCCATCTGGCCATA+CGG | 0.487420 | 4_3:-66356774 | None:intergenic |
| CACGTCAGTATGACTGGCTT+AGG | 0.489771 | 4_3:+66356272 | Msa0656970:CDS |
| GAAATGTTCTTCTTATGAGA+AGG | 0.497789 | 4_3:+66355868 | Msa0656970:CDS |
| AAATCGTCAACTTCAAAGGT+TGG | 0.498041 | 4_3:-66357257 | None:intergenic |
| CTGTTGAAGAGGACACTGAC+TGG | 0.499351 | 4_3:+66356587 | Msa0656970:CDS |
| ATCCACTGCAATCTATAGAC+GGG | 0.499760 | 4_3:-66355712 | None:intergenic |
| TAGACGAAGAATTGTTGCTC+CGG | 0.501598 | 4_3:-66356924 | None:intergenic |
| ATCAATGCAAGTTCTGATGC+AGG | 0.502570 | 4_3:+66356334 | Msa0656970:CDS |
| TGTTGAGAATTATTATAGAG+AGG | 0.506512 | 4_3:+66356834 | Msa0656970:CDS |
| TAACTGGTATTGCACATGTA+AGG | 0.507897 | 4_3:-66355899 | None:intergenic |
| AATCAGAGAAATCATAGAGC+TGG | 0.517760 | 4_3:+66356724 | Msa0656970:CDS |
| GGCAAAATCGTCAACTTCAA+AGG | 0.518861 | 4_3:-66357261 | None:intergenic |
| CGCCAACGCAAATGACTACC+AGG | 0.519090 | 4_3:-66356955 | None:intergenic |
| GTCAGTGTCCTCTTCAACAG+AGG | 0.523359 | 4_3:-66356584 | None:intergenic |
| CAGTTCATATACCTTCGAGC+AGG | 0.523725 | 4_3:-66356136 | None:intergenic |
| AAATGTTCTTCTTATGAGAA+GGG | 0.527142 | 4_3:+66355869 | Msa0656970:CDS |
| TGACTGGCTTAGGATGGAAC+AGG | 0.527505 | 4_3:+66356282 | Msa0656970:CDS |
| GACAAATCCCTCTGTTGAAG+AGG | 0.528060 | 4_3:+66356576 | Msa0656970:CDS |
| GGCTGATGAAATGAAAGAAT+GGG | 0.532713 | 4_3:+66355793 | Msa0656970:CDS |
| CAGAACTTAGGAAGCATGCT+AGG | 0.534979 | 4_3:+66356209 | Msa0656970:CDS |
| ATCCAAAATTAGGTCTAGGC+AGG | 0.539299 | 4_3:-66355769 | None:intergenic |
| AGGGCACATATCCAGAACTT+AGG | 0.539483 | 4_3:+66356197 | Msa0656970:CDS |
| GCCGATCCAAAATTAGGTCT+AGG | 0.539538 | 4_3:-66355773 | None:intergenic |
| TCACCTTTATAATATATGGA+AGG | 0.541694 | 4_3:-66357084 | None:intergenic |
| GACCAAAGCCTCAGGCGACA+TGG | 0.546964 | 4_3:-66356374 | None:intergenic |
| AGCGGCACTATATATTCTGA+TGG | 0.548275 | 4_3:+66357014 | Msa0656970:exon |
| AAGACAAGGACCAAAGCCTC+AGG | 0.548439 | 4_3:-66356382 | None:intergenic |
| ATATTCCTCCCCGGCAAAGA+GGG | 0.551581 | 4_3:-66356093 | None:intergenic |
| ACAGAATTGGTCAAGACAGT+TGG | 0.553443 | 4_3:-66355930 | None:intergenic |
| TATATAGTGCCGCTCATGGT+AGG | 0.554276 | 4_3:-66357005 | None:intergenic |
| TACTAGGTGTCCTATTTGCA+TGG | 0.556087 | 4_3:+66355820 | Msa0656970:CDS |
| ACTTCTGTTGGTCGAACAGA+AGG | 0.556174 | 4_3:-66356241 | None:intergenic |
| TCAGATCTTCTGTCATGTGA+TGG | 0.556270 | 4_3:-66356649 | None:intergenic |
| TGCGTTGGCGCAATCAAGGA+TGG | 0.556290 | 4_3:+66356968 | Msa0656970:CDS |
| ATCTGCCCTCTTTGCCGGGG+AGG | 0.556924 | 4_3:+66356088 | Msa0656970:CDS |
| CATCAAACCGTATGGCCAGA+TGG | 0.560005 | 4_3:+66356767 | Msa0656970:CDS |
| ATTATAGAGAGGTGATCCCC+AGG | 0.561387 | 4_3:+66356845 | Msa0656970:CDS |
| AAGACCTAGAATGCCAGTAC+AGG | 0.568320 | 4_3:+66356459 | Msa0656970:CDS |
| TTCCTGGTAGTCATTTGCGT+TGG | 0.569500 | 4_3:+66356953 | Msa0656970:CDS |
| TCTGAGACGTGTGAGTTCCA+GGG | 0.570045 | 4_3:+66356178 | Msa0656970:CDS |
| CTCAATACACATGCCAGCAA+CGG | 0.571505 | 4_3:+66356504 | Msa0656970:CDS |
| GATCCACTGCAATCTATAGA+CGG | 0.572827 | 4_3:-66355713 | None:intergenic |
| ACACATGCCAGCAACGGCAT+TGG | 0.573673 | 4_3:+66356510 | Msa0656970:CDS |
| AATATATGGATATATGGTAT+CGG | 0.574652 | 4_3:+66356111 | Msa0656970:CDS |
| TGAGAGACTGTTCTTGTGAG+AGG | 0.578777 | 4_3:-66355998 | None:intergenic |
| CTGGGAACCCCTCCCAATGT+GGG | 0.579374 | 4_3:+66356044 | Msa0656970:CDS |
| GAAGATCTGAAACTATGCAC+AGG | 0.579647 | 4_3:+66356662 | Msa0656970:CDS |
| AGAATATATAGTGCCGCTCA+TGG | 0.581117 | 4_3:-66357009 | None:intergenic |
| GCTTAGGATGGAACAGGAGA+GGG | 0.582897 | 4_3:+66356288 | Msa0656970:CDS |
| TCAGTATGACTGGCTTAGGA+TGG | 0.586046 | 4_3:+66356276 | Msa0656970:CDS |
| TATATTCCTCCCCGGCAAAG+AGG | 0.588855 | 4_3:-66356094 | None:intergenic |
| CCTGGGAACCCCTCCCAATG+TGG | 0.594503 | 4_3:+66356043 | Msa0656970:CDS |
| TCTGTTATCATCAAACCGTA+TGG | 0.599538 | 4_3:+66356759 | Msa0656970:CDS |
| AGTAAATTTCACGCAAGACA+AGG | 0.602544 | 4_3:-66356396 | None:intergenic |
| AGCCAGTCATACTGACGTGA+CGG | 0.602653 | 4_3:-66356268 | None:intergenic |
| AAGTTCCTCATACTAATCCC+CGG | 0.610437 | 4_3:+66356905 | Msa0656970:CDS |
| GGAAAGCTCAGTCAGAGCCT+GGG | 0.610751 | 4_3:+66356026 | Msa0656970:CDS |
| TATATCCATATATTCCTCCC+CGG | 0.613171 | 4_3:-66356102 | None:intergenic |
| GAATGCCAGTACAGGACGAA+TGG | 0.613508 | 4_3:+66356467 | Msa0656970:CDS |
| AAAATGCCAAAAGTTAGAAG+AGG | 0.615473 | 4_3:+66355683 | Msa0656970:CDS |
| TCAGTGTCCTCTTCAACAGA+GGG | 0.619430 | 4_3:-66356583 | None:intergenic |
| CTTATCTGCCCTCTTTGCCG+GGG | 0.619909 | 4_3:+66356085 | Msa0656970:CDS |
| AAATGCCAAAAGTTAGAAGA+GGG | 0.621615 | 4_3:+66355684 | Msa0656970:CDS |
| GGCTTAGGATGGAACAGGAG+AGG | 0.624851 | 4_3:+66356287 | Msa0656970:CDS |
| TGGTATTGCACATGTAAGGT+CGG | 0.627971 | 4_3:-66355895 | None:intergenic |
| TATTGTCTGAAACAATACAC+AGG | 0.629983 | 4_3:+66356536 | Msa0656970:CDS |
| CGTGACGGATCTACTTCTGT+TGG | 0.634856 | 4_3:-66356253 | None:intergenic |
| AGAAGACTCCATGTCGCCTG+AGG | 0.636611 | 4_3:+66356366 | Msa0656970:CDS |
| TCCCCGTCTATAGATTGCAG+TGG | 0.644333 | 4_3:+66355710 | Msa0656970:CDS |
| TTCTCAACAATCTGACTGTG+AGG | 0.645033 | 4_3:-66356820 | None:intergenic |
| TGGTATCGGAACCTGCTCGA+AGG | 0.647070 | 4_3:+66356125 | Msa0656970:CDS |
| TTGAAGATGTTCTGACCCTG+GGG | 0.655818 | 4_3:-66356861 | None:intergenic |
| TTATAGAGAGGTGATCCCCA+GGG | 0.655993 | 4_3:+66356846 | Msa0656970:CDS |
| ATTCGATAGCCTACCATGAG+CGG | 0.673791 | 4_3:+66356996 | Msa0656970:exon |
| GACGAAGAATTGTTGCTCCG+GGG | 0.676645 | 4_3:-66356922 | None:intergenic |
| CAAACCGTATGGCCAGATGG+AGG | 0.687172 | 4_3:+66356770 | Msa0656970:CDS |
| TGAGGAACTTGTGAAACTCG+AGG | 0.687477 | 4_3:-66356892 | None:intergenic |
| GGGTCAGAACATCTTCAACA+AGG | 0.687489 | 4_3:+66356866 | Msa0656970:CDS |
| AAGATCTGAAACTATGCACA+GGG | 0.691379 | 4_3:+66356663 | Msa0656970:CDS |
| TCCACTGCAATCTATAGACG+GGG | 0.695910 | 4_3:-66355711 | None:intergenic |
| ACAGGGTATCAAATGATACA+CGG | 0.702872 | 4_3:+66356680 | Msa0656970:CDS |
| ATTGTCTGAAACAATACACA+GGG | 0.727300 | 4_3:+66356537 | Msa0656970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATAAAAAACTTCT+TGG | - | chr4_3:66357059-66357078 | None:intergenic | 10.0% |
| !!! | TTTTTAATTGTTTGTAGATT+TGG | + | chr4_3:66355635-66355654 | Msa0656970:intron | 15.0% |
| !! | AATTTCACCTTTATAATATA+TGG | - | chr4_3:66357091-66357110 | None:intergenic | 15.0% |
| !! | AATATAACTGAACTAAAAGT+AGG | - | chr4_3:66354464-66354483 | None:intergenic | 20.0% |
| !!! | GTTTTATTTCTTTGTACTTT+AGG | + | chr4_3:66354505-66354524 | Msa0656970:intron | 20.0% |
| !!! | TATTCATAAGGATGTATTTT+TGG | + | chr4_3:66354897-66354916 | Msa0656970:intron | 20.0% |
| !! | TTATTTGCAGACAATATTTA+AGG | - | chr4_3:66355151-66355170 | None:intergenic | 20.0% |
| !!! | AAAAGGTTTGTTTATATTTG+AGG | - | chr4_3:66355382-66355401 | None:intergenic | 20.0% |
| !!! | AATGAAAAAGATTGTGTTTT+TGG | - | chr4_3:66355413-66355432 | None:intergenic | 20.0% |
| !! | AAGAGTTATAAGACAAAAAA+GGG | + | chr4_3:66355512-66355531 | Msa0656970:intron | 20.0% |
| !! | AATATATGGATATATGGTAT+CGG | + | chr4_3:66356111-66356130 | Msa0656970:CDS | 20.0% |
| !! | TTTCCTTCCATATATTATAA+AGG | + | chr4_3:66357081-66357100 | Msa0656970:three_prime_UTR | 20.0% |
| !!! | TCCTACATTTTGTTTTTTAA+TGG | + | chr4_3:66357189-66357208 | Msa0656970:three_prime_UTR | 20.0% |
| !! | TCCATTAAAAAACAAAATGT+AGG | - | chr4_3:66357193-66357212 | None:intergenic | 20.0% |
| ! | TTTGTTGCATAACTATTAAC+TGG | - | chr4_3:66354090-66354109 | None:intergenic | 25.0% |
| ! | GTAAGACAATCATATTCAAT+GGG | - | chr4_3:66354136-66354155 | None:intergenic | 25.0% |
| ! | ATTTATACTCTTAACGAATG+AGG | - | chr4_3:66354358-66354377 | None:intergenic | 25.0% |
| !!! | TTCTGTTTTTCATTCTGTTA+TGG | + | chr4_3:66354406-66354425 | Msa0656970:intron | 25.0% |
| ! | AACATAAATACAGAACCAAA+AGG | - | chr4_3:66354988-66355007 | None:intergenic | 25.0% |
| ! | TGTTTGCTTATATTCATTGA+AGG | + | chr4_3:66355031-66355050 | Msa0656970:intron | 25.0% |
| ! | CAAGAGTTATAAGACAAAAA+AGG | + | chr4_3:66355511-66355530 | Msa0656970:intron | 25.0% |
| ! | CACTGTTATTGAATTATGAT+CGG | + | chr4_3:66355590-66355609 | Msa0656970:intron | 25.0% |
| !!! | TTTGTAGATTTGGTTTTAAG+CGG | + | chr4_3:66355645-66355664 | Msa0656970:intron | 25.0% |
| ! | AAATGTTCTTCTTATGAGAA+GGG | + | chr4_3:66355869-66355888 | Msa0656970:CDS | 25.0% |
| ! | GGTATATGAACTGTAAAAAA+AGG | + | chr4_3:66356146-66356165 | Msa0656970:CDS | 25.0% |
| ! | TATGATTTCTCTGATTAGTA+TGG | - | chr4_3:66356720-66356739 | None:intergenic | 25.0% |
| ! | TGTTGAGAATTATTATAGAG+AGG | + | chr4_3:66356834-66356853 | Msa0656970:CDS | 25.0% |
| ! | TCACCTTTATAATATATGGA+AGG | - | chr4_3:66357087-66357106 | None:intergenic | 25.0% |
| ! | ATCATGTAACATCATTTCTT+TGG | + | chr4_3:66357111-66357130 | Msa0656970:three_prime_UTR | 25.0% |
| TTGCATAACTATTAACTGGT+AGG | - | chr4_3:66354086-66354105 | None:intergenic | 30.0% | |
| GGTAAGACAATCATATTCAA+TGG | - | chr4_3:66354137-66354156 | None:intergenic | 30.0% | |
| ! | TGTCAATTCAAACCCTTTTA+AGG | + | chr4_3:66354377-66354396 | Msa0656970:intron | 30.0% |
| ! | GTCAATTCAAACCCTTTTAA+GGG | + | chr4_3:66354378-66354397 | Msa0656970:intron | 30.0% |
| ACAGAACATTACCCTTAAAA+GGG | - | chr4_3:66354392-66354411 | None:intergenic | 30.0% | |
| AACAGAACATTACCCTTAAA+AGG | - | chr4_3:66354393-66354412 | None:intergenic | 30.0% | |
| TTATTAAGTATGCTGATCTC+TGG | + | chr4_3:66354536-66354555 | Msa0656970:intron | 30.0% | |
| !!! | ATTTTTAGTCATTGCAACAG+CGG | + | chr4_3:66354808-66354827 | Msa0656970:intron | 30.0% |
| ATACATCCTTATGAATACCT+AGG | - | chr4_3:66354894-66354913 | None:intergenic | 30.0% | |
| !!! | AGGATGTATTTTTGGTGTTT+AGG | + | chr4_3:66354905-66354924 | Msa0656970:intron | 30.0% |
| !!! | ATGTATTTTTGGTGTTTAGG+AGG | + | chr4_3:66354908-66354927 | Msa0656970:intron | 30.0% |
| ! | TTCTATATAGTTGTGCCTTT+TGG | + | chr4_3:66354970-66354989 | Msa0656970:intron | 30.0% |
| ! | ATACTAGTTCTTGTATTGCA+TGG | + | chr4_3:66355080-66355099 | Msa0656970:intron | 30.0% |
| GAAAACTAAAGTTTCAGACT+TGG | - | chr4_3:66355109-66355128 | None:intergenic | 30.0% | |
| !!! | GAAATTCAGTTTTGAGGTTT+CGG | + | chr4_3:66355196-66355215 | Msa0656970:intron | 30.0% |
| !!! | TGTTTTTGGTGAAGATGAAA+AGG | - | chr4_3:66355399-66355418 | None:intergenic | 30.0% |
| AGTTATAAGACAAAAAAGGG+AGG | + | chr4_3:66355515-66355534 | Msa0656970:intron | 30.0% | |
| GTTATAAGACAAAAAAGGGA+GGG | + | chr4_3:66355516-66355535 | Msa0656970:intron | 30.0% | |
| AAAATGCCAAAAGTTAGAAG+AGG | + | chr4_3:66355683-66355702 | Msa0656970:CDS | 30.0% | |
| AAATGCCAAAAGTTAGAAGA+GGG | + | chr4_3:66355684-66355703 | Msa0656970:CDS | 30.0% | |
| !! | TTTTTGGAGATGAAAGGATA+GGG | - | chr4_3:66355743-66355762 | None:intergenic | 30.0% |
| !! | ATTTTTGGAGATGAAAGGAT+AGG | - | chr4_3:66355744-66355763 | None:intergenic | 30.0% |
| !! | TCAAGATTTTTGGAGATGAA+AGG | - | chr4_3:66355749-66355768 | None:intergenic | 30.0% |
| GAAATGTTCTTCTTATGAGA+AGG | + | chr4_3:66355868-66355887 | Msa0656970:CDS | 30.0% | |
| AACCAAACAACTTACAGAAT+TGG | - | chr4_3:66355946-66355965 | None:intergenic | 30.0% | |
| ! | TATTGTCTGAAACAATACAC+AGG | + | chr4_3:66356536-66356555 | Msa0656970:CDS | 30.0% |
| ! | ATTGTCTGAAACAATACACA+GGG | + | chr4_3:66356537-66356556 | Msa0656970:CDS | 30.0% |
| ! | ATTCTGATGGACAAAATATC+TGG | + | chr4_3:66357027-66357046 | Msa0656970:three_prime_UTR | 30.0% |
| CATCATTTCTTTGGATGATT+TGG | + | chr4_3:66357120-66357139 | Msa0656970:three_prime_UTR | 30.0% | |
| !! | TTTCTTTGGATGATTTGGTT+CGG | + | chr4_3:66357125-66357144 | Msa0656970:three_prime_UTR | 30.0% |
| CAAAGGTTGGATAGAATATA+TGG | - | chr4_3:66357247-66357266 | None:intergenic | 30.0% | |
| !! | TTACCTTTTAGAGAGAGCTT+TGG | + | chr4_3:66354152-66354171 | Msa0656970:intron | 35.0% |
| AATCCAAAGCTCTCTCTAAA+AGG | - | chr4_3:66354158-66354177 | None:intergenic | 35.0% | |
| !! | AGCGGACTTGATATTGATTT+GGG | - | chr4_3:66354313-66354332 | None:intergenic | 35.0% |
| !! | TAGCGGACTTGATATTGATT+TGG | - | chr4_3:66354314-66354333 | None:intergenic | 35.0% |
| TCAATATCAAGTCCGCTATT+AGG | + | chr4_3:66354316-66354335 | Msa0656970:intron | 35.0% | |
| CAATATCAAGTCCGCTATTA+GGG | + | chr4_3:66354317-66354336 | Msa0656970:intron | 35.0% | |
| AATATCAAGTCCGCTATTAG+GGG | + | chr4_3:66354318-66354337 | Msa0656970:intron | 35.0% | |
| !! | TCATTCTGTTATGGTCTTGT+TGG | + | chr4_3:66354415-66354434 | Msa0656970:intron | 35.0% |
| ! | TGTACCGCTATAGTTTTCTA+GGG | + | chr4_3:66354847-66354866 | Msa0656970:intron | 35.0% |
| ATGCTACCTAGGTATTCATA+AGG | + | chr4_3:66354885-66354904 | Msa0656970:intron | 35.0% | |
| CACAAGGTACATAAAACACA+AGG | - | chr4_3:66355177-66355196 | None:intergenic | 35.0% | |
| CCTCAAAACTGAATTTCACA+AGG | - | chr4_3:66355193-66355212 | None:intergenic | 35.0% | |
| ! | CCTTGTGAAATTCAGTTTTG+AGG | + | chr4_3:66355190-66355209 | Msa0656970:intron | 35.0% |
| AGGTTTCGGAATCAATTCTA+TGG | + | chr4_3:66355210-66355229 | Msa0656970:intron | 35.0% | |
| TTCTCGCTTAATGTAATGGT+GGG | - | chr4_3:66355298-66355317 | None:intergenic | 35.0% | |
| TTTCTCGCTTAATGTAATGG+TGG | - | chr4_3:66355299-66355318 | None:intergenic | 35.0% | |
| GCATTTCTCGCTTAATGTAA+TGG | - | chr4_3:66355302-66355321 | None:intergenic | 35.0% | |
| CTGAAAAATACACTTGTGCA+TGG | + | chr4_3:66355321-66355340 | Msa0656970:intron | 35.0% | |
| TCTCACATGCAAAAGCAAAA+TGG | - | chr4_3:66355354-66355373 | None:intergenic | 35.0% | |
| GTGTATTGCTCAGTTGAATT+AGG | + | chr4_3:66355488-66355507 | Msa0656970:intron | 35.0% | |
| ! | AGGGAAATGTCATGGTTTTT+AGG | + | chr4_3:66355535-66355554 | Msa0656970:intron | 35.0% |
| ! | GGGAAATGTCATGGTTTTTA+GGG | + | chr4_3:66355536-66355555 | Msa0656970:intron | 35.0% |
| !! | GGAAATGTCATGGTTTTTAG+GGG | + | chr4_3:66355537-66355556 | Msa0656970:intron | 35.0% |
| !! | GAAATGTCATGGTTTTTAGG+GGG | + | chr4_3:66355538-66355557 | Msa0656970:intron | 35.0% |
| GGCTGATGAAATGAAAGAAT+GGG | + | chr4_3:66355793-66355812 | Msa0656970:CDS | 35.0% | |
| TGAAAGAATGGGATGATACT+AGG | + | chr4_3:66355804-66355823 | Msa0656970:CDS | 35.0% | |
| TGAGGAATTTCCATGCAAAT+AGG | - | chr4_3:66355833-66355852 | None:intergenic | 35.0% | |
| TTCAGAAGAACAGTGTTATG+AGG | - | chr4_3:66355851-66355870 | None:intergenic | 35.0% | |
| TAACTGGTATTGCACATGTA+AGG | - | chr4_3:66355902-66355921 | None:intergenic | 35.0% | |
| GACCAATTCTGTAAGTTGTT+TGG | + | chr4_3:66355941-66355960 | Msa0656970:CDS | 35.0% | |
| TATATCCATATATTCCTCCC+CGG | - | chr4_3:66356105-66356124 | None:intergenic | 35.0% | |
| GGGAGGAATATATGGATATA+TGG | + | chr4_3:66356105-66356124 | Msa0656970:CDS | 35.0% | |
| AGTAAATTTCACGCAAGACA+AGG | - | chr4_3:66356399-66356418 | None:intergenic | 35.0% | |
| CGTGAAATTTACTCTGTTGA+AGG | + | chr4_3:66356406-66356425 | Msa0656970:CDS | 35.0% | |
| ! | AAGATCTGAAACTATGCACA+GGG | + | chr4_3:66356663-66356682 | Msa0656970:CDS | 35.0% |
| ! | ACAGGGTATCAAATGATACA+CGG | + | chr4_3:66356680-66356699 | Msa0656970:CDS | 35.0% |
| AATCAGAGAAATCATAGAGC+TGG | + | chr4_3:66356724-66356743 | Msa0656970:CDS | 35.0% | |
| TCTGTTATCATCAAACCGTA+TGG | + | chr4_3:66356759-66356778 | Msa0656970:CDS | 35.0% | |
| AAATCGTCAACTTCAAAGGT+TGG | - | chr4_3:66357260-66357279 | None:intergenic | 35.0% | |
| TGTCAATCACATCGCTATAG+TGG | + | chr4_3:66354199-66354218 | Msa0656970:intron | 40.0% | |
| GCTACAACCACTATTGTTGA+CGG | - | chr4_3:66354274-66354293 | None:intergenic | 40.0% | |
| !! | GCGGACTTGATATTGATTTG+GGG | - | chr4_3:66354312-66354331 | None:intergenic | 40.0% |
| ! | CTGTACCGCTATAGTTTTCT+AGG | + | chr4_3:66354846-66354865 | Msa0656970:intron | 40.0% |
| ! | GTACCGCTATAGTTTTCTAG+GGG | + | chr4_3:66354848-66354867 | Msa0656970:intron | 40.0% |
| ! | TACCGCTATAGTTTTCTAGG+GGG | + | chr4_3:66354849-66354868 | Msa0656970:intron | 40.0% |
| AAAAAGGGAGGGAAATGTCA+TGG | + | chr4_3:66355527-66355546 | Msa0656970:intron | 40.0% | |
| ATCCACTGCAATCTATAGAC+GGG | - | chr4_3:66355715-66355734 | None:intergenic | 40.0% | |
| GATCCACTGCAATCTATAGA+CGG | - | chr4_3:66355716-66355735 | None:intergenic | 40.0% | |
| ! | TCTAGGCAGGTCAAGATTTT+TGG | - | chr4_3:66355759-66355778 | None:intergenic | 40.0% |
| ATCCAAAATTAGGTCTAGGC+AGG | - | chr4_3:66355772-66355791 | None:intergenic | 40.0% | |
| ! | GCCTAGACCTAATTTTGGAT+CGG | + | chr4_3:66355772-66355791 | Msa0656970:CDS | 40.0% |
| TCATCAGCCGATCCAAAATT+AGG | - | chr4_3:66355782-66355801 | None:intergenic | 40.0% | |
| CGGCTGATGAAATGAAAGAA+TGG | + | chr4_3:66355792-66355811 | Msa0656970:CDS | 40.0% | |
| TACTAGGTGTCCTATTTGCA+TGG | + | chr4_3:66355820-66355839 | Msa0656970:CDS | 40.0% | |
| TGGTATTGCACATGTAAGGT+CGG | - | chr4_3:66355898-66355917 | None:intergenic | 40.0% | |
| ACATGTGCAATACCAGTTAC+AGG | + | chr4_3:66355903-66355922 | Msa0656970:CDS | 40.0% | |
| ACAGAATTGGTCAAGACAGT+TGG | - | chr4_3:66355933-66355952 | None:intergenic | 40.0% | |
| TAATCTCTCATCAGCAATGC+TGG | + | chr4_3:66355967-66355986 | Msa0656970:CDS | 40.0% | |
| CAAGAACAGTCTCTCATGAT+AGG | + | chr4_3:66356005-66356024 | Msa0656970:CDS | 40.0% | |
| ! | ATCAATGCAAGTTCTGATGC+AGG | + | chr4_3:66356334-66356353 | Msa0656970:CDS | 40.0% |
| TCAGATCTTCTGTCATGTGA+TGG | - | chr4_3:66356652-66356671 | None:intergenic | 40.0% | |
| ! | GAAGATCTGAAACTATGCAC+AGG | + | chr4_3:66356662-66356681 | Msa0656970:CDS | 40.0% |
| AATGTTTGATCTCCTCCATC+TGG | - | chr4_3:66356785-66356804 | None:intergenic | 40.0% | |
| GATCAAACATTTCGCCTTCA+AGG | + | chr4_3:66356794-66356813 | Msa0656970:CDS | 40.0% | |
| TTCTCAACAATCTGACTGTG+AGG | - | chr4_3:66356823-66356842 | None:intergenic | 40.0% | |
| AAGTTCCTCATACTAATCCC+CGG | + | chr4_3:66356905-66356924 | Msa0656970:CDS | 40.0% | |
| TAGACGAAGAATTGTTGCTC+CGG | - | chr4_3:66356927-66356946 | None:intergenic | 40.0% | |
| GCAACAATTCTTCGTCTAGA+AGG | + | chr4_3:66356929-66356948 | Msa0656970:CDS | 40.0% | |
| ! | AGAATATATAGTGCCGCTCA+TGG | - | chr4_3:66357012-66357031 | None:intergenic | 40.0% |
| AGCGGCACTATATATTCTGA+TGG | + | chr4_3:66357014-66357033 | Msa0656970:exon | 40.0% | |
| GGCAAAATCGTCAACTTCAA+AGG | - | chr4_3:66357264-66357283 | None:intergenic | 40.0% | |
| ! | GCTATAGTGGAATAGCGTAG+CGG | + | chr4_3:66354212-66354231 | Msa0656970:intron | 45.0% |
| ACAACCACTATTGTTGACGG+TGG | - | chr4_3:66354271-66354290 | None:intergenic | 45.0% | |
| AAGTCCGCTATTAGGGGTTT+GGG | + | chr4_3:66354324-66354343 | Msa0656970:intron | 45.0% | |
| ! | CTGATCTCTGGTGCCAATTT+CGG | + | chr4_3:66354548-66354567 | Msa0656970:intron | 45.0% |
| ! | TGATCTCTGGTGCCAATTTC+GGG | + | chr4_3:66354549-66354568 | Msa0656970:intron | 45.0% |
| !! | GAGCTTGCTCTGGCTTTAAA+CGG | + | chr4_3:66354671-66354690 | Msa0656970:intron | 45.0% |
| !! | AGCTTGCTCTGGCTTTAAAC+GGG | + | chr4_3:66354672-66354691 | Msa0656970:intron | 45.0% |
| TATAGCGGTACAGCGAATAG+CGG | - | chr4_3:66354839-66354858 | None:intergenic | 45.0% | |
| GACCCCCTAGAAAACTATAG+CGG | - | chr4_3:66354854-66354873 | None:intergenic | 45.0% | |
| TGTGCTATGCAATGCTACCT+AGG | + | chr4_3:66354874-66354893 | Msa0656970:intron | 45.0% | |
| TAAGGTCACAAGTGTGTCAG+AGG | - | chr4_3:66355133-66355152 | None:intergenic | 45.0% | |
| ! | CACAAGCGACTTTTCACCTT+CGG | + | chr4_3:66355262-66355281 | Msa0656970:intron | 45.0% |
| GGTGGGATTTATTGATCCGA+AGG | - | chr4_3:66355281-66355300 | None:intergenic | 45.0% | |
| !! | TGTCATGGTTTTTAGGGGGT+TGG | + | chr4_3:66355542-66355561 | Msa0656970:intron | 45.0% |
| ! | GATCGCCCTCTTCTAACTTT+TGG | - | chr4_3:66355692-66355711 | None:intergenic | 45.0% |
| TCCACTGCAATCTATAGACG+GGG | - | chr4_3:66355714-66355733 | None:intergenic | 45.0% | |
| ! | GACCTGCCTAGACCTAATTT+TGG | + | chr4_3:66355767-66355786 | Msa0656970:CDS | 45.0% |
| GCCGATCCAAAATTAGGTCT+AGG | - | chr4_3:66355776-66355795 | None:intergenic | 45.0% | |
| TGAGAGACTGTTCTTGTGAG+AGG | - | chr4_3:66356001-66356020 | None:intergenic | 45.0% | |
| CAAAGAGGGCAGATAAGCTT+TGG | - | chr4_3:66356082-66356101 | None:intergenic | 45.0% | |
| CAGTTCATATACCTTCGAGC+AGG | - | chr4_3:66356139-66356158 | None:intergenic | 45.0% | |
| !! | TAAGTTCTGGATATGTGCCC+TGG | - | chr4_3:66356198-66356217 | None:intergenic | 45.0% |
| AGGGCACATATCCAGAACTT+AGG | + | chr4_3:66356197-66356216 | Msa0656970:CDS | 45.0% | |
| CTAGCATGCTTCCTAAGTTC+TGG | - | chr4_3:66356211-66356230 | None:intergenic | 45.0% | |
| ! | CAGAACTTAGGAAGCATGCT+AGG | + | chr4_3:66356209-66356228 | Msa0656970:CDS | 45.0% |
| ACTTCTGTTGGTCGAACAGA+AGG | - | chr4_3:66356244-66356263 | None:intergenic | 45.0% | |
| !! | TCAGTATGACTGGCTTAGGA+TGG | + | chr4_3:66356276-66356295 | Msa0656970:CDS | 45.0% |
| AAGACCTAGAATGCCAGTAC+AGG | + | chr4_3:66356459-66356478 | Msa0656970:CDS | 45.0% | |
| CTCAATACACATGCCAGCAA+CGG | + | chr4_3:66356504-66356523 | Msa0656970:CDS | 45.0% | |
| GACAAATCCCTCTGTTGAAG+AGG | + | chr4_3:66356576-66356595 | Msa0656970:CDS | 45.0% | |
| TCAGTGTCCTCTTCAACAGA+GGG | - | chr4_3:66356586-66356605 | None:intergenic | 45.0% | |
| CTGTCATGTGATGGCATTCT+AGG | - | chr4_3:66356643-66356662 | None:intergenic | 45.0% | |
| ATTATAGAGAGGTGATCCCC+AGG | + | chr4_3:66356845-66356864 | Msa0656970:CDS | 45.0% | |
| TTATAGAGAGGTGATCCCCA+GGG | + | chr4_3:66356846-66356865 | Msa0656970:CDS | 45.0% | |
| TTGAAGATGTTCTGACCCTG+GGG | - | chr4_3:66356864-66356883 | None:intergenic | 45.0% | |
| GTTGAAGATGTTCTGACCCT+GGG | - | chr4_3:66356865-66356884 | None:intergenic | 45.0% | |
| TGTTGAAGATGTTCTGACCC+TGG | - | chr4_3:66356866-66356885 | None:intergenic | 45.0% | |
| GGGTCAGAACATCTTCAACA+AGG | + | chr4_3:66356866-66356885 | Msa0656970:CDS | 45.0% | |
| TGAGGAACTTGTGAAACTCG+AGG | - | chr4_3:66356895-66356914 | None:intergenic | 45.0% | |
| AGACGAAGAATTGTTGCTCC+GGG | - | chr4_3:66356926-66356945 | None:intergenic | 45.0% | |
| TCTTCGTCTAGAAGGATTCC+TGG | + | chr4_3:66356937-66356956 | Msa0656970:CDS | 45.0% | |
| TTCCTGGTAGTCATTTGCGT+TGG | + | chr4_3:66356953-66356972 | Msa0656970:CDS | 45.0% | |
| ATTCGATAGCCTACCATGAG+CGG | + | chr4_3:66356996-66357015 | Msa0656970:exon | 45.0% | |
| ! | TATATAGTGCCGCTCATGGT+AGG | - | chr4_3:66357008-66357027 | None:intergenic | 45.0% |
| !! | AATAATAATAATAATAATGA+GGG | - | chr4_3:66355459-66355478 | None:intergenic | 5.0% |
| !! | AAATAATAATAATAATAATG+AGG | - | chr4_3:66355460-66355479 | None:intergenic | 5.0% |
| ! | ATAGTGGAATAGCGTAGCGG+TGG | + | chr4_3:66354215-66354234 | Msa0656970:intron | 50.0% |
| GTTGTAGCTGCCGCTAATTG+CGG | + | chr4_3:66354286-66354305 | Msa0656970:intron | 50.0% | |
| ! | TGATTTGGGGCCGCAATTAG+CGG | - | chr4_3:66354299-66354318 | None:intergenic | 50.0% |
| CAAGTCCGCTATTAGGGGTT+TGG | + | chr4_3:66354323-66354342 | Msa0656970:intron | 50.0% | |
| TCGTCCCAAACCCCTAATAG+CGG | - | chr4_3:66354331-66354350 | None:intergenic | 50.0% | |
| ! | GATCTCTGGTGCCAATTTCG+GGG | + | chr4_3:66354550-66354569 | Msa0656970:intron | 50.0% |
| ! | ATTCCCTCCGGTGCCAATTT+CGG | + | chr4_3:66354631-66354650 | Msa0656970:intron | 50.0% |
| TGGACTTAGCCCACCGAAAT+TGG | - | chr4_3:66354647-66354666 | None:intergenic | 50.0% | |
| ! | AGTCCATACAGAGCTTGCTC+TGG | + | chr4_3:66354661-66354680 | Msa0656970:intron | 50.0% |
| AAGCCAGAGCAAGCTCTGTA+TGG | - | chr4_3:66354667-66354686 | None:intergenic | 50.0% | |
| !! | GCTTGCTCTGGCTTTAAACG+GGG | + | chr4_3:66354673-66354692 | Msa0656970:intron | 50.0% |
| AAACTCAATCCGCCCACTTG+CGG | - | chr4_3:66354703-66354722 | None:intergenic | 50.0% | |
| GGTGAAAAGTCGCTTGTGCA+TGG | - | chr4_3:66355260-66355279 | None:intergenic | 50.0% | |
| TCCCCGTCTATAGATTGCAG+TGG | + | chr4_3:66355710-66355729 | Msa0656970:CDS | 50.0% | |
| ! | ACAGTTGGAGTGCCTGTAAC+TGG | - | chr4_3:66355918-66355937 | None:intergenic | 50.0% |
| ! | TTGCAGCTTGCTCCCACATT+GGG | - | chr4_3:66356059-66356078 | None:intergenic | 50.0% |
| AGCTTATCTGCCCTCTTTGC+CGG | + | chr4_3:66356083-66356102 | Msa0656970:CDS | 50.0% | |
| ATATTCCTCCCCGGCAAAGA+GGG | - | chr4_3:66356096-66356115 | None:intergenic | 50.0% | |
| TATATTCCTCCCCGGCAAAG+AGG | - | chr4_3:66356097-66356116 | None:intergenic | 50.0% | |
| CTTTGCCGGGGAGGAATATA+TGG | + | chr4_3:66356097-66356116 | Msa0656970:CDS | 50.0% | |
| !! | TTCTGAGACGTGTGAGTTCC+AGG | + | chr4_3:66356177-66356196 | Msa0656970:CDS | 50.0% |
| ! | TCTGAGACGTGTGAGTTCCA+GGG | + | chr4_3:66356178-66356197 | Msa0656970:CDS | 50.0% |
| ! | ACTTAGGAAGCATGCTAGGC+TGG | + | chr4_3:66356213-66356232 | Msa0656970:CDS | 50.0% |
| !! | CGTGACGGATCTACTTCTGT+TGG | - | chr4_3:66356256-66356275 | None:intergenic | 50.0% |
| ATCCGTCACGTCAGTATGAC+TGG | + | chr4_3:66356266-66356285 | Msa0656970:CDS | 50.0% | |
| AGCCAGTCATACTGACGTGA+CGG | - | chr4_3:66356271-66356290 | None:intergenic | 50.0% | |
| !! | CACGTCAGTATGACTGGCTT+AGG | + | chr4_3:66356272-66356291 | Msa0656970:CDS | 50.0% |
| !! | TGACTGGCTTAGGATGGAAC+AGG | + | chr4_3:66356282-66356301 | Msa0656970:CDS | 50.0% |
| GCTTAGGATGGAACAGGAGA+GGG | + | chr4_3:66356288-66356307 | Msa0656970:CDS | 50.0% | |
| AAGACAAGGACCAAAGCCTC+AGG | - | chr4_3:66356385-66356404 | None:intergenic | 50.0% | |
| CTGTTGAAGGCAACACTGAC+TGG | + | chr4_3:66356419-66356438 | Msa0656970:CDS | 50.0% | |
| ! | TCGTCCTGTACTGGCATTCT+AGG | - | chr4_3:66356466-66356485 | None:intergenic | 50.0% |
| GAATGCCAGTACAGGACGAA+TGG | + | chr4_3:66356467-66356486 | Msa0656970:CDS | 50.0% | |
| TCAGACCATTCGTCCTGTAC+TGG | - | chr4_3:66356475-66356494 | None:intergenic | 50.0% | |
| AATACACCCAATGCCGTTGC+TGG | - | chr4_3:66356520-66356539 | None:intergenic | 50.0% | |
| GTCAGTGTCCTCTTCAACAG+AGG | - | chr4_3:66356587-66356606 | None:intergenic | 50.0% | |
| CTGTTGAAGAGGACACTGAC+TGG | + | chr4_3:66356587-66356606 | Msa0656970:CDS | 50.0% | |
| CATCAAACCGTATGGCCAGA+TGG | + | chr4_3:66356767-66356786 | Msa0656970:CDS | 50.0% | |
| ATCTCCTCCATCTGGCCATA+CGG | - | chr4_3:66356777-66356796 | None:intergenic | 50.0% | |
| ! | TGACTGTGAGGCATCCTTGA+AGG | - | chr4_3:66356811-66356830 | None:intergenic | 50.0% |
| ! | TTGCTCCGGGGATTAGTATG+AGG | - | chr4_3:66356913-66356932 | None:intergenic | 50.0% |
| GACGAAGAATTGTTGCTCCG+GGG | - | chr4_3:66356925-66356944 | None:intergenic | 50.0% | |
| ! | CATTTGCGTTGGCGCAATCA+AGG | + | chr4_3:66356964-66356983 | Msa0656970:CDS | 50.0% |
| TGGAATAGCGTAGCGGTGGT+AGG | + | chr4_3:66354219-66354238 | Msa0656970:intron | 55.0% | |
| GGAATAGCGTAGCGGTGGTA+GGG | + | chr4_3:66354220-66354239 | Msa0656970:intron | 55.0% | |
| CGAGCCACCGTCAACAATAG+TGG | + | chr4_3:66354264-66354283 | Msa0656970:intron | 55.0% | |
| ! | TCTGGTGCCAATTTCGGGGT+TGG | + | chr4_3:66354554-66354573 | Msa0656970:intron | 55.0% |
| !! | CCAATTTCGGGGTTGGCCTA+GGG | + | chr4_3:66354561-66354580 | Msa0656970:intron | 55.0% |
| !! | CAATTTCGGGGTTGGCCTAG+GGG | + | chr4_3:66354562-66354581 | Msa0656970:intron | 55.0% |
| AAGATCCCAAGCCAACCCCT+AGG | - | chr4_3:66354580-66354599 | None:intergenic | 55.0% | |
| !! | TAGGGGTTGGCTTGGGATCT+TGG | + | chr4_3:66354579-66354598 | Msa0656970:intron | 55.0% |
| ! | CTTGGAGTTTGCTCCTCCAG+AGG | + | chr4_3:66354597-66354616 | Msa0656970:intron | 55.0% |
| TTTGCTCCTCCAGAGGTCTC+AGG | + | chr4_3:66354604-66354623 | Msa0656970:intron | 55.0% | |
| ATCGAACCTGAGACCTCTGG+AGG | - | chr4_3:66354613-66354632 | None:intergenic | 55.0% | |
| GGAATCGAACCTGAGACCTC+TGG | - | chr4_3:66354616-66354635 | None:intergenic | 55.0% | |
| GTCTCAGGTTCGATTCCCTC+CGG | + | chr4_3:66354619-66354638 | Msa0656970:intron | 55.0% | |
| TAGCCCACCGAAATTGGCAC+CGG | - | chr4_3:66354641-66354660 | None:intergenic | 55.0% | |
| AACTCAATCCGCCCACTTGC+GGG | - | chr4_3:66354702-66354721 | None:intergenic | 55.0% | |
| AGGAAAGCTCAGTCAGAGCC+TGG | + | chr4_3:66356025-66356044 | Msa0656970:CDS | 55.0% | |
| GGAAAGCTCAGTCAGAGCCT+GGG | + | chr4_3:66356026-66356045 | Msa0656970:CDS | 55.0% | |
| ! | AGCTTGCTCCCACATTGGGA+GGG | - | chr4_3:66356055-66356074 | None:intergenic | 55.0% |
| ! | GTTGCAGCTTGCTCCCACAT+TGG | - | chr4_3:66356060-66356079 | None:intergenic | 55.0% |
| GCTTATCTGCCCTCTTTGCC+GGG | + | chr4_3:66356084-66356103 | Msa0656970:CDS | 55.0% | |
| CTTATCTGCCCTCTTTGCCG+GGG | + | chr4_3:66356085-66356104 | Msa0656970:CDS | 55.0% | |
| ! | TGGTATCGGAACCTGCTCGA+AGG | + | chr4_3:66356125-66356144 | Msa0656970:CDS | 55.0% |
| GGCTTAGGATGGAACAGGAG+AGG | + | chr4_3:66356287-66356306 | Msa0656970:CDS | 55.0% | |
| AGAAGACTCCATGTCGCCTG+AGG | + | chr4_3:66356366-66356385 | Msa0656970:CDS | 55.0% | |
| ACACATGCCAGCAACGGCAT+TGG | + | chr4_3:66356510-66356529 | Msa0656970:CDS | 55.0% | |
| CACATGCCAGCAACGGCATT+GGG | + | chr4_3:66356511-66356530 | Msa0656970:CDS | 55.0% | |
| CAAACCGTATGGCCAGATGG+AGG | + | chr4_3:66356770-66356789 | Msa0656970:CDS | 55.0% | |
| CGCCAACGCAAATGACTACC+AGG | - | chr4_3:66356958-66356977 | None:intergenic | 55.0% | |
| ! | TGCGTTGGCGCAATCAAGGA+TGG | + | chr4_3:66356968-66356987 | Msa0656970:CDS | 55.0% |
| AGCGTAGCGGTGGTAGGGTT+TGG | + | chr4_3:66354225-66354244 | Msa0656970:intron | 60.0% | |
| !! | GCCAATTTCGGGGTTGGCCT+AGG | + | chr4_3:66354560-66354579 | Msa0656970:intron | 60.0% |
| CCCTAGGCCAACCCCGAAAT+TGG | - | chr4_3:66354564-66354583 | None:intergenic | 60.0% | |
| !! | GTTGGCCTAGGGGTTGGCTT+GGG | + | chr4_3:66354572-66354591 | Msa0656970:intron | 60.0% |
| ! | CCACCGAAATTGGCACCGGA+GGG | - | chr4_3:66354637-66354656 | None:intergenic | 60.0% |
| ! | CCTCCGGTGCCAATTTCGGT+GGG | + | chr4_3:66354635-66354654 | Msa0656970:intron | 60.0% |
| ACTCAATCCGCCCACTTGCG+GGG | - | chr4_3:66354701-66354720 | None:intergenic | 60.0% | |
| CTGGGAACCCCTCCCAATGT+GGG | + | chr4_3:66356044-66356063 | Msa0656970:CDS | 60.0% | |
| GCTTGCTCCCACATTGGGAG+GGG | - | chr4_3:66356054-66356073 | None:intergenic | 60.0% | |
| ! | CAGCTTGCTCCCACATTGGG+AGG | - | chr4_3:66356056-66356075 | None:intergenic | 60.0% |
| CTCCATGTCGCCTGAGGCTT+TGG | + | chr4_3:66356372-66356391 | Msa0656970:CDS | 60.0% | |
| GACCAAAGCCTCAGGCGACA+TGG | - | chr4_3:66356377-66356396 | None:intergenic | 60.0% | |
| !! | TTCGGGGTTGGCCTAGGGGT+TGG | + | chr4_3:66354566-66354585 | Msa0656970:intron | 65.0% |
| !! | GGTTGGCCTAGGGGTTGGCT+TGG | + | chr4_3:66354571-66354590 | Msa0656970:intron | 65.0% |
| ! | CCCTCCGGTGCCAATTTCGG+TGG | + | chr4_3:66354634-66354653 | Msa0656970:intron | 65.0% |
| ! | CCCACCGAAATTGGCACCGG+AGG | - | chr4_3:66354638-66354657 | None:intergenic | 65.0% |
| TCAATCCGCCCACTTGCGGG+GGG | - | chr4_3:66354699-66354718 | None:intergenic | 65.0% | |
| CTCAATCCGCCCACTTGCGG+GGG | - | chr4_3:66354700-66354719 | None:intergenic | 65.0% | |
| CCACATTGGGAGGGGTTCCC+AGG | - | chr4_3:66356046-66356065 | None:intergenic | 65.0% | |
| CCTGGGAACCCCTCCCAATG+TGG | + | chr4_3:66356043-66356062 | Msa0656970:CDS | 65.0% | |
| ATCTGCCCTCTTTGCCGGGG+AGG | + | chr4_3:66356088-66356107 | Msa0656970:CDS | 65.0% | |
| TAAACGGGGCCCCCCGCAAG+TGG | + | chr4_3:66354687-66354706 | Msa0656970:intron | 70.0% | |
| AAACGGGGCCCCCCGCAAGT+GGG | + | chr4_3:66354688-66354707 | Msa0656970:intron | 70.0% | |
| ! | CGGGGCCCCCCGCAAGTGGG+CGG | + | chr4_3:66354691-66354710 | Msa0656970:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 66354076 | 66357283 | 66354076 | ID=Msa0656970;Name=Msa0656970 |
| chr4_3 | mRNA | 66354076 | 66357283 | 66354076 | ID=Msa0656970-mRNA-1;Parent=Msa0656970;Name=Msa0656970-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0.5|0.5|1|1|2|269|455 |
| chr4_3 | exon | 66354076 | 66354080 | 66354076 | ID=Msa0656970-mRNA-1:exon:19057;Parent=Msa0656970-mRNA-1 |
| chr4_3 | exon | 66355652 | 66357283 | 66355652 | ID=Msa0656970-mRNA-1:exon:19058;Parent=Msa0656970-mRNA-1 |
| chr4_3 | CDS | 66354076 | 66354080 | 66354076 | ID=Msa0656970-mRNA-1:cds;Parent=Msa0656970-mRNA-1 |
| chr4_3 | CDS | 66355652 | 66357014 | 66355652 | ID=Msa0656970-mRNA-1:cds;Parent=Msa0656970-mRNA-1 |
| chr4_3 | three_prime_UTR | 66357015 | 66357283 | 66357015 | ID=Msa0656970-mRNA-1:three_prime_utr;Parent=Msa0656970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
