Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671270 | XP_003605169.2 | 98.225 | 338 | 6 | 0 | 1 | 338 | 1 | 338 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671270 | sp|G7JFU5|ARGI_MEDTR | 98.225 | 338 | 6 | 0 | 1 | 338 | 1 | 338 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671270 | I3SM21 | 81.953 | 338 | 61 | 0 | 1 | 338 | 1 | 338 | 0.0 | 573 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0593190 | Msa0671270 | 0.841359 | 4.984746e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671270 | MtrunA17_Chr4g0011501 | 98.225 | 338 | 6 | 0 | 1 | 338 | 1 | 338 | 0.0 | 681 |
| Msa0671270 | MtrunA17_Chr4g0011481 | 81.953 | 338 | 61 | 0 | 1 | 338 | 1 | 338 | 0.0 | 573 |
| Msa0671270 | MtrunA17_Chr6g0468981 | 51.613 | 372 | 135 | 6 | 1 | 338 | 2 | 362 | 2.98e-113 | 333 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0671270 | AT4G08900.1 | 77.811 | 338 | 72 | 1 | 4 | 338 | 5 | 342 | 0.0 | 542 |
| Msa0671270 | AT4G08870.1 | 73.256 | 344 | 86 | 1 | 1 | 338 | 1 | 344 | 0.0 | 516 |
| Msa0671270 | AT4G08870.2 | 70.155 | 258 | 71 | 1 | 1 | 252 | 1 | 258 | 4.57e-131 | 375 |
Find 72 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGGTTTCTTGGATTAAT+AGG | 0.208436 | 4_4:+14362317 | Msa0671270:three_prime_UTR |
| TCGTGAAAGAGCAAAATTTA+AGG | 0.209150 | 4_4:+14355960 | Msa0671270:CDS |
| AGATACCAGATTCTCTAAAA+TGG | 0.211167 | 4_4:-14361341 | None:intergenic |
| TGTACATGTGTTTGGTTTCT+TGG | 0.231790 | 4_4:+14362308 | Msa0671270:three_prime_UTR |
| TCCATTACGCCCACTAGTTT+TGG | 0.236647 | 4_4:+14360667 | Msa0671270:CDS |
| TCTCTTCTTGGAGTTCCTTT+AGG | 0.238496 | 4_4:+14356317 | Msa0671270:CDS |
| TTTGGTTTCTTGGATTAATA+GGG | 0.272030 | 4_4:+14362318 | Msa0671270:three_prime_UTR |
| GTGGCAACTTCATCTCTTCT+TGG | 0.313901 | 4_4:+14356305 | Msa0671270:CDS |
| CTCGCATTAGGGAAGCAATT+TGG | 0.318454 | 4_4:+14356381 | Msa0671270:CDS |
| CAATCTCGAATTTCTTCAAT+AGG | 0.353376 | 4_4:-14359680 | None:intergenic |
| GATACCAGATTCTCTAAAAT+GGG | 0.370409 | 4_4:-14361340 | None:intergenic |
| GGGAGAACTTATGCGTTCAT+TGG | 0.376166 | 4_4:+14356274 | Msa0671270:intron |
| TGTTTACATGTACATGTGTT+TGG | 0.387166 | 4_4:+14362300 | Msa0671270:three_prime_UTR |
| AACATCCTTCAAAATCTTCA+AGG | 0.391264 | 4_4:+14362135 | Msa0671270:CDS |
| GATCTCTATCATGACTTTGA+AGG | 0.398628 | 4_4:+14360782 | Msa0671270:CDS |
| GAAACTAGGAGAAGGTGTTA+AGG | 0.413428 | 4_4:+14362014 | Msa0671270:intron |
| GGCTCATGGTGAGACACTCC+TGG | 0.416403 | 4_4:-14362084 | None:intergenic |
| TCAGAGACAGCTCTAACAAC+TGG | 0.438314 | 4_4:-14360713 | None:intergenic |
| AAACTAGGAGAAGGTGTTAA+GGG | 0.440611 | 4_4:+14362015 | Msa0671270:CDS |
| CCCTCCATGATTCGAGCAAA+AGG | 0.440647 | 4_4:-14360827 | None:intergenic |
| GACACTCCTGGAGCAATTGA+TGG | 0.445703 | 4_4:-14362072 | None:intergenic |
| CACAAATTCAACAACTGAAG+AGG | 0.449128 | 4_4:+14356412 | Msa0671270:CDS |
| AATCTTCAAGGTGATATTGT+TGG | 0.461168 | 4_4:+14362147 | Msa0671270:CDS |
| GGAGAACTTATGCGTTCATT+GGG | 0.462096 | 4_4:+14356275 | Msa0671270:CDS |
| TTCTTTGGTGTGCAGAAACT+AGG | 0.465960 | 4_4:+14362000 | Msa0671270:intron |
| TCTCGAAATGAAAGGCCTCC+TGG | 0.471037 | 4_4:-14362105 | None:intergenic |
| CTTGACCCATCAATTGCTCC+AGG | 0.476192 | 4_4:+14362066 | Msa0671270:CDS |
| TGCTAAGTTGGTGAGAGAAT+TGG | 0.476269 | 4_4:+14362233 | Msa0671270:CDS |
| TTGAAGAAATTCGAGATTGT+GGG | 0.479007 | 4_4:+14359684 | Msa0671270:CDS |
| ATTGAAGAAATTCGAGATTG+TGG | 0.479153 | 4_4:+14359683 | Msa0671270:CDS |
| CCCAAAACTAGTGGGCGTAA+TGG | 0.487551 | 4_4:-14360668 | None:intergenic |
| TGAGCTTTCTCTAACAAAGC+AGG | 0.497436 | 4_4:-14355904 | None:intergenic |
| CTATGCTCGCAGACTCGTGC+AGG | 0.500093 | 4_4:+14360853 | Msa0671270:CDS |
| CATCATTCATCATTTCATGA+AGG | 0.502786 | 4_4:+14356341 | Msa0671270:CDS |
| AATTTAGTCTCTGCATGTAA+TGG | 0.507098 | 4_4:-14355867 | None:intergenic |
| TCAAAGTCATGATAGAGATC+AGG | 0.512683 | 4_4:-14360779 | None:intergenic |
| CTTCAAGGTGATATTGTTGG+TGG | 0.518458 | 4_4:+14362150 | Msa0671270:CDS |
| CCCACATTTGTTATCACTCG+TGG | 0.518500 | 4_4:-14359650 | None:intergenic |
| TGCTATAGTAGCTGCTAAGT+TGG | 0.522344 | 4_4:+14362221 | Msa0671270:CDS |
| GGAGTGTCTCACCATGAGCC+AGG | 0.524336 | 4_4:+14362087 | Msa0671270:CDS |
| ATCATTCATCATTTCATGAA+GGG | 0.524848 | 4_4:+14356342 | Msa0671270:CDS |
| AGTATATGTTTCAATAGATG+TGG | 0.525382 | 4_4:+14362038 | Msa0671270:CDS |
| GCTGTCTCTGAGAAGCTTGG+AGG | 0.535096 | 4_4:+14360725 | Msa0671270:CDS |
| GCGTTCATTGGGAGGCGTTG+TGG | 0.542855 | 4_4:+14356286 | Msa0671270:CDS |
| GACAGATTCACTAATAACAT+TGG | 0.550347 | 4_4:-14359726 | None:intergenic |
| ATGAAAGGCCTCCTGGCTCA+TGG | 0.551410 | 4_4:-14362098 | None:intergenic |
| CCACAACGTGATACTTATGA+TGG | 0.551598 | 4_4:+14362192 | Msa0671270:CDS |
| AATGATGAATGATGACCTAA+AGG | 0.561016 | 4_4:-14356332 | None:intergenic |
| AGAGCTGTCTCTGAGAAGCT+TGG | 0.569582 | 4_4:+14360722 | Msa0671270:CDS |
| GAACTTATGCGTTCATTGGG+AGG | 0.571127 | 4_4:+14356278 | Msa0671270:CDS |
| ACAAATTCAACAACTGAAGA+GGG | 0.572617 | 4_4:+14356413 | Msa0671270:CDS |
| ACACTCCTGGAGCAATTGAT+GGG | 0.572760 | 4_4:-14362071 | None:intergenic |
| CCCACGAGTGATAACAAATG+TGG | 0.581423 | 4_4:+14359649 | Msa0671270:CDS |
| CCACATTTGTTATCACTCGT+GGG | 0.589776 | 4_4:-14359649 | None:intergenic |
| TGAGAATATCTCGAAATGAA+AGG | 0.591080 | 4_4:-14362113 | None:intergenic |
| TGAAGAAATTCGAGATTGTG+GGG | 0.597482 | 4_4:+14359685 | Msa0671270:CDS |
| TGATATTGTTGGTGGAGATG+TGG | 0.606844 | 4_4:+14362158 | Msa0671270:CDS |
| TGATCACCACCCAAAACTAG+TGG | 0.614466 | 4_4:-14360677 | None:intergenic |
| TGAATCTGTCAAGTTAGTGA+TGG | 0.616383 | 4_4:+14359739 | Msa0671270:CDS |
| TGTCAAGTTAGTGATGGATG+AGG | 0.617326 | 4_4:+14359745 | Msa0671270:CDS |
| GTGTAGAGACACATGAAATG+AGG | 0.620952 | 4_4:+14361299 | Msa0671270:CDS |
| TTTGCTCGAATCATGGAGGG+TGG | 0.630979 | 4_4:+14360830 | Msa0671270:CDS |
| CCATCATAAGTATCACGTTG+TGG | 0.644875 | 4_4:-14362192 | None:intergenic |
| GGTGTGCAGAAACTAGGAGA+AGG | 0.660356 | 4_4:+14362006 | Msa0671270:intron |
| CCACGAGTGATAACAAATGT+GGG | 0.660631 | 4_4:+14359650 | Msa0671270:CDS |
| GATCACCACCCAAAACTAGT+GGG | 0.666821 | 4_4:-14360676 | None:intergenic |
| CAAATTGCTTCCCTAATGCG+AGG | 0.669154 | 4_4:-14356380 | None:intergenic |
| ATACCAGATTCTCTAAAATG+GGG | 0.678087 | 4_4:-14361339 | None:intergenic |
| GTGTCTCACCATGAGCCAGG+AGG | 0.728214 | 4_4:+14362090 | Msa0671270:CDS |
| TAAGTGCAGCATCTATCACA+CGG | 0.730945 | 4_4:-14355930 | None:intergenic |
| ATGTCGACTATAGCACGCAG+AGG | 0.731082 | 4_4:+14355841 | Msa0671270:CDS |
| ATTGCTTCCCTAATGCGAGG+AGG | 0.734038 | 4_4:-14356377 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTGATTTGTTAAAAATAT+AGG | + | chr4_4:14358155-14358174 | Msa0671270:intron | 10.0% |
| !!! | ATTGATTTGTTAAAAATATA+GGG | + | chr4_4:14358156-14358175 | Msa0671270:intron | 10.0% |
| !!! | AATATAACATTTTTTATGTA+TGG | + | chr4_4:14359022-14359041 | Msa0671270:intron | 10.0% |
| !!! | ACAATTTTTTAAGTTTTTTT+AGG | + | chr4_4:14359231-14359250 | Msa0671270:intron | 10.0% |
| !!! | TAAATGTTTTTACAAATAAT+GGG | - | chr4_4:14360256-14360275 | None:intergenic | 10.0% |
| !!! | TTAAATGTTTTTACAAATAA+TGG | - | chr4_4:14360257-14360276 | None:intergenic | 10.0% |
| !! | TAATTAAAAACAAGAATCAT+TGG | - | chr4_4:14356527-14356546 | None:intergenic | 15.0% |
| !!! | CAAAAAATTGTGATATTTTT+TGG | + | chr4_4:14356550-14356569 | Msa0671270:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr4_4:14356912-14356931 | None:intergenic | 15.0% |
| !!! | ATTTTCCTTATATTTTGAAA+CGG | + | chr4_4:14357019-14357038 | Msa0671270:intron | 15.0% |
| !!! | GTATTTATTTTATCTTTGAA+AGG | + | chr4_4:14357089-14357108 | Msa0671270:intron | 15.0% |
| !! | TTAATATAGAAATTATGCAT+TGG | + | chr4_4:14357276-14357295 | Msa0671270:intron | 15.0% |
| !! | TTTATAACTGTATCAAAATA+CGG | - | chr4_4:14357765-14357784 | None:intergenic | 15.0% |
| !!! | AAATGGTTTAAATTTCATTT+TGG | - | chr4_4:14358494-14358513 | None:intergenic | 15.0% |
| !! | CAAATGATTTAATCTTTATT+GGG | + | chr4_4:14358671-14358690 | Msa0671270:intron | 15.0% |
| !! | TTTATAACTGTATCAAAATA+CGG | - | chr4_4:14357765-14357784 | None:intergenic | 15.0% |
| !! | AAAAATGAATTATATTACCA+CGG | - | chr4_4:14359136-14359155 | None:intergenic | 15.0% |
| !! | ATAACAATTACTTGATAAAA+AGG | - | chr4_4:14359182-14359201 | None:intergenic | 15.0% |
| !!! | TATCAAGTAATTGTTATTAA+TGG | + | chr4_4:14359185-14359204 | Msa0671270:intron | 15.0% |
| !!! | ATATTATATGTATTTTTTGC+AGG | + | chr4_4:14359611-14359630 | Msa0671270:intron | 15.0% |
| !!! | GAAAACAAAAAACATTTTTA+TGG | - | chr4_4:14360115-14360134 | None:intergenic | 15.0% |
| !!! | AAATGTTTTTACAAATAATG+GGG | - | chr4_4:14360255-14360274 | None:intergenic | 15.0% |
| !! | ACACAATAATATTTCATTAT+AGG | - | chr4_4:14360523-14360542 | None:intergenic | 15.0% |
| !! | AACCATATAAATATAATAAG+TGG | - | chr4_4:14361001-14361020 | None:intergenic | 15.0% |
| !! | TTACTATCTGTAAAAAAAAA+GGG | - | chr4_4:14361179-14361198 | None:intergenic | 15.0% |
| !! | TTTACTATCTGTAAAAAAAA+AGG | - | chr4_4:14361180-14361199 | None:intergenic | 15.0% |
| !! | TAATACATTTAAATGATTTC+AGG | + | chr4_4:14361225-14361244 | Msa0671270:intron | 15.0% |
| !! | AATGAAGAAGGAAAATATTA+GGG | - | chr4_4:14355991-14356010 | None:intergenic | 20.0% |
| !! | AAATGAAGAAGGAAAATATT+AGG | - | chr4_4:14355992-14356011 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | + | chr4_4:14356089-14356108 | Msa0671270:intron | 20.0% |
| !! | CATTGAATAATTAATGTATC+TGG | - | chr4_4:14356643-14356662 | None:intergenic | 20.0% |
| !! | TATTCAATGTATCTAAAAAG+TGG | + | chr4_4:14356692-14356711 | Msa0671270:intron | 20.0% |
| !! | CAAAATTGAATGAACATTTA+TGG | - | chr4_4:14356831-14356850 | None:intergenic | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | + | chr4_4:14356921-14356940 | Msa0671270:intron | 20.0% |
| !!! | ATAAGGAAAATTCACTTTTT+AGG | - | chr4_4:14357010-14357029 | None:intergenic | 20.0% |
| !!! | TTTAACAAATCGATTTTGTT+TGG | - | chr4_4:14357166-14357185 | None:intergenic | 20.0% |
| !!! | ATCGATTTGTTAAAAACTTT+AGG | + | chr4_4:14357172-14357191 | Msa0671270:intron | 20.0% |
| !!! | TCGATTTGTTAAAAACTTTA+GGG | + | chr4_4:14357173-14357192 | Msa0671270:intron | 20.0% |
| !! | AAAAAAACAGTTGTATAAGT+TGG | + | chr4_4:14357638-14357657 | Msa0671270:intron | 20.0% |
| !! | AAAAAACAGTTGTATAAGTT+GGG | + | chr4_4:14357639-14357658 | Msa0671270:intron | 20.0% |
| !! | TTATAACTGTATCAAAATAC+GGG | - | chr4_4:14357764-14357783 | None:intergenic | 20.0% |
| !! | AAAACAGTTGTATAAAAAAC+AGG | + | chr4_4:14357893-14357912 | Msa0671270:intron | 20.0% |
| !! | TTTATATGCATCATTTCATA+TGG | - | chr4_4:14358132-14358151 | None:intergenic | 20.0% |
| !! | GCAAATGATTTAATCTTTAT+TGG | + | chr4_4:14358670-14358689 | Msa0671270:intron | 20.0% |
| !!! | TTTTGCTCAAAAAAACTATA+AGG | - | chr4_4:14358780-14358799 | None:intergenic | 20.0% |
| !! | ATGGTACATCATAAAAAATA+TGG | + | chr4_4:14358844-14358863 | Msa0671270:intron | 20.0% |
| !! | TGGTACATCATAAAAAATAT+GGG | + | chr4_4:14358845-14358864 | Msa0671270:intron | 20.0% |
| !! | TTATAACTGTATCAAAATAC+GGG | - | chr4_4:14357764-14357783 | None:intergenic | 20.0% |
| !! | AAATATTAATCAACTTGAGT+TGG | + | chr4_4:14359460-14359479 | Msa0671270:intron | 20.0% |
| !!! | CAATTTAAAATGTGTTAGTT+TGG | + | chr4_4:14359553-14359572 | Msa0671270:intron | 20.0% |
| !!! | ATAACAATGTTAAAAGCATA+AGG | - | chr4_4:14359790-14359809 | None:intergenic | 20.0% |
| !! | TCTAATAAAAAATACCAACA+AGG | - | chr4_4:14359988-14360007 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTTTAGAAATAGT+GGG | - | chr4_4:14360024-14360043 | None:intergenic | 20.0% |
| !!! | AAAAAACATTTTTATGGTCT+TGG | - | chr4_4:14360109-14360128 | None:intergenic | 20.0% |
| !!! | TGTTTTCTTAAGTATACTTT+CGG | + | chr4_4:14360128-14360147 | Msa0671270:intron | 20.0% |
| !!! | AATGTTTTTACAAATAATGG+GGG | - | chr4_4:14360254-14360273 | None:intergenic | 20.0% |
| !!! | TTTGAGATCTCAATTTAAAT+TGG | - | chr4_4:14360897-14360916 | None:intergenic | 20.0% |
| !! | CATATAAATATAATAAGTGG+CGG | - | chr4_4:14360998-14361017 | None:intergenic | 20.0% |
| !! | AATGACATAAAAATTAGTGT+AGG | - | chr4_4:14361387-14361406 | None:intergenic | 20.0% |
| !! | AGTGACATAAAAATTAGTAT+AGG | - | chr4_4:14361434-14361453 | None:intergenic | 20.0% |
| !!! | ACTTCTTTTGATGTATTTAA+CGG | + | chr4_4:14361536-14361555 | Msa0671270:intron | 20.0% |
| !! | GATGATAGCTATTTATATTA+AGG | + | chr4_4:14361632-14361651 | Msa0671270:intron | 20.0% |
| !!! | TTCACAATAACAAAATGTTT+TGG | - | chr4_4:14361723-14361742 | None:intergenic | 20.0% |
| ! | TAATTCAGTGTAATCATATG+TGG | - | chr4_4:14356067-14356086 | None:intergenic | 25.0% |
| !! | TATTTTCGTAGGATTAATCT+CGG | + | chr4_4:14356232-14356251 | Msa0671270:intron | 25.0% |
| ! | ATCATTCATCATTTCATGAA+GGG | + | chr4_4:14356342-14356361 | Msa0671270:CDS | 25.0% |
| !!! | GATTTTCTAAAATGTGTTGA+AGG | - | chr4_4:14356866-14356885 | None:intergenic | 25.0% |
| !!! | GGTTTTTTGTTGATATGAAA+TGG | + | chr4_4:14357131-14357150 | Msa0671270:intron | 25.0% |
| !! | ATTTGTTAAAAACTTTAGGG+AGG | + | chr4_4:14357176-14357195 | Msa0671270:intron | 25.0% |
| ! | AGAAATTATGCATTGGAAAT+TGG | + | chr4_4:14357283-14357302 | Msa0671270:intron | 25.0% |
| !!! | GAAAATGCAGTTTTTTCTTT+CGG | - | chr4_4:14357420-14357439 | None:intergenic | 25.0% |
| ! | TATAACTGTATCAAAATACG+GGG | - | chr4_4:14357763-14357782 | None:intergenic | 25.0% |
| !! | TTCTCATTAATTTGATACAC+AGG | + | chr4_4:14357926-14357945 | Msa0671270:intron | 25.0% |
| !!! | TCCATTTTATTTTTTGGTGA+AGG | + | chr4_4:14357993-14358012 | Msa0671270:intron | 25.0% |
| ! | TCCTTCACCAAAAAATAAAA+TGG | - | chr4_4:14357997-14358016 | None:intergenic | 25.0% |
| ! | ATTTCATATGGACAAAAAAG+TGG | - | chr4_4:14358120-14358139 | None:intergenic | 25.0% |
| !!! | GATTTGTTAAAAATATAGGG+AGG | + | chr4_4:14358159-14358178 | Msa0671270:intron | 25.0% |
| ! | AAAAATATAGGGAGGATAAA+AGG | + | chr4_4:14358167-14358186 | Msa0671270:intron | 25.0% |
| ! | AAAATATAGGGAGGATAAAA+GGG | + | chr4_4:14358168-14358187 | Msa0671270:intron | 25.0% |
| ! | GGTACATCATAAAAAATATG+GGG | + | chr4_4:14358846-14358865 | Msa0671270:intron | 25.0% |
| ! | GTACATCATAAAAAATATGG+GGG | + | chr4_4:14358847-14358866 | Msa0671270:intron | 25.0% |
| ! | TATAACTGTATCAAAATACG+GGG | - | chr4_4:14357763-14357782 | None:intergenic | 25.0% |
| ! | TACATAATAAGTCTGTTTGA+TGG | - | chr4_4:14359410-14359429 | None:intergenic | 25.0% |
| ! | ACTCAACTAGTAAAAAACAT+AGG | - | chr4_4:14359853-14359872 | None:intergenic | 25.0% |
| !!! | GTGTTGTTTTTTAGAAATAG+TGG | - | chr4_4:14360025-14360044 | None:intergenic | 25.0% |
| ! | GATAAATTTACGCTAACTTT+AGG | - | chr4_4:14360214-14360233 | None:intergenic | 25.0% |
| ! | AAGATCAAGTGGTTAATTAA+TGG | + | chr4_4:14360452-14360471 | Msa0671270:intron | 25.0% |
| ! | AGCCAATAATGAAGTATATA+GGG | - | chr4_4:14360479-14360498 | None:intergenic | 25.0% |
| ! | AAGCCAATAATGAAGTATAT+AGG | - | chr4_4:14360480-14360499 | None:intergenic | 25.0% |
| ! | TCATTATAGGTGAAGTTTAA+TGG | - | chr4_4:14360510-14360529 | None:intergenic | 25.0% |
| ! | ATTGGAAGATTAACGATTAA+CGG | + | chr4_4:14360951-14360970 | Msa0671270:intron | 25.0% |
| ! | CGCCACTTATTATATTTATA+TGG | + | chr4_4:14360996-14361015 | Msa0671270:intron | 25.0% |
| ! | GATATTACACTATATAGAGA+AGG | - | chr4_4:14361155-14361174 | None:intergenic | 25.0% |
| !! | ACATTTAAATGATTTCAGGT+TGG | + | chr4_4:14361229-14361248 | Msa0671270:intron | 25.0% |
| ! | ACTAGGAAAAGTTAAATGAT+TGG | - | chr4_4:14361606-14361625 | None:intergenic | 25.0% |
| ! | TATATTCATCAAGTGTCTAT+AGG | + | chr4_4:14361691-14361710 | Msa0671270:intron | 25.0% |
| ! | ATATTCATCAAGTGTCTATA+GGG | + | chr4_4:14361692-14361711 | Msa0671270:intron | 25.0% |
| ! | ATGAAATTTAGTGCTTTCTT+TGG | + | chr4_4:14361958-14361977 | Msa0671270:intron | 25.0% |
| !! | GTAACCTTGAAAATTTTCTT+TGG | + | chr4_4:14361985-14362004 | Msa0671270:intron | 25.0% |
| ! | AGTATATGTTTCAATAGATG+TGG | + | chr4_4:14362038-14362057 | Msa0671270:CDS | 25.0% |
| !! | TTTGGTTTCTTGGATTAATA+GGG | + | chr4_4:14362318-14362337 | Msa0671270:three_prime_UTR | 25.0% |
| AATTTAGTCTCTGCATGTAA+TGG | - | chr4_4:14355870-14355889 | None:intergenic | 30.0% | |
| TCGTGAAAGAGCAAAATTTA+AGG | + | chr4_4:14355960-14355979 | Msa0671270:CDS | 30.0% | |
| AGATTGCAACAAAATGAAGA+AGG | - | chr4_4:14356003-14356022 | None:intergenic | 30.0% | |
| AATGATGAATGATGACCTAA+AGG | - | chr4_4:14356335-14356354 | None:intergenic | 30.0% | |
| CATCATTCATCATTTCATGA+AGG | + | chr4_4:14356341-14356360 | Msa0671270:CDS | 30.0% | |
| ACAAATTCAACAACTGAAGA+GGG | + | chr4_4:14356413-14356432 | Msa0671270:CDS | 30.0% | |
| ATATACAAGACAAAGGGAAA+CGG | - | chr4_4:14356448-14356467 | None:intergenic | 30.0% | |
| TAGAGGATATACAAGACAAA+GGG | - | chr4_4:14356454-14356473 | None:intergenic | 30.0% | |
| ! | ATTGTTTGTTAAGATGCTAG+AGG | - | chr4_4:14356471-14356490 | None:intergenic | 30.0% |
| TCCAAAAGAATCATTAGAGT+CGG | + | chr4_4:14356501-14356520 | Msa0671270:intron | 30.0% | |
| GATACACGAGACAAAATATA+TGG | + | chr4_4:14356572-14356591 | Msa0671270:intron | 30.0% | |
| ! | CTTTTGCTTATAATAGTGAC+CGG | - | chr4_4:14356716-14356735 | None:intergenic | 30.0% |
| ! | CTTTTGCTTATAATAGTGAC+CGG | + | chr4_4:14356716-14356735 | Msa0671270:intron | 30.0% |
| !!! | GGAGTACTCATTTTTTAATG+AGG | + | chr4_4:14356741-14356760 | Msa0671270:intron | 30.0% |
| TGTATCAACATTTCAGCATA+TGG | + | chr4_4:14356768-14356787 | Msa0671270:intron | 30.0% | |
| GTATCAACATTTCAGCATAT+GGG | + | chr4_4:14356769-14356788 | Msa0671270:intron | 30.0% | |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr4_4:14356908-14356927 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr4_4:14356909-14356928 | None:intergenic | 30.0% |
| CATTCATTTAATGATGCATG+TGG | - | chr4_4:14356985-14357004 | None:intergenic | 30.0% | |
| !!! | TTCCTTATATTTTGAAACGG+AGG | + | chr4_4:14357022-14357041 | Msa0671270:intron | 30.0% |
| !!! | TCCTTATATTTTGAAACGGA+GGG | + | chr4_4:14357023-14357042 | Msa0671270:intron | 30.0% |
| GGATGCATTTGAAAATTTCA+TGG | + | chr4_4:14357110-14357129 | Msa0671270:intron | 30.0% | |
| ! | AAACTTTAGGGAGGATAAAA+CGG | + | chr4_4:14357185-14357204 | Msa0671270:intron | 30.0% |
| ! | ATCCATGAACACTTTTATCT+AGG | - | chr4_4:14357468-14357487 | None:intergenic | 30.0% |
| ! | TTCTGAAGAAGAACTTAAGT+TGG | - | chr4_4:14357828-14357847 | None:intergenic | 30.0% |
| AGTTCTTCTTCAGAATGATA+TGG | + | chr4_4:14357833-14357852 | Msa0671270:intron | 30.0% | |
| !!! | TGGGCTTCCATTTTATTTTT+TGG | + | chr4_4:14357987-14358006 | Msa0671270:intron | 30.0% |
| !!! | ATTTTTTGGTGAAGGACATA+AGG | + | chr4_4:14358001-14358020 | Msa0671270:intron | 30.0% |
| !!! | TTTTTTGGTGAAGGACATAA+GGG | + | chr4_4:14358002-14358021 | Msa0671270:intron | 30.0% |
| TTTCAAAGATCAAAAGGGAA+AGG | - | chr4_4:14358072-14358091 | None:intergenic | 30.0% | |
| ! | TTTCCCTTTTGATCTTTGAA+AGG | + | chr4_4:14358071-14358090 | Msa0671270:intron | 30.0% |
| AAGGTGCATTTGAAAAATCA+TGG | + | chr4_4:14358090-14358109 | Msa0671270:intron | 30.0% | |
| AAATATAGGGAGGATAAAAG+GGG | + | chr4_4:14358169-14358188 | Msa0671270:intron | 30.0% | |
| ! | AAATCTGCATTTTTCGTCTA+CGG | + | chr4_4:14358214-14358233 | Msa0671270:intron | 30.0% |
| AAACTATAAGGTTGTTCACA+TGG | - | chr4_4:14358768-14358787 | None:intergenic | 30.0% | |
| ! | CATAAACAAAGAGTACATAG+TGG | + | chr4_4:14358821-14358840 | Msa0671270:intron | 30.0% |
| ! | TTCTGAAGAAGAACTTAAGT+TGG | - | chr4_4:14357828-14357847 | None:intergenic | 30.0% |
| AGTTCTTCTTCAGAATGATA+TGG | + | chr4_4:14357833-14357852 | Msa0671270:intron | 30.0% | |
| !!! | TTTAAGTTTTTTTAGGCCTG+AGG | + | chr4_4:14359238-14359257 | Msa0671270:intron | 30.0% |
| !!! | ATATGTATTTTTTGCAGGCA+AGG | + | chr4_4:14359616-14359635 | Msa0671270:intron | 30.0% |
| CAATCTCGAATTTCTTCAAT+AGG | - | chr4_4:14359683-14359702 | None:intergenic | 30.0% | |
| ATTGAAGAAATTCGAGATTG+TGG | + | chr4_4:14359683-14359702 | Msa0671270:CDS | 30.0% | |
| TTGAAGAAATTCGAGATTGT+GGG | + | chr4_4:14359684-14359703 | Msa0671270:CDS | 30.0% | |
| GACAGATTCACTAATAACAT+TGG | - | chr4_4:14359729-14359748 | None:intergenic | 30.0% | |
| !!! | TGTTTTTTAGAAATAGTGGG+TGG | - | chr4_4:14360021-14360040 | None:intergenic | 30.0% |
| TAAAAAACAACACATGTGTC+CGG | + | chr4_4:14360032-14360051 | Msa0671270:intron | 30.0% | |
| CGCTTCTGCATTATAATATA+TGG | - | chr4_4:14360180-14360199 | None:intergenic | 30.0% | |
| ATAAATGTTTCCACCTTGTT+CGG | - | chr4_4:14360296-14360315 | None:intergenic | 30.0% | |
| GTCCCTATATACTTCATTAT+TGG | + | chr4_4:14360474-14360493 | Msa0671270:intron | 30.0% | |
| CACATGAATAATCATGTTTC+TGG | + | chr4_4:14360582-14360601 | Msa0671270:intron | 30.0% | |
| TTGTTCGAACTAGACATATA+AGG | + | chr4_4:14360612-14360631 | Msa0671270:intron | 30.0% | |
| AATTGTGTCTACATTCTTTC+AGG | + | chr4_4:14360643-14360662 | Msa0671270:intron | 30.0% | |
| ATTTGTGAGACAGATACAAT+TGG | + | chr4_4:14360933-14360952 | Msa0671270:intron | 30.0% | |
| ATATGGTTTAGTAACACGAT+TGG | + | chr4_4:14361013-14361032 | Msa0671270:intron | 30.0% | |
| !! | ATACCAGATTCTCTAAAATG+GGG | - | chr4_4:14361342-14361361 | None:intergenic | 30.0% |
| !! | GATACCAGATTCTCTAAAAT+GGG | - | chr4_4:14361343-14361362 | None:intergenic | 30.0% |
| ! | AGATACCAGATTCTCTAAAA+TGG | - | chr4_4:14361344-14361363 | None:intergenic | 30.0% |
| TAGCTATCATCATATGTACT+AGG | - | chr4_4:14361623-14361642 | None:intergenic | 30.0% | |
| TTCAAACATGTACTCCTATA+TGG | - | chr4_4:14361670-14361689 | None:intergenic | 30.0% | |
| ! | TTTTGACATCAAATCTGACA+TGG | + | chr4_4:14361836-14361855 | Msa0671270:intron | 30.0% |
| ! | CACACCAAAGAAAATTTTCA+AGG | - | chr4_4:14361992-14362011 | None:intergenic | 30.0% |
| TGAGAATATCTCGAAATGAA+AGG | - | chr4_4:14362116-14362135 | None:intergenic | 30.0% | |
| AACATCCTTCAAAATCTTCA+AGG | + | chr4_4:14362135-14362154 | Msa0671270:CDS | 30.0% | |
| ! | TATCACCTTGAAGATTTTGA+AGG | - | chr4_4:14362143-14362162 | None:intergenic | 30.0% |
| AATCTTCAAGGTGATATTGT+TGG | + | chr4_4:14362147-14362166 | Msa0671270:CDS | 30.0% | |
| TGTTTACATGTACATGTGTT+TGG | + | chr4_4:14362300-14362319 | Msa0671270:three_prime_UTR | 30.0% | |
| ! | GTTTGGTTTCTTGGATTAAT+AGG | + | chr4_4:14362317-14362336 | Msa0671270:three_prime_UTR | 30.0% |
| GAGAGATATCAACTTCAAAG+TGG | + | chr4_4:14356201-14356220 | Msa0671270:intron | 35.0% | |
| !! | TGGATCTCAGTTATTTTCGT+AGG | + | chr4_4:14356221-14356240 | Msa0671270:intron | 35.0% |
| CACAAATTCAACAACTGAAG+AGG | + | chr4_4:14356412-14356431 | Msa0671270:CDS | 35.0% | |
| CTAGAGGATATACAAGACAA+AGG | - | chr4_4:14356455-14356474 | None:intergenic | 35.0% | |
| AATATATGGTATACTCCCTC+CGG | + | chr4_4:14356586-14356605 | Msa0671270:intron | 35.0% | |
| TAAAAAATGAGTACTCCCTC+CGG | - | chr4_4:14356738-14356757 | None:intergenic | 35.0% | |
| !!! | TCCTCTTTTTTTGTTGGTGA+AGG | + | chr4_4:14356794-14356813 | Msa0671270:intron | 35.0% |
| TCCTTCACCAACAAAAAAAG+AGG | - | chr4_4:14356798-14356817 | None:intergenic | 35.0% | |
| !! | TTTTGTTGGTGAAGGATATC+AGG | + | chr4_4:14356802-14356821 | Msa0671270:intron | 35.0% |
| ! | TTTGTTGGTGAAGGATATCA+GGG | + | chr4_4:14356803-14356822 | Msa0671270:intron | 35.0% |
| ! | TCTAAAATGTGTTGAAGGAG+AGG | - | chr4_4:14356861-14356880 | None:intergenic | 35.0% |
| GATGCATGTGGTTCATAATA+TGG | - | chr4_4:14356973-14356992 | None:intergenic | 35.0% | |
| TCCCTCCGTTTCAAAATATA+AGG | - | chr4_4:14356904-14356923 | None:intergenic | 35.0% | |
| ! | AACTTTAGGGAGGATAAAAC+GGG | + | chr4_4:14357186-14357205 | Msa0671270:intron | 35.0% |
| CATTGGAAATTGGTGAAAAG+TGG | + | chr4_4:14357293-14357312 | Msa0671270:intron | 35.0% | |
| !! | CTCCTAGATAAAAGTGTTCA+TGG | + | chr4_4:14357463-14357482 | Msa0671270:intron | 35.0% |
| ! | AGCAAAAAGTCGCATTTTCA+AGG | + | chr4_4:14357499-14357518 | Msa0671270:intron | 35.0% |
| CAACTATAAGGTTGTTCACA+TGG | - | chr4_4:14357736-14357755 | None:intergenic | 35.0% | |
| !! | AAGAAGAACTTAAGTTGGCA+CGG | - | chr4_4:14357823-14357842 | None:intergenic | 35.0% |
| TATCGACACTTCAGCAATAT+GGG | + | chr4_4:14357968-14357987 | Msa0671270:intron | 35.0% | |
| GCACCTTTCAAAGATCAAAA+GGG | - | chr4_4:14358077-14358096 | None:intergenic | 35.0% | |
| TGCACCTTTCAAAGATCAAA+AGG | - | chr4_4:14358078-14358097 | None:intergenic | 35.0% | |
| GAGAAAAAGTTGCATTTCCA+AGG | + | chr4_4:14358287-14358306 | Msa0671270:intron | 35.0% | |
| ATTTCCAAGGTTCAAACCTT+TGG | + | chr4_4:14358300-14358319 | Msa0671270:intron | 35.0% | |
| TTCAAACCTTTGGATAGATG+CGG | + | chr4_4:14358310-14358329 | Msa0671270:intron | 35.0% | |
| TGAACCGTACAAACATATTG+AGG | + | chr4_4:14358467-14358486 | Msa0671270:intron | 35.0% | |
| TGGACCTCAATATGTTTGTA+CGG | - | chr4_4:14358474-14358493 | None:intergenic | 35.0% | |
| ! | AACAAAGAGTACATAGTGGA+TGG | + | chr4_4:14358825-14358844 | Msa0671270:intron | 35.0% |
| !! | AAGAAGAACTTAAGTTGGCA+CGG | - | chr4_4:14357823-14357842 | None:intergenic | 35.0% |
| TGATCTTTCCGTAATTGTCT+TGG | + | chr4_4:14359081-14359100 | Msa0671270:intron | 35.0% | |
| AAGATGTGCCAAGACAATTA+CGG | - | chr4_4:14359092-14359111 | None:intergenic | 35.0% | |
| !!! | ATCAACTTGAGTTGGTTTTG+TGG | + | chr4_4:14359468-14359487 | Msa0671270:intron | 35.0% |
| ! | TTTTTGCAGGCAAGGATTTA+CGG | + | chr4_4:14359624-14359643 | Msa0671270:intron | 35.0% |
| TGAAGAAATTCGAGATTGTG+GGG | + | chr4_4:14359685-14359704 | Msa0671270:CDS | 35.0% | |
| TGAATCTGTCAAGTTAGTGA+TGG | + | chr4_4:14359739-14359758 | Msa0671270:CDS | 35.0% | |
| ! | GTCAACAAGTTTTTCCTTGT+TGG | + | chr4_4:14359971-14359990 | Msa0671270:intron | 35.0% |
| !! | TTAGAAATAGTGGGTGGAAA+AGG | - | chr4_4:14360015-14360034 | None:intergenic | 35.0% |
| ! | CCTATTTAAGAGCATAGTTC+CGG | - | chr4_4:14360054-14360073 | None:intergenic | 35.0% |
| ATACTTTCGGATACATGTTG+AGG | + | chr4_4:14360141-14360160 | Msa0671270:intron | 35.0% | |
| TAAATGTTTCCACCTTGTTC+GGG | - | chr4_4:14360295-14360314 | None:intergenic | 35.0% | |
| ! | TCTGACTTGACAAATGACAA+TGG | + | chr4_4:14360357-14360376 | Msa0671270:intron | 35.0% |
| AGGCAAAACCATTATAGAGA+CGG | - | chr4_4:14360421-14360440 | None:intergenic | 35.0% | |
| !! | CTCTATAATGGTTTTGCCTA+TGG | + | chr4_4:14360422-14360441 | Msa0671270:intron | 35.0% |
| TCAAAGTCATGATAGAGATC+AGG | - | chr4_4:14360782-14360801 | None:intergenic | 35.0% | |
| GATCTCTATCATGACTTTGA+AGG | + | chr4_4:14360782-14360801 | Msa0671270:CDS | 35.0% | |
| CGTGAGCAAGTCAAAAAATT+TGG | + | chr4_4:14361277-14361296 | Msa0671270:CDS | 35.0% | |
| !! | AAACTAGGAGAAGGTGTTAA+GGG | + | chr4_4:14362015-14362034 | Msa0671270:CDS | 35.0% |
| ! | TGTACATGTGTTTGGTTTCT+TGG | + | chr4_4:14362308-14362327 | Msa0671270:three_prime_UTR | 35.0% |
| TGAGCTTTCTCTAACAAAGC+AGG | - | chr4_4:14355907-14355926 | None:intergenic | 40.0% | |
| TAAGTGCAGCATCTATCACA+CGG | - | chr4_4:14355933-14355952 | None:intergenic | 40.0% | |
| TAACTTATGACGCACAGACA+CGG | - | chr4_4:14356139-14356158 | None:intergenic | 40.0% | |
| TTGATATCTCTCGACAACGA+GGG | - | chr4_4:14356193-14356212 | None:intergenic | 40.0% | |
| ! | GCAGTTGACTTTGTAATGCA+GGG | + | chr4_4:14356254-14356273 | Msa0671270:intron | 40.0% |
| GGAGAACTTATGCGTTCATT+GGG | + | chr4_4:14356275-14356294 | Msa0671270:CDS | 40.0% | |
| TCTCTTCTTGGAGTTCCTTT+AGG | + | chr4_4:14356317-14356336 | Msa0671270:CDS | 40.0% | |
| !! | GCCGACTCTAATGATTCTTT+TGG | - | chr4_4:14356505-14356524 | None:intergenic | 40.0% |
| TGCTTATAATAGTGACCGGA+GGG | - | chr4_4:14356720-14356739 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr4_4:14356719-14356738 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr4_4:14356719-14356738 | Msa0671270:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr4_4:14356720-14356739 | Msa0671270:intron | 40.0% | |
| !!! | TGGGCTTCCTCTTTTTTTGT+TGG | + | chr4_4:14356788-14356807 | Msa0671270:intron | 40.0% |
| ! | GAGGGAGTACATTCTTAGAA+AGG | + | chr4_4:14357041-14357060 | Msa0671270:intron | 40.0% |
| GGAGTACATTCTTAGAAAGG+CGG | + | chr4_4:14357044-14357063 | Msa0671270:intron | 40.0% | |
| AAATGCTAACTAGTGCCTCA+AGG | + | chr4_4:14357237-14357256 | Msa0671270:intron | 40.0% | |
| AATGCTAACTAGTGCCTCAA+GGG | + | chr4_4:14357238-14357257 | Msa0671270:intron | 40.0% | |
| TATCCTTAACCATTGCCCTT+AGG | + | chr4_4:14357378-14357397 | Msa0671270:intron | 40.0% | |
| TTTGCTAACCAGTGTCCTAA+GGG | - | chr4_4:14357396-14357415 | None:intergenic | 40.0% | |
| ! | TTTTGCTAACCAGTGTCCTA+AGG | - | chr4_4:14357397-14357416 | None:intergenic | 40.0% |
| AACTGTATCAAAATACGGGG+TGG | - | chr4_4:14357760-14357779 | None:intergenic | 40.0% | |
| ! | GTATCGACACTTCAGCAATA+TGG | + | chr4_4:14357967-14357986 | Msa0671270:intron | 40.0% |
| AGATCAAAAGGGAAAGGTTG+AGG | - | chr4_4:14358066-14358085 | None:intergenic | 40.0% | |
| CTATCCAAAGGTTTGAACCT+TGG | - | chr4_4:14358307-14358326 | None:intergenic | 40.0% | |
| AAAATGCCGCATCTATCCAA+AGG | - | chr4_4:14358319-14358338 | None:intergenic | 40.0% | |
| AACTGTATCAAAATACGGGG+TGG | - | chr4_4:14357760-14357779 | None:intergenic | 40.0% | |
| ! | TTTTGCAGGCAAGGATTTAC+GGG | + | chr4_4:14359625-14359644 | Msa0671270:intron | 40.0% |
| !! | CCACATTTGTTATCACTCGT+GGG | - | chr4_4:14359652-14359671 | None:intergenic | 40.0% |
| CCACGAGTGATAACAAATGT+GGG | + | chr4_4:14359650-14359669 | Msa0671270:CDS | 40.0% | |
| !! | TGTCAAGTTAGTGATGGATG+AGG | + | chr4_4:14359745-14359764 | Msa0671270:CDS | 40.0% |
| CCGGAACTATGCTCTTAAAT+AGG | + | chr4_4:14360051-14360070 | Msa0671270:intron | 40.0% | |
| ACTTGACAAATGACAATGGC+AGG | + | chr4_4:14360361-14360380 | Msa0671270:intron | 40.0% | |
| ATGACAATGGCAGGTAACTT+TGG | + | chr4_4:14360370-14360389 | Msa0671270:intron | 40.0% | |
| TATAGAGACGGATACCACTT+TGG | - | chr4_4:14360409-14360428 | None:intergenic | 40.0% | |
| AGTGGTATCCGTCTCTATAA+TGG | + | chr4_4:14360410-14360429 | Msa0671270:intron | 40.0% | |
| CTTGATCTTGTCAAAGCCAT+AGG | - | chr4_4:14360441-14360460 | None:intergenic | 40.0% | |
| !! | ATGGCTTTGACAAGATCAAG+TGG | + | chr4_4:14360441-14360460 | Msa0671270:intron | 40.0% |
| ! | TTCTCCTTTTGCTCGAATCA+TGG | + | chr4_4:14360823-14360842 | Msa0671270:CDS | 40.0% |
| GTGTAGAGACACATGAAATG+AGG | + | chr4_4:14361299-14361318 | Msa0671270:CDS | 40.0% | |
| GGTACATGATCAAGCCATAT+AGG | + | chr4_4:14361653-14361672 | Msa0671270:intron | 40.0% | |
| ! | TTCTTTGGTGTGCAGAAACT+AGG | + | chr4_4:14362000-14362019 | Msa0671270:intron | 40.0% |
| !! | GAAACTAGGAGAAGGTGTTA+AGG | + | chr4_4:14362014-14362033 | Msa0671270:intron | 40.0% |
| CTTCAAGGTGATATTGTTGG+TGG | + | chr4_4:14362150-14362169 | Msa0671270:CDS | 40.0% | |
| ! | TGATATTGTTGGTGGAGATG+TGG | + | chr4_4:14362158-14362177 | Msa0671270:CDS | 40.0% |
| CCATCATAAGTATCACGTTG+TGG | - | chr4_4:14362195-14362214 | None:intergenic | 40.0% | |
| CCACAACGTGATACTTATGA+TGG | + | chr4_4:14362192-14362211 | Msa0671270:CDS | 40.0% | |
| TGCTATAGTAGCTGCTAAGT+TGG | + | chr4_4:14362221-14362240 | Msa0671270:CDS | 40.0% | |
| !! | TGCTAAGTTGGTGAGAGAAT+TGG | + | chr4_4:14362233-14362252 | Msa0671270:CDS | 40.0% |
| GTTGATATCTCTCGACAACG+AGG | - | chr4_4:14356194-14356213 | None:intergenic | 45.0% | |
| ! | GGCAGTTGACTTTGTAATGC+AGG | + | chr4_4:14356253-14356272 | Msa0671270:intron | 45.0% |
| GGGAGAACTTATGCGTTCAT+TGG | + | chr4_4:14356274-14356293 | Msa0671270:intron | 45.0% | |
| GAACTTATGCGTTCATTGGG+AGG | + | chr4_4:14356278-14356297 | Msa0671270:CDS | 45.0% | |
| GTGGCAACTTCATCTCTTCT+TGG | + | chr4_4:14356305-14356324 | Msa0671270:CDS | 45.0% | |
| ! | TTTTGCACCTCCTCGCATTA+GGG | + | chr4_4:14356370-14356389 | Msa0671270:CDS | 45.0% |
| CAAATTGCTTCCCTAATGCG+AGG | - | chr4_4:14356383-14356402 | None:intergenic | 45.0% | |
| CTCGCATTAGGGAAGCAATT+TGG | + | chr4_4:14356381-14356400 | Msa0671270:CDS | 45.0% | |
| CAAGACAAAGGGAAACGGTA+TGG | - | chr4_4:14356443-14356462 | None:intergenic | 45.0% | |
| CTTCTTAACCATTGCCCTTG+AGG | - | chr4_4:14357255-14357274 | None:intergenic | 45.0% | |
| TGTCCTAAGGGCAATGGTTA+AGG | - | chr4_4:14357384-14357403 | None:intergenic | 45.0% | |
| ATACGGGGTGGACAACTATA+AGG | - | chr4_4:14357748-14357767 | None:intergenic | 45.0% | |
| AAAGGGAAAGGTTGAGGAAG+TGG | - | chr4_4:14358060-14358079 | None:intergenic | 45.0% | |
| ATACGGGGTGGACAACTATA+AGG | - | chr4_4:14357748-14357767 | None:intergenic | 45.0% | |
| TGTTGTCAAAGCCAGCCAAA+GGG | - | chr4_4:14359285-14359304 | None:intergenic | 45.0% | |
| TTGTTGTCAAAGCCAGCCAA+AGG | - | chr4_4:14359286-14359305 | None:intergenic | 45.0% | |
| CCCACGAGTGATAACAAATG+TGG | + | chr4_4:14359649-14359668 | Msa0671270:CDS | 45.0% | |
| !! | CCCACATTTGTTATCACTCG+TGG | - | chr4_4:14359653-14359672 | None:intergenic | 45.0% |
| CTTGTTGACGAGTGAAAGTG+AGG | - | chr4_4:14359960-14359979 | None:intergenic | 45.0% | |
| CTTTCGGATACATGTTGAGG+TGG | + | chr4_4:14360144-14360163 | Msa0671270:intron | 45.0% | |
| CTCATTCTCTCGCGTCTATA+TGG | - | chr4_4:14360319-14360338 | None:intergenic | 45.0% | |
| CATATAGACGCGAGAGAATG+AGG | + | chr4_4:14360317-14360336 | Msa0671270:intron | 45.0% | |
| ATACCACTTTGGCGCTATTG+TGG | - | chr4_4:14360398-14360417 | None:intergenic | 45.0% | |
| !! | TCCATTACGCCCACTAGTTT+TGG | + | chr4_4:14360667-14360686 | Msa0671270:CDS | 45.0% |
| !!! | CCATTACGCCCACTAGTTTT+GGG | + | chr4_4:14360668-14360687 | Msa0671270:CDS | 45.0% |
| GATCACCACCCAAAACTAGT+GGG | - | chr4_4:14360679-14360698 | None:intergenic | 45.0% | |
| TGATCACCACCCAAAACTAG+TGG | - | chr4_4:14360680-14360699 | None:intergenic | 45.0% | |
| ! | TCAGAGACAGCTCTAACAAC+TGG | - | chr4_4:14360716-14360735 | None:intergenic | 45.0% |
| ! | TCCTTTTGCTCGAATCATGG+AGG | + | chr4_4:14360826-14360845 | Msa0671270:CDS | 45.0% |
| ! | CCTTTTGCTCGAATCATGGA+GGG | + | chr4_4:14360827-14360846 | Msa0671270:CDS | 45.0% |
| !! | TCGCCCCATTTTAGAGAATC+TGG | + | chr4_4:14361336-14361355 | Msa0671270:CDS | 45.0% |
| ACACTCCTGGAGCAATTGAT+GGG | - | chr4_4:14362074-14362093 | None:intergenic | 45.0% | |
| !! | ATTATTATGAATTTAAAAAA+TGG | - | chr4_4:14358511-14358530 | None:intergenic | 5.0% |
| !! | AATTTATAAAATATTATCTA+CGG | - | chr4_4:14357692-14357711 | None:intergenic | 5.0% |
| !!! | TTAGTTATTTTTTATTTTTT+TGG | + | chr4_4:14359873-14359892 | Msa0671270:intron | 5.0% |
| !! | TACAAAAAAAAAAAAATTAT+TGG | + | chr4_4:14361887-14361906 | Msa0671270:intron | 5.0% |
| !! | ACAAAAAAAAAAAAATTATT+GGG | + | chr4_4:14361888-14361907 | Msa0671270:intron | 5.0% |
| ! | ATGTCGACTATAGCACGCAG+AGG | + | chr4_4:14355841-14355860 | Msa0671270:CDS | 50.0% |
| ! | CTTTTGCACCTCCTCGCATT+AGG | + | chr4_4:14356369-14356388 | Msa0671270:CDS | 50.0% |
| ATTGCTTCCCTAATGCGAGG+AGG | - | chr4_4:14356380-14356399 | None:intergenic | 50.0% | |
| ! | ACGGAGGGAGTACATCTAGA+CGG | - | chr4_4:14356893-14356912 | None:intergenic | 50.0% |
| AACTAGTGCCTCAAGGGCAA+TGG | + | chr4_4:14357244-14357263 | Msa0671270:intron | 50.0% | |
| AACCATTGCCCTTAGGACAC+TGG | + | chr4_4:14357385-14357404 | Msa0671270:intron | 50.0% | |
| AACCAGTGTCCTAAGGGCAA+TGG | - | chr4_4:14357390-14357409 | None:intergenic | 50.0% | |
| TGCGACAATTACGAAGTCCG+TGG | + | chr4_4:14359116-14359135 | Msa0671270:intron | 50.0% | |
| ! | AGGCCTGAGGTGATTTGTCT+AGG | + | chr4_4:14359251-14359270 | Msa0671270:intron | 50.0% |
| CCTCCTAGACAAATCACCTC+AGG | - | chr4_4:14359257-14359276 | None:intergenic | 50.0% | |
| ! | CCTGAGGTGATTTGTCTAGG+AGG | + | chr4_4:14359254-14359273 | Msa0671270:intron | 50.0% |
| TCAAAGCCAGCCAAAGGGTA+AGG | - | chr4_4:14359280-14359299 | None:intergenic | 50.0% | |
| CGAATTTACCCACCCGAACA+AGG | + | chr4_4:14360280-14360299 | Msa0671270:intron | 50.0% | |
| ATTTACCCACCCGAACAAGG+TGG | + | chr4_4:14360283-14360302 | Msa0671270:intron | 50.0% | |
| TGTTTCCACCTTGTTCGGGT+GGG | - | chr4_4:14360291-14360310 | None:intergenic | 50.0% | |
| ATGTTTCCACCTTGTTCGGG+TGG | - | chr4_4:14360292-14360311 | None:intergenic | 50.0% | |
| TCAAGTCAGAGTGTGTCACG+TGG | - | chr4_4:14360347-14360366 | None:intergenic | 50.0% | |
| ! | CCCAAAACTAGTGGGCGTAA+TGG | - | chr4_4:14360671-14360690 | None:intergenic | 50.0% |
| !!! | TTACGCCCACTAGTTTTGGG+TGG | + | chr4_4:14360671-14360690 | Msa0671270:CDS | 50.0% |
| ! | AGAGCTGTCTCTGAGAAGCT+TGG | + | chr4_4:14360722-14360741 | Msa0671270:CDS | 50.0% |
| CCCTCCATGATTCGAGCAAA+AGG | - | chr4_4:14360830-14360849 | None:intergenic | 50.0% | |
| TTTGCTCGAATCATGGAGGG+TGG | + | chr4_4:14360830-14360849 | Msa0671270:CDS | 50.0% | |
| GGTGTGCAGAAACTAGGAGA+AGG | + | chr4_4:14362006-14362025 | Msa0671270:intron | 50.0% | |
| CTTGACCCATCAATTGCTCC+AGG | + | chr4_4:14362066-14362085 | Msa0671270:CDS | 50.0% | |
| GACACTCCTGGAGCAATTGA+TGG | - | chr4_4:14362075-14362094 | None:intergenic | 50.0% | |
| TCTCGAAATGAAAGGCCTCC+TGG | - | chr4_4:14362108-14362127 | None:intergenic | 50.0% | |
| TCTCTCGACAACGAGGGACT+GGG | - | chr4_4:14356187-14356206 | None:intergenic | 55.0% | |
| ATCTCTCGACAACGAGGGAC+TGG | - | chr4_4:14356188-14356207 | None:intergenic | 55.0% | |
| GTCTAGGAGGCCTTACCCTT+TGG | + | chr4_4:14359267-14359286 | Msa0671270:intron | 55.0% | |
| ! | GCTGTCTCTGAGAAGCTTGG+AGG | + | chr4_4:14360725-14360744 | Msa0671270:CDS | 55.0% |
| ATGAAAGGCCTCCTGGCTCA+TGG | - | chr4_4:14362101-14362120 | None:intergenic | 55.0% | |
| TCTCGACAACGAGGGACTGG+GGG | - | chr4_4:14356185-14356204 | None:intergenic | 60.0% | |
| CTCTCGACAACGAGGGACTG+GGG | - | chr4_4:14356186-14356205 | None:intergenic | 60.0% | |
| !! | GCGTTCATTGGGAGGCGTTG+TGG | + | chr4_4:14356286-14356305 | Msa0671270:CDS | 60.0% |
| AGGAGGCCTTACCCTTTGGC+TGG | + | chr4_4:14359271-14359290 | Msa0671270:intron | 60.0% | |
| GCGCCACAATAGCGCCAAAG+TGG | + | chr4_4:14360392-14360411 | Msa0671270:intron | 60.0% | |
| CTATGCTCGCAGACTCGTGC+AGG | + | chr4_4:14360853-14360872 | Msa0671270:CDS | 60.0% | |
| GGCTCATGGTGAGACACTCC+TGG | - | chr4_4:14362087-14362106 | None:intergenic | 60.0% | |
| ! | GGAGTGTCTCACCATGAGCC+AGG | + | chr4_4:14362087-14362106 | Msa0671270:CDS | 60.0% |
| GTGTCTCACCATGAGCCAGG+AGG | + | chr4_4:14362090-14362109 | Msa0671270:CDS | 60.0% | |
| TCGACAACGAGGGACTGGGG+GGG | - | chr4_4:14356183-14356202 | None:intergenic | 65.0% | |
| CTCGACAACGAGGGACTGGG+GGG | - | chr4_4:14356184-14356203 | None:intergenic | 65.0% | |
| ACAACGAGGGACTGGGGGGG+AGG | - | chr4_4:14356180-14356199 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 14355841 | 14362396 | 14355841 | ID=Msa0671270;Name=Msa0671270 |
| chr4_4 | mRNA | 14355841 | 14362396 | 14355841 | ID=Msa0671270-mRNA-1;Parent=Msa0671270;Name=Msa0671270-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.6|0.33|1|1|1|6|121|338 |
| chr4_4 | exon | 14355841 | 14355981 | 14355841 | ID=Msa0671270-mRNA-1:exon:4426;Parent=Msa0671270-mRNA-1 |
| chr4_4 | exon | 14356275 | 14356434 | 14356275 | ID=Msa0671270-mRNA-1:exon:4427;Parent=Msa0671270-mRNA-1 |
| chr4_4 | exon | 14359633 | 14359766 | 14359633 | ID=Msa0671270-mRNA-1:exon:4428;Parent=Msa0671270-mRNA-1 |
| chr4_4 | exon | 14360665 | 14360874 | 14360665 | ID=Msa0671270-mRNA-1:exon:4429;Parent=Msa0671270-mRNA-1 |
| chr4_4 | exon | 14361247 | 14361357 | 14361247 | ID=Msa0671270-mRNA-1:exon:4430;Parent=Msa0671270-mRNA-1 |
| chr4_4 | exon | 14362015 | 14362396 | 14362015 | ID=Msa0671270-mRNA-1:exon:4431;Parent=Msa0671270-mRNA-1 |
| chr4_4 | CDS | 14355841 | 14355981 | 14355841 | ID=Msa0671270-mRNA-1:cds;Parent=Msa0671270-mRNA-1 |
| chr4_4 | CDS | 14356275 | 14356434 | 14356275 | ID=Msa0671270-mRNA-1:cds;Parent=Msa0671270-mRNA-1 |
| chr4_4 | CDS | 14359633 | 14359766 | 14359633 | ID=Msa0671270-mRNA-1:cds;Parent=Msa0671270-mRNA-1 |
| chr4_4 | CDS | 14360665 | 14360874 | 14360665 | ID=Msa0671270-mRNA-1:cds;Parent=Msa0671270-mRNA-1 |
| chr4_4 | CDS | 14361247 | 14361357 | 14361247 | ID=Msa0671270-mRNA-1:cds;Parent=Msa0671270-mRNA-1 |
| chr4_4 | CDS | 14362015 | 14362275 | 14362015 | ID=Msa0671270-mRNA-1:cds;Parent=Msa0671270-mRNA-1 |
| chr4_4 | three_prime_UTR | 14362276 | 14362396 | 14362276 | ID=Msa0671270-mRNA-1:three_prime_utr;Parent=Msa0671270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
