Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0659610 | XP_024629243.1 | 93.071 | 534 | 37 | 0 | 1 | 534 | 1 | 534 | 0.0 | 981 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0659610 | sp|Q9LF97|Y3295_ARATH | 65.138 | 545 | 172 | 7 | 2 | 534 | 17 | 555 | 0.0 | 667 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0659610 | G7LFP6 | 93.071 | 534 | 37 | 0 | 1 | 534 | 1 | 534 | 0.0 | 981 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0619500 | Msa0659610 | 0.918546 | 1.363904e-86 | -8.615850e-47 |
Msa0312990 | Msa0659610 | 0.803185 | 3.933582e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0659610 | MtrunA17_Chr8g0384891 | 93.071 | 534 | 37 | 0 | 1 | 534 | 1 | 534 | 0.0 | 981 |
Msa0659610 | MtrunA17_Chr3g0130841 | 71.293 | 526 | 135 | 7 | 11 | 533 | 5 | 517 | 0.0 | 738 |
Msa0659610 | MtrunA17_Chr8g0386311 | 53.347 | 493 | 213 | 8 | 7 | 489 | 3 | 488 | 4.17e-170 | 491 |
Msa0659610 | MtrunA17_Chr3g0132111 | 56.823 | 447 | 184 | 7 | 45 | 486 | 37 | 479 | 1.01e-163 | 475 |
Msa0659610 | MtrunA17_Chr8g0355581 | 85.507 | 69 | 10 | 0 | 40 | 108 | 43 | 111 | 2.94e-31 | 117 |
Msa0659610 | MtrunA17_Chr3g0141651 | 31.818 | 132 | 83 | 3 | 233 | 362 | 79 | 205 | 1.47e-14 | 72.8 |
Msa0659610 | MtrunA17_Chr6g0465921 | 80.556 | 36 | 7 | 0 | 59 | 94 | 38 | 73 | 4.72e-12 | 61.6 |
Msa0659610 | MtrunA17_Chr6g0466131 | 78.378 | 37 | 8 | 0 | 59 | 95 | 7 | 43 | 5.66e-12 | 60.5 |
Msa0659610 | MtrunA17_Chr6g0465971 | 78.378 | 37 | 8 | 0 | 59 | 95 | 7 | 43 | 5.66e-12 | 60.5 |
Msa0659610 | MtrunA17_Chr6g0465861 | 71.429 | 42 | 12 | 0 | 54 | 95 | 23 | 64 | 2.34e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0659610 | AT3G52950.1 | 65.138 | 545 | 172 | 7 | 2 | 534 | 17 | 555 | 0.0 | 667 |
Msa0659610 | AT3G52950.2 | 65.138 | 545 | 172 | 7 | 2 | 534 | 17 | 555 | 0.0 | 667 |
Msa0659610 | AT2G36500.1 | 64.833 | 509 | 163 | 8 | 28 | 534 | 41 | 535 | 0.0 | 638 |
Msa0659610 | AT5G50640.1 | 54.157 | 445 | 195 | 4 | 45 | 486 | 59 | 497 | 7.37e-165 | 479 |
Msa0659610 | AT5G50530.1 | 54.157 | 445 | 195 | 4 | 45 | 486 | 59 | 497 | 7.37e-165 | 479 |
Msa0659610 | AT5G63490.1 | 52.521 | 476 | 217 | 4 | 12 | 485 | 19 | 487 | 1.99e-153 | 450 |
Msa0659610 | AT5G63490.2 | 52.521 | 476 | 217 | 4 | 12 | 485 | 19 | 487 | 1.99e-153 | 450 |
Find 139 sgRNAs with CRISPR-Local
Find 500 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAAACGCTCATTACATTAA+AGG | 0.146254 | 4_3:+70001842 | Msa0659610:three_prime_UTR |
GATGCCAATGCTTTGTTATC+TGG | 0.184149 | 4_3:+69994916 | Msa0659610:CDS |
TCAGGCATTAAAGTTGTATT+TGG | 0.192988 | 4_3:+70001598 | Msa0659610:intron |
GCCAAAGTTATTAGTTAAAA+TGG | 0.202093 | 4_3:+70001950 | Msa0659610:three_prime_UTR |
TAATGTAATGAGCGTTTAAA+AGG | 0.250558 | 4_3:-70001838 | None:intergenic |
GCATATCACTCTATGGGTTT+TGG | 0.262451 | 4_3:+70001046 | Msa0659610:CDS |
TTCTGTAGCTTTATGTTTCT+AGG | 0.274740 | 4_3:+69999469 | Msa0659610:intron |
GAAAGGATATATACTGAAAT+AGG | 0.298141 | 4_3:+70001864 | Msa0659610:three_prime_UTR |
TTAAAGTTGTATTTGGATTT+CGG | 0.301088 | 4_3:+70001605 | Msa0659610:CDS |
AGGAGGAGAAGAAGGTTTGC+TGG | 0.303547 | 4_3:-69994622 | None:intergenic |
AAAGTCTGCATATCACTCTA+TGG | 0.304258 | 4_3:+70001039 | Msa0659610:CDS |
ACTCTCGTTTAGAAGGATTA+AGG | 0.309704 | 4_3:-70002024 | None:intergenic |
CTCCGCTCCAGTATTCTTGC+AGG | 0.312593 | 4_3:+70001695 | Msa0659610:CDS |
AACACTAGATTTCTGTATAC+TGG | 0.317563 | 4_3:-70001666 | None:intergenic |
CACCTGCCTGTTGTGGAAAA+TGG | 0.317793 | 4_3:+69998151 | Msa0659610:CDS |
TTCATTTCCTTTCAAATTTG+AGG | 0.322938 | 4_3:+70001072 | Msa0659610:CDS |
ATGTCCCCTCAGATATAGTT+AGG | 0.323701 | 4_3:-69994834 | None:intergenic |
TATACATACTCTCGTTTAGA+AGG | 0.330141 | 4_3:-70002031 | None:intergenic |
GTATCTAGTGTTGCACAATC+TGG | 0.332767 | 4_3:-70000295 | None:intergenic |
AAACCGCAAAACACATCATT+TGG | 0.344466 | 4_3:-70001765 | None:intergenic |
TTTCTCCTCTAGGTAAATTC+AGG | 0.353716 | 4_3:+69998128 | Msa0659610:intron |
CTCAGATATAGTTAGGGCTT+TGG | 0.355668 | 4_3:-69994827 | None:intergenic |
ATGGTGGTGGCTGGTGGAGG+AGG | 0.358091 | 4_3:+69994434 | Msa0659610:five_prime_UTR |
CGACACGCCGCGCCGCCATT+CGG | 0.369486 | 4_3:-69994876 | None:intergenic |
AACAGCACCTGCAAGAATAC+TGG | 0.371929 | 4_3:-70001702 | None:intergenic |
TTGATGGTGGTGGCTGGTGG+AGG | 0.372735 | 4_3:+69994431 | Msa0659610:five_prime_UTR |
GTATCCGATGTCACAAATAA+AGG | 0.374783 | 4_3:-69995134 | None:intergenic |
TTTAAAAGGCAAAGGAGCTT+AGG | 0.381282 | 4_3:-70001824 | None:intergenic |
GCAATTGCAGCTGCAGTTGA+AGG | 0.387906 | 4_3:+69998256 | Msa0659610:CDS |
GCTGTTATTGTGTCATTGTC+AGG | 0.388446 | 4_3:+69999564 | Msa0659610:CDS |
AGCCTTCTCCATCCTTGATA+TGG | 0.388513 | 4_3:-69998218 | None:intergenic |
TGGTGAAGTCATTGCCATAC+TGG | 0.394195 | 4_3:+69998171 | Msa0659610:CDS |
GATGGAGAAGGCTGCTGAGC+AGG | 0.396925 | 4_3:+69998228 | Msa0659610:CDS |
CGTGAGTATGCCCTGAATCT+TGG | 0.398117 | 4_3:-69999589 | None:intergenic |
GAAGGCGATAGAATTGTTCT+TGG | 0.401351 | 4_3:+70001412 | Msa0659610:CDS |
ATTGTCAGGAACCAAGATTC+AGG | 0.402004 | 4_3:+69999578 | Msa0659610:CDS |
CTATGAGTATCAGAATCTTC+TGG | 0.410265 | 4_3:-70000891 | None:intergenic |
GTACTAGATTGCGGTGTTGT+TGG | 0.419894 | 4_3:-70001641 | None:intergenic |
TATGGCATCATAAAGACATT+TGG | 0.420433 | 4_3:-69998200 | None:intergenic |
TCTGTAGCTTTATGTTTCTA+GGG | 0.424061 | 4_3:+69999470 | Msa0659610:intron |
AGAGAGGAGAAAGAGTTTGA+TGG | 0.428430 | 4_3:+69994415 | Msa0659610:five_prime_UTR |
ACACAACAATGAGAAACGTT+GGG | 0.434030 | 4_3:+70002071 | Msa0659610:three_prime_UTR |
TATCTAGTGTTGCACAATCT+GGG | 0.434760 | 4_3:-70000294 | None:intergenic |
ACATTTGGTAATATCCAGTA+TGG | 0.438515 | 4_3:-69998185 | None:intergenic |
TCGAGGGAAGGAGGAGAAGA+AGG | 0.438901 | 4_3:-69994630 | None:intergenic |
GATTAAGGAGAAAGGATTAC+CGG | 0.442811 | 4_3:-70002009 | None:intergenic |
CCTTAGGTTGAGAGTAGCTC+TGG | 0.453539 | 4_3:+70000801 | Msa0659610:intron |
CAGAAGATTCTGATACTCAT+AGG | 0.453728 | 4_3:+70000892 | Msa0659610:CDS |
CGAGTTGACTCTAGTGGAAA+AGG | 0.458340 | 4_3:+70000108 | Msa0659610:CDS |
TTCAAATTTGAGGATCTCAA+TGG | 0.458350 | 4_3:+70001082 | Msa0659610:CDS |
TTTAGAAGGATTAAGGAGAA+AGG | 0.468891 | 4_3:-70002017 | None:intergenic |
TTAAAAGGCAAAGGAGCTTA+GGG | 0.469400 | 4_3:-70001823 | None:intergenic |
ATGAAATGAATTAGGTCTGA+TGG | 0.475002 | 4_3:+69994772 | Msa0659610:intron |
CAGCGGGGTAGCAATGCATC+TGG | 0.482648 | 4_3:+69998289 | Msa0659610:CDS |
CAGAGAACGCCCTGCGATTG+TGG | 0.483975 | 4_3:+70001292 | Msa0659610:CDS |
TTTACAAATTCAAATACAAT+CGG | 0.486377 | 4_3:-69998358 | None:intergenic |
TTTGACACCATTGTCTGATC+CGG | 0.486563 | 4_3:-69995095 | None:intergenic |
GTCTTTATGATGCCATATCA+AGG | 0.492269 | 4_3:+69998206 | Msa0659610:CDS |
GTCAGCTATGCTAGAACTGC+AGG | 0.497273 | 4_3:+70001460 | Msa0659610:CDS |
TTGAAGGCGCAGAACGCCAG+CGG | 0.497855 | 4_3:+69998272 | Msa0659610:CDS |
TATTGATGCTCTTCAAAAGA+TGG | 0.498989 | 4_3:+69995163 | Msa0659610:CDS |
AGCAGAAACAAGATCATTGT+CGG | 0.499187 | 4_3:-70001437 | None:intergenic |
TGAAGGCGCAGAACGCCAGC+GGG | 0.499881 | 4_3:+69998273 | Msa0659610:CDS |
GTCTCTGGCGTAACCGCCGC+CGG | 0.502586 | 4_3:+70001990 | Msa0659610:three_prime_UTR |
GATAGTTACCACAGTTGAAT+CGG | 0.505314 | 4_3:-70001114 | None:intergenic |
AAGAGTTTGATGGTGGTGGC+TGG | 0.506870 | 4_3:+69994425 | Msa0659610:five_prime_UTR |
TTATAGTATGAGGACGATGA+AGG | 0.510197 | 4_3:+70001394 | Msa0659610:intron |
AACTCATGCGGCAATTTCCC+TGG | 0.516393 | 4_3:+70000496 | Msa0659610:CDS |
AAGAAGAAAAGAAAAGAGAG+AGG | 0.521506 | 4_3:+69994399 | Msa0659610:five_prime_UTR |
GTGTAGTAGTCTACCTAAAA+CGG | 0.526760 | 4_3:+70001741 | Msa0659610:CDS |
AGTTTGATGGTGGTGGCTGG+TGG | 0.526997 | 4_3:+69994428 | Msa0659610:five_prime_UTR |
ATGGAGAAGGCTGCTGAGCA+GGG | 0.528674 | 4_3:+69998229 | Msa0659610:CDS |
TACACAACAATGAGAAACGT+TGG | 0.529613 | 4_3:+70002070 | Msa0659610:three_prime_UTR |
TTGAGATCCTCAAATTTGAA+AGG | 0.532138 | 4_3:-70001079 | None:intergenic |
GGAGAAGAAGGTTTGCTGGA+AGG | 0.534164 | 4_3:-69994618 | None:intergenic |
TATTGCCGAGGGTTTGCGAC+CGG | 0.534693 | 4_3:+69995076 | Msa0659610:CDS |
ATAAAACAAACCACAATCGC+AGG | 0.537770 | 4_3:-70001302 | None:intergenic |
AAGAATTACTCGAGGGAAGG+AGG | 0.538608 | 4_3:-69994639 | None:intergenic |
ATTCAGGCACCTGCCTGTTG+TGG | 0.542660 | 4_3:+69998144 | Msa0659610:CDS |
TGCTAGAACTGCAGGAGTGA+AGG | 0.544272 | 4_3:+70001468 | Msa0659610:CDS |
GAATCCTTTATTTGTGACAT+CGG | 0.544493 | 4_3:+69995130 | Msa0659610:CDS |
CAAAGCCCTAACTATATCTG+AGG | 0.544935 | 4_3:+69994828 | Msa0659610:CDS |
TTGTCAGGAACCAAGATTCA+GGG | 0.548078 | 4_3:+69999579 | Msa0659610:CDS |
ACATCTTTCATGCAGTTCAA+AGG | 0.548129 | 4_3:+70000048 | Msa0659610:intron |
AGATGCATGTCGCCGAATGG+CGG | 0.553073 | 4_3:+69994864 | Msa0659610:CDS |
CGCTCATTACATTAAAGGAA+AGG | 0.553687 | 4_3:+70001847 | Msa0659610:three_prime_UTR |
CACTACATATGATGCACGAT+GGG | 0.554634 | 4_3:+70000332 | Msa0659610:CDS |
TGGAGAAGGCTGCTGAGCAG+GGG | 0.555488 | 4_3:+69998230 | Msa0659610:CDS |
AAGTCTGCATATCACTCTAT+GGG | 0.560666 | 4_3:+70001040 | Msa0659610:CDS |
GTCTAACGAGGAGGAACAGT+GGG | 0.564817 | 4_3:+69994538 | Msa0659610:CDS |
CTGATCCGGTCGCAAACCCT+CGG | 0.565957 | 4_3:-69995081 | None:intergenic |
GCTGTTGTTGTAACAAGCAT+TGG | 0.567474 | 4_3:+70001719 | Msa0659610:CDS |
TCAGCGCTCATGACCTCGGA+TGG | 0.570520 | 4_3:+70001004 | Msa0659610:CDS |
CAGATGCATTGCTACCCCGC+TGG | 0.572178 | 4_3:-69998288 | None:intergenic |
GAGGAGAAAGAGTTTGATGG+TGG | 0.573987 | 4_3:+69994418 | Msa0659610:five_prime_UTR |
AATTCCAGATAACAAAGCAT+TGG | 0.574940 | 4_3:-69994920 | None:intergenic |
ACAAATTCAAATACAATCGG+TGG | 0.578684 | 4_3:-69998355 | None:intergenic |
TTCAGATGCATGTCGCCGAA+TGG | 0.583678 | 4_3:+69994861 | Msa0659610:CDS |
TGTCCCCTCAGATATAGTTA+GGG | 0.584020 | 4_3:-69994833 | None:intergenic |
GCTCTTCAAAAGATGGTACA+AGG | 0.584139 | 4_3:+69995170 | Msa0659610:CDS |
TTATGATGCCATATCAAGGA+TGG | 0.584285 | 4_3:+69998210 | Msa0659610:CDS |
GCTACTAGAGTTATTGCCGA+GGG | 0.586528 | 4_3:+69995065 | Msa0659610:CDS |
GAGAAAGAGTTTGATGGTGG+TGG | 0.587527 | 4_3:+69994421 | Msa0659610:five_prime_UTR |
AGCTCACGTCTGTCTACCAC+AGG | 0.591472 | 4_3:-70000370 | None:intergenic |
TGTTGTATCTGCTCCATCCG+AGG | 0.594121 | 4_3:-70001017 | None:intergenic |
ATTTGTGACATCGGATACGT+TGG | 0.607982 | 4_3:+69995139 | Msa0659610:CDS |
AAAGCCCTAACTATATCTGA+GGG | 0.609048 | 4_3:+69994829 | Msa0659610:CDS |
TTAGGTCTGATGGAGGTGAA+AGG | 0.611341 | 4_3:+69994782 | Msa0659610:intron |
CTCTGGAGCTGTTAATGATG+TGG | 0.611756 | 4_3:+70000818 | Msa0659610:CDS |
AAAGGACGGTTAAGAAGCTA+CGG | 0.614907 | 4_3:+69994800 | Msa0659610:CDS |
ATCTGGAATTATGACTGACA+AGG | 0.615486 | 4_3:+69994933 | Msa0659610:CDS |
TGCCATATCAAGGATGGAGA+AGG | 0.620501 | 4_3:+69998216 | Msa0659610:CDS |
TGGTGTCAAAAGTAATGACT+CGG | 0.622017 | 4_3:+69995108 | Msa0659610:CDS |
AGTTTCAGCGCTCATGACCT+CGG | 0.625573 | 4_3:+70001000 | Msa0659610:CDS |
CACAACAATGAGAAACGTTG+GGG | 0.627801 | 4_3:+70002072 | Msa0659610:three_prime_UTR |
CATGTCGCCGAATGGCGGCG+CGG | 0.628384 | 4_3:+69994869 | Msa0659610:CDS |
AATGAGCGTTTAAAAGGCAA+AGG | 0.628570 | 4_3:-70001832 | None:intergenic |
GTCTGATGGAGGTGAAAGGA+CGG | 0.633636 | 4_3:+69994786 | Msa0659610:CDS |
GGAGAAAGGATTACCGGCGG+CGG | 0.637593 | 4_3:-70002003 | None:intergenic |
GTTTGCTGGAAGGTTCGCTG+TGG | 0.641107 | 4_3:-69994608 | None:intergenic |
ACAGACAGAGAAAGAGACAG+AGG | 0.645289 | 4_3:-69994494 | None:intergenic |
TTTGCGACCGGATCAGACAA+TGG | 0.653227 | 4_3:+69995088 | Msa0659610:CDS |
GAAATTCTTACATCTTCCTG+TGG | 0.653654 | 4_3:+70000354 | Msa0659610:CDS |
TAAAACAAACCACAATCGCA+GGG | 0.657682 | 4_3:-70001301 | None:intergenic |
TTTCCACTAGAGTCAACTCG+GGG | 0.660746 | 4_3:-70000105 | None:intergenic |
ATACTGGTTGTACTAGATTG+CGG | 0.665901 | 4_3:-70001650 | None:intergenic |
TGAGTATCAGAATCTTCTGG+TGG | 0.666166 | 4_3:-70000888 | None:intergenic |
TGCTACTAGAGTTATTGCCG+AGG | 0.666362 | 4_3:+69995064 | Msa0659610:CDS |
CGCGTGCACCGATTCAACTG+TGG | 0.670918 | 4_3:+70001106 | Msa0659610:CDS |
AAAACATGAACGGTCTAACG+AGG | 0.686040 | 4_3:+69994526 | Msa0659610:exon |
ACATGAACGGTCTAACGAGG+AGG | 0.691673 | 4_3:+69994529 | Msa0659610:exon |
GCACTACATATGATGCACGA+TGG | 0.693308 | 4_3:+70000331 | Msa0659610:CDS |
CACCTGCAAGAATACTGGAG+CGG | 0.693998 | 4_3:-70001697 | None:intergenic |
AAATGAATTAGGTCTGATGG+AGG | 0.697849 | 4_3:+69994775 | Msa0659610:intron |
GGTCTAACGAGGAGGAACAG+TGG | 0.699295 | 4_3:+69994537 | Msa0659610:CDS |
TAAGGAGAAAGGATTACCGG+CGG | 0.734837 | 4_3:-70002006 | None:intergenic |
GAAGGCGCAGAACGCCAGCG+GGG | 0.735602 | 4_3:+69998274 | Msa0659610:CDS |
AAGCCCTAACTATATCTGAG+GGG | 0.744980 | 4_3:+69994830 | Msa0659610:CDS |
TTCCACTAGAGTCAACTCGG+GGG | 0.776990 | 4_3:-70000104 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATATCATTGTTATTATT+GGG | + | chr4_3:69995218-69995237 | Msa0659610:intron | 10.0% |
!! | TGTTATTAATGAAATGAATT+AGG | + | chr4_3:69994764-69994783 | Msa0659610:intron | 15.0% |
!!! | CTTAATATCATTGTTATTAT+TGG | + | chr4_3:69995217-69995236 | Msa0659610:intron | 15.0% |
!! | TGTATTAAATTAATTACGAT+TGG | - | chr4_3:69995328-69995347 | None:intergenic | 15.0% |
!! | AGAAAAATATTGTAATCATT+TGG | + | chr4_3:69995890-69995909 | Msa0659610:intron | 15.0% |
!! | TAAATGATTGAATGATTATT+TGG | - | chr4_3:69997428-69997447 | None:intergenic | 15.0% |
!! | ATACAACAAAATAATTAAGT+GGG | + | chr4_3:69997557-69997576 | Msa0659610:intron | 15.0% |
!! | AAAAACTATAAATGAAAGAA+AGG | - | chr4_3:69997820-69997839 | None:intergenic | 15.0% |
!! | TTTACAAATTCAAATACAAT+CGG | - | chr4_3:69998361-69998380 | None:intergenic | 15.0% |
!! | TATATATTATATATCACTGT+TGG | + | chr4_3:69998469-69998488 | Msa0659610:intron | 15.0% |
!!! | ATTTTTAAAACTGATTTGAA+TGG | + | chr4_3:69999060-69999079 | Msa0659610:intron | 15.0% |
!! | TTTATGTTATTCCATATAAT+GGG | - | chr4_3:69999656-69999675 | None:intergenic | 15.0% |
!! | ATTTATGTTATTCCATATAA+TGG | - | chr4_3:69999657-69999676 | None:intergenic | 15.0% |
!! | AATATATTGTAGAAACAAAA+GGG | - | chr4_3:69999739-69999758 | None:intergenic | 15.0% |
!!! | ATACAATTATGCAAAAATTT+TGG | + | chr4_3:70000844-70000863 | Msa0659610:CDS | 15.0% |
!!! | TACAATTATGCAAAAATTTT+GGG | + | chr4_3:70000845-70000864 | Msa0659610:CDS | 15.0% |
!!! | AATGGTAACTTATATTTTTT+TGG | + | chr4_3:70001968-70001987 | Msa0659610:three_prime_UTR | 15.0% |
!! | TTTGAAAAACAAAACATGAA+CGG | + | chr4_3:69994516-69994535 | Msa0659610:exon | 20.0% |
!! | ATTTAGTTAATTGAATCTAG+AGG | + | chr4_3:69994679-69994698 | Msa0659610:intron | 20.0% |
!! | ACCATTATAATCATATATCA+TGG | + | chr4_3:69995564-69995583 | Msa0659610:intron | 20.0% |
!! | ACCATGATATATGATTATAA+TGG | - | chr4_3:69995568-69995587 | None:intergenic | 20.0% |
!! | CTATTCTTATTAAAGAAGAT+AGG | - | chr4_3:69995731-69995750 | None:intergenic | 20.0% |
!! | AAACAAAATCAATAAAACCA+TGG | - | chr4_3:69996909-69996928 | None:intergenic | 20.0% |
!!! | ATGCCATTTTTTTATTTTGA+GGG | - | chr4_3:69997057-69997076 | None:intergenic | 20.0% |
!!! | AGTTTTCAATAGTTTTTATG+TGG | + | chr4_3:69997486-69997505 | Msa0659610:intron | 20.0% |
!!! | GTTTTCAATAGTTTTTATGT+GGG | + | chr4_3:69997487-69997506 | Msa0659610:intron | 20.0% |
!!! | CACTTAATTATTTTGTTGTA+TGG | - | chr4_3:69997558-69997577 | None:intergenic | 20.0% |
!! | CATACAACAAAATAATTAAG+TGG | + | chr4_3:69997556-69997575 | Msa0659610:intron | 20.0% |
!! | TACAACAAAATAATTAAGTG+GGG | + | chr4_3:69997558-69997577 | Msa0659610:intron | 20.0% |
!! | AAATTAACTGTATCAAGTAA+TGG | - | chr4_3:69997794-69997813 | None:intergenic | 20.0% |
!! | TAAAAAGATATGTATGTATG+TGG | - | chr4_3:69998390-69998409 | None:intergenic | 20.0% |
!!! | TTAAGAGTATACTAAATGAT+AGG | - | chr4_3:69998528-69998547 | None:intergenic | 20.0% |
!!! | AATTTTAATCAAAAAGCGTA+TGG | + | chr4_3:69998574-69998593 | Msa0659610:intron | 20.0% |
!! | AAAACATAATACCAAGTTTA+AGG | - | chr4_3:69998658-69998677 | None:intergenic | 20.0% |
!!! | TTTTTATATCTAAAATGGAC+TGG | + | chr4_3:69998758-69998777 | Msa0659610:intron | 20.0% |
!!! | TTTTATATCTAAAATGGACT+GGG | + | chr4_3:69998759-69998778 | Msa0659610:intron | 20.0% |
!!! | TTTTTGCTTATATTTCATTC+CGG | - | chr4_3:69999294-69999313 | None:intergenic | 20.0% |
!! | CCAATTTCAATATCATTAAA+GGG | - | chr4_3:69999707-69999726 | None:intergenic | 20.0% |
!! | CCTTTAATGATATTGAAATT+GGG | + | chr4_3:69999705-69999724 | Msa0659610:intron | 20.0% |
!! | ATATATTGTAGAAACAAAAG+GGG | - | chr4_3:69999738-69999757 | None:intergenic | 20.0% |
!! | CAATATATTGTAGAAACAAA+AGG | - | chr4_3:69999740-69999759 | None:intergenic | 20.0% |
!!! | CTTTTGTTTCTACAATATAT+TGG | + | chr4_3:69999738-69999757 | Msa0659610:intron | 20.0% |
!!! | TTTTTTTGAAGTAACATAAG+TGG | + | chr4_3:70000142-70000161 | Msa0659610:intron | 20.0% |
!!! | AGCTTCAATTTTATAAAAAG+TGG | - | chr4_3:70000703-70000722 | None:intergenic | 20.0% |
!! | TTCTATGGAATAATTTCATT+TGG | + | chr4_3:70001536-70001555 | Msa0659610:intron | 20.0% |
!! | TTAAAGTTGTATTTGGATTT+CGG | + | chr4_3:70001605-70001624 | Msa0659610:CDS | 20.0% |
!!! | ATATTGAGTCTTTTTTTGTT+TGG | + | chr4_3:70001899-70001918 | Msa0659610:three_prime_UTR | 20.0% |
!!! | TATTGAGTCTTTTTTTGTTT+GGG | + | chr4_3:70001900-70001919 | Msa0659610:three_prime_UTR | 20.0% |
!!! | ACCATTTTAACTAATAACTT+TGG | - | chr4_3:70001954-70001973 | None:intergenic | 20.0% |
! | AAGAAAAAAGAATTACTCGA+GGG | - | chr4_3:69994649-69994668 | None:intergenic | 25.0% |
! | AAAGAAAAAAGAATTACTCG+AGG | - | chr4_3:69994650-69994669 | None:intergenic | 25.0% |
!! | TATGATATTTCTGATATGAC+AGG | + | chr4_3:69995416-69995435 | Msa0659610:intron | 25.0% |
! | ATCGAATAACGATAATAGTT+TGG | + | chr4_3:69995634-69995653 | Msa0659610:intron | 25.0% |
! | CTTTAATAAGAATAGACTCT+AGG | + | chr4_3:69995736-69995755 | Msa0659610:intron | 25.0% |
!! | TTATTTTCAATGAGTTTCTC+AGG | + | chr4_3:69995932-69995951 | Msa0659610:intron | 25.0% |
! | CACTTATGTTATTGAAACAT+TGG | + | chr4_3:69995967-69995986 | Msa0659610:intron | 25.0% |
! | TTAGATAGATCCAATAGAAT+AGG | + | chr4_3:69996034-69996053 | Msa0659610:intron | 25.0% |
! | AATGCCAAAGCTATAAATAA+GGG | + | chr4_3:69996146-69996165 | Msa0659610:intron | 25.0% |
!!! | GTTTGTTATGAACAACTTTT+TGG | - | chr4_3:69996344-69996363 | None:intergenic | 25.0% |
!!! | TCTTTTTTGGTGAAAAAAGA+GGG | - | chr4_3:69996725-69996744 | None:intergenic | 25.0% |
!!! | TTCTTTTTTGGTGAAAAAAG+AGG | - | chr4_3:69996726-69996745 | None:intergenic | 25.0% |
!!! | GCTATTCTTTCTTTCTTTTT+TGG | - | chr4_3:69996738-69996757 | None:intergenic | 25.0% |
!! | TTGTCTTATTGTCTATTCTT+TGG | + | chr4_3:69996865-69996884 | Msa0659610:intron | 25.0% |
! | TTGCCCTCAAAATAAAAAAA+TGG | + | chr4_3:69997051-69997070 | Msa0659610:intron | 25.0% |
!!! | GATGCCATTTTTTTATTTTG+AGG | - | chr4_3:69997058-69997077 | None:intergenic | 25.0% |
! | AAGGATCCAAAAATTTCAAA+TGG | + | chr4_3:69997149-69997168 | Msa0659610:intron | 25.0% |
! | ATCCAAAAATTTCAAATGGT+GGG | + | chr4_3:69997153-69997172 | Msa0659610:intron | 25.0% |
! | TAAAATATAAAGACACGTAG+AGG | - | chr4_3:69997346-69997365 | None:intergenic | 25.0% |
! | AATCAAATACACAATGGTAT+GGG | - | chr4_3:69997454-69997473 | None:intergenic | 25.0% |
! | AAATCAAATACACAATGGTA+TGG | - | chr4_3:69997455-69997474 | None:intergenic | 25.0% |
! | ACAACAAAATAATTAAGTGG+GGG | + | chr4_3:69997559-69997578 | Msa0659610:intron | 25.0% |
! | TGCATGTAGTATTAATTAGA+GGG | - | chr4_3:69997730-69997749 | None:intergenic | 25.0% |
! | ATGCATGTAGTATTAATTAG+AGG | - | chr4_3:69997731-69997750 | None:intergenic | 25.0% |
! | TTTAAATAATGATGCCTGAT+GGG | + | chr4_3:69998003-69998022 | Msa0659610:intron | 25.0% |
! | GGTTAATTATTCCTTAAACT+TGG | + | chr4_3:69998644-69998663 | Msa0659610:intron | 25.0% |
!! | AACTTGGTATTATGTTTTCT+CGG | + | chr4_3:69998660-69998679 | Msa0659610:intron | 25.0% |
! | TAATTTATATTGTTGCTCTG+AGG | + | chr4_3:69998725-69998744 | Msa0659610:intron | 25.0% |
! | TTTAATCTTAATTCCTAAGC+TGG | - | chr4_3:69999006-69999025 | None:intergenic | 25.0% |
! | TTAGCATCATTACAATATGA+AGG | - | chr4_3:69999125-69999144 | None:intergenic | 25.0% |
! | CTATTAGAATTCCCATTATA+TGG | + | chr4_3:69999642-69999661 | Msa0659610:intron | 25.0% |
! | TTAAAGGGAAATATGATCTA+AGG | - | chr4_3:69999692-69999711 | None:intergenic | 25.0% |
! | CCCTTTAATGATATTGAAAT+TGG | + | chr4_3:69999704-69999723 | Msa0659610:intron | 25.0% |
! | CCCAATTTCAATATCATTAA+AGG | - | chr4_3:69999708-69999727 | None:intergenic | 25.0% |
! | ATTTATTGTAAAGGTAAGGA+AGG | - | chr4_3:69999854-69999873 | None:intergenic | 25.0% |
! | AATATCAAGCAAAAACAAGA+AGG | - | chr4_3:70000214-70000233 | None:intergenic | 25.0% |
! | ACAGTGTTATGTATTATGTA+TGG | + | chr4_3:70000591-70000610 | Msa0659610:intron | 25.0% |
!! | TATCAACTTTTACTAGAAAG+AGG | - | chr4_3:70000752-70000771 | None:intergenic | 25.0% |
! | ACATCTTAGTAATCAGAAAT+TGG | - | chr4_3:70000780-70000799 | None:intergenic | 25.0% |
! | TTCATTTCCTTTCAAATTTG+AGG | + | chr4_3:70001072-70001091 | Msa0659610:CDS | 25.0% |
!!! | TTCCTCATTTTTATAGTATG+AGG | + | chr4_3:70001384-70001403 | Msa0659610:intron | 25.0% |
! | TGTTGTAATCTTTGTATTTC+AGG | + | chr4_3:70001580-70001599 | Msa0659610:intron | 25.0% |
! | TAATGTAATGAGCGTTTAAA+AGG | - | chr4_3:70001841-70001860 | None:intergenic | 25.0% |
! | TTAAACGCTCATTACATTAA+AGG | + | chr4_3:70001842-70001861 | Msa0659610:three_prime_UTR | 25.0% |
! | GAAAGGATATATACTGAAAT+AGG | + | chr4_3:70001864-70001883 | Msa0659610:three_prime_UTR | 25.0% |
!!! | ATTGAGTCTTTTTTTGTTTG+GGG | + | chr4_3:70001901-70001920 | Msa0659610:three_prime_UTR | 25.0% |
! | GCCAAAGTTATTAGTTAAAA+TGG | + | chr4_3:70001950-70001969 | Msa0659610:three_prime_UTR | 25.0% |
!!! | ACTTATATTTTTTTGGTCTC+TGG | + | chr4_3:70001975-70001994 | Msa0659610:three_prime_UTR | 25.0% |
AAGAAGAAAAGAAAAGAGAG+AGG | + | chr4_3:69994399-69994418 | Msa0659610:five_prime_UTR | 30.0% | |
ATGTCCAAAAAGTTCGAAAA+TGG | + | chr4_3:69994582-69994601 | Msa0659610:CDS | 30.0% | |
! | GATTCCATTTTCGAACTTTT+TGG | - | chr4_3:69994589-69994608 | None:intergenic | 30.0% |
ATGAAATGAATTAGGTCTGA+TGG | + | chr4_3:69994772-69994791 | Msa0659610:intron | 30.0% | |
AATTCCAGATAACAAAGCAT+TGG | - | chr4_3:69994923-69994942 | None:intergenic | 30.0% | |
! | GAATCCTTTATTTGTGACAT+CGG | + | chr4_3:69995130-69995149 | Msa0659610:CDS | 30.0% |
TATTGATGCTCTTCAAAAGA+TGG | + | chr4_3:69995163-69995182 | Msa0659610:CDS | 30.0% | |
! | CATTGTTATTATTGGGAACT+AGG | + | chr4_3:69995225-69995244 | Msa0659610:intron | 30.0% |
!!! | GTTCTAAGTAGTTTTTTGCT+TGG | + | chr4_3:69995277-69995296 | Msa0659610:intron | 30.0% |
! | AATAAGAATAGACTCTAGGA+AGG | + | chr4_3:69995740-69995759 | Msa0659610:intron | 30.0% |
!!! | TTTTTTCTGCGATATCTTGT+AGG | + | chr4_3:69995793-69995812 | Msa0659610:intron | 30.0% |
TCAATAACATAAGTGACAAC+AGG | - | chr4_3:69995962-69995981 | None:intergenic | 30.0% | |
GAATGCCAAAGCTATAAATA+AGG | + | chr4_3:69996145-69996164 | Msa0659610:intron | 30.0% | |
AATGCCAAGGCTATAAATAA+GGG | + | chr4_3:69996209-69996228 | Msa0659610:intron | 30.0% | |
CTTGAGAAGAGTTTATAAAG+AGG | - | chr4_3:69996476-69996495 | None:intergenic | 30.0% | |
TGCTAACACAATAATAGGTA+GGG | + | chr4_3:69996686-69996705 | Msa0659610:intron | 30.0% | |
TAATTATCACCCTACCTATT+CGG | - | chr4_3:69996760-69996779 | None:intergenic | 30.0% | |
!!! | GTCTATTCTTTGGTTTTTCT+TGG | + | chr4_3:69996875-69996894 | Msa0659610:intron | 30.0% |
!!! | TTTTCTTGGTTCTATATCCA+TGG | + | chr4_3:69996889-69996908 | Msa0659610:intron | 30.0% |
!!! | TTATTTTGAGGGCAATAACA+TGG | - | chr4_3:69997046-69997065 | None:intergenic | 30.0% |
AAACAAAACTTGTACCTTTC+TGG | + | chr4_3:69997091-69997110 | Msa0659610:intron | 30.0% | |
! | TGTACCTTTCTGGTATTTAA+AGG | + | chr4_3:69997101-69997120 | Msa0659610:intron | 30.0% |
! | TTAGCCTTTAAATACCAGAA+AGG | - | chr4_3:69997108-69997127 | None:intergenic | 30.0% |
GTATTTAAAGGCTAAAGCTA+TGG | + | chr4_3:69997113-69997132 | Msa0659610:intron | 30.0% | |
!! | AAATTTTTGGATCCTTCACT+TGG | - | chr4_3:69997145-69997164 | None:intergenic | 30.0% |
GATCCAAAAATTTCAAATGG+TGG | + | chr4_3:69997152-69997171 | Msa0659610:intron | 30.0% | |
TCCAAAAATTTCAAATGGTG+GGG | + | chr4_3:69997154-69997173 | Msa0659610:intron | 30.0% | |
GTGAGAAATCAAATACACAA+TGG | - | chr4_3:69997460-69997479 | None:intergenic | 30.0% | |
! | TATTAATTAGAGGGTACAGT+CGG | - | chr4_3:69997721-69997740 | None:intergenic | 30.0% |
! | AGAAATGTGTCATTCTAAGA+CGG | + | chr4_3:69997872-69997891 | Msa0659610:intron | 30.0% |
AAACAGACATAGTAAGAAAC+AGG | - | chr4_3:69997982-69998001 | None:intergenic | 30.0% | |
CTTTAAATAATGATGCCTGA+TGG | + | chr4_3:69998002-69998021 | Msa0659610:intron | 30.0% | |
TTAAATAATGATGCCTGATG+GGG | + | chr4_3:69998004-69998023 | Msa0659610:intron | 30.0% | |
ATCTTTACAAGATGCAAACA+CGG | - | chr4_3:69998059-69998078 | None:intergenic | 30.0% | |
ACAGATTATAACTCGCTTAA+TGG | - | chr4_3:69998102-69998121 | None:intergenic | 30.0% | |
!!! | CTGTTTTTTTTTTCTCCTCT+AGG | + | chr4_3:69998118-69998137 | Msa0659610:intron | 30.0% |
! | ACATTTGGTAATATCCAGTA+TGG | - | chr4_3:69998188-69998207 | None:intergenic | 30.0% |
TATGGCATCATAAAGACATT+TGG | - | chr4_3:69998203-69998222 | None:intergenic | 30.0% | |
ACAAATTCAAATACAATCGG+TGG | - | chr4_3:69998358-69998377 | None:intergenic | 30.0% | |
ATTAACCTCAAGTGATTGAT+TGG | - | chr4_3:69998631-69998650 | None:intergenic | 30.0% | |
AAAATCACAGATCACATTTG+AGG | - | chr4_3:69998690-69998709 | None:intergenic | 30.0% | |
! | ACTTTAGTGCTTAACTTGAA+AGG | + | chr4_3:69998817-69998836 | Msa0659610:intron | 30.0% |
! | AATGTGTCTAACAAAGCATT+TGG | - | chr4_3:69999182-69999201 | None:intergenic | 30.0% |
GTACACAACAAAATACAATG+CGG | - | chr4_3:69999266-69999285 | None:intergenic | 30.0% | |
!! | AGTTGAAAAGTTGATGTATG+TGG | + | chr4_3:69999318-69999337 | Msa0659610:intron | 30.0% |
TTGCTTATATTTCATTTCGG+AGG | + | chr4_3:69999384-69999403 | Msa0659610:intron | 30.0% | |
!! | TTCTGTAGCTTTATGTTTCT+AGG | + | chr4_3:69999469-69999488 | Msa0659610:intron | 30.0% |
!! | TCTGTAGCTTTATGTTTCTA+GGG | + | chr4_3:69999470-69999489 | Msa0659610:intron | 30.0% |
!!! | TTTTTTGCAGCTACATATAC+GGG | - | chr4_3:69999519-69999538 | None:intergenic | 30.0% |
!!! | CTTTTTTGCAGCTACATATA+CGG | - | chr4_3:69999520-69999539 | None:intergenic | 30.0% |
AAGGGAAAAGATAAGAACAT+CGG | - | chr4_3:69999938-69999957 | None:intergenic | 30.0% | |
GACAAAAGAGAAAATTAGGA+AGG | - | chr4_3:70000004-70000023 | None:intergenic | 30.0% | |
CAACGACAAAAGAGAAAATT+AGG | - | chr4_3:70000008-70000027 | None:intergenic | 30.0% | |
TGAAAGATGTATAGAACGTT+AGG | - | chr4_3:70000038-70000057 | None:intergenic | 30.0% | |
AAGTAACATAAGTGGAAAGA+AGG | + | chr4_3:70000150-70000169 | Msa0659610:intron | 30.0% | |
! | TTTTGCTTGATATTGAGAAC+TGG | + | chr4_3:70000220-70000239 | Msa0659610:intron | 30.0% |
GCTTACTTTCCTAAATTTGT+TGG | + | chr4_3:70000390-70000409 | Msa0659610:intron | 30.0% | |
TAGAATCTGCCAACAAATTT+AGG | - | chr4_3:70000402-70000421 | None:intergenic | 30.0% | |
! | TATAGATGCATTTTGTAGAC+TGG | + | chr4_3:70000548-70000567 | Msa0659610:intron | 30.0% |
!! | ATTTTGTAGACTGGTTAGAA+TGG | + | chr4_3:70000557-70000576 | Msa0659610:intron | 30.0% |
!! | TTTTGTAGACTGGTTAGAAT+GGG | + | chr4_3:70000558-70000577 | Msa0659610:intron | 30.0% |
GTGCATTTGAAAATGTTCAA+CGG | + | chr4_3:70000613-70000632 | Msa0659610:intron | 30.0% | |
CAAATAATGAAGATGCAAAG+AGG | - | chr4_3:70000665-70000684 | None:intergenic | 30.0% | |
TTCATTATTTGCAATCGTTG+TGG | + | chr4_3:70000674-70000693 | Msa0659610:intron | 30.0% | |
TGATTACTAAGATGTACCTT+AGG | + | chr4_3:70000785-70000804 | Msa0659610:intron | 30.0% | |
ACTGCAATAAAACATTGTAG+AGG | - | chr4_3:70000978-70000997 | None:intergenic | 30.0% | |
TTGAGATCCTCAAATTTGAA+AGG | - | chr4_3:70001082-70001101 | None:intergenic | 30.0% | |
TTCAAATTTGAGGATCTCAA+TGG | + | chr4_3:70001082-70001101 | Msa0659610:CDS | 30.0% | |
!!! | TTTATGTTGCTGTTTTTCGT+AGG | + | chr4_3:70001212-70001231 | Msa0659610:intron | 30.0% |
AAAGACATGTAGTTCTCATA+AGG | - | chr4_3:70001347-70001366 | None:intergenic | 30.0% | |
GTCCTCATACTATAAAAATG+AGG | - | chr4_3:70001389-70001408 | None:intergenic | 30.0% | |
!!! | GCTTTTTCATCTGATGATAT+TGG | + | chr4_3:70001512-70001531 | Msa0659610:intron | 30.0% |
TCAGGCATTAAAGTTGTATT+TGG | + | chr4_3:70001598-70001617 | Msa0659610:intron | 30.0% | |
AACACTAGATTTCTGTATAC+TGG | - | chr4_3:70001669-70001688 | None:intergenic | 30.0% | |
!!! | TTGAGTCTTTTTTTGTTTGG+GGG | + | chr4_3:70001902-70001921 | Msa0659610:three_prime_UTR | 30.0% |
TTTAGAAGGATTAAGGAGAA+AGG | - | chr4_3:70002020-70002039 | None:intergenic | 30.0% | |
TATACATACTCTCGTTTAGA+AGG | - | chr4_3:70002034-70002053 | None:intergenic | 30.0% | |
!!! | CATAGAAGGAGGTTTTTTGT+GGG | - | chr4_3:69994565-69994584 | None:intergenic | 35.0% |
!!! | ACATAGAAGGAGGTTTTTTG+TGG | - | chr4_3:69994566-69994585 | None:intergenic | 35.0% |
! | AACTTTTTGGACATAGAAGG+AGG | - | chr4_3:69994576-69994595 | None:intergenic | 35.0% |
! | TCGAACTTTTTGGACATAGA+AGG | - | chr4_3:69994579-69994598 | None:intergenic | 35.0% |
AAAAAGAATTACTCGAGGGA+AGG | - | chr4_3:69994645-69994664 | None:intergenic | 35.0% | |
AAATGAATTAGGTCTGATGG+AGG | + | chr4_3:69994775-69994794 | Msa0659610:intron | 35.0% | |
AAAGCCCTAACTATATCTGA+GGG | + | chr4_3:69994829-69994848 | Msa0659610:CDS | 35.0% | |
! | ATCTGGAATTATGACTGACA+AGG | + | chr4_3:69994933-69994952 | Msa0659610:CDS | 35.0% |
GAGATGTAATGTGTAATGCA+AGG | + | chr4_3:69995017-69995036 | Msa0659610:intron | 35.0% | |
AGGATGTGTATCTTGTGTTT+AGG | + | chr4_3:69995037-69995056 | Msa0659610:intron | 35.0% | |
! | TGGTGTCAAAAGTAATGACT+CGG | + | chr4_3:69995108-69995127 | Msa0659610:CDS | 35.0% |
GTATCCGATGTCACAAATAA+AGG | - | chr4_3:69995137-69995156 | None:intergenic | 35.0% | |
ACTTTCCTGTATGTGTTCTT+GGG | + | chr4_3:69995369-69995388 | Msa0659610:intron | 35.0% | |
TCTGATATGACAGGACATAT+AGG | + | chr4_3:69995425-69995444 | Msa0659610:intron | 35.0% | |
! | ATGCCTTTAGAAAGTATGCT+GGG | + | chr4_3:69995670-69995689 | Msa0659610:intron | 35.0% |
! | CGTTCCCTTATTTATAGCTT+TGG | - | chr4_3:69996153-69996172 | None:intergenic | 35.0% |
! | GTTAAGTTGTTAGAATGCCA+AGG | + | chr4_3:69996133-69996152 | Msa0659610:intron | 35.0% |
GAATGCCAAGGCTATAAATA+AGG | + | chr4_3:69996208-69996227 | Msa0659610:intron | 35.0% | |
! | CATTCCCTTATTTATAGCCT+TGG | - | chr4_3:69996216-69996235 | None:intergenic | 35.0% |
TTCACTTACCTCCATTTGAA+AGG | + | chr4_3:69996420-69996439 | Msa0659610:intron | 35.0% | |
AGAATCCTATCTATCTGATG+TGG | + | chr4_3:69996494-69996513 | Msa0659610:intron | 35.0% | |
GAATCCTATCTATCTGATGT+GGG | + | chr4_3:69996495-69996514 | Msa0659610:intron | 35.0% | |
CATAATTCGTGACATGGTAT+CGG | - | chr4_3:69996551-69996570 | None:intergenic | 35.0% | |
GATACCATGTCACGAATTAT+GGG | + | chr4_3:69996550-69996569 | Msa0659610:intron | 35.0% | |
CTAACTCATCCTTACAAAAC+CGG | + | chr4_3:69996575-69996594 | Msa0659610:intron | 35.0% | |
CTTGAGAAGAGCTTATAAAG+AGG | - | chr4_3:69996622-69996641 | None:intergenic | 35.0% | |
AGAAACCTATCTATCTGATG+TGG | + | chr4_3:69996640-69996659 | Msa0659610:intron | 35.0% | |
GAAACCTATCTATCTGATGT+GGG | + | chr4_3:69996641-69996660 | Msa0659610:intron | 35.0% | |
TAATCCCACATCAGATAGAT+AGG | - | chr4_3:69996648-69996667 | None:intergenic | 35.0% | |
TTGGCTGCTAACACAATAAT+AGG | + | chr4_3:69996681-69996700 | Msa0659610:intron | 35.0% | |
CTGCTAACACAATAATAGGT+AGG | + | chr4_3:69996685-69996704 | Msa0659610:intron | 35.0% | |
ACAATAATAGGTAGGGTGAT+TGG | + | chr4_3:69996693-69996712 | Msa0659610:intron | 35.0% | |
GAAAGAAAGAATAGCCGAAT+AGG | + | chr4_3:69996743-69996762 | Msa0659610:intron | 35.0% | |
AAAGAATAGCCGAATAGGTA+GGG | + | chr4_3:69996748-69996767 | Msa0659610:intron | 35.0% | |
!! | GATTTTGTTTGTGTGCAATG+TGG | + | chr4_3:69996919-69996938 | Msa0659610:intron | 35.0% |
AATAACATGGAATGGGAAAC+AGG | - | chr4_3:69997033-69997052 | None:intergenic | 35.0% | |
CCAAAAATTTCAAATGGTGG+GGG | + | chr4_3:69997155-69997174 | Msa0659610:intron | 35.0% | |
TATCTTCCACCTTACGTTTA+TGG | + | chr4_3:69997765-69997784 | Msa0659610:intron | 35.0% | |
TAATGGTTGCCATAAACGTA+AGG | - | chr4_3:69997777-69997796 | None:intergenic | 35.0% | |
GACAGAGAAGAAACAGAATA+AGG | - | chr4_3:69997937-69997956 | None:intergenic | 35.0% | |
CATAGTAAGAAACAGGTCAA+AGG | - | chr4_3:69997975-69997994 | None:intergenic | 35.0% | |
TTTCTCCTCTAGGTAAATTC+AGG | + | chr4_3:69998128-69998147 | Msa0659610:intron | 35.0% | |
GTCTTTATGATGCCATATCA+AGG | + | chr4_3:69998206-69998225 | Msa0659610:CDS | 35.0% | |
TTATGATGCCATATCAAGGA+TGG | + | chr4_3:69998210-69998229 | Msa0659610:CDS | 35.0% | |
TACTGTAAGAACCCTCTATT+TGG | + | chr4_3:69998605-69998624 | Msa0659610:intron | 35.0% | |
! | TGATTGATTGGCCAAATAGA+GGG | - | chr4_3:69998619-69998638 | None:intergenic | 35.0% |
TCTCCATTCACATATCTACT+CGG | - | chr4_3:69998863-69998882 | None:intergenic | 35.0% | |
TCTCCATTCACATATCTACT+CGG | - | chr4_3:69998863-69998882 | None:intergenic | 35.0% | |
TCTCCATTCACATATCTACT+CGG | - | chr4_3:69998863-69998882 | None:intergenic | 35.0% | |
CATTGAGAGAGAGAATATTC+AGG | + | chr4_3:69999198-69999217 | Msa0659610:intron | 35.0% | |
!! | CTTCGTATTTTCGCTGATTA+GGG | - | chr4_3:69999237-69999256 | None:intergenic | 35.0% |
!! | ACTTCGTATTTTCGCTGATT+AGG | - | chr4_3:69999238-69999257 | None:intergenic | 35.0% |
TGCTTATATTTCATTCCGGA+GGG | - | chr4_3:69999290-69999309 | None:intergenic | 35.0% | |
TTGCTTATATTTCATTCCGG+AGG | - | chr4_3:69999291-69999310 | None:intergenic | 35.0% | |
AGTTGAAAGGTCAATGTATG+TGG | - | chr4_3:69999357-69999376 | None:intergenic | 35.0% | |
! | TCACGTAAGATTCTTTTCAG+AGG | + | chr4_3:69999607-69999626 | Msa0659610:intron | 35.0% |
AAGGTAAGGAAGGAAAATGA+GGG | - | chr4_3:69999844-69999863 | None:intergenic | 35.0% | |
AAAGGTAAGGAAGGAAAATG+AGG | - | chr4_3:69999845-69999864 | None:intergenic | 35.0% | |
GGGGATTTATTGTAAAGGTA+AGG | - | chr4_3:69999858-69999877 | None:intergenic | 35.0% | |
AGGAAGGGGATTTATTGTAA+AGG | - | chr4_3:69999863-69999882 | None:intergenic | 35.0% | |
TGGATCACGTGGAAAATTAA+GGG | - | chr4_3:69999956-69999975 | None:intergenic | 35.0% | |
TTGGATCACGTGGAAAATTA+AGG | - | chr4_3:69999957-69999976 | None:intergenic | 35.0% | |
ACATCTTTCATGCAGTTCAA+AGG | + | chr4_3:70000048-70000067 | Msa0659610:intron | 35.0% | |
GTCATTACCTAAGTGAGAAA+GGG | - | chr4_3:70000268-70000287 | None:intergenic | 35.0% | |
AGTCATTACCTAAGTGAGAA+AGG | - | chr4_3:70000269-70000288 | None:intergenic | 35.0% | |
TATCTAGTGTTGCACAATCT+GGG | - | chr4_3:70000297-70000316 | None:intergenic | 35.0% | |
GAAATTCTTACATCTTCCTG+TGG | + | chr4_3:70000354-70000373 | Msa0659610:CDS | 35.0% | |
ACTATTATTGTGTCTGCAGA+TGG | + | chr4_3:70000440-70000459 | Msa0659610:intron | 35.0% | |
! | TGTTTTGCAGATAACTCATG+CGG | + | chr4_3:70000484-70000503 | Msa0659610:CDS | 35.0% |
CTATGAGTATCAGAATCTTC+TGG | - | chr4_3:70000894-70000913 | None:intergenic | 35.0% | |
CAGAAGATTCTGATACTCAT+AGG | + | chr4_3:70000892-70000911 | Msa0659610:CDS | 35.0% | |
AAAGTCTGCATATCACTCTA+TGG | + | chr4_3:70001039-70001058 | Msa0659610:CDS | 35.0% | |
AAGTCTGCATATCACTCTAT+GGG | + | chr4_3:70001040-70001059 | Msa0659610:CDS | 35.0% | |
GATAGTTACCACAGTTGAAT+CGG | - | chr4_3:70001117-70001136 | None:intergenic | 35.0% | |
TAAAACAAACCACAATCGCA+GGG | - | chr4_3:70001304-70001323 | None:intergenic | 35.0% | |
ATAAAACAAACCACAATCGC+AGG | - | chr4_3:70001305-70001324 | None:intergenic | 35.0% | |
TTATAGTATGAGGACGATGA+AGG | + | chr4_3:70001394-70001413 | Msa0659610:intron | 35.0% | |
AGCAGAAACAAGATCATTGT+CGG | - | chr4_3:70001440-70001459 | None:intergenic | 35.0% | |
!! | TCTGATGATATTGGCTTCTA+TGG | + | chr4_3:70001521-70001540 | Msa0659610:intron | 35.0% |
! | ATACTGGTTGTACTAGATTG+CGG | - | chr4_3:70001653-70001672 | None:intergenic | 35.0% |
GTGTAGTAGTCTACCTAAAA+CGG | + | chr4_3:70001741-70001760 | Msa0659610:CDS | 35.0% | |
AAACCGCAAAACACATCATT+TGG | - | chr4_3:70001768-70001787 | None:intergenic | 35.0% | |
TTAAAAGGCAAAGGAGCTTA+GGG | - | chr4_3:70001826-70001845 | None:intergenic | 35.0% | |
TTTAAAAGGCAAAGGAGCTT+AGG | - | chr4_3:70001827-70001846 | None:intergenic | 35.0% | |
AATGAGCGTTTAAAAGGCAA+AGG | - | chr4_3:70001835-70001854 | None:intergenic | 35.0% | |
CGCTCATTACATTAAAGGAA+AGG | + | chr4_3:70001847-70001866 | Msa0659610:three_prime_UTR | 35.0% | |
GATTAAGGAGAAAGGATTAC+CGG | - | chr4_3:70002012-70002031 | None:intergenic | 35.0% | |
ACTCTCGTTTAGAAGGATTA+AGG | - | chr4_3:70002027-70002046 | None:intergenic | 35.0% | |
TACACAACAATGAGAAACGT+TGG | + | chr4_3:70002070-70002089 | Msa0659610:three_prime_UTR | 35.0% | |
ACACAACAATGAGAAACGTT+GGG | + | chr4_3:70002071-70002090 | Msa0659610:three_prime_UTR | 35.0% | |
AGAGAGGAGAAAGAGTTTGA+TGG | + | chr4_3:69994415-69994434 | Msa0659610:five_prime_UTR | 40.0% | |
AAAACATGAACGGTCTAACG+AGG | + | chr4_3:69994526-69994545 | Msa0659610:exon | 40.0% | |
AAAGGACGGTTAAGAAGCTA+CGG | + | chr4_3:69994800-69994819 | Msa0659610:CDS | 40.0% | |
CTCAGATATAGTTAGGGCTT+TGG | - | chr4_3:69994830-69994849 | None:intergenic | 40.0% | |
CAAAGCCCTAACTATATCTG+AGG | + | chr4_3:69994828-69994847 | Msa0659610:CDS | 40.0% | |
AAGCCCTAACTATATCTGAG+GGG | + | chr4_3:69994830-69994849 | Msa0659610:CDS | 40.0% | |
TGTCCCCTCAGATATAGTTA+GGG | - | chr4_3:69994836-69994855 | None:intergenic | 40.0% | |
ATGTCCCCTCAGATATAGTT+AGG | - | chr4_3:69994837-69994856 | None:intergenic | 40.0% | |
! | GATGCCAATGCTTTGTTATC+TGG | + | chr4_3:69994916-69994935 | Msa0659610:CDS | 40.0% |
ATGTGTGTTCATTGAGTGTG+TGG | + | chr4_3:69994983-69995002 | Msa0659610:intron | 40.0% | |
TTTGACACCATTGTCTGATC+CGG | - | chr4_3:69995098-69995117 | None:intergenic | 40.0% | |
ATTTGTGACATCGGATACGT+TGG | + | chr4_3:69995139-69995158 | Msa0659610:CDS | 40.0% | |
GCTCTTCAAAAGATGGTACA+AGG | + | chr4_3:69995170-69995189 | Msa0659610:CDS | 40.0% | |
GACTTTCCTGTATGTGTTCT+TGG | + | chr4_3:69995368-69995387 | Msa0659610:intron | 40.0% | |
ATCAACCCAAGAACACATAC+AGG | - | chr4_3:69995377-69995396 | None:intergenic | 40.0% | |
ATGACAGGACATATAGGATG+TGG | + | chr4_3:69995431-69995450 | Msa0659610:intron | 40.0% | |
TAACTCTATTGCTAGATCGC+AGG | - | chr4_3:69995601-69995620 | None:intergenic | 40.0% | |
! | GATGCCTTTAGAAAGTATGC+TGG | + | chr4_3:69995669-69995688 | Msa0659610:intron | 40.0% |
! | TGCCTTTAGAAAGTATGCTG+GGG | + | chr4_3:69995671-69995690 | Msa0659610:intron | 40.0% |
ACAAGATCTCTGTGTGGATT+GGG | + | chr4_3:69995697-69995716 | Msa0659610:intron | 40.0% | |
AACTTGGAACACACTAGAGA+TGG | - | chr4_3:69995825-69995844 | None:intergenic | 40.0% | |
!! | GTGTTCCAAGTTGATCTTGT+CGG | + | chr4_3:69995833-69995852 | Msa0659610:intron | 40.0% |
TTCTACCGACAAGATCAACT+TGG | - | chr4_3:69995841-69995860 | None:intergenic | 40.0% | |
TTTCAATGAGTTTCTCAGGC+AGG | + | chr4_3:69995936-69995955 | Msa0659610:intron | 40.0% | |
TACAGTGTTCCTGAGATCAT+TGG | - | chr4_3:69996008-69996027 | None:intergenic | 40.0% | |
GTAACTTGGGCCTATTCTAT+TGG | - | chr4_3:69996047-69996066 | None:intergenic | 40.0% | |
ATAGGCCCAAGTTACATTAG+AGG | + | chr4_3:69996052-69996071 | Msa0659610:intron | 40.0% | |
CCTCACCTCTAATGTAACTT+GGG | - | chr4_3:69996060-69996079 | None:intergenic | 40.0% | |
ACCTCACCTCTAATGTAACT+TGG | - | chr4_3:69996061-69996080 | None:intergenic | 40.0% | |
! | GTGAGTCATCATGTTCTAGA+AGG | + | chr4_3:69996079-69996098 | Msa0659610:intron | 40.0% |
GGATCTAGAGAGATCCATTA+TGG | + | chr4_3:69996100-69996119 | Msa0659610:intron | 40.0% | |
TAACCAATGACTCGCCATAA+TGG | - | chr4_3:69996117-69996136 | None:intergenic | 40.0% | |
TTCTTTCAGTGTCCTATCTC+AGG | + | chr4_3:69996379-69996398 | Msa0659610:intron | 40.0% | |
TCTTTCAGTGTCCTATCTCA+GGG | + | chr4_3:69996380-69996399 | Msa0659610:intron | 40.0% | |
! | CTCCATTTGAAAGGCATAAC+CGG | + | chr4_3:69996429-69996448 | Msa0659610:intron | 40.0% |
! | AAAGGCATAACCGGCTTATA+AGG | + | chr4_3:69996438-69996457 | Msa0659610:intron | 40.0% |
TAGTCCCACATCAGATAGAT+AGG | - | chr4_3:69996502-69996521 | None:intergenic | 40.0% | |
ATCCACGATAGATCTAGCAT+AGG | + | chr4_3:69996523-69996542 | Msa0659610:intron | 40.0% | |
CGATACCATGTCACGAATTA+TGG | + | chr4_3:69996549-69996568 | Msa0659610:intron | 40.0% | |
!! | CGGTTTTGTAAGGATGAGTT+AGG | - | chr4_3:69996577-69996596 | None:intergenic | 40.0% |
!! | CCTTATAAGCCGGTTTTGTA+AGG | - | chr4_3:69996587-69996606 | None:intergenic | 40.0% |
! | CCTTACAAAACCGGCTTATA+AGG | + | chr4_3:69996584-69996603 | Msa0659610:intron | 40.0% |
GAGAAGAGCTTATAAAGAGG+AGG | - | chr4_3:69996619-69996638 | None:intergenic | 40.0% | |
GAAAGAATAGCCGAATAGGT+AGG | + | chr4_3:69996747-69996766 | Msa0659610:intron | 40.0% | |
TGTCTTCGCTCTTTGTTACA+TGG | + | chr4_3:69996950-69996969 | Msa0659610:intron | 40.0% | |
GTCTTCGCTCTTTGTTACAT+GGG | + | chr4_3:69996951-69996970 | Msa0659610:intron | 40.0% | |
ACTTTATGAGATGTGCTGTC+TGG | + | chr4_3:69996974-69996993 | Msa0659610:intron | 40.0% | |
CTTTATGAGATGTGCTGTCT+GGG | + | chr4_3:69996975-69996994 | Msa0659610:intron | 40.0% | |
TGAGGGCAATAACATGGAAT+GGG | - | chr4_3:69997040-69997059 | None:intergenic | 40.0% | |
TTGAGGGCAATAACATGGAA+TGG | - | chr4_3:69997041-69997060 | None:intergenic | 40.0% | |
!! | CCCCCACCATTTGAAATTTT+TGG | - | chr4_3:69997158-69997177 | None:intergenic | 40.0% |
ATCTGTGTACAATGCATTGG+GGG | - | chr4_3:69997591-69997610 | None:intergenic | 40.0% | |
GATCTGTGTACAATGCATTG+GGG | - | chr4_3:69997592-69997611 | None:intergenic | 40.0% | |
GGATCTGTGTACAATGCATT+GGG | - | chr4_3:69997593-69997612 | None:intergenic | 40.0% | |
!! | AATGTGTCATTCTAAGACGG+AGG | + | chr4_3:69997875-69997894 | Msa0659610:intron | 40.0% |
!! | ATGTGTCATTCTAAGACGGA+GGG | + | chr4_3:69997876-69997895 | Msa0659610:intron | 40.0% |
! | ACTTCACCATTTTCCACAAC+AGG | - | chr4_3:69998160-69998179 | None:intergenic | 40.0% |
! | GTGATTGATTGGCCAAATAG+AGG | - | chr4_3:69998620-69998639 | None:intergenic | 40.0% |
TTTGGCCAATCAATCACTTG+AGG | + | chr4_3:69998623-69998642 | Msa0659610:intron | 40.0% | |
!! | ATCTAAAATGGACTGGGCAA+CGG | + | chr4_3:69998765-69998784 | Msa0659610:intron | 40.0% |
AAGCCGAGTAGATATGTGAA+TGG | + | chr4_3:69998857-69998876 | Msa0659610:intron | 40.0% | |
AAGCCGAGTAGATATGTGAA+TGG | + | chr4_3:69998857-69998876 | Msa0659610:intron | 40.0% | |
AAGCCGAGTAGATATGTGAA+TGG | + | chr4_3:69998857-69998876 | Msa0659610:intron | 40.0% | |
CATTTAAACTCTGCCAGCTT+AGG | + | chr4_3:69998990-69999009 | Msa0659610:intron | 40.0% | |
! | ATTTGGAGCTGACAAAGATG+GGG | - | chr4_3:69999165-69999184 | None:intergenic | 40.0% |
! | CATTTGGAGCTGACAAAGAT+GGG | - | chr4_3:69999166-69999185 | None:intergenic | 40.0% |
!! | ATTTTGTTGTGTACTCCCTC+CGG | + | chr4_3:69999272-69999291 | Msa0659610:intron | 40.0% |
CTGACAGTATAAGCATCATG+TGG | - | chr4_3:69999430-69999449 | None:intergenic | 40.0% | |
TGTAGCTGCAAAAAAGATGC+AGG | + | chr4_3:69999524-69999543 | Msa0659610:CDS | 40.0% | |
! | GCTGTTATTGTGTCATTGTC+AGG | + | chr4_3:69999564-69999583 | Msa0659610:CDS | 40.0% |
ATTGTCAGGAACCAAGATTC+AGG | + | chr4_3:69999578-69999597 | Msa0659610:CDS | 40.0% | |
TTGTCAGGAACCAAGATTCA+GGG | + | chr4_3:69999579-69999598 | Msa0659610:CDS | 40.0% | |
TAAAGAAAGAGAGAAGGGCT+AGG | - | chr4_3:69999819-69999838 | None:intergenic | 40.0% | |
GGGGATAAAGAAAGAGAGAA+GGG | - | chr4_3:69999824-69999843 | None:intergenic | 40.0% | |
AGGGGATAAAGAAAGAGAGA+AGG | - | chr4_3:69999825-69999844 | None:intergenic | 40.0% | |
AGGTAAGGAAGGAAAATGAG+GGG | - | chr4_3:69999843-69999862 | None:intergenic | 40.0% | |
AATGTAACCTCCAATCCACT+TGG | - | chr4_3:69999904-69999923 | None:intergenic | 40.0% | |
! | ATAAGAACATCGGCGTTGAA+CGG | - | chr4_3:69999928-69999947 | None:intergenic | 40.0% |
! | TTTTCCACTAGAGTCAACTC+GGG | - | chr4_3:70000109-70000128 | None:intergenic | 40.0% |
! | CTTTTCCACTAGAGTCAACT+CGG | - | chr4_3:70000110-70000129 | None:intergenic | 40.0% |
GATTCTTCCCTTTCTCACTT+AGG | + | chr4_3:70000258-70000277 | Msa0659610:intron | 40.0% | |
GTATCTAGTGTTGCACAATC+TGG | - | chr4_3:70000298-70000317 | None:intergenic | 40.0% | |
CACTACATATGATGCACGAT+GGG | + | chr4_3:70000332-70000351 | Msa0659610:CDS | 40.0% | |
CTCAAGCATGAAGTTTACCA+GGG | - | chr4_3:70000516-70000535 | None:intergenic | 40.0% | |
TCTCAAGCATGAAGTTTACC+AGG | - | chr4_3:70000517-70000536 | None:intergenic | 40.0% | |
ATGCAAAGAGGAATGTAGTG+AGG | - | chr4_3:70000653-70000672 | None:intergenic | 40.0% | |
TGAGTATCAGAATCTTCTGG+TGG | - | chr4_3:70000891-70000910 | None:intergenic | 40.0% | |
! | GCATATCACTCTATGGGTTT+TGG | + | chr4_3:70001046-70001065 | Msa0659610:CDS | 40.0% |
TTCAACTGTGGTAACTATCC+CGG | + | chr4_3:70001118-70001137 | Msa0659610:intron | 40.0% | |
GAAGGCGATAGAATTGTTCT+TGG | + | chr4_3:70001412-70001431 | Msa0659610:CDS | 40.0% | |
GCTGTTGTTGTAACAAGCAT+TGG | + | chr4_3:70001719-70001738 | Msa0659610:CDS | 40.0% | |
! | CACATCATTTGGACCGTTTT+AGG | - | chr4_3:70001757-70001776 | None:intergenic | 40.0% |
! | GGTCCAAATGATGTGTTTTG+CGG | + | chr4_3:70001762-70001781 | Msa0659610:exon | 40.0% |
! | GATGTGTTTTGCGGTTTAAG+CGG | + | chr4_3:70001771-70001790 | Msa0659610:exon | 40.0% |
! | ATGTGTTTTGCGGTTTAAGC+GGG | + | chr4_3:70001772-70001791 | Msa0659610:exon | 40.0% |
CACAACAATGAGAAACGTTG+GGG | + | chr4_3:70002072-70002091 | Msa0659610:three_prime_UTR | 40.0% | |
GAGGAGAAAGAGTTTGATGG+TGG | + | chr4_3:69994418-69994437 | Msa0659610:five_prime_UTR | 45.0% | |
!! | GAGAAAGAGTTTGATGGTGG+TGG | + | chr4_3:69994421-69994440 | Msa0659610:five_prime_UTR | 45.0% |
ACAGACAGAGAAAGAGACAG+AGG | - | chr4_3:69994497-69994516 | None:intergenic | 45.0% | |
AAGAATTACTCGAGGGAAGG+AGG | - | chr4_3:69994642-69994661 | None:intergenic | 45.0% | |
TTAGGTCTGATGGAGGTGAA+AGG | + | chr4_3:69994782-69994801 | Msa0659610:intron | 45.0% | |
TGCTACTAGAGTTATTGCCG+AGG | + | chr4_3:69995064-69995083 | Msa0659610:CDS | 45.0% | |
GCTACTAGAGTTATTGCCGA+GGG | + | chr4_3:69995065-69995084 | Msa0659610:CDS | 45.0% | |
! | GCCTTTAGAAAGTATGCTGG+GGG | + | chr4_3:69995672-69995691 | Msa0659610:intron | 45.0% |
ACCCCCAGCATACTTTCTAA+AGG | - | chr4_3:69995676-69995695 | None:intergenic | 45.0% | |
GACAAGATCTCTGTGTGGAT+TGG | + | chr4_3:69995696-69995715 | Msa0659610:intron | 45.0% | |
GAGCTTGATCCAATGATCTC+AGG | + | chr4_3:69995996-69996015 | Msa0659610:intron | 45.0% | |
CCCAAGTTACATTAGAGGTG+AGG | + | chr4_3:69996057-69996076 | Msa0659610:intron | 45.0% | |
GATCCATTATGGCGAGTCAT+TGG | + | chr4_3:69996111-69996130 | Msa0659610:intron | 45.0% | |
CGGTTATGCCTTTCAAATGG+AGG | - | chr4_3:69996431-69996450 | None:intergenic | 45.0% | |
AGCCGGTTATGCCTTTCAAA+TGG | - | chr4_3:69996434-69996453 | None:intergenic | 45.0% | |
! | CATAACCGGCTTATAAGGTG+AGG | + | chr4_3:69996443-69996462 | Msa0659610:intron | 45.0% |
AGCCTATGCTAGATCTATCG+TGG | - | chr4_3:69996528-69996547 | None:intergenic | 45.0% | |
AGGTCCCATAATTCGTGACA+TGG | - | chr4_3:69996557-69996576 | None:intergenic | 45.0% | |
! | CAAAACCGGCTTATAAGGTG+TGG | + | chr4_3:69996589-69996608 | Msa0659610:intron | 45.0% |
GGATTAAATCCTCCGAGTGT+TGG | + | chr4_3:69996662-69996681 | Msa0659610:intron | 45.0% | |
TTGTGTTAGCAGCCAACACT+CGG | - | chr4_3:69996677-69996696 | None:intergenic | 45.0% | |
AGCTACTAGTTCAAGCCATG+AGG | - | chr4_3:69996800-69996819 | None:intergenic | 45.0% | |
CTATGGCTTACTCCAAGTGA+AGG | + | chr4_3:69997130-69997149 | Msa0659610:intron | 45.0% | |
CGGATCTGTGTACAATGCAT+TGG | - | chr4_3:69997594-69997613 | None:intergenic | 45.0% | |
! | AATGTGTCACTCGTTGAAGG+TGG | - | chr4_3:69997633-69997652 | None:intergenic | 45.0% |
! | GCAAATGTGTCACTCGTTGA+AGG | - | chr4_3:69997636-69997655 | None:intergenic | 45.0% |
TGGTTGCCATAAACGTAAGG+TGG | - | chr4_3:69997774-69997793 | None:intergenic | 45.0% | |
! | AGAAACAGGTCAAAGGTGCA+AGG | - | chr4_3:69997968-69997987 | None:intergenic | 45.0% |
AGGTGCCTGAATTTACCTAG+AGG | - | chr4_3:69998136-69998155 | None:intergenic | 45.0% | |
TGGTGAAGTCATTGCCATAC+TGG | + | chr4_3:69998171-69998190 | Msa0659610:CDS | 45.0% | |
TGCCATATCAAGGATGGAGA+AGG | + | chr4_3:69998216-69998235 | Msa0659610:CDS | 45.0% | |
AGCCTTCTCCATCCTTGATA+TGG | - | chr4_3:69998221-69998240 | None:intergenic | 45.0% | |
TGTTGGATTCTGCTGCAGTT+TGG | + | chr4_3:69998486-69998505 | Msa0659610:intron | 45.0% | |
!! | TCTAAAATGGACTGGGCAAC+GGG | + | chr4_3:69998766-69998785 | Msa0659610:intron | 45.0% |
! | GCATTTGGAGCTGACAAAGA+TGG | - | chr4_3:69999167-69999186 | None:intergenic | 45.0% |
CTGATTAGGGTTGACAAGGA+AGG | - | chr4_3:69999224-69999243 | None:intergenic | 45.0% | |
! | TTCGCTGATTAGGGTTGACA+AGG | - | chr4_3:69999228-69999247 | None:intergenic | 45.0% |
!! | TAGAGCACCGCTGAATTTCA+AGG | + | chr4_3:69999765-69999784 | Msa0659610:intron | 45.0% |
!! | AGAGCACCGCTGAATTTCAA+GGG | + | chr4_3:69999766-69999785 | Msa0659610:intron | 45.0% |
AGTAGGTATTAGAGACCTGC+AGG | - | chr4_3:69999792-69999811 | None:intergenic | 45.0% | |
GAGAAGGGCTAGGATTAAGT+AGG | - | chr4_3:69999809-69999828 | None:intergenic | 45.0% | |
ATGCGAGGAAAATCAGGAAG+GGG | - | chr4_3:69999877-69999896 | None:intergenic | 45.0% | |
GATGCGAGGAAAATCAGGAA+GGG | - | chr4_3:69999878-69999897 | None:intergenic | 45.0% | |
AGATGCGAGGAAAATCAGGA+AGG | - | chr4_3:69999879-69999898 | None:intergenic | 45.0% | |
! | ATAGAGTGCCAGCATTGAGT+TGG | - | chr4_3:69999976-69999995 | None:intergenic | 45.0% |
TTTCCACTAGAGTCAACTCG+GGG | - | chr4_3:70000108-70000127 | None:intergenic | 45.0% | |
! | CGAGTTGACTCTAGTGGAAA+AGG | + | chr4_3:70000108-70000127 | Msa0659610:CDS | 45.0% |
GCACTACATATGATGCACGA+TGG | + | chr4_3:70000331-70000350 | Msa0659610:CDS | 45.0% | |
!! | CTCTGGAGCTGTTAATGATG+TGG | + | chr4_3:70000818-70000837 | Msa0659610:CDS | 45.0% |
TCTGATACTCATAGGTACGC+TGG | + | chr4_3:70000900-70000919 | Msa0659610:intron | 45.0% | |
TCAACTGTGGTAACTATCCC+GGG | + | chr4_3:70001119-70001138 | Msa0659610:intron | 45.0% | |
TAACTATCCCGGGGGAAAAT+TGG | + | chr4_3:70001129-70001148 | Msa0659610:intron | 45.0% | |
AACTATCCCGGGGGAAAATT+GGG | + | chr4_3:70001130-70001149 | Msa0659610:intron | 45.0% | |
!! | GTACTAGATTGCGGTGTTGT+TGG | - | chr4_3:70001644-70001663 | None:intergenic | 45.0% |
AACAGCACCTGCAAGAATAC+TGG | - | chr4_3:70001705-70001724 | None:intergenic | 45.0% | |
! | TGTGTTTTGCGGTTTAAGCG+GGG | + | chr4_3:70001773-70001792 | Msa0659610:three_prime_UTR | 45.0% |
TAAGGAGAAAGGATTACCGG+CGG | - | chr4_3:70002009-70002028 | None:intergenic | 45.0% | |
!!! | TTTTATGTATATTAAAAATT+AGG | - | chr4_3:69997520-69997539 | None:intergenic | 5.0% |
!!! | ATTTTTTTTTATATCTAAAA+TGG | + | chr4_3:69998753-69998772 | Msa0659610:intron | 5.0% |
!! | AAGAGTTTGATGGTGGTGGC+TGG | + | chr4_3:69994425-69994444 | Msa0659610:five_prime_UTR | 50.0% |
ACATGAACGGTCTAACGAGG+AGG | + | chr4_3:69994529-69994548 | Msa0659610:exon | 50.0% | |
GTCTAACGAGGAGGAACAGT+GGG | + | chr4_3:69994538-69994557 | Msa0659610:CDS | 50.0% | |
!! | GGAGAAGAAGGTTTGCTGGA+AGG | - | chr4_3:69994621-69994640 | None:intergenic | 50.0% |
AGGAGGAGAAGAAGGTTTGC+TGG | - | chr4_3:69994625-69994644 | None:intergenic | 50.0% | |
GTCTGATGGAGGTGAAAGGA+CGG | + | chr4_3:69994786-69994805 | Msa0659610:CDS | 50.0% | |
TTCAGATGCATGTCGCCGAA+TGG | + | chr4_3:69994861-69994880 | Msa0659610:CDS | 50.0% | |
TTTGCGACCGGATCAGACAA+TGG | + | chr4_3:69995088-69995107 | Msa0659610:CDS | 50.0% | |
!! | CTCTGTGTGGATTGGGTTTC+TGG | + | chr4_3:69995704-69995723 | Msa0659610:intron | 50.0% |
TGGAACACACTAGAGATGGC+TGG | - | chr4_3:69995821-69995840 | None:intergenic | 50.0% | |
ACACACACACACCCTGAGAT+AGG | - | chr4_3:69996394-69996413 | None:intergenic | 50.0% | |
GCACTCCTCACCTTATAAGC+CGG | - | chr4_3:69996451-69996470 | None:intergenic | 50.0% | |
GCACTCCACACCTTATAAGC+CGG | - | chr4_3:69996597-69996616 | None:intergenic | 50.0% | |
!! | AGTGTCGTTTCGTCACCTCA+TGG | + | chr4_3:69996782-69996801 | Msa0659610:intron | 50.0% |
TGTCACTCGTTGAAGGTGGA+GGG | - | chr4_3:69997629-69997648 | None:intergenic | 50.0% | |
ATGCCTGATGGGGCAAGAAT+TGG | + | chr4_3:69998014-69998033 | Msa0659610:intron | 50.0% | |
TGCCTGATGGGGCAAGAATT+GGG | + | chr4_3:69998015-69998034 | Msa0659610:intron | 50.0% | |
TTCCCAATTCTTGCCCCATC+AGG | - | chr4_3:69998020-69998039 | None:intergenic | 50.0% | |
CACCTGCCTGTTGTGGAAAA+TGG | + | chr4_3:69998151-69998170 | Msa0659610:CDS | 50.0% | |
! | CACCATTTTCCACAACAGGC+AGG | - | chr4_3:69998156-69998175 | None:intergenic | 50.0% |
GCAATTGCAGCTGCAGTTGA+AGG | + | chr4_3:69998256-69998275 | Msa0659610:CDS | 50.0% | |
CGTGAGTATGCCCTGAATCT+TGG | - | chr4_3:69999592-69999611 | None:intergenic | 50.0% | |
TGCAGGCCCTTGAAATTCAG+CGG | - | chr4_3:69999775-69999794 | None:intergenic | 50.0% | |
!! | CAGCATTGAGTTGGATCACG+TGG | - | chr4_3:69999967-69999986 | None:intergenic | 50.0% |
CACGTGATCCAACTCAATGC+TGG | + | chr4_3:69999965-69999984 | Msa0659610:intron | 50.0% | |
TTCCACTAGAGTCAACTCGG+GGG | - | chr4_3:70000107-70000126 | None:intergenic | 50.0% | |
AACTCATGCGGCAATTTCCC+TGG | + | chr4_3:70000496-70000515 | Msa0659610:CDS | 50.0% | |
CCAGAGCTACTCTCAACCTA+AGG | - | chr4_3:70000804-70000823 | None:intergenic | 50.0% | |
!! | CCTTAGGTTGAGAGTAGCTC+TGG | + | chr4_3:70000801-70000820 | Msa0659610:intron | 50.0% |
AGTTTCAGCGCTCATGACCT+CGG | + | chr4_3:70001000-70001019 | Msa0659610:CDS | 50.0% | |
TGTTGTATCTGCTCCATCCG+AGG | - | chr4_3:70001020-70001039 | None:intergenic | 50.0% | |
CAACTGTGGTAACTATCCCG+GGG | + | chr4_3:70001120-70001139 | Msa0659610:intron | 50.0% | |
AACTGTGGTAACTATCCCGG+GGG | + | chr4_3:70001121-70001140 | Msa0659610:intron | 50.0% | |
GTCAGCTATGCTAGAACTGC+AGG | + | chr4_3:70001460-70001479 | Msa0659610:CDS | 50.0% | |
TGCTAGAACTGCAGGAGTGA+AGG | + | chr4_3:70001468-70001487 | Msa0659610:CDS | 50.0% | |
CACCTGCAAGAATACTGGAG+CGG | - | chr4_3:70001700-70001719 | None:intergenic | 50.0% | |
!! | AGTTTGATGGTGGTGGCTGG+TGG | + | chr4_3:69994428-69994447 | Msa0659610:five_prime_UTR | 55.0% |
GGTCTAACGAGGAGGAACAG+TGG | + | chr4_3:69994537-69994556 | Msa0659610:CDS | 55.0% | |
! | GTTTGCTGGAAGGTTCGCTG+TGG | - | chr4_3:69994611-69994630 | None:intergenic | 55.0% |
TCGAGGGAAGGAGGAGAAGA+AGG | - | chr4_3:69994633-69994652 | None:intergenic | 55.0% | |
AGATGCATGTCGCCGAATGG+CGG | + | chr4_3:69994864-69994883 | Msa0659610:CDS | 55.0% | |
TATTGCCGAGGGTTTGCGAC+CGG | + | chr4_3:69995076-69995095 | Msa0659610:CDS | 55.0% | |
TTGCTAGATCGCAGGCTGTG+TGG | - | chr4_3:69995593-69995612 | None:intergenic | 55.0% | |
GGGGTGACAAGATCTCTGTG+TGG | + | chr4_3:69995691-69995710 | Msa0659610:intron | 55.0% | |
TGTTAGCAGCCAACACTCGG+AGG | - | chr4_3:69996674-69996693 | None:intergenic | 55.0% | |
TGAAGGTGGAGGGAGTAAGC+AGG | - | chr4_3:69997619-69997638 | None:intergenic | 55.0% | |
! | GTGTCACTCGTTGAAGGTGG+AGG | - | chr4_3:69997630-69997649 | None:intergenic | 55.0% |
ATTCAGGCACCTGCCTGTTG+TGG | + | chr4_3:69998144-69998163 | Msa0659610:CDS | 55.0% | |
ATGGAGAAGGCTGCTGAGCA+GGG | + | chr4_3:69998229-69998248 | Msa0659610:CDS | 55.0% | |
GCTGAATTTCAAGGGCCTGC+AGG | + | chr4_3:69999774-69999793 | Msa0659610:intron | 55.0% | |
GGCGAGATGCGAGGAAAATC+AGG | - | chr4_3:69999883-69999902 | None:intergenic | 55.0% | |
TTTCCTCGCATCTCGCCAAG+TGG | + | chr4_3:69999886-69999905 | Msa0659610:intron | 55.0% | |
AATCCACTTGGCGAGATGCG+AGG | - | chr4_3:69999892-69999911 | None:intergenic | 55.0% | |
TCGCATCTCGCCAAGTGGAT+TGG | + | chr4_3:69999891-69999910 | Msa0659610:intron | 55.0% | |
!! | CATCTCGCCAAGTGGATTGG+AGG | + | chr4_3:69999894-69999913 | Msa0659610:intron | 55.0% |
AGCTCACGTCTGTCTACCAC+AGG | - | chr4_3:70000373-70000392 | None:intergenic | 55.0% | |
TATCCCGGGGGAAAATTGGG+AGG | + | chr4_3:70001133-70001152 | Msa0659610:intron | 55.0% | |
! | AGTCCTCCCAATTTTCCCCC+GGG | - | chr4_3:70001139-70001158 | None:intergenic | 55.0% |
! | CAGTCCTCCCAATTTTCCCC+CGG | - | chr4_3:70001140-70001159 | None:intergenic | 55.0% |
GGGGGAAAATTGGGAGGACT+GGG | + | chr4_3:70001139-70001158 | Msa0659610:intron | 55.0% | |
CTCCGCTCCAGTATTCTTGC+AGG | + | chr4_3:70001695-70001714 | Msa0659610:CDS | 55.0% | |
!! | TTGATGGTGGTGGCTGGTGG+AGG | + | chr4_3:69994431-69994450 | Msa0659610:five_prime_UTR | 60.0% |
CTGATCCGGTCGCAAACCCT+CGG | - | chr4_3:69995084-69995103 | None:intergenic | 60.0% | |
GTGGAGGGAGTAAGCAGGCA+CGG | - | chr4_3:69997614-69997633 | None:intergenic | 60.0% | |
GATGGAGAAGGCTGCTGAGC+AGG | + | chr4_3:69998228-69998247 | Msa0659610:CDS | 60.0% | |
TGGAGAAGGCTGCTGAGCAG+GGG | + | chr4_3:69998230-69998249 | Msa0659610:CDS | 60.0% | |
! | TTGAAGGCGCAGAACGCCAG+CGG | + | chr4_3:69998272-69998291 | Msa0659610:CDS | 60.0% |
CAGATGCATTGCTACCCCGC+TGG | - | chr4_3:69998291-69998310 | None:intergenic | 60.0% | |
CAGCGGGGTAGCAATGCATC+TGG | + | chr4_3:69998289-69998308 | Msa0659610:CDS | 60.0% | |
! | CTCCCCCGAGTTGACTCTAG+TGG | + | chr4_3:70000102-70000121 | Msa0659610:CDS | 60.0% |
TCAGCGCTCATGACCTCGGA+TGG | + | chr4_3:70001004-70001023 | Msa0659610:CDS | 60.0% | |
!! | CGCGTGCACCGATTCAACTG+TGG | + | chr4_3:70001106-70001125 | Msa0659610:CDS | 60.0% |
CGGGGGAAAATTGGGAGGAC+TGG | + | chr4_3:70001138-70001157 | Msa0659610:intron | 60.0% | |
CAGAGAACGCCCTGCGATTG+TGG | + | chr4_3:70001292-70001311 | Msa0659610:CDS | 60.0% | |
GGAGAAAGGATTACCGGCGG+CGG | - | chr4_3:70002006-70002025 | None:intergenic | 60.0% | |
!! | ATGGTGGTGGCTGGTGGAGG+AGG | + | chr4_3:69994434-69994453 | Msa0659610:five_prime_UTR | 65.0% |
! | TGAAGGCGCAGAACGCCAGC+GGG | + | chr4_3:69998273-69998292 | Msa0659610:CDS | 65.0% |
CATGTCGCCGAATGGCGGCG+CGG | + | chr4_3:69994869-69994888 | Msa0659610:CDS | 70.0% | |
! | GAAGGCGCAGAACGCCAGCG+GGG | + | chr4_3:69998274-69998293 | Msa0659610:CDS | 70.0% |
GTCTCTGGCGTAACCGCCGC+CGG | + | chr4_3:70001990-70002009 | Msa0659610:three_prime_UTR | 70.0% | |
CGACACGCCGCGCCGCCATT+CGG | - | chr4_3:69994879-69994898 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 69994384 | 70002193 | 69994384 | ID=Msa0659610;Name=Msa0659610 |
chr4_3 | mRNA | 69994384 | 70002193 | 69994384 | ID=Msa0659610-mRNA-1;Parent=Msa0659610;Name=Msa0659610-mRNA-1;_AED=0.10;_eAED=0.11;_QI=147|0.91|0.92|1|0.91|0.84|13|421|534 |
chr4_3 | exon | 69994384 | 69994652 | 69994384 | ID=Msa0659610-mRNA-1:exon:20685;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 69994786 | 69994954 | 69994786 | ID=Msa0659610-mRNA-1:exon:20686;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 69995059 | 69995191 | 69995059 | ID=Msa0659610-mRNA-1:exon:20687;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 69998140 | 69998375 | 69998140 | ID=Msa0659610-mRNA-1:exon:20688;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 69999477 | 69999610 | 69999477 | ID=Msa0659610-mRNA-1:exon:20689;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 70000063 | 70000129 | 70000063 | ID=Msa0659610-mRNA-1:exon:20690;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 70000280 | 70000385 | 70000280 | ID=Msa0659610-mRNA-1:exon:20691;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 70000459 | 70000517 | 70000459 | ID=Msa0659610-mRNA-1:exon:20692;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 70000807 | 70000913 | 70000807 | ID=Msa0659610-mRNA-1:exon:20693;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 70000997 | 70001127 | 70000997 | ID=Msa0659610-mRNA-1:exon:20694;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 70001234 | 70001313 | 70001234 | ID=Msa0659610-mRNA-1:exon:20695;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 70001400 | 70001489 | 70001400 | ID=Msa0659610-mRNA-1:exon:20696;Parent=Msa0659610-mRNA-1 |
chr4_3 | exon | 70001602 | 70002193 | 70001602 | ID=Msa0659610-mRNA-1:exon:20697;Parent=Msa0659610-mRNA-1 |
chr4_3 | five_prime_UTR | 69994384 | 69994530 | 69994384 | ID=Msa0659610-mRNA-1:five_prime_utr;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 69994531 | 69994652 | 69994531 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 69994786 | 69994954 | 69994786 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 69995059 | 69995191 | 69995059 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 69998140 | 69998375 | 69998140 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 69999477 | 69999610 | 69999477 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 70000063 | 70000129 | 70000063 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 70000280 | 70000385 | 70000280 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 70000459 | 70000517 | 70000459 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 70000807 | 70000913 | 70000807 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 70000997 | 70001127 | 70000997 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 70001234 | 70001313 | 70001234 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 70001400 | 70001489 | 70001400 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | CDS | 70001602 | 70001772 | 70001602 | ID=Msa0659610-mRNA-1:cds;Parent=Msa0659610-mRNA-1 |
chr4_3 | three_prime_UTR | 70001773 | 70002193 | 70001773 | ID=Msa0659610-mRNA-1:three_prime_utr;Parent=Msa0659610-mRNA-1 |
Gene Sequence |
Protein sequence |