Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0660250 | XP_024626338.1 | 77.041 | 196 | 17 | 1 | 3 | 170 | 205 | 400 | 9.53e-95 | 303 |
| Msa0660250 | XP_024626338.1 | 87.879 | 99 | 12 | 0 | 166 | 264 | 586 | 684 | 7.37e-48 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0660250 | sp|Q9S9M2|WAKLD_ARATH | 48.780 | 82 | 35 | 2 | 112 | 193 | 404 | 478 | 5.16e-14 | 75.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0660250 | Q2HV73 | 77.041 | 196 | 17 | 1 | 3 | 170 | 205 | 400 | 4.55e-95 | 303 |
| Msa0660250 | Q2HV73 | 87.879 | 99 | 12 | 0 | 166 | 264 | 586 | 684 | 3.52e-48 | 179 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0660250 | Msa1389640 | 0.853160 | 2.871144e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0660250 | MtrunA17_Chr7g0248904 | 77.041 | 196 | 17 | 1 | 3 | 170 | 205 | 400 | 8.76e-99 | 303 |
| Msa0660250 | MtrunA17_Chr7g0248904 | 87.879 | 99 | 12 | 0 | 166 | 264 | 586 | 684 | 6.78e-52 | 179 |
| Msa0660250 | MtrunA17_Chr7g0248881 | 49.458 | 277 | 88 | 8 | 3 | 238 | 191 | 456 | 2.68e-67 | 220 |
| Msa0660250 | MtrunA17_Chr7g0248881 | 51.923 | 104 | 42 | 2 | 166 | 264 | 579 | 679 | 7.21e-17 | 80.1 |
| Msa0660250 | MtrunA17_Chr1g0158231 | 28.994 | 169 | 83 | 6 | 41 | 176 | 10 | 174 | 1.60e-14 | 72.8 |
| Msa0660250 | MtrunA17_Chr1g0158251 | 30.625 | 160 | 74 | 5 | 50 | 176 | 308 | 463 | 4.05e-14 | 72.0 |
| Msa0660250 | MtrunA17_Chr3g0125431 | 31.447 | 159 | 69 | 4 | 49 | 170 | 309 | 464 | 5.43e-14 | 71.6 |
| Msa0660250 | MtrunA17_Chr1g0158261 | 30.323 | 155 | 72 | 5 | 55 | 176 | 303 | 454 | 1.03e-13 | 70.9 |
| Msa0660250 | MtrunA17_Chr1g0158211 | 28.025 | 157 | 78 | 4 | 52 | 176 | 43 | 196 | 2.63e-13 | 69.3 |
| Msa0660250 | MtrunA17_Chr2g0293071 | 48.864 | 88 | 34 | 2 | 101 | 177 | 30 | 117 | 3.54e-13 | 68.6 |
| Msa0660250 | MtrunA17_Chr2g0293071 | 38.554 | 83 | 51 | 0 | 167 | 249 | 284 | 366 | 3.55e-12 | 65.9 |
| Msa0660250 | MtrunA17_Chr1g0158201 | 27.389 | 157 | 79 | 4 | 52 | 176 | 305 | 458 | 7.66e-13 | 68.2 |
| Msa0660250 | MtrunA17_Chr1g0158171 | 28.571 | 161 | 72 | 6 | 52 | 176 | 32 | 185 | 9.71e-13 | 67.4 |
| Msa0660250 | MtrunA17_Chr3g0112391 | 56.604 | 53 | 23 | 0 | 108 | 160 | 320 | 372 | 1.17e-12 | 67.4 |
| Msa0660250 | MtrunA17_Chr2g0293081 | 37.931 | 87 | 54 | 0 | 163 | 249 | 617 | 703 | 2.21e-12 | 66.6 |
| Msa0660250 | MtrunA17_Chr2g0293081 | 51.316 | 76 | 26 | 2 | 113 | 177 | 379 | 454 | 5.38e-12 | 65.5 |
| Msa0660250 | MtrunA17_Chr1g0148461 | 28.767 | 146 | 76 | 3 | 51 | 170 | 332 | 475 | 2.45e-12 | 66.6 |
| Msa0660250 | MtrunA17_Chr3g0125491 | 52.542 | 59 | 28 | 0 | 112 | 170 | 37 | 95 | 3.12e-12 | 65.9 |
| Msa0660250 | MtrunA17_Chr3g0125471 | 49.153 | 59 | 30 | 0 | 112 | 170 | 341 | 399 | 6.18e-11 | 62.4 |
| Msa0660250 | MtrunA17_Chr7g0265391 | 34.677 | 124 | 59 | 4 | 59 | 160 | 251 | 374 | 6.53e-11 | 62.4 |
| Msa0660250 | MtrunA17_Chr2g0279661 | 39.024 | 82 | 43 | 1 | 112 | 193 | 411 | 485 | 8.63e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0660250 | AT1G16150.1 | 48.780 | 82 | 35 | 2 | 112 | 193 | 404 | 478 | 5.25e-15 | 75.1 |
| Msa0660250 | AT1G16130.1 | 47.561 | 82 | 36 | 2 | 112 | 193 | 396 | 470 | 6.91e-15 | 74.7 |
| Msa0660250 | AT1G16120.1 | 51.899 | 79 | 25 | 2 | 112 | 177 | 409 | 487 | 4.44e-14 | 72.4 |
| Msa0660250 | AT1G79670.1 | 53.731 | 67 | 25 | 1 | 112 | 178 | 401 | 461 | 7.98e-14 | 71.6 |
| Msa0660250 | AT1G79670.2 | 53.731 | 67 | 25 | 1 | 112 | 178 | 364 | 424 | 8.00e-14 | 71.6 |
| Msa0660250 | AT1G16110.1 | 48.101 | 79 | 28 | 2 | 112 | 177 | 412 | 490 | 3.36e-13 | 69.7 |
| Msa0660250 | AT1G19390.1 | 50.725 | 69 | 29 | 2 | 112 | 176 | 431 | 498 | 1.34e-12 | 67.8 |
| Msa0660250 | AT1G17910.1 | 38.168 | 131 | 37 | 4 | 91 | 177 | 382 | 512 | 1.39e-12 | 67.8 |
| Msa0660250 | AT4G31100.1 | 33.125 | 160 | 64 | 6 | 52 | 176 | 340 | 491 | 2.00e-12 | 67.4 |
| Msa0660250 | AT1G21250.1 | 29.560 | 159 | 77 | 5 | 50 | 176 | 301 | 456 | 2.25e-12 | 67.0 |
| Msa0660250 | AT1G16260.1 | 46.250 | 80 | 30 | 1 | 111 | 177 | 369 | 448 | 5.16e-12 | 66.2 |
| Msa0660250 | AT1G16260.2 | 46.250 | 80 | 30 | 1 | 111 | 177 | 369 | 448 | 5.16e-12 | 66.2 |
| Msa0660250 | AT1G16160.1 | 46.835 | 79 | 29 | 2 | 112 | 177 | 412 | 490 | 5.23e-12 | 66.2 |
| Msa0660250 | AT1G16260.3 | 46.250 | 80 | 30 | 1 | 111 | 177 | 360 | 439 | 5.53e-12 | 65.9 |
| Msa0660250 | AT1G21240.1 | 50.000 | 62 | 28 | 1 | 118 | 176 | 401 | 462 | 8.74e-12 | 65.5 |
| Msa0660250 | AT1G21210.1 | 44.156 | 77 | 36 | 2 | 117 | 193 | 395 | 464 | 9.32e-12 | 65.5 |
| Msa0660250 | AT1G21230.1 | 29.545 | 176 | 83 | 6 | 51 | 193 | 295 | 462 | 1.16e-11 | 65.1 |
| Msa0660250 | AT1G29740.1 | 34.884 | 86 | 56 | 0 | 75 | 160 | 620 | 705 | 2.72e-11 | 63.9 |
| Msa0660250 | AT1G29740.2 | 41.250 | 80 | 45 | 1 | 86 | 165 | 633 | 710 | 2.84e-11 | 63.9 |
| Msa0660250 | AT1G69730.1 | 31.875 | 160 | 67 | 6 | 52 | 176 | 342 | 494 | 3.60e-11 | 63.5 |
| Msa0660250 | AT3G25490.1 | 46.774 | 62 | 30 | 1 | 118 | 176 | 94 | 155 | 5.33e-11 | 62.8 |
| Msa0660250 | AT1G21270.1 | 28.488 | 172 | 87 | 5 | 51 | 193 | 294 | 458 | 6.07e-11 | 62.8 |
Find 53 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCATTGGTGCAGGCTTTA+TGG | 0.192913 | 4_3:-70924231 | Msa0660250:CDS |
| AGGCTTTATGGTATTGTTTC+TGG | 0.197786 | 4_3:-70924219 | Msa0660250:CDS |
| CACCAATATTAGTTCCTCTT+AGG | 0.216706 | 4_3:-70924862 | Msa0660250:CDS |
| TCAAAAGTTTCCTGCCAAAT+TGG | 0.253697 | 4_3:-70924750 | Msa0660250:CDS |
| TATTGTTTCTGGTGGGTTAC+AGG | 0.263198 | 4_3:-70924208 | Msa0660250:intron |
| ACCTAATGCAGCAACCAATT+TGG | 0.266668 | 4_3:+70924736 | None:intergenic |
| ACAAGAGAGTTATCATCTTA+TGG | 0.275317 | 4_3:-70924108 | Msa0660250:intron |
| TGTAGTCATCTGTTGCTCTT+TGG | 0.293591 | 4_3:+70924046 | None:intergenic |
| ATGAGATGTTTGAGACTTAA+TGG | 0.298055 | 4_3:-70923277 | Msa0660250:CDS |
| GCCAAATTGGTTGCTGCATT+AGG | 0.313341 | 4_3:-70924737 | Msa0660250:intron |
| TACAACCAAAGTAGGTTTCT+TGG | 0.321585 | 4_3:-70924027 | Msa0660250:CDS |
| CCCCTAAGAGGAACTAATAT+TGG | 0.340904 | 4_3:+70924860 | None:intergenic |
| TTTAGATAACACAGTGGTTA+AGG | 0.347355 | 4_3:-70923341 | Msa0660250:CDS |
| AACATAATGTTGTAGATATA+TGG | 0.387467 | 4_3:-70924995 | Msa0660250:intron |
| ACCAATATTAGTTCCTCTTA+GGG | 0.408076 | 4_3:-70924861 | Msa0660250:CDS |
| GGTGAAACTGTTAAGTCTAT+AGG | 0.414340 | 4_3:-70924974 | Msa0660250:CDS |
| GAGTTATCATCTTATGGAAA+TGG | 0.423791 | 4_3:-70924102 | Msa0660250:CDS |
| AAGAGAATCACACTTCTGTT+TGG | 0.423893 | 4_3:+70924893 | None:intergenic |
| ATCTTATGGAAATGGAGAAA+TGG | 0.431485 | 4_3:-70924094 | Msa0660250:CDS |
| ACATTTCATTTCAGCGATGA+AGG | 0.434068 | 4_3:-70923382 | Msa0660250:intron |
| TTGCAGCTCTTGCCCCTAAG+AGG | 0.440964 | 4_3:+70924848 | None:intergenic |
| GCAGGTGTTGGCATTGGTGC+AGG | 0.449069 | 4_3:-70924239 | Msa0660250:intron |
| CTTGACCAAGAAACCTACTT+TGG | 0.456932 | 4_3:+70924022 | None:intergenic |
| CTTTATGGTATTGTTTCTGG+TGG | 0.463053 | 4_3:-70924216 | Msa0660250:CDS |
| TTGATCATCTTTGATATGTA+CGG | 0.467173 | 4_3:+70923189 | None:intergenic |
| GTTGAAACCTCTTTCATCGT+TGG | 0.477113 | 4_3:+70923244 | None:intergenic |
| TGATGAACAAAGCATATTAG+AGG | 0.478744 | 4_3:-70924936 | Msa0660250:CDS |
| ACTGTACTTGTTCTCAGGGA+AGG | 0.481643 | 4_3:-70924805 | Msa0660250:CDS |
| AAGTCTATAGGAGAGGCTTA+TGG | 0.482938 | 4_3:-70924962 | Msa0660250:CDS |
| GTATTTGCAGGTGTTGGCAT+TGG | 0.495339 | 4_3:-70924245 | Msa0660250:intron |
| TTTCTTGGTCAAGGCGGCTA+TGG | 0.495540 | 4_3:-70924012 | Msa0660250:CDS |
| ACTGCGACTATGGTTCCATC+TGG | 0.507506 | 4_3:+70923967 | None:intergenic |
| CAGATGACTACAACCAAAGT+AGG | 0.527436 | 4_3:-70924035 | Msa0660250:CDS |
| TTTATGGTATTGTTTCTGGT+GGG | 0.530497 | 4_3:-70924215 | Msa0660250:CDS |
| GGAATTAGAAGCACTAAGAA+AGG | 0.537596 | 4_3:-70923221 | Msa0660250:CDS |
| AATGCAGCAACCAATTTGGC+AGG | 0.538549 | 4_3:+70924740 | None:intergenic |
| CAAAGTAGGTTTCTTGGTCA+AGG | 0.542292 | 4_3:-70924021 | Msa0660250:CDS |
| GAAAAGACCAACGATGAAAG+AGG | 0.551113 | 4_3:-70923251 | Msa0660250:CDS |
| TCTCAGGGAAGGCTTGCAGA+TGG | 0.570504 | 4_3:-70924794 | Msa0660250:CDS |
| AACGATGAAAGAGGTTTCAA+CGG | 0.580471 | 4_3:-70923242 | Msa0660250:CDS |
| GATCAAGAATCACCAAGTGA+TGG | 0.590193 | 4_3:-70923172 | Msa0660250:CDS |
| CTAAGTGATTGTCCATCACT+TGG | 0.604324 | 4_3:+70923160 | None:intergenic |
| ACACAGTGGTTAAGGAAGCA+AGG | 0.606586 | 4_3:-70923333 | Msa0660250:CDS |
| TACAAAGGCATGTTACCAGA+TGG | 0.615195 | 4_3:-70923982 | Msa0660250:CDS |
| AACTGTTAAGTCTATAGGAG+AGG | 0.624509 | 4_3:-70924969 | Msa0660250:CDS |
| CAAGTGATGGACAATCACTT+AGG | 0.627113 | 4_3:-70923159 | Msa0660250:CDS |
| GGCTATGGCACAGTGTACAA+AGG | 0.639295 | 4_3:-70923997 | Msa0660250:CDS |
| CCAATATTAGTTCCTCTTAG+GGG | 0.651084 | 4_3:-70924860 | Msa0660250:CDS |
| AGAGGCAAATGAGTTGCAAG+TGG | 0.659999 | 4_3:-70924918 | Msa0660250:CDS |
| TATATTTCATGAGTCTACAG+TGG | 0.669424 | 4_3:-70923122 | Msa0660250:CDS |
| TAGGGGCAAGAGCTGCAAAG+AGG | 0.670950 | 4_3:-70924843 | Msa0660250:CDS |
| GTATGTGGACTCCATTTGCG+AGG | 0.673358 | 4_3:+70923084 | None:intergenic |
| AGTAGGTTTCTTGGTCAAGG+CGG | 0.690940 | 4_3:-70924018 | Msa0660250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATACTAGAAATTAAATAA+GGG | + | chr4_3:70923664-70923683 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTAATCCTTTTT+TGG | - | chr4_3:70923848-70923867 | Msa0660250:intron | 10.0% |
| !!! | AAGACATTTTTAAAATTTAA+GGG | + | chr4_3:70924089-70924108 | None:intergenic | 10.0% |
| !!! | AAAGACATTTTTAAAATTTA+AGG | + | chr4_3:70924090-70924109 | None:intergenic | 10.0% |
| !! | TATATCAATATATAAAGAAA+AGG | - | chr4_3:70924173-70924192 | Msa0660250:intron | 10.0% |
| !! | AAATACTAGAAATTAAATAA+GGG | + | chr4_3:70923664-70923683 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTAATCCTTTTT+TGG | - | chr4_3:70923848-70923867 | Msa0660250:intron | 10.0% |
| !!! | AAGACATTTTTAAAATTTAA+GGG | + | chr4_3:70924089-70924108 | None:intergenic | 10.0% |
| !!! | AAAGACATTTTTAAAATTTA+AGG | + | chr4_3:70924090-70924109 | None:intergenic | 10.0% |
| !! | TATATCAATATATAAAGAAA+AGG | - | chr4_3:70924173-70924192 | Msa0660250:intron | 10.0% |
| !! | CAAATACTAGAAATTAAATA+AGG | + | chr4_3:70923665-70923684 | None:intergenic | 15.0% |
| !! | CAAATACTAGAAATTAAATA+AGG | + | chr4_3:70923665-70923684 | None:intergenic | 15.0% |
| !! | ATGAATGAATCATTATAGAT+AGG | - | chr4_3:70923151-70923170 | Msa0660250:CDS | 20.0% |
| !! | AACATAATGTTGTAGATATA+TGG | - | chr4_3:70923362-70923381 | Msa0660250:CDS | 20.0% |
| !!! | ATCAATAGTTTTGAAACAAA+AGG | - | chr4_3:70923774-70923793 | Msa0660250:intron | 20.0% |
| !! | ATGAATGAATCATTATAGAT+AGG | - | chr4_3:70923151-70923170 | Msa0660250:CDS | 20.0% |
| !! | AACATAATGTTGTAGATATA+TGG | - | chr4_3:70923362-70923381 | Msa0660250:CDS | 20.0% |
| !!! | ATCAATAGTTTTGAAACAAA+AGG | - | chr4_3:70923774-70923793 | Msa0660250:intron | 20.0% |
| ! | AAAAATCACTAACTAGACAT+TGG | - | chr4_3:70923740-70923759 | Msa0660250:intron | 25.0% |
| ! | GAAATAGACTAAACATTAGT+AGG | - | chr4_3:70923881-70923900 | Msa0660250:intron | 25.0% |
| ! | AAATGTCTTTATGTATTTGC+AGG | - | chr4_3:70924100-70924119 | Msa0660250:CDS | 25.0% |
| ! | ATGTATTCATAGACAAGTAA+TGG | + | chr4_3:70924540-70924559 | None:intergenic | 25.0% |
| !! | GTTAAATGAGTCTTATCTAA+CGG | + | chr4_3:70924786-70924805 | None:intergenic | 25.0% |
| ! | TCTTCATCATTGAATGTTAT+CGG | + | chr4_3:70924934-70924953 | None:intergenic | 25.0% |
| !! | TCAAATTTTAGATAACACAG+TGG | - | chr4_3:70925010-70925029 | Msa0660250:intron | 25.0% |
| ! | TTGATCATCTTTGATATGTA+CGG | + | chr4_3:70925171-70925190 | None:intergenic | 25.0% |
| ! | AAAAATCACTAACTAGACAT+TGG | - | chr4_3:70923740-70923759 | Msa0660250:intron | 25.0% |
| ! | GAAATAGACTAAACATTAGT+AGG | - | chr4_3:70923881-70923900 | Msa0660250:intron | 25.0% |
| ! | AAATGTCTTTATGTATTTGC+AGG | - | chr4_3:70924100-70924119 | Msa0660250:CDS | 25.0% |
| ! | ATGTATTCATAGACAAGTAA+TGG | + | chr4_3:70924540-70924559 | None:intergenic | 25.0% |
| !! | GTTAAATGAGTCTTATCTAA+CGG | + | chr4_3:70924786-70924805 | None:intergenic | 25.0% |
| ! | TCTTCATCATTGAATGTTAT+CGG | + | chr4_3:70924934-70924953 | None:intergenic | 25.0% |
| !! | TCAAATTTTAGATAACACAG+TGG | - | chr4_3:70925010-70925029 | Msa0660250:intron | 25.0% |
| ! | TTGATCATCTTTGATATGTA+CGG | + | chr4_3:70925171-70925190 | None:intergenic | 25.0% |
| ! | TGCAACCATTAAAAGTTTTG+CGG | - | chr4_3:70923320-70923339 | Msa0660250:CDS | 30.0% |
| TGATGAACAAAGCATATTAG+AGG | - | chr4_3:70923421-70923440 | Msa0660250:intron | 30.0% | |
| ACCAATATTAGTTCCTCTTA+GGG | - | chr4_3:70923496-70923515 | Msa0660250:intron | 30.0% | |
| CAAGTACAGTAAAAACTATC+AGG | + | chr4_3:70923542-70923561 | None:intergenic | 30.0% | |
| ! | TTTTTACTGTACTTGTTCTC+AGG | - | chr4_3:70923547-70923566 | Msa0660250:intron | 30.0% |
| ! | TTTTACTGTACTTGTTCTCA+GGG | - | chr4_3:70923548-70923567 | Msa0660250:intron | 30.0% |
| ! | TTAGTTCTTTGTCACAACTA+AGG | - | chr4_3:70923708-70923727 | Msa0660250:intron | 30.0% |
| TAGTTCTTTGTCACAACTAA+GGG | - | chr4_3:70923709-70923728 | Msa0660250:intron | 30.0% | |
| AACTAGACATTGGATTTCTA+AGG | - | chr4_3:70923750-70923769 | Msa0660250:intron | 30.0% | |
| ! | TGTTTAGTCTATTTCTCTCT+AGG | + | chr4_3:70923876-70923895 | None:intergenic | 30.0% |
| !! | TTTATGGTATTGTTTCTGGT+GGG | - | chr4_3:70924142-70924161 | Msa0660250:intron | 30.0% |
| TTCGTAAGGAAAAGTTATTC+AGG | - | chr4_3:70924206-70924225 | Msa0660250:intron | 30.0% | |
| GAAAAGTTATTCAGGCAAAA+CGG | - | chr4_3:70924214-70924233 | Msa0660250:CDS | 30.0% | |
| ACAAGAGAGTTATCATCTTA+TGG | - | chr4_3:70924249-70924268 | Msa0660250:intron | 30.0% | |
| GAGTTATCATCTTATGGAAA+TGG | - | chr4_3:70924255-70924274 | Msa0660250:intron | 30.0% | |
| ATCTTATGGAAATGGAGAAA+TGG | - | chr4_3:70924263-70924282 | Msa0660250:intron | 30.0% | |
| ! | TTTCTATTTGGTTTCTGTCA+AGG | + | chr4_3:70924431-70924450 | None:intergenic | 30.0% |
| ! | AGGAACATTGTCAAACTTTT+AGG | - | chr4_3:70924492-70924511 | Msa0660250:intron | 30.0% |
| GTCTATGAATACATTCACAA+CGG | - | chr4_3:70924546-70924565 | Msa0660250:intron | 30.0% | |
| TTTATGTCTCTATGGAAGAT+TGG | + | chr4_3:70924693-70924712 | None:intergenic | 30.0% | |
| !!! | TACTTGGTTTTATGTCTCTA+TGG | + | chr4_3:70924701-70924720 | None:intergenic | 30.0% |
| TGACTTGACTGAAAATATTC+AGG | + | chr4_3:70924844-70924863 | None:intergenic | 30.0% | |
| AAGAGTGACGTATATAGTTT+CGG | - | chr4_3:70924874-70924893 | Msa0660250:CDS | 30.0% | |
| AACATTCAATGATGAAGATG+AGG | - | chr4_3:70924936-70924955 | Msa0660250:CDS | 30.0% | |
| ACATTCAATGATGAAGATGA+GGG | - | chr4_3:70924937-70924956 | Msa0660250:CDS | 30.0% | |
| TTTAGATAACACAGTGGTTA+AGG | - | chr4_3:70925016-70925035 | Msa0660250:intron | 30.0% | |
| ! | ATGAGATGTTTGAGACTTAA+TGG | - | chr4_3:70925080-70925099 | Msa0660250:intron | 30.0% |
| TATATTTCATGAGTCTACAG+TGG | - | chr4_3:70925235-70925254 | Msa0660250:intron | 30.0% | |
| ! | TGCAACCATTAAAAGTTTTG+CGG | - | chr4_3:70923320-70923339 | Msa0660250:CDS | 30.0% |
| TGATGAACAAAGCATATTAG+AGG | - | chr4_3:70923421-70923440 | Msa0660250:intron | 30.0% | |
| ACCAATATTAGTTCCTCTTA+GGG | - | chr4_3:70923496-70923515 | Msa0660250:intron | 30.0% | |
| CAAGTACAGTAAAAACTATC+AGG | + | chr4_3:70923542-70923561 | None:intergenic | 30.0% | |
| ! | TTTTTACTGTACTTGTTCTC+AGG | - | chr4_3:70923547-70923566 | Msa0660250:intron | 30.0% |
| ! | TTTTACTGTACTTGTTCTCA+GGG | - | chr4_3:70923548-70923567 | Msa0660250:intron | 30.0% |
| ! | TTAGTTCTTTGTCACAACTA+AGG | - | chr4_3:70923708-70923727 | Msa0660250:intron | 30.0% |
| TAGTTCTTTGTCACAACTAA+GGG | - | chr4_3:70923709-70923728 | Msa0660250:intron | 30.0% | |
| AACTAGACATTGGATTTCTA+AGG | - | chr4_3:70923750-70923769 | Msa0660250:intron | 30.0% | |
| ! | TGTTTAGTCTATTTCTCTCT+AGG | + | chr4_3:70923876-70923895 | None:intergenic | 30.0% |
| !! | TTTATGGTATTGTTTCTGGT+GGG | - | chr4_3:70924142-70924161 | Msa0660250:intron | 30.0% |
| TTCGTAAGGAAAAGTTATTC+AGG | - | chr4_3:70924206-70924225 | Msa0660250:intron | 30.0% | |
| GAAAAGTTATTCAGGCAAAA+CGG | - | chr4_3:70924214-70924233 | Msa0660250:CDS | 30.0% | |
| ACAAGAGAGTTATCATCTTA+TGG | - | chr4_3:70924249-70924268 | Msa0660250:intron | 30.0% | |
| GAGTTATCATCTTATGGAAA+TGG | - | chr4_3:70924255-70924274 | Msa0660250:intron | 30.0% | |
| ATCTTATGGAAATGGAGAAA+TGG | - | chr4_3:70924263-70924282 | Msa0660250:intron | 30.0% | |
| ! | TTTCTATTTGGTTTCTGTCA+AGG | + | chr4_3:70924431-70924450 | None:intergenic | 30.0% |
| ! | AGGAACATTGTCAAACTTTT+AGG | - | chr4_3:70924492-70924511 | Msa0660250:intron | 30.0% |
| GTCTATGAATACATTCACAA+CGG | - | chr4_3:70924546-70924565 | Msa0660250:intron | 30.0% | |
| TTTATGTCTCTATGGAAGAT+TGG | + | chr4_3:70924693-70924712 | None:intergenic | 30.0% | |
| !!! | TACTTGGTTTTATGTCTCTA+TGG | + | chr4_3:70924701-70924720 | None:intergenic | 30.0% |
| TGACTTGACTGAAAATATTC+AGG | + | chr4_3:70924844-70924863 | None:intergenic | 30.0% | |
| AAGAGTGACGTATATAGTTT+CGG | - | chr4_3:70924874-70924893 | Msa0660250:CDS | 30.0% | |
| AACATTCAATGATGAAGATG+AGG | - | chr4_3:70924936-70924955 | Msa0660250:CDS | 30.0% | |
| ACATTCAATGATGAAGATGA+GGG | - | chr4_3:70924937-70924956 | Msa0660250:CDS | 30.0% | |
| TTTAGATAACACAGTGGTTA+AGG | - | chr4_3:70925016-70925035 | Msa0660250:intron | 30.0% | |
| ! | ATGAGATGTTTGAGACTTAA+TGG | - | chr4_3:70925080-70925099 | Msa0660250:intron | 30.0% |
| TATATTTCATGAGTCTACAG+TGG | - | chr4_3:70925235-70925254 | Msa0660250:intron | 30.0% | |
| ATGCCTATAAGCTGTTAGAT+AGG | - | chr4_3:70923087-70923106 | Msa0660250:CDS | 35.0% | |
| GATAGATAGCTATGCAAGTA+CGG | - | chr4_3:70923270-70923289 | Msa0660250:CDS | 35.0% | |
| GGTGAAACTGTTAAGTCTAT+AGG | - | chr4_3:70923383-70923402 | Msa0660250:intron | 35.0% | |
| AACTGTTAAGTCTATAGGAG+AGG | - | chr4_3:70923388-70923407 | Msa0660250:intron | 35.0% | |
| AAGAGAATCACACTTCTGTT+TGG | + | chr4_3:70923467-70923486 | None:intergenic | 35.0% | |
| CACCAATATTAGTTCCTCTT+AGG | - | chr4_3:70923495-70923514 | Msa0660250:intron | 35.0% | |
| CCAATATTAGTTCCTCTTAG+GGG | - | chr4_3:70923497-70923516 | Msa0660250:intron | 35.0% | |
| TCAAAAGTTTCCTGCCAAAT+TGG | - | chr4_3:70923607-70923626 | Msa0660250:intron | 35.0% | |
| GTTGCTGCATTAGGTAATAT+TGG | - | chr4_3:70923629-70923648 | Msa0660250:intron | 35.0% | |
| AAAGTTCATCAGAGTCTTGA+GGG | + | chr4_3:70923934-70923953 | None:intergenic | 35.0% | |
| AAAAGTTCATCAGAGTCTTG+AGG | + | chr4_3:70923935-70923954 | None:intergenic | 35.0% | |
| !! | AGATGGACTGCAAGTAAAAA+TGG | - | chr4_3:70924022-70924041 | Msa0660250:CDS | 35.0% |
| ! | GTTTGTTACTAGTTCCAAGT+CGG | - | chr4_3:70924049-70924068 | Msa0660250:CDS | 35.0% |
| CTTTATGTATTTGCAGGTGT+TGG | - | chr4_3:70924106-70924125 | Msa0660250:CDS | 35.0% | |
| ! | AGGCTTTATGGTATTGTTTC+TGG | - | chr4_3:70924138-70924157 | Msa0660250:intron | 35.0% |
| !! | CTTTATGGTATTGTTTCTGG+TGG | - | chr4_3:70924141-70924160 | Msa0660250:intron | 35.0% |
| TACAACCAAAGTAGGTTTCT+TGG | - | chr4_3:70924330-70924349 | Msa0660250:intron | 35.0% | |
| !! | TGACTTTTTAACTGCGACTA+TGG | + | chr4_3:70924403-70924422 | None:intergenic | 35.0% |
| CGTTGACAAACGTTTCTATT+TGG | + | chr4_3:70924443-70924462 | None:intergenic | 35.0% | |
| AAAGTTTGACAATGTTCCTG+TGG | + | chr4_3:70924491-70924510 | None:intergenic | 35.0% | |
| ! | TTGTCTAGGAGTATGTTACT+TGG | + | chr4_3:70924717-70924736 | None:intergenic | 35.0% |
| TGGCACTATAGTTATTGTCT+AGG | + | chr4_3:70924731-70924750 | None:intergenic | 35.0% | |
| TGTTCCAAAATCAGACACTT+TGG | + | chr4_3:70924751-70924770 | None:intergenic | 35.0% | |
| ACATTTCATTTCAGCGATGA+AGG | - | chr4_3:70924975-70924994 | Msa0660250:CDS | 35.0% | |
| AACGATGAAAGAGGTTTCAA+CGG | - | chr4_3:70925115-70925134 | Msa0660250:intron | 35.0% | |
| !! | GGAATTAGAAGCACTAAGAA+AGG | - | chr4_3:70925136-70925155 | Msa0660250:intron | 35.0% |
| ATGCCTATAAGCTGTTAGAT+AGG | - | chr4_3:70923087-70923106 | Msa0660250:CDS | 35.0% | |
| GATAGATAGCTATGCAAGTA+CGG | - | chr4_3:70923270-70923289 | Msa0660250:CDS | 35.0% | |
| GGTGAAACTGTTAAGTCTAT+AGG | - | chr4_3:70923383-70923402 | Msa0660250:intron | 35.0% | |
| AACTGTTAAGTCTATAGGAG+AGG | - | chr4_3:70923388-70923407 | Msa0660250:intron | 35.0% | |
| AAGAGAATCACACTTCTGTT+TGG | + | chr4_3:70923467-70923486 | None:intergenic | 35.0% | |
| CACCAATATTAGTTCCTCTT+AGG | - | chr4_3:70923495-70923514 | Msa0660250:intron | 35.0% | |
| CCAATATTAGTTCCTCTTAG+GGG | - | chr4_3:70923497-70923516 | Msa0660250:intron | 35.0% | |
| TCAAAAGTTTCCTGCCAAAT+TGG | - | chr4_3:70923607-70923626 | Msa0660250:intron | 35.0% | |
| GTTGCTGCATTAGGTAATAT+TGG | - | chr4_3:70923629-70923648 | Msa0660250:intron | 35.0% | |
| AAAGTTCATCAGAGTCTTGA+GGG | + | chr4_3:70923934-70923953 | None:intergenic | 35.0% | |
| AAAAGTTCATCAGAGTCTTG+AGG | + | chr4_3:70923935-70923954 | None:intergenic | 35.0% | |
| !! | AGATGGACTGCAAGTAAAAA+TGG | - | chr4_3:70924022-70924041 | Msa0660250:CDS | 35.0% |
| ! | GTTTGTTACTAGTTCCAAGT+CGG | - | chr4_3:70924049-70924068 | Msa0660250:CDS | 35.0% |
| CTTTATGTATTTGCAGGTGT+TGG | - | chr4_3:70924106-70924125 | Msa0660250:CDS | 35.0% | |
| ! | AGGCTTTATGGTATTGTTTC+TGG | - | chr4_3:70924138-70924157 | Msa0660250:intron | 35.0% |
| !! | CTTTATGGTATTGTTTCTGG+TGG | - | chr4_3:70924141-70924160 | Msa0660250:intron | 35.0% |
| TACAACCAAAGTAGGTTTCT+TGG | - | chr4_3:70924330-70924349 | Msa0660250:intron | 35.0% | |
| !! | TGACTTTTTAACTGCGACTA+TGG | + | chr4_3:70924403-70924422 | None:intergenic | 35.0% |
| CGTTGACAAACGTTTCTATT+TGG | + | chr4_3:70924443-70924462 | None:intergenic | 35.0% | |
| AAAGTTTGACAATGTTCCTG+TGG | + | chr4_3:70924491-70924510 | None:intergenic | 35.0% | |
| ! | TTGTCTAGGAGTATGTTACT+TGG | + | chr4_3:70924717-70924736 | None:intergenic | 35.0% |
| TGGCACTATAGTTATTGTCT+AGG | + | chr4_3:70924731-70924750 | None:intergenic | 35.0% | |
| TGTTCCAAAATCAGACACTT+TGG | + | chr4_3:70924751-70924770 | None:intergenic | 35.0% | |
| ACATTTCATTTCAGCGATGA+AGG | - | chr4_3:70924975-70924994 | Msa0660250:CDS | 35.0% | |
| AACGATGAAAGAGGTTTCAA+CGG | - | chr4_3:70925115-70925134 | Msa0660250:intron | 35.0% | |
| !! | GGAATTAGAAGCACTAAGAA+AGG | - | chr4_3:70925136-70925155 | Msa0660250:intron | 35.0% |
| ACGCCTATCTAACAGCTTAT+AGG | + | chr4_3:70923093-70923112 | None:intergenic | 40.0% | |
| GCATAGCTATCTATCTATCG+TGG | + | chr4_3:70923265-70923284 | None:intergenic | 40.0% | |
| ! | GTGAGCCGCAAAACTTTTAA+TGG | + | chr4_3:70923328-70923347 | None:intergenic | 40.0% |
| AAGTCTATAGGAGAGGCTTA+TGG | - | chr4_3:70923395-70923414 | Msa0660250:intron | 40.0% | |
| CCCCTAAGAGGAACTAATAT+TGG | + | chr4_3:70923500-70923519 | None:intergenic | 40.0% | |
| ACCTAATGCAGCAACCAATT+TGG | + | chr4_3:70923624-70923643 | None:intergenic | 40.0% | |
| TTCTCTCTAGGTGCCAAAAA+AGG | + | chr4_3:70923864-70923883 | None:intergenic | 40.0% | |
| AAGTTCATCAGAGTCTTGAG+GGG | + | chr4_3:70923933-70923952 | None:intergenic | 40.0% | |
| ! | TGACCTAGAGTACTTACTCT+CGG | - | chr4_3:70923957-70923976 | Msa0660250:intron | 40.0% |
| ATCAACGACTAAGATTTCGC+TGG | - | chr4_3:70923992-70924011 | Msa0660250:CDS | 40.0% | |
| !! | TATTGTTTCTGGTGGGTTAC+AGG | - | chr4_3:70924149-70924168 | Msa0660250:intron | 40.0% |
| AAGTTATTCAGGCAAAACGG+TGG | - | chr4_3:70924217-70924236 | Msa0660250:CDS | 40.0% | |
| TGTAGTCATCTGTTGCTCTT+TGG | + | chr4_3:70924314-70924333 | None:intergenic | 40.0% | |
| CAGATGACTACAACCAAAGT+AGG | - | chr4_3:70924322-70924341 | Msa0660250:intron | 40.0% | |
| CTTGACCAAGAAACCTACTT+TGG | + | chr4_3:70924338-70924357 | None:intergenic | 40.0% | |
| CAAAGTAGGTTTCTTGGTCA+AGG | - | chr4_3:70924336-70924355 | Msa0660250:intron | 40.0% | |
| ! | TACAAAGGCATGTTACCAGA+TGG | - | chr4_3:70924375-70924394 | Msa0660250:intron | 40.0% |
| TCTTATCTCAGATCAACCAC+AGG | - | chr4_3:70924472-70924491 | Msa0660250:intron | 40.0% | |
| ACTCTTTCCCAACATATCCA+TGG | - | chr4_3:70924570-70924589 | Msa0660250:intron | 40.0% | |
| CTCTTTCCCAACATATCCAT+GGG | - | chr4_3:70924571-70924590 | Msa0660250:intron | 40.0% | |
| GTCTTTCCCATGGATATGTT+GGG | + | chr4_3:70924580-70924599 | None:intergenic | 40.0% | |
| CAACCTCACATGCAATTCTA+AGG | + | chr4_3:70924632-70924651 | None:intergenic | 40.0% | |
| !! | AGTGCCAAAGTGTCTGATTT+TGG | - | chr4_3:70924744-70924763 | Msa0660250:CDS | 40.0% |
| TGACGTATATAGTTTCGGTG+TGG | - | chr4_3:70924879-70924898 | Msa0660250:CDS | 40.0% | |
| ! | GTGCTTGTTGAGCTTATAAC+CGG | - | chr4_3:70924901-70924920 | Msa0660250:CDS | 40.0% |
| AGATGAGGGTCAGAATATGA+CGG | - | chr4_3:70924951-70924970 | Msa0660250:CDS | 40.0% | |
| GAAAAGACCAACGATGAAAG+AGG | - | chr4_3:70925106-70925125 | Msa0660250:intron | 40.0% | |
| GTTGAAACCTCTTTCATCGT+TGG | + | chr4_3:70925116-70925135 | None:intergenic | 40.0% | |
| GATCAAGAATCACCAAGTGA+TGG | - | chr4_3:70925185-70925204 | Msa0660250:intron | 40.0% | |
| CTAAGTGATTGTCCATCACT+TGG | + | chr4_3:70925200-70925219 | None:intergenic | 40.0% | |
| !! | CAAGTGATGGACAATCACTT+AGG | - | chr4_3:70925198-70925217 | Msa0660250:intron | 40.0% |
| ACGCCTATCTAACAGCTTAT+AGG | + | chr4_3:70923093-70923112 | None:intergenic | 40.0% | |
| GCATAGCTATCTATCTATCG+TGG | + | chr4_3:70923265-70923284 | None:intergenic | 40.0% | |
| ! | GTGAGCCGCAAAACTTTTAA+TGG | + | chr4_3:70923328-70923347 | None:intergenic | 40.0% |
| AAGTCTATAGGAGAGGCTTA+TGG | - | chr4_3:70923395-70923414 | Msa0660250:intron | 40.0% | |
| CCCCTAAGAGGAACTAATAT+TGG | + | chr4_3:70923500-70923519 | None:intergenic | 40.0% | |
| ACCTAATGCAGCAACCAATT+TGG | + | chr4_3:70923624-70923643 | None:intergenic | 40.0% | |
| TTCTCTCTAGGTGCCAAAAA+AGG | + | chr4_3:70923864-70923883 | None:intergenic | 40.0% | |
| AAGTTCATCAGAGTCTTGAG+GGG | + | chr4_3:70923933-70923952 | None:intergenic | 40.0% | |
| ! | TGACCTAGAGTACTTACTCT+CGG | - | chr4_3:70923957-70923976 | Msa0660250:intron | 40.0% |
| ATCAACGACTAAGATTTCGC+TGG | - | chr4_3:70923992-70924011 | Msa0660250:CDS | 40.0% | |
| !! | TATTGTTTCTGGTGGGTTAC+AGG | - | chr4_3:70924149-70924168 | Msa0660250:intron | 40.0% |
| AAGTTATTCAGGCAAAACGG+TGG | - | chr4_3:70924217-70924236 | Msa0660250:CDS | 40.0% | |
| TGTAGTCATCTGTTGCTCTT+TGG | + | chr4_3:70924314-70924333 | None:intergenic | 40.0% | |
| CAGATGACTACAACCAAAGT+AGG | - | chr4_3:70924322-70924341 | Msa0660250:intron | 40.0% | |
| CTTGACCAAGAAACCTACTT+TGG | + | chr4_3:70924338-70924357 | None:intergenic | 40.0% | |
| CAAAGTAGGTTTCTTGGTCA+AGG | - | chr4_3:70924336-70924355 | Msa0660250:intron | 40.0% | |
| ! | TACAAAGGCATGTTACCAGA+TGG | - | chr4_3:70924375-70924394 | Msa0660250:intron | 40.0% |
| TCTTATCTCAGATCAACCAC+AGG | - | chr4_3:70924472-70924491 | Msa0660250:intron | 40.0% | |
| ACTCTTTCCCAACATATCCA+TGG | - | chr4_3:70924570-70924589 | Msa0660250:intron | 40.0% | |
| CTCTTTCCCAACATATCCAT+GGG | - | chr4_3:70924571-70924590 | Msa0660250:intron | 40.0% | |
| GTCTTTCCCATGGATATGTT+GGG | + | chr4_3:70924580-70924599 | None:intergenic | 40.0% | |
| CAACCTCACATGCAATTCTA+AGG | + | chr4_3:70924632-70924651 | None:intergenic | 40.0% | |
| !! | AGTGCCAAAGTGTCTGATTT+TGG | - | chr4_3:70924744-70924763 | Msa0660250:CDS | 40.0% |
| TGACGTATATAGTTTCGGTG+TGG | - | chr4_3:70924879-70924898 | Msa0660250:CDS | 40.0% | |
| ! | GTGCTTGTTGAGCTTATAAC+CGG | - | chr4_3:70924901-70924920 | Msa0660250:CDS | 40.0% |
| AGATGAGGGTCAGAATATGA+CGG | - | chr4_3:70924951-70924970 | Msa0660250:CDS | 40.0% | |
| GAAAAGACCAACGATGAAAG+AGG | - | chr4_3:70925106-70925125 | Msa0660250:intron | 40.0% | |
| GTTGAAACCTCTTTCATCGT+TGG | + | chr4_3:70925116-70925135 | None:intergenic | 40.0% | |
| GATCAAGAATCACCAAGTGA+TGG | - | chr4_3:70925185-70925204 | Msa0660250:intron | 40.0% | |
| CTAAGTGATTGTCCATCACT+TGG | + | chr4_3:70925200-70925219 | None:intergenic | 40.0% | |
| !! | CAAGTGATGGACAATCACTT+AGG | - | chr4_3:70925198-70925217 | Msa0660250:intron | 40.0% |
| GGCTTGCAAGCAGAGAATAT+AGG | - | chr4_3:70923172-70923191 | Msa0660250:CDS | 45.0% | |
| AGAGGCAAATGAGTTGCAAG+TGG | - | chr4_3:70923439-70923458 | Msa0660250:intron | 45.0% | |
| ACTGTACTTGTTCTCAGGGA+AGG | - | chr4_3:70923552-70923571 | Msa0660250:intron | 45.0% | |
| AATGCAGCAACCAATTTGGC+AGG | + | chr4_3:70923620-70923639 | None:intergenic | 45.0% | |
| GCCAAATTGGTTGCTGCATT+AGG | - | chr4_3:70923620-70923639 | Msa0660250:intron | 45.0% | |
| AGTTCATCAGAGTCTTGAGG+GGG | + | chr4_3:70923932-70923951 | None:intergenic | 45.0% | |
| TGACCGAGAGTAAGTACTCT+AGG | + | chr4_3:70923963-70923982 | None:intergenic | 45.0% | |
| ! | AGAAGCAAAGACTACCGACT+TGG | + | chr4_3:70924066-70924085 | None:intergenic | 45.0% |
| !! | GTATTTGCAGGTGTTGGCAT+TGG | - | chr4_3:70924112-70924131 | Msa0660250:intron | 45.0% |
| AAGGAGAGCGAGTATTCGTA+AGG | - | chr4_3:70924192-70924211 | Msa0660250:intron | 45.0% | |
| ! | GGCAAAGCTTTTTACAGCAG+AGG | - | chr4_3:70924284-70924303 | Msa0660250:intron | 45.0% |
| AGTAGGTTTCTTGGTCAAGG+CGG | - | chr4_3:70924339-70924358 | Msa0660250:intron | 45.0% | |
| GGTCTTTCCCATGGATATGT+TGG | + | chr4_3:70924581-70924600 | None:intergenic | 45.0% | |
| ATGAATCACGGTCTTTCCCA+TGG | + | chr4_3:70924590-70924609 | None:intergenic | 45.0% | |
| ACCGTGATTCATCCCTTTCA+TGG | - | chr4_3:70924598-70924617 | Msa0660250:intron | 45.0% | |
| CCCATGAAAGGGATGAATCA+CGG | + | chr4_3:70924602-70924621 | None:intergenic | 45.0% | |
| CCGTGATTCATCCCTTTCAT+GGG | - | chr4_3:70924599-70924618 | Msa0660250:intron | 45.0% | |
| AAGGCGACTTTCCCATGAAA+GGG | + | chr4_3:70924613-70924632 | None:intergenic | 45.0% | |
| TAAGGCGACTTTCCCATGAA+AGG | + | chr4_3:70924614-70924633 | None:intergenic | 45.0% | |
| TCGCCTTAGAATTGCATGTG+AGG | - | chr4_3:70924626-70924645 | Msa0660250:intron | 45.0% | |
| AGAATTGCATGTGAGGTTGC+CGG | - | chr4_3:70924633-70924652 | Msa0660250:intron | 45.0% | |
| ATGCATATATGCCACTGCTC+CGG | + | chr4_3:70924655-70924674 | None:intergenic | 45.0% | |
| CTCATTTAACCCACAGCAGT+AGG | - | chr4_3:70924796-70924815 | Msa0660250:CDS | 45.0% | |
| ATTTAACCCACAGCAGTAGG+AGG | - | chr4_3:70924799-70924818 | Msa0660250:CDS | 45.0% | |
| ! | AAAGTACCTCCTACTGCTGT+GGG | + | chr4_3:70924808-70924827 | None:intergenic | 45.0% |
| !! | AAAAGTACCTCCTACTGCTG+TGG | + | chr4_3:70924809-70924828 | None:intergenic | 45.0% |
| !!! | ACAGCAGTAGGAGGTACTTT+TGG | - | chr4_3:70924808-70924827 | Msa0660250:CDS | 45.0% |
| !!! | CAGCAGTAGGAGGTACTTTT+GGG | - | chr4_3:70924809-70924828 | Msa0660250:CDS | 45.0% |
| !!! | AGGAGGTACTTTTGGGTACA+TGG | - | chr4_3:70924816-70924835 | Msa0660250:CDS | 45.0% |
| !! | GAATGTTATCGGCTTTCTGC+CGG | + | chr4_3:70924923-70924942 | None:intergenic | 45.0% |
| ACACAGTGGTTAAGGAAGCA+AGG | - | chr4_3:70925024-70925043 | Msa0660250:intron | 45.0% | |
| ! | CTTTTCGCTATCCTCGCAAA+TGG | - | chr4_3:70925262-70925281 | Msa0660250:intron | 45.0% |
| GGCTTGCAAGCAGAGAATAT+AGG | - | chr4_3:70923172-70923191 | Msa0660250:CDS | 45.0% | |
| AGAGGCAAATGAGTTGCAAG+TGG | - | chr4_3:70923439-70923458 | Msa0660250:intron | 45.0% | |
| ACTGTACTTGTTCTCAGGGA+AGG | - | chr4_3:70923552-70923571 | Msa0660250:intron | 45.0% | |
| AATGCAGCAACCAATTTGGC+AGG | + | chr4_3:70923620-70923639 | None:intergenic | 45.0% | |
| GCCAAATTGGTTGCTGCATT+AGG | - | chr4_3:70923620-70923639 | Msa0660250:intron | 45.0% | |
| AGTTCATCAGAGTCTTGAGG+GGG | + | chr4_3:70923932-70923951 | None:intergenic | 45.0% | |
| TGACCGAGAGTAAGTACTCT+AGG | + | chr4_3:70923963-70923982 | None:intergenic | 45.0% | |
| ! | AGAAGCAAAGACTACCGACT+TGG | + | chr4_3:70924066-70924085 | None:intergenic | 45.0% |
| !! | GTATTTGCAGGTGTTGGCAT+TGG | - | chr4_3:70924112-70924131 | Msa0660250:intron | 45.0% |
| AAGGAGAGCGAGTATTCGTA+AGG | - | chr4_3:70924192-70924211 | Msa0660250:intron | 45.0% | |
| ! | GGCAAAGCTTTTTACAGCAG+AGG | - | chr4_3:70924284-70924303 | Msa0660250:intron | 45.0% |
| AGTAGGTTTCTTGGTCAAGG+CGG | - | chr4_3:70924339-70924358 | Msa0660250:intron | 45.0% | |
| GGTCTTTCCCATGGATATGT+TGG | + | chr4_3:70924581-70924600 | None:intergenic | 45.0% | |
| ATGAATCACGGTCTTTCCCA+TGG | + | chr4_3:70924590-70924609 | None:intergenic | 45.0% | |
| ACCGTGATTCATCCCTTTCA+TGG | - | chr4_3:70924598-70924617 | Msa0660250:intron | 45.0% | |
| CCCATGAAAGGGATGAATCA+CGG | + | chr4_3:70924602-70924621 | None:intergenic | 45.0% | |
| CCGTGATTCATCCCTTTCAT+GGG | - | chr4_3:70924599-70924618 | Msa0660250:intron | 45.0% | |
| AAGGCGACTTTCCCATGAAA+GGG | + | chr4_3:70924613-70924632 | None:intergenic | 45.0% | |
| TAAGGCGACTTTCCCATGAA+AGG | + | chr4_3:70924614-70924633 | None:intergenic | 45.0% | |
| TCGCCTTAGAATTGCATGTG+AGG | - | chr4_3:70924626-70924645 | Msa0660250:intron | 45.0% | |
| AGAATTGCATGTGAGGTTGC+CGG | - | chr4_3:70924633-70924652 | Msa0660250:intron | 45.0% | |
| ATGCATATATGCCACTGCTC+CGG | + | chr4_3:70924655-70924674 | None:intergenic | 45.0% | |
| CTCATTTAACCCACAGCAGT+AGG | - | chr4_3:70924796-70924815 | Msa0660250:CDS | 45.0% | |
| ATTTAACCCACAGCAGTAGG+AGG | - | chr4_3:70924799-70924818 | Msa0660250:CDS | 45.0% | |
| ! | AAAGTACCTCCTACTGCTGT+GGG | + | chr4_3:70924808-70924827 | None:intergenic | 45.0% |
| !! | AAAAGTACCTCCTACTGCTG+TGG | + | chr4_3:70924809-70924828 | None:intergenic | 45.0% |
| !!! | ACAGCAGTAGGAGGTACTTT+TGG | - | chr4_3:70924808-70924827 | Msa0660250:CDS | 45.0% |
| !!! | CAGCAGTAGGAGGTACTTTT+GGG | - | chr4_3:70924809-70924828 | Msa0660250:CDS | 45.0% |
| !!! | AGGAGGTACTTTTGGGTACA+TGG | - | chr4_3:70924816-70924835 | Msa0660250:CDS | 45.0% |
| !! | GAATGTTATCGGCTTTCTGC+CGG | + | chr4_3:70924923-70924942 | None:intergenic | 45.0% |
| ACACAGTGGTTAAGGAAGCA+AGG | - | chr4_3:70925024-70925043 | Msa0660250:intron | 45.0% | |
| ! | CTTTTCGCTATCCTCGCAAA+TGG | - | chr4_3:70925262-70925281 | Msa0660250:intron | 45.0% |
| CGACTAAGATTTCGCTGGTG+AGG | - | chr4_3:70923997-70924016 | Msa0660250:CDS | 50.0% | |
| ATTTCGCTGGTGAGGCAAGA+TGG | - | chr4_3:70924005-70924024 | Msa0660250:CDS | 50.0% | |
| !! | TGGCATTGGTGCAGGCTTTA+TGG | - | chr4_3:70924126-70924145 | Msa0660250:intron | 50.0% |
| TTTCTTGGTCAAGGCGGCTA+TGG | - | chr4_3:70924345-70924364 | Msa0660250:intron | 50.0% | |
| GGCTATGGCACAGTGTACAA+AGG | - | chr4_3:70924360-70924379 | Msa0660250:intron | 50.0% | |
| ACTGCGACTATGGTTCCATC+TGG | + | chr4_3:70924393-70924412 | None:intergenic | 50.0% | |
| GTATGTGGACTCCATTTGCG+AGG | + | chr4_3:70925276-70925295 | None:intergenic | 50.0% | |
| CGACTAAGATTTCGCTGGTG+AGG | - | chr4_3:70923997-70924016 | Msa0660250:CDS | 50.0% | |
| ATTTCGCTGGTGAGGCAAGA+TGG | - | chr4_3:70924005-70924024 | Msa0660250:CDS | 50.0% | |
| !! | TGGCATTGGTGCAGGCTTTA+TGG | - | chr4_3:70924126-70924145 | Msa0660250:intron | 50.0% |
| TTTCTTGGTCAAGGCGGCTA+TGG | - | chr4_3:70924345-70924364 | Msa0660250:intron | 50.0% | |
| GGCTATGGCACAGTGTACAA+AGG | - | chr4_3:70924360-70924379 | Msa0660250:intron | 50.0% | |
| ACTGCGACTATGGTTCCATC+TGG | + | chr4_3:70924393-70924412 | None:intergenic | 50.0% | |
| GTATGTGGACTCCATTTGCG+AGG | + | chr4_3:70925276-70925295 | None:intergenic | 50.0% | |
| TTGCAGCTCTTGCCCCTAAG+AGG | + | chr4_3:70923512-70923531 | None:intergenic | 55.0% | |
| TAGGGGCAAGAGCTGCAAAG+AGG | - | chr4_3:70923514-70923533 | Msa0660250:intron | 55.0% | |
| TCTCAGGGAAGGCTTGCAGA+TGG | - | chr4_3:70923563-70923582 | Msa0660250:intron | 55.0% | |
| TCATCAGAGTCTTGAGGGGG+AGG | + | chr4_3:70923929-70923948 | None:intergenic | 55.0% | |
| TTGCAGCTCTTGCCCCTAAG+AGG | + | chr4_3:70923512-70923531 | None:intergenic | 55.0% | |
| TAGGGGCAAGAGCTGCAAAG+AGG | - | chr4_3:70923514-70923533 | Msa0660250:intron | 55.0% | |
| TCTCAGGGAAGGCTTGCAGA+TGG | - | chr4_3:70923563-70923582 | Msa0660250:intron | 55.0% | |
| TCATCAGAGTCTTGAGGGGG+AGG | + | chr4_3:70923929-70923948 | None:intergenic | 55.0% | |
| AGAGTCTTGAGGGGGAGGAG+GGG | + | chr4_3:70923924-70923943 | None:intergenic | 60.0% | |
| CAGAGTCTTGAGGGGGAGGA+GGG | + | chr4_3:70923925-70923944 | None:intergenic | 60.0% | |
| TCAGAGTCTTGAGGGGGAGG+AGG | + | chr4_3:70923926-70923945 | None:intergenic | 60.0% | |
| !! | GCAGGTGTTGGCATTGGTGC+AGG | - | chr4_3:70924118-70924137 | Msa0660250:intron | 60.0% |
| ATGTGAGGTTGCCGGAGCAG+TGG | - | chr4_3:70924641-70924660 | Msa0660250:intron | 60.0% | |
| AGAGTCTTGAGGGGGAGGAG+GGG | + | chr4_3:70923924-70923943 | None:intergenic | 60.0% | |
| CAGAGTCTTGAGGGGGAGGA+GGG | + | chr4_3:70923925-70923944 | None:intergenic | 60.0% | |
| TCAGAGTCTTGAGGGGGAGG+AGG | + | chr4_3:70923926-70923945 | None:intergenic | 60.0% | |
| !! | GCAGGTGTTGGCATTGGTGC+AGG | - | chr4_3:70924118-70924137 | Msa0660250:intron | 60.0% |
| ATGTGAGGTTGCCGGAGCAG+TGG | - | chr4_3:70924641-70924660 | Msa0660250:intron | 60.0% | |
| TCTTGAGGGGGAGGAGGGGC+TGG | + | chr4_3:70923920-70923939 | None:intergenic | 70.0% | |
| TCTTGAGGGGGAGGAGGGGC+TGG | + | chr4_3:70923920-70923939 | None:intergenic | 70.0% | |
| ! | AGGGGGAGGAGGGGCTGGTG+AGG | + | chr4_3:70923915-70923934 | None:intergenic | 75.0% |
| ! | AGGGGGAGGAGGGGCTGGTG+AGG | + | chr4_3:70923915-70923934 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 70923078 | 70925301 | 70923078 | ID=Msa0660250;Name=Msa0660250 |
| chr4_3 | mRNA | 70923078 | 70925301 | 70923078 | ID=Msa0660250-mRNA-1;Parent=Msa0660250;Name=Msa0660250-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0|0|0.8|0.75|0.8|5|0|264 |
| chr4_3 | exon | 70925299 | 70925301 | 70925299 | ID=Msa0660250-mRNA-1:exon:21181;Parent=Msa0660250-mRNA-1 |
| chr4_3 | exon | 70924738 | 70925002 | 70924738 | ID=Msa0660250-mRNA-1:exon:21180;Parent=Msa0660250-mRNA-1 |
| chr4_3 | exon | 70924209 | 70924257 | 70924209 | ID=Msa0660250-mRNA-1:exon:21179;Parent=Msa0660250-mRNA-1 |
| chr4_3 | exon | 70923961 | 70924125 | 70923961 | ID=Msa0660250-mRNA-1:exon:21178;Parent=Msa0660250-mRNA-1 |
| chr4_3 | exon | 70923078 | 70923390 | 70923078 | ID=Msa0660250-mRNA-1:exon:21177;Parent=Msa0660250-mRNA-1 |
| chr4_3 | CDS | 70925299 | 70925301 | 70925299 | ID=Msa0660250-mRNA-1:cds;Parent=Msa0660250-mRNA-1 |
| chr4_3 | CDS | 70924738 | 70925002 | 70924738 | ID=Msa0660250-mRNA-1:cds;Parent=Msa0660250-mRNA-1 |
| chr4_3 | CDS | 70924209 | 70924257 | 70924209 | ID=Msa0660250-mRNA-1:cds;Parent=Msa0660250-mRNA-1 |
| chr4_3 | CDS | 70923961 | 70924125 | 70923961 | ID=Msa0660250-mRNA-1:cds;Parent=Msa0660250-mRNA-1 |
| chr4_3 | CDS | 70923078 | 70923390 | 70923078 | ID=Msa0660250-mRNA-1:cds;Parent=Msa0660250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
