AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0679000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0679000 MtrunA17_Chr4g0024861 96.654 538 18 0 1 538 1 538 0.0 1075
Msa0679000 MtrunA17_Chr2g0322441 88.054 519 62 0 18 536 21 539 0.0 942
Msa0679000 MtrunA17_Chr4g0024641 94.196 448 25 1 87 534 11 457 0.0 869
Msa0679000 MtrunA17_Chr4g0024641 78.313 83 18 0 456 538 875 957 1.20e-35 142
Msa0679000 MtrunA17_Chr4g0024641 67.677 99 25 2 438 534 798 891 4.51e-33 134
Msa0679000 MtrunA17_Chr4g0024641 78.481 79 17 0 456 534 503 581 1.02e-32 133
Msa0679000 MtrunA17_Chr4g0024641 78.481 79 17 0 456 534 565 643 1.02e-32 133
Msa0679000 MtrunA17_Chr4g0024641 78.481 79 17 0 456 534 627 705 1.02e-32 133
Msa0679000 MtrunA17_Chr4g0024641 78.481 79 17 0 456 534 689 767 1.02e-32 133
Msa0679000 MtrunA17_Chr4g0024641 93.651 63 4 0 472 534 457 519 3.17e-32 132
Msa0679000 MtrunA17_Chr4g0024641 77.215 79 18 0 456 534 751 829 1.28e-31 130
Msa0679000 MtrunA17_Chr4g0038671 71.375 531 144 2 7 537 17 539 0.0 804
Msa0679000 MtrunA17_Chr1g0157341 72.505 531 146 0 7 537 9 539 0.0 801
Msa0679000 MtrunA17_Chr3g0143671 69.754 529 160 0 9 537 12 540 0.0 796
Msa0679000 MtrunA17_Chr4g0075071 71.136 537 152 1 3 536 4 540 0.0 776
Msa0679000 MtrunA17_Chr8g0374271 60.542 517 201 2 22 537 26 540 0.0 660
Msa0679000 MtrunA17_Chr5g0402831 61.346 520 197 2 18 537 22 537 0.0 653
Msa0679000 MtrunA17_Chr8g0374261 55.916 524 228 3 11 533 13 534 0.0 620
Msa0679000 MtrunA17_Chr4g0043251 52.354 531 244 4 9 531 9 538 0.0 561
Msa0679000 MtrunA17_Chr4g0043261 50.854 527 254 4 9 531 7 532 0.0 547
Msa0679000 MtrunA17_Chr3g0121151 50.847 531 252 4 9 531 48 577 0.0 544
Msa0679000 MtrunA17_Chr3g0121161 50.847 531 252 4 9 531 48 577 0.0 543
Msa0679000 MtrunA17_Chr4g0056511 51.565 543 242 6 10 532 10 551 0.0 535
Msa0679000 MtrunA17_Chr3g0079321 48.556 554 260 9 1 531 1 552 2.15e-178 515
Msa0679000 MtrunA17_Chr3g0121171 51.036 531 251 4 9 531 583 1112 1.89e-175 546
Msa0679000 MtrunA17_Chr3g0121171 50.847 531 252 4 9 531 1158 1687 1.99e-174 543
Msa0679000 MtrunA17_Chr3g0121171 52.317 518 238 4 22 531 21 537 2.89e-174 543
Msa0679000 MtrunA17_Chr3g0121171 49.153 531 252 5 9 531 1733 2253 7.77e-164 514
Msa0679000 MtrunA17_Chr7g0234061 49.240 526 247 7 24 531 26 549 8.93e-169 491
Msa0679000 MtrunA17_Chr1g0197301 45.152 330 178 3 205 531 1 330 5.80e-92 284
Msa0679000 MtrunA17_Chr4g0075781 56.731 208 47 2 131 336 1 167 4.67e-67 214
Msa0679000 MtrunA17_Chr5g0404361 30.282 568 348 19 1 530 54 611 7.75e-57 200
Msa0679000 MtrunA17_Chr3g0118321 27.875 574 342 17 9 531 11 563 3.49e-54 192
Msa0679000 MtrunA17_Chr5g0404341 30.410 536 313 21 1 490 5 526 7.80e-54 191
Msa0679000 MtrunA17_Chr4g0024651 96.386 83 3 0 1 83 1 83 2.15e-51 171
Msa0679000 MtrunA17_Chr8g0382691 28.447 573 322 15 22 535 29 572 4.45e-51 184
Msa0679000 MtrunA17_Chr5g0436461 28.352 522 320 14 11 490 5 514 3.45e-50 181
Msa0679000 MtrunA17_Chr1g0197311 41.004 239 99 6 10 209 8 243 4.03e-49 170
Msa0679000 MtrunA17_Chr3g0104061 27.002 537 353 13 27 530 26 556 4.92e-48 175
Msa0679000 MtrunA17_Chr4g0005921 27.606 518 328 15 13 490 7 517 1.17e-47 174
Msa0679000 MtrunA17_Chr5g0429511 26.325 566 373 15 1 530 1 558 6.75e-47 172
Msa0679000 MtrunA17_Chr3g0118331 28.674 558 325 18 27 531 25 562 1.06e-46 171
Msa0679000 MtrunA17_Chr5g0431581 27.768 569 352 18 7 530 6 560 3.66e-45 167
Msa0679000 MtrunA17_Chr3g0114211 28.489 523 326 16 8 490 16 530 1.17e-43 163
Msa0679000 MtrunA17_Chr8g0346581 26.214 515 339 13 13 490 21 531 7.59e-41 155
Msa0679000 MtrunA17_Chr5g0437681 26.792 530 334 16 8 490 5 527 3.92e-39 150
Msa0679000 MtrunA17_Chr7g0237441 26.511 513 323 18 27 490 33 540 6.18e-38 147
Msa0679000 MtrunA17_Chr7g0238941 24.825 572 375 16 4 530 17 578 1.82e-37 145
Msa0679000 MtrunA17_Chr7g0240991 25.752 532 331 19 10 490 13 531 4.20e-37 144
Msa0679000 MtrunA17_Chr7g0238351 26.654 514 322 17 27 490 33 541 7.71e-37 144
Msa0679000 MtrunA17_Chr7g0237491 25.977 512 327 17 27 490 33 540 1.57e-36 143
Msa0679000 MtrunA17_Chr2g0278811 24.109 589 373 15 11 530 24 607 2.39e-35 140
Msa0679000 MtrunA17_Chr7g0240971 26.214 515 326 15 29 495 27 535 2.25e-34 136
Msa0679000 MtrunA17_Chr4g0031901 24.324 518 346 13 15 490 32 545 1.54e-33 134
Msa0679000 MtrunA17_Chr7g0238981 24.219 512 335 14 27 490 47 553 5.11e-32 130
Msa0679000 MtrunA17_Chr4g0008521 24.819 552 358 17 29 530 28 572 1.10e-29 123
Msa0679000 MtrunA17_Chr3g0118351 25.000 344 200 9 231 531 6 334 1.99e-21 95.9
Msa0679000 MtrunA17_Chr3g0133871 29.126 206 140 4 1 201 3 207 1.74e-20 90.5
Msa0679000 MtrunA17_Chr3g0118341 36.913 149 89 5 27 172 26 172 1.75e-19 87.0
Msa0679000 MtrunA17_Chr3g0133861 28.431 306 166 14 226 490 7 300 7.23e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0679000 AT1G76160.1 71.132 530 152 1 7 536 8 536 0.0 802
Msa0679000 AT4G22010.1 70.356 533 156 2 7 537 5 537 0.0 796
Msa0679000 AT1G41830.1 67.547 530 171 1 8 537 10 538 0.0 766
Msa0679000 AT1G21850.1 67.420 531 171 2 7 537 9 537 0.0 765
Msa0679000 AT1G21860.1 66.038 530 178 2 8 537 10 537 0.0 750
Msa0679000 AT4G38420.1 63.619 536 189 3 8 537 11 546 0.0 715
Msa0679000 AT4G28090.1 59.848 528 208 4 9 533 11 537 0.0 669
Msa0679000 AT5G66920.1 57.500 520 219 1 18 537 28 545 0.0 636
Msa0679000 AT4G38420.3 62.633 471 170 3 8 472 11 481 0.0 612
Msa0679000 AT4G37160.1 53.903 538 239 3 4 533 1 537 0.0 586
Msa0679000 AT1G55570.1 54.444 540 231 5 10 535 7 545 0.0 582
Msa0679000 AT3G13400.2 53.989 539 239 4 5 535 5 542 0.0 580
Msa0679000 AT3G13400.1 53.989 539 239 4 5 535 5 542 0.0 580
Msa0679000 AT2G23630.2 56.480 517 224 1 17 533 25 540 0.0 577
Msa0679000 AT2G23630.1 56.480 517 224 1 17 533 20 535 0.0 576
Msa0679000 AT4G38420.2 62.387 444 161 3 8 445 11 454 0.0 576
Msa0679000 AT1G55560.1 52.876 539 245 4 5 535 4 541 0.0 575
Msa0679000 AT3G13390.1 55.364 522 223 4 23 535 24 544 0.0 570
Msa0679000 AT4G12420.1 51.087 552 245 8 1 531 1 548 0.0 550
Msa0679000 AT4G12420.2 51.087 552 245 8 1 531 1 548 0.0 550
Msa0679000 AT5G48450.1 50.375 534 250 9 12 532 13 544 0.0 524
Msa0679000 AT5G48450.2 50.375 534 250 9 12 532 13 544 0.0 523
Msa0679000 AT5G51480.1 49.432 528 246 8 24 531 25 551 3.85e-178 514
Msa0679000 AT1G75790.1 48.059 541 269 4 4 533 5 544 5.36e-177 510
Msa0679000 AT4G25240.2 49.358 545 254 8 7 531 9 551 3.47e-176 509
Msa0679000 AT4G25240.1 49.358 545 254 8 7 531 9 551 3.47e-176 509
Msa0679000 AT4G37160.2 55.111 450 193 3 4 445 1 449 3.00e-173 497
Msa0679000 AT4G39830.1 27.163 578 353 15 9 533 18 580 3.28e-54 192
Msa0679000 AT5G21105.1 28.205 585 328 21 9 531 22 576 4.40e-54 192
Msa0679000 AT5G21105.3 28.967 542 298 20 9 488 22 538 3.06e-52 186
Msa0679000 AT5G21100.1 27.857 560 319 19 31 531 28 561 5.08e-52 186
Msa0679000 AT5G58910.2 28.463 527 331 14 4 490 7 527 4.92e-51 184
Msa0679000 AT2G38080.1 27.257 565 369 14 1 530 1 558 8.02e-50 180
Msa0679000 AT5G58910.3 28.463 527 330 15 4 490 7 526 2.04e-49 179
Msa0679000 AT5G01190.1 26.056 568 356 19 9 530 9 558 7.02e-45 167
Msa0679000 AT2G46570.1 26.036 507 323 13 27 490 32 529 7.97e-45 167
Msa0679000 AT2G30210.1 28.008 532 330 18 4 490 7 530 1.45e-44 166
Msa0679000 AT5G58910.1 28.778 483 291 15 48 490 14 483 1.99e-43 162
Msa0679000 AT5G03260.1 28.400 500 310 16 29 490 28 517 3.53e-42 159
Msa0679000 AT5G01190.2 25.704 568 344 20 9 530 9 544 1.54e-41 157
Msa0679000 AT4G39830.2 27.181 493 292 14 93 533 8 485 1.30e-40 153
Msa0679000 AT4G39830.3 27.181 493 292 14 93 533 6 483 1.35e-40 153
Msa0679000 AT5G01050.1 27.422 547 330 19 38 532 39 570 1.49e-39 152
Msa0679000 AT1G18140.1 26.465 529 308 18 27 490 29 541 7.90e-38 147
Msa0679000 AT5G07130.1 26.792 530 330 19 10 490 9 529 1.31e-37 146
Msa0679000 AT5G09360.1 24.517 518 351 13 8 490 17 529 9.36e-37 144
Msa0679000 AT2G29130.1 25.709 529 340 17 11 490 9 533 1.24e-36 144
Msa0679000 AT5G01040.1 27.655 499 304 16 38 490 39 526 1.97e-36 143
Msa0679000 AT5G05390.1 25.287 522 347 12 8 490 8 525 2.31e-36 142
Msa0679000 AT4G39830.4 26.369 493 283 14 93 533 8 472 4.13e-36 140
Msa0679000 AT2G40370.1 25.560 536 336 15 9 490 14 540 9.66e-36 141
Msa0679000 AT5G48100.1 27.198 489 302 15 48 490 43 523 1.99e-35 140
Msa0679000 AT2G46570.2 25.556 450 283 13 84 490 4 444 9.44e-35 137
Msa0679000 AT3G09220.1 25.047 527 343 14 7 490 10 527 3.87e-34 136
Msa0679000 AT5G21105.2 28.571 357 201 12 205 531 53 385 3.88e-31 125
Msa0679000 AT5G60020.1 22.664 578 385 17 10 530 5 577 7.99e-30 124
Msa0679000 AT5G60020.2 23.260 546 357 17 10 498 5 545 7.98e-29 120
Msa0679000 AT5G60020.3 22.905 537 355 16 48 530 14 545 1.00e-28 120
Msa0679000 AT5G07130.2 26.222 450 276 18 90 490 2 444 8.58e-24 105
Msa0679000 AT5G07130.3 26.222 450 276 18 90 490 2 444 8.58e-24 105
Msa0679000 AT3G09220.2 24.651 430 283 11 100 490 3 430 9.31e-22 98.6

Find 187 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGATTGTATCTTTCTTTC+AGG 0.078229 4_4:-36368180 None:intergenic
ACCCTTGCCTTTCCCATTAT+TGG 0.099272 4_4:+36367802 Msa0679000:three_prime_UTR
AACTCAGCAGGAAGTGTTTC+TGG 0.230049 4_4:+36365877 Msa0679000:CDS
GAACAGTTCTGAACCAATAA+TGG 0.275779 4_4:-36367815 None:intergenic
ATGAACCTTTCCTCATTTCT+TGG 0.290193 4_4:+36364026 Msa0679000:CDS
AAAACACCCTATTCAAATTA+TGG 0.290391 4_4:-36368069 None:intergenic
TTCATCGGGTAGAACAAATT+AGG 0.297512 4_4:-36368100 None:intergenic
TGGTAGGTTCCTTGTGGATT+TGG 0.297781 4_4:-36366669 None:intergenic
AGTGTTTCTGGTCCTCTTCC+TGG 0.307053 4_4:+36365889 Msa0679000:CDS
CCGCCACCGGTGGGGTTGTC+CGG 0.309224 4_4:-36366861 None:intergenic
CACAAGGCAGCAGGAGGTTA+TGG 0.309433 4_4:+36364924 Msa0679000:CDS
GACTCACTTGACATTCATTT+GGG 0.313425 4_4:+36365739 Msa0679000:CDS
GGGGCGGAGCCTTTGTATAC+TGG 0.315372 4_4:-36368199 None:intergenic
GAATACTCCATAATTTGAAT+AGG 0.315580 4_4:+36368062 Msa0679000:three_prime_UTR
CCACAAGGAACCTACCATTA+TGG 0.317959 4_4:+36366675 Msa0679000:CDS
TGACTCACTTGACATTCATT+TGG 0.322743 4_4:+36365738 Msa0679000:CDS
CAGGGAAGACTTACAGATTC+CGG 0.326068 4_4:+36365614 Msa0679000:intron
GTACCAATCTCCTGCCAATA+TGG 0.328899 4_4:-36365012 None:intergenic
GCTTAGTGTGGGTTGTGATT+AGG 0.329156 4_4:+36367909 Msa0679000:three_prime_UTR
ATGGTAAATTTGTTTGGTTT+TGG 0.332967 4_4:+36363518 Msa0679000:five_prime_UTR
AATACACTCTAAGATAAAAT+TGG 0.334224 4_4:-36367670 None:intergenic
CAAATGGAGAAGATCCTTAT+AGG 0.337572 4_4:+36363645 Msa0679000:CDS
ATCCGGAGATTTCACCATAT+TGG 0.345336 4_4:+36364998 Msa0679000:CDS
ATCTAGGTAATGACATCATT+AGG 0.345644 4_4:+36367935 Msa0679000:three_prime_UTR
TTGATAAATGGACAATTTCC+AGG 0.349584 4_4:+36363944 Msa0679000:CDS
GTTCCTTGTGGATTTGGTCT+TGG 0.355975 4_4:-36366663 None:intergenic
TTCCAATTATAAAACCTATA+AGG 0.362434 4_4:-36363659 None:intergenic
CTCCACAAAACCTCGAAAAT+CGG 0.365811 4_4:-36366913 None:intergenic
TTGCAATCATGGCACATTGA+TGG 0.375745 4_4:+36366963 Msa0679000:CDS
CATGATTGCAAAGTGTCTTC+AGG 0.375827 4_4:-36366951 None:intergenic
TATAATTGGAATGTTACATA+TGG 0.378868 4_4:+36363671 Msa0679000:CDS
TTGAACAAGCTCGGTCTCTA+AGG 0.387217 4_4:+36365941 Msa0679000:CDS
CCCTTGAATTCTGAAATTGA+TGG 0.387804 4_4:-36365662 None:intergenic
TGAAGTGCATTGCTTGGAAT+AGG 0.394371 4_4:-36367722 None:intergenic
CTGAAGACACTTTGCAATCA+TGG 0.394639 4_4:+36366952 Msa0679000:CDS
TCATCTCTCACTGAATTTGC+AGG 0.400229 4_4:-36367695 None:intergenic
GGACATAGCTTCTTTGTAGT+AGG 0.408807 4_4:+36366984 Msa0679000:CDS
GAATTGGGCAAGACAGTACT+TGG 0.414940 4_4:+36367643 Msa0679000:CDS
TCCATCAATTTCAGAATTCA+AGG 0.421831 4_4:+36365661 Msa0679000:CDS
AATACTCCATAATTTGAATA+GGG 0.426695 4_4:+36368063 Msa0679000:three_prime_UTR
AACAGTTCTGAACCAATAAT+GGG 0.427630 4_4:-36367814 None:intergenic
TCACCATATTGGCAGGAGAT+TGG 0.428797 4_4:+36365009 Msa0679000:CDS
TCATCGGGTAGAACAAATTA+GGG 0.430960 4_4:-36368099 None:intergenic
CGCCACCGGTGGGGTTGTCC+GGG 0.436488 4_4:-36366860 None:intergenic
TTACTGCACAGCTAGCAAAA+AGG 0.441627 4_4:-36367989 None:intergenic
GGGGCAGACGTATTCTGTAT+TGG 0.447694 4_4:+36365759 Msa0679000:CDS
GGAATGTGAGGTCTGAGAAT+TGG 0.449805 4_4:+36367627 Msa0679000:CDS
TCTAGGTAATGACATCATTA+GGG 0.450618 4_4:+36367936 Msa0679000:three_prime_UTR
GAAGTGCATTGCTTGGAATA+GGG 0.450911 4_4:-36367721 None:intergenic
AAGTTCTGTCCTGGAGAGAT+TGG 0.452707 4_4:-36364837 None:intergenic
TTGTGTTTATCATTCCATAA+TGG 0.454708 4_4:-36366689 None:intergenic
GAATGTGAGGTCTGAGAATT+GGG 0.454791 4_4:+36367628 Msa0679000:CDS
CCATTGATGACAAGTCCATC+AGG 0.456809 4_4:-36365173 None:intergenic
TTCCTTGTTGCATGTGCAAA+TGG 0.460618 4_4:+36363629 Msa0679000:CDS
AGTGATCTTCCTTTCCCTGA+TGG 0.460805 4_4:+36365158 Msa0679000:CDS
TACAGTGAAGTCCATGACTT+TGG 0.462737 4_4:-36367578 None:intergenic
GGTTGTGATTAGGTTCATCT+AGG 0.462811 4_4:+36367919 Msa0679000:three_prime_UTR
AAGTGCATGGTAAATTTGTT+TGG 0.467441 4_4:+36363512 Msa0679000:five_prime_UTR
ACTGACTCAATCTGTGGCCC+TGG 0.467858 4_4:-36363962 None:intergenic
CCTGATGGACTTGTCATCAA+TGG 0.468702 4_4:+36365173 Msa0679000:CDS
CCACACTGAAGTGCATTGCT+TGG 0.471125 4_4:-36367728 None:intergenic
TCCACTTGGAGTTAAACAAC+AGG 0.471870 4_4:+36363703 Msa0679000:CDS
TCATGGCAGGATGGAGTGTA+TGG 0.474062 4_4:+36364804 Msa0679000:CDS
TACACATTCACTGTTGATCA+AGG 0.474298 4_4:+36365212 Msa0679000:CDS
ACAATGTTCTGTCTTGTTGT+TGG 0.474836 4_4:+36363601 Msa0679000:CDS
AATTCTGCTCCAATTATCAA+TGG 0.480816 4_4:+36366732 Msa0679000:CDS
CCGGACAACCCCACCGGTGG+CGG 0.481645 4_4:+36366861 Msa0679000:CDS
AGGGGATGGCCCGCTTAGTG+TGG 0.485114 4_4:+36367897 Msa0679000:three_prime_UTR
TGATGGTTGTGACAGGGTTA+CGG 0.486343 4_4:+36368019 Msa0679000:three_prime_UTR
GACAACCCCACCGGTGGCGG+TGG 0.486775 4_4:+36366864 Msa0679000:CDS
TAATCCCCACATTTGATATC+CGG 0.487792 4_4:-36365633 None:intergenic
CTTCATTATAGTAACTCAGC+AGG 0.490573 4_4:+36365865 Msa0679000:CDS
ATCACTTCCGCTATCTAAAA+CGG 0.493695 4_4:-36365141 None:intergenic
ATTTCAGTGGTTGGTCCACC+AGG 0.494287 4_4:-36365907 None:intergenic
ATGAAGCTTGTTGAGGTGGA+AGG 0.497246 4_4:+36365691 Msa0679000:CDS
AGTTTGAGTGGTGTATCAGC+AGG 0.498988 4_4:-36366792 None:intergenic
TGTTCAAATTCTAAAGCAAA+AGG 0.499877 4_4:+36363420 Msa0679000:five_prime_UTR
CACAACAAGGTTCACCTCAC+AGG 0.501307 4_4:+36365822 Msa0679000:CDS
TGTGCAGTAATGTGAATTGA+TGG 0.504128 4_4:+36368002 Msa0679000:three_prime_UTR
TCTCCGGATGGAGGATCAAA+AGG 0.505297 4_4:-36364984 None:intergenic
GTTCTACCCGATGAATGACC+TGG 0.508631 4_4:+36368108 Msa0679000:three_prime_UTR
AATTGCTCGTAGTACAGTTC+AGG 0.508901 4_4:+36367274 Msa0679000:CDS
GACTTCACTGTACATGCCAT+TGG 0.510353 4_4:+36367589 Msa0679000:CDS
AACAGTGAATGTGTAAGCAT+TGG 0.510570 4_4:-36365204 None:intergenic
ACAACAATGTAGTAGTCATT+TGG 0.512474 4_4:-36365799 None:intergenic
AGTTGTCATTTGAGTTGAAG+AGG 0.513050 4_4:+36363547 Msa0679000:five_prime_UTR
TGTGAATTGATGGTTGTGAC+AGG 0.513179 4_4:+36368012 Msa0679000:three_prime_UTR
GGAGATTTCACCATATTGGC+AGG 0.513998 4_4:+36365002 Msa0679000:CDS
GACATAGCTTCTTTGTAGTA+GGG 0.514001 4_4:+36366985 Msa0679000:CDS
ATTGGAATTTGCAGGATGGA+TGG 0.516169 4_4:+36367203 Msa0679000:intron
ACCTGTTGTTTAACTCCAAG+TGG 0.517766 4_4:-36363704 None:intergenic
CTTCAAGTAAAAGATCAGAT+TGG 0.518189 4_4:+36364870 Msa0679000:CDS
GGAAACCCAGGTCATTCATC+GGG 0.521221 4_4:-36368114 None:intergenic
TGCCAATATGGTGAAATCTC+CGG 0.525221 4_4:-36365000 None:intergenic
ATATAAGTGAAGTTCTGTCC+TGG 0.525875 4_4:-36364846 None:intergenic
GGTTTCCTGCTATGAGGTGA+TGG 0.528165 4_4:+36368130 Msa0679000:three_prime_UTR
ACTTCAGTGTGGCAAGGCAG+TGG 0.529238 4_4:+36367739 Msa0679000:CDS
ACAAATTGTCCAATCTCTCC+AGG 0.532559 4_4:+36364828 Msa0679000:CDS
AAGTACCATCACCTCATAGC+AGG 0.536001 4_4:-36368135 None:intergenic
GTTTATCATTCCATAATGGT+AGG 0.542317 4_4:-36366685 None:intergenic
AAAAGGTAAAAGAAAAGTGT+AGG 0.542903 4_4:+36363437 Msa0679000:five_prime_UTR
AATTCTGAAATTGATGGATG+TGG 0.544467 4_4:-36365656 None:intergenic
GATGGAGGATCAAAAGGTAC+AGG 0.546916 4_4:-36364978 None:intergenic
CTGATTACTTCAAGATCGAA+GGG 0.547045 4_4:+36366817 Msa0679000:CDS
GACCTGGGTTTCCTGCTATG+AGG 0.547803 4_4:+36368124 Msa0679000:three_prime_UTR
TATGGAGATATTTATCCACT+TGG 0.549980 4_4:+36363689 Msa0679000:CDS
AATATTGAATTGAAAGTGCA+TGG 0.550776 4_4:+36363499 Msa0679000:five_prime_UTR
CAGATTCCGGATATCAAATG+TGG 0.551399 4_4:+36365627 Msa0679000:CDS
CTTCAGTGTGGCAAGGCAGT+GGG 0.552136 4_4:+36367740 Msa0679000:CDS
CCATAATGGTAGGTTCCTTG+TGG 0.554362 4_4:-36366675 None:intergenic
GGTAGAACAAATTAGGGTGT+AGG 0.554792 4_4:-36368093 None:intergenic
GTGGTTGGTCCACCAGGAAG+AGG 0.554841 4_4:-36365901 None:intergenic
AAGATAACCACCGCCACCGG+TGG 0.558909 4_4:-36366871 None:intergenic
GACCAACCACTGAAATCGAT+TGG 0.560334 4_4:+36365914 Msa0679000:CDS
AGGAAACCCAGGTCATTCAT+CGG 0.560592 4_4:-36368115 None:intergenic
AGGAGGAATCTTACAGCAAG+TGG 0.561277 4_4:+36366639 Msa0679000:intron
TGCTGCCTTGTGAAAAGCAA+GGG 0.562564 4_4:-36364913 None:intergenic
ACACTCTAAGATAAAATTGG+TGG 0.562579 4_4:-36367667 None:intergenic
CTGAAGATAACCACCGCCAC+CGG 0.563841 4_4:-36366874 None:intergenic
ACCAATAATGGGAAAGGCAA+GGG 0.566399 4_4:-36367803 None:intergenic
CACATTCCCACATTATCCAA+TGG 0.568508 4_4:-36367605 None:intergenic
AATCACAACCCACACTAAGC+GGG 0.569558 4_4:-36367906 None:intergenic
AGTATCCCGGACAACCCCAC+CGG 0.569660 4_4:+36366855 Msa0679000:CDS
TGATAAATGGACAATTTCCA+GGG 0.570857 4_4:+36363945 Msa0679000:CDS
TTCTACCCGATGAATGACCT+GGG 0.571773 4_4:+36368109 Msa0679000:three_prime_UTR
TAAGATGAAGCTTGTTGAGG+TGG 0.574215 4_4:+36365687 Msa0679000:CDS
CACAGGTGTATCCAAAGTCA+TGG 0.575020 4_4:+36367567 Msa0679000:intron
TTATCTTCAGACTTCTGTCA+TGG 0.575658 4_4:+36366887 Msa0679000:CDS
ACAATGTAGTAGTCATTTGG+TGG 0.577035 4_4:-36365796 None:intergenic
GCTGATTACTTCAAGATCGA+AGG 0.577722 4_4:+36366816 Msa0679000:CDS
TTCTGAACCAATAATGGGAA+AGG 0.580089 4_4:-36367809 None:intergenic
GCAGAGGAGAAACTCATGGC+AGG 0.580251 4_4:+36364791 Msa0679000:CDS
CTCCATTTGCACATGCAACA+AGG 0.580472 4_4:-36363631 None:intergenic
TGAGTTACTATAATGAAGAA+TGG 0.581564 4_4:-36365860 None:intergenic
ATCAAAAGGTACAGGAATCA+CGG 0.589866 4_4:-36364970 None:intergenic
AACCAATAATGGGAAAGGCA+AGG 0.589996 4_4:-36367804 None:intergenic
GTTTCTGGTCCTCTTCCTGG+TGG 0.590601 4_4:+36365892 Msa0679000:CDS
AAGTAATCAGCTAGTTTGAG+TGG 0.592921 4_4:-36366804 None:intergenic
TGCCTTGTGAAAAGCAAGGG+AGG 0.596663 4_4:-36364910 None:intergenic
GACCAATCGATTTCAGTGGT+TGG 0.598810 4_4:-36365916 None:intergenic
AGATAACCACCGCCACCGGT+GGG 0.599729 4_4:-36366870 None:intergenic
ATGTGGGAATGTGGAATGTG+AGG 0.600216 4_4:+36367615 Msa0679000:CDS
ATAGGAATGGAGTGCTGCAG+AGG 0.601936 4_4:+36364775 Msa0679000:intron
CCATCAATTTCAGAATTCAA+GGG 0.602834 4_4:+36365662 Msa0679000:CDS
AGGAGAAACTCATGGCAGGA+TGG 0.603685 4_4:+36364795 Msa0679000:CDS
ACAAGACTAACCAAGAAATG+AGG 0.605612 4_4:-36364036 None:intergenic
AGATTCCGGATATCAAATGT+GGG 0.607158 4_4:+36365628 Msa0679000:CDS
ATGACAAGTCCATCAGGGAA+AGG 0.607922 4_4:-36365167 None:intergenic
ACTACATTGTTGTCACAACA+AGG 0.609823 4_4:+36365809 Msa0679000:CDS
GGAATTTGCAGGATGGATGG+AGG 0.610007 4_4:+36367206 Msa0679000:intron
CACCTCATAGCAGGAAACCC+AGG 0.611486 4_4:-36368126 None:intergenic
ATTGGTCCGTTGAACAAGCT+CGG 0.612260 4_4:+36365932 Msa0679000:CDS
ATCCCGGACAACCCCACCGG+TGG 0.615788 4_4:+36366858 Msa0679000:CDS
AACGGACCAATCGATTTCAG+TGG 0.617391 4_4:-36365920 None:intergenic
CAATGCACTTCAGTGTGGCA+AGG 0.617833 4_4:+36367733 Msa0679000:CDS
TGCTGCAGAGGAGAAACTCA+TGG 0.618620 4_4:+36364787 Msa0679000:CDS
GTACATGCCATTGGATAATG+TGG 0.618969 4_4:+36367598 Msa0679000:CDS
GGACTTGTCATCAATGGCCG+CGG 0.620003 4_4:+36365179 Msa0679000:CDS
GATAACCACCGCCACCGGTG+GGG 0.622912 4_4:-36366869 None:intergenic
GGGGATGGCCCGCTTAGTGT+GGG 0.625387 4_4:+36367898 Msa0679000:three_prime_UTR
CATTGATGACAAGTCCATCA+GGG 0.632768 4_4:-36365172 None:intergenic
GCCTTGTGAAAAGCAAGGGA+GGG 0.634524 4_4:-36364909 None:intergenic
CTGCTGCCTTGTGAAAAGCA+AGG 0.636821 4_4:-36364914 None:intergenic
TAGAGACCGAGCTTGTTCAA+CGG 0.637365 4_4:-36365938 None:intergenic
ACTAACCAAGAAATGAGGAA+AGG 0.643027 4_4:-36364031 None:intergenic
GCATAAGATGAAGCTTGTTG+AGG 0.650000 4_4:+36365684 Msa0679000:CDS
TTAGTCACTGACTCAATCTG+TGG 0.650612 4_4:-36363968 None:intergenic
TAATCACAACCCACACTAAG+CGG 0.650734 4_4:-36367907 None:intergenic
ATGGTGAAATCTCCGGATGG+AGG 0.653324 4_4:-36364993 None:intergenic
GCAGGATGGATGGAGGACAA+TGG 0.655581 4_4:+36367213 Msa0679000:intron
ATGTGTAAGCATTGGAACCG+CGG 0.655680 4_4:-36365196 None:intergenic
AAGGCAGCAGGAGGTTATGG+CGG 0.659210 4_4:+36364927 Msa0679000:CDS
AGATACAATCCAGTATACAA+AGG 0.660138 4_4:+36368190 Msa0679000:three_prime_UTR
GTATTCTGTATTGGTTACTG+CGG 0.660650 4_4:+36365768 Msa0679000:CDS
GTGAATTGATGGTTGTGACA+GGG 0.663785 4_4:+36368013 Msa0679000:three_prime_UTR
GTTTGAGTGGTGTATCAGCA+GGG 0.670319 4_4:-36366791 None:intergenic
CATTGGATAATGTGGGAATG+TGG 0.674160 4_4:+36367606 Msa0679000:CDS
AATTGGGCAAGACAGTACTT+GGG 0.674927 4_4:+36367644 Msa0679000:CDS
TCTTCAGACTTCTGTCATGG+CGG 0.691399 4_4:+36366890 Msa0679000:CDS
CCAAGCAATGCACTTCAGTG+TGG 0.697000 4_4:+36367728 Msa0679000:CDS
AATATGGTGAAATCTCCGGA+TGG 0.697908 4_4:-36364996 None:intergenic
GATTCCGGATATCAAATGTG+GGG 0.700602 4_4:+36365629 Msa0679000:CDS
ACTCACTTGACATTCATTTG+GGG 0.703591 4_4:+36365740 Msa0679000:CDS
GGACCAAGACCAAATCCACA+AGG 0.716812 4_4:+36366660 Msa0679000:CDS
TACATGCCATTGGATAATGT+GGG 0.717897 4_4:+36367599 Msa0679000:CDS
TGATTACTTCAAGATCGAAG+GGG 0.721706 4_4:+36366818 Msa0679000:CDS
TGAAGCATTCAGCGCCTGTG+AGG 0.762437 4_4:-36365836 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATACAAAAAAAAAAAAGTT+TGG - chr4_4:36366556-36366575 None:intergenic 10.0%
!! TTAAATAAAAATACTAATTG+TGG - chr4_4:36367769-36367788 None:intergenic 10.0%
!!! GTGTTAAAAATAATTTTTAT+AGG + chr4_4:36367877-36367896 Msa0679000:three_prime_UTR 10.0%
!!! GTTAAAAATAATTTTTATAG+GGG + chr4_4:36367879-36367898 Msa0679000:three_prime_UTR 10.0%
!! TCTTTCTTATAAATGAAATT+TGG + chr4_4:36363837-36363856 Msa0679000:intron 15.0%
!! TTCATATATTCATTTCTATA+TGG + chr4_4:36363899-36363918 Msa0679000:intron 15.0%
!!! TTGTTATTTACTTATTTGTT+TGG - chr4_4:36364676-36364695 None:intergenic 15.0%
!! AATAAGTAAATAACAATATC+AGG + chr4_4:36364680-36364699 Msa0679000:intron 15.0%
!! TTTAGATTATGTAATTCTAT+AGG + chr4_4:36364757-36364776 Msa0679000:intron 15.0%
!! AAAATAAATCTATTAGAATG+AGG + chr4_4:36365534-36365553 Msa0679000:intron 15.0%
!! AAATAAATCTATTAGAATGA+GGG + chr4_4:36365535-36365554 Msa0679000:intron 15.0%
!!! TGATAATATGGATATTTTAT+TGG + chr4_4:36367185-36367204 Msa0679000:intron 15.0%
!!! ATTAGTATTTTTATTTAACC+AGG + chr4_4:36367771-36367790 Msa0679000:exon 15.0%
!!! ATCCTTATAGGTTTTATAAT+TGG + chr4_4:36363657-36363676 Msa0679000:CDS 20.0%
!! TTCCAATTATAAAACCTATA+AGG - chr4_4:36363662-36363681 None:intergenic 20.0%
!! TATAATTGGAATGTTACATA+TGG + chr4_4:36363671-36363690 Msa0679000:CDS 20.0%
!! ATGTTTCTTCAAATTATTAG+CGG + chr4_4:36363860-36363879 Msa0679000:intron 20.0%
!!! TATCAATGTTTTTAATAGCT+TGG + chr4_4:36364003-36364022 Msa0679000:CDS 20.0%
!! CAATAAATTGTGCTAAAAAA+AGG - chr4_4:36364131-36364150 None:intergenic 20.0%
!!! CTTTTTTTAGCACAATTTAT+TGG + chr4_4:36364129-36364148 Msa0679000:intron 20.0%
!! TCGAAATTCAAAGATTAAAT+TGG - chr4_4:36364232-36364251 None:intergenic 20.0%
!! ACAACACTAATATTTATTTC+TGG + chr4_4:36364351-36364370 Msa0679000:intron 20.0%
!!! AGACCAAATTAATTTGTTTA+TGG - chr4_4:36364411-36364430 None:intergenic 20.0%
!!! AATTTAGTCTTTAAAATCAG+AGG - chr4_4:36364604-36364623 None:intergenic 20.0%
!!! TCTGATTTTAAAGACTAAAT+TGG + chr4_4:36364603-36364622 Msa0679000:intron 20.0%
!! ATTATGTAATTCTATAGGAA+TGG + chr4_4:36364762-36364781 Msa0679000:intron 20.0%
!!! TTAATTTGTGTTTATTTTGC+AGG + chr4_4:36365109-36365128 Msa0679000:intron 20.0%
!! ATATAAATTACTGCACATAT+CGG + chr4_4:36366453-36366472 Msa0679000:intron 20.0%
!! AACAAATGATTAATTGAATC+AGG + chr4_4:36366619-36366638 Msa0679000:intron 20.0%
!!! TATTTTCCATTCTGATAATA+TGG + chr4_4:36367173-36367192 Msa0679000:intron 20.0%
!! AAATATCCATATTATCAGAA+TGG - chr4_4:36367182-36367201 None:intergenic 20.0%
!! AAAATATGAATGAGTATTAG+AGG - chr4_4:36367430-36367449 None:intergenic 20.0%
!!! CATATTACTGATAATCATTT+TGG + chr4_4:36367504-36367523 Msa0679000:intron 20.0%
!!! AATACACTCTAAGATAAAAT+TGG - chr4_4:36367673-36367692 None:intergenic 20.0%
!!! AAAATAATTTTTATAGGGGA+TGG + chr4_4:36367883-36367902 Msa0679000:three_prime_UTR 20.0%
!! AATACTCCATAATTTGAATA+GGG + chr4_4:36368063-36368082 Msa0679000:three_prime_UTR 20.0%
!!! TGTTCAAATTCTAAAGCAAA+AGG + chr4_4:36363420-36363439 Msa0679000:five_prime_UTR 25.0%
!! AAAAGGTAAAAGAAAAGTGT+AGG + chr4_4:36363437-36363456 Msa0679000:five_prime_UTR 25.0%
!! AATATTGAATTGAAAGTGCA+TGG + chr4_4:36363499-36363518 Msa0679000:five_prime_UTR 25.0%
!!! ATGGTAAATTTGTTTGGTTT+TGG + chr4_4:36363518-36363537 Msa0679000:five_prime_UTR 25.0%
! GTGAGAAAAAACTGAAAAAT+GGG + chr4_4:36363569-36363588 Msa0679000:exon 25.0%
!!! TTCCTTTTTTTTTGAAGAAG+AGG + chr4_4:36363735-36363754 Msa0679000:intron 25.0%
! TACCTCTTCTTCAAAAAAAA+AGG - chr4_4:36363740-36363759 None:intergenic 25.0%
! ATTTATTGGAGTGAATTGTA+TGG + chr4_4:36364143-36364162 Msa0679000:intron 25.0%
!!! TAGATAATTTTGAAAACAGC+TGG + chr4_4:36364181-36364200 Msa0679000:intron 25.0%
! TTTGAATTTCGACTTAATCT+CGG + chr4_4:36364240-36364259 Msa0679000:intron 25.0%
!!! TAGTATTTTAGTTTAAGACG+AGG - chr4_4:36364331-36364350 None:intergenic 25.0%
! GGTCCATAAACAAATTAATT+TGG + chr4_4:36364405-36364424 Msa0679000:intron 25.0%
!!! GATTTTAAAGACTAAATTGG+TGG + chr4_4:36364606-36364625 Msa0679000:intron 25.0%
!! AAAACACTGAATTTTCAACA+TGG - chr4_4:36364739-36364758 None:intergenic 25.0%
! CAAGATTTCTTAAACATTGA+AGG - chr4_4:36365076-36365095 None:intergenic 25.0%
!! CAAATTTCAGGTAAACAAAT+TGG - chr4_4:36365254-36365273 None:intergenic 25.0%
! GTAGTCATACAAAACAAAAT+CGG - chr4_4:36365295-36365314 None:intergenic 25.0%
!! TGTTTTGTATGACTACTAAT+CGG + chr4_4:36365299-36365318 Msa0679000:intron 25.0%
!!! TTGTTAGATATGTTTTTCGA+GGG + chr4_4:36365322-36365341 Msa0679000:intron 25.0%
! ATTATTTGTATCGAGAAAAG+CGG - chr4_4:36365451-36365470 None:intergenic 25.0%
! TGAGTTACTATAATGAAGAA+TGG - chr4_4:36365863-36365882 None:intergenic 25.0%
! CGATCAATAAGAATTGAATT+CGG + chr4_4:36366051-36366070 Msa0679000:intron 25.0%
!!! AGTTTGCTTATAATTCGTTT+TGG - chr4_4:36366339-36366358 None:intergenic 25.0%
! GTATAAATTCCTATGAAACA+CGG - chr4_4:36366531-36366550 None:intergenic 25.0%
! AAATGATTAATTGAATCAGG+AGG + chr4_4:36366622-36366641 Msa0679000:intron 25.0%
! TTGTGTTTATCATTCCATAA+TGG - chr4_4:36366692-36366711 None:intergenic 25.0%
!!! CTTTGTTTTCCATTGATAAT+TGG - chr4_4:36366744-36366763 None:intergenic 25.0%
!! GATATTTTATTGGAATTTGC+AGG + chr4_4:36367195-36367214 Msa0679000:intron 25.0%
! AATATTTATAAGGGAACCTT+TGG + chr4_4:36367360-36367379 Msa0679000:intron 25.0%
! CATCATAAATCATATGTCAA+TGG - chr4_4:36367405-36367424 None:intergenic 25.0%
!! TTTGGTCTTTAACATGATTA+AGG + chr4_4:36367522-36367541 Msa0679000:intron 25.0%
!! TTGGTCTTTAACATGATTAA+GGG + chr4_4:36367523-36367542 Msa0679000:intron 25.0%
! GAATACTCCATAATTTGAAT+AGG + chr4_4:36368062-36368081 Msa0679000:three_prime_UTR 25.0%
! AAAACACCCTATTCAAATTA+TGG - chr4_4:36368072-36368091 None:intergenic 25.0%
! AAGTGCATGGTAAATTTGTT+TGG + chr4_4:36363512-36363531 Msa0679000:five_prime_UTR 30.0%
GGTGAGAAAAAACTGAAAAA+TGG + chr4_4:36363568-36363587 Msa0679000:exon 30.0%
TATGGAGATATTTATCCACT+TGG + chr4_4:36363689-36363708 Msa0679000:CDS 30.0%
TTGATAAATGGACAATTTCC+AGG + chr4_4:36363944-36363963 Msa0679000:CDS 30.0%
TGATAAATGGACAATTTCCA+GGG + chr4_4:36363945-36363964 Msa0679000:CDS 30.0%
! TTGTTTCTTGTTTAGTTCAC+TGG + chr4_4:36364055-36364074 Msa0679000:intron 30.0%
!! TATTTATTTCTGGAGAGCAT+TGG + chr4_4:36364361-36364380 Msa0679000:intron 30.0%
TGCCCTTAAGAATATATTGA+CGG + chr4_4:36364384-36364403 Msa0679000:intron 30.0%
GACCGTCAATATATTCTTAA+GGG - chr4_4:36364389-36364408 None:intergenic 30.0%
TTCGTCGAAATTATTTGAGA+GGG - chr4_4:36364484-36364503 None:intergenic 30.0%
ATTCGTCGAAATTATTTGAG+AGG - chr4_4:36364485-36364504 None:intergenic 30.0%
!! TCTTTAAAATCAGAGGTGTT+AGG - chr4_4:36364597-36364616 None:intergenic 30.0%
CTTCAAGTAAAAGATCAGAT+TGG + chr4_4:36364870-36364889 Msa0679000:CDS 30.0%
!!! TGTTTATTTTGCAGGATTTG+AGG + chr4_4:36365117-36365136 Msa0679000:intron 30.0%
!!! GTTTATTTTGCAGGATTTGA+GGG + chr4_4:36365118-36365137 Msa0679000:intron 30.0%
! GTTGTTAGATATGTTTTTCG+AGG + chr4_4:36365321-36365340 Msa0679000:intron 30.0%
CATAACTGTTGAAGAGATAA+GGG - chr4_4:36365363-36365382 None:intergenic 30.0%
ACATAACTGTTGAAGAGATA+AGG - chr4_4:36365364-36365383 None:intergenic 30.0%
AGTAGTTAACTAATATCAGC+TGG - chr4_4:36365395-36365414 None:intergenic 30.0%
TTATTTGTATCGAGAAAAGC+GGG - chr4_4:36365450-36365469 None:intergenic 30.0%
TAAATCTATTAGAATGAGGG+CGG + chr4_4:36365538-36365557 Msa0679000:intron 30.0%
!! AATTCTGAAATTGATGGATG+TGG - chr4_4:36365659-36365678 None:intergenic 30.0%
TCCATCAATTTCAGAATTCA+AGG + chr4_4:36365661-36365680 Msa0679000:CDS 30.0%
CCATCAATTTCAGAATTCAA+GGG + chr4_4:36365662-36365681 Msa0679000:CDS 30.0%
ACAACAATGTAGTAGTCATT+TGG - chr4_4:36365802-36365821 None:intergenic 30.0%
AATTGAATTCGGTAGTACTT+AGG + chr4_4:36366062-36366081 Msa0679000:intron 30.0%
ATTGAATTCGGTAGTACTTA+GGG + chr4_4:36366063-36366082 Msa0679000:intron 30.0%
CATAGCAAGAGAATTATTCA+CGG + chr4_4:36366166-36366185 Msa0679000:intron 30.0%
! AGCATGTTTTCCATTATTTC+CGG + chr4_4:36366233-36366252 Msa0679000:intron 30.0%
! TCATTTGTTAAAGTCAGCAT+CGG - chr4_4:36366608-36366627 None:intergenic 30.0%
GTTTATCATTCCATAATGGT+AGG - chr4_4:36366688-36366707 None:intergenic 30.0%
AATTCTGCTCCAATTATCAA+TGG + chr4_4:36366732-36366751 Msa0679000:CDS 30.0%
! TTTTATTGGAATTTGCAGGA+TGG + chr4_4:36367199-36367218 Msa0679000:intron 30.0%
TCTTTCTATGTTTCTTACAC+AGG + chr4_4:36367550-36367569 Msa0679000:intron 30.0%
!! ACACTCTAAGATAAAATTGG+TGG - chr4_4:36367670-36367689 None:intergenic 30.0%
!! AACAGTTCTGAACCAATAAT+GGG - chr4_4:36367817-36367836 None:intergenic 30.0%
ATCTAGGTAATGACATCATT+AGG + chr4_4:36367935-36367954 Msa0679000:three_prime_UTR 30.0%
TCTAGGTAATGACATCATTA+GGG + chr4_4:36367936-36367955 Msa0679000:three_prime_UTR 30.0%
AGATACAATCCAGTATACAA+AGG + chr4_4:36368190-36368209 Msa0679000:three_prime_UTR 30.0%
!! AGTTGTCATTTGAGTTGAAG+AGG + chr4_4:36363547-36363566 Msa0679000:five_prime_UTR 35.0%
! ACAATGTTCTGTCTTGTTGT+TGG + chr4_4:36363601-36363620 Msa0679000:CDS 35.0%
CAAATGGAGAAGATCCTTAT+AGG + chr4_4:36363645-36363664 Msa0679000:CDS 35.0%
CTTCAAATTATTAGCGGTGT+CGG + chr4_4:36363866-36363885 Msa0679000:intron 35.0%
! ATATGGTTTGTGAAATGTGC+AGG + chr4_4:36363916-36363935 Msa0679000:intron 35.0%
! TATGGTTTGTGAAATGTGCA+GGG + chr4_4:36363917-36363936 Msa0679000:intron 35.0%
ATGAACCTTTCCTCATTTCT+TGG + chr4_4:36364026-36364045 Msa0679000:CDS 35.0%
ACTAACCAAGAAATGAGGAA+AGG - chr4_4:36364034-36364053 None:intergenic 35.0%
ACAAGACTAACCAAGAAATG+AGG - chr4_4:36364039-36364058 None:intergenic 35.0%
TAATCTCGGACATGGATATA+AGG + chr4_4:36364254-36364273 Msa0679000:intron 35.0%
GGACCGTCAATATATTCTTA+AGG - chr4_4:36364390-36364409 None:intergenic 35.0%
ATAAATCGAACCATCCTCAA+AGG + chr4_4:36364503-36364522 Msa0679000:intron 35.0%
! TTGTATTGTTCCTTTGAGGA+TGG - chr4_4:36364516-36364535 None:intergenic 35.0%
TCGATTGTATTGTTCCTTTG+AGG - chr4_4:36364520-36364539 None:intergenic 35.0%
TCAAAGGAACAATACAATCG+AGG + chr4_4:36364519-36364538 Msa0679000:intron 35.0%
! CACGTCAGTTTTTATACTTG+CGG - chr4_4:36364633-36364652 None:intergenic 35.0%
! CACTGAATTTTCAACATGGA+TGG - chr4_4:36364735-36364754 None:intergenic 35.0%
ATATAAGTGAAGTTCTGTCC+TGG - chr4_4:36364849-36364868 None:intergenic 35.0%
! ATCAAAAGGTACAGGAATCA+CGG - chr4_4:36364973-36364992 None:intergenic 35.0%
ATCACTTCCGCTATCTAAAA+CGG - chr4_4:36365144-36365163 None:intergenic 35.0%
AACAGTGAATGTGTAAGCAT+TGG - chr4_4:36365207-36365226 None:intergenic 35.0%
TACACATTCACTGTTGATCA+AGG + chr4_4:36365212-36365231 Msa0679000:CDS 35.0%
CTGCTATGGTATCAAATTTC+AGG - chr4_4:36365266-36365285 None:intergenic 35.0%
AACTAATATCAGCTGGATCT+AGG - chr4_4:36365388-36365407 None:intergenic 35.0%
! TAAAGTGCTTGATTGTTTGC+AGG + chr4_4:36365595-36365614 Msa0679000:intron 35.0%
! AAAGTGCTTGATTGTTTGCA+GGG + chr4_4:36365596-36365615 Msa0679000:intron 35.0%
AGATTCCGGATATCAAATGT+GGG + chr4_4:36365628-36365647 Msa0679000:CDS 35.0%
TAATCCCCACATTTGATATC+CGG - chr4_4:36365636-36365655 None:intergenic 35.0%
!! CCCTTGAATTCTGAAATTGA+TGG - chr4_4:36365665-36365684 None:intergenic 35.0%
TGACTCACTTGACATTCATT+TGG + chr4_4:36365738-36365757 Msa0679000:CDS 35.0%
GACTCACTTGACATTCATTT+GGG + chr4_4:36365739-36365758 Msa0679000:CDS 35.0%
ACTCACTTGACATTCATTTG+GGG + chr4_4:36365740-36365759 Msa0679000:CDS 35.0%
!! GTATTCTGTATTGGTTACTG+CGG + chr4_4:36365768-36365787 Msa0679000:CDS 35.0%
ACAATGTAGTAGTCATTTGG+TGG - chr4_4:36365799-36365818 None:intergenic 35.0%
ACTACATTGTTGTCACAACA+AGG + chr4_4:36365809-36365828 Msa0679000:CDS 35.0%
CTTCATTATAGTAACTCAGC+AGG + chr4_4:36365865-36365884 Msa0679000:CDS 35.0%
TTGAATTCGGTAGTACTTAG+GGG + chr4_4:36366064-36366083 Msa0679000:intron 35.0%
AATTTACTTAACTACCACCG+AGG - chr4_4:36366134-36366153 None:intergenic 35.0%
ATAATATCCTTCGCAATTCG+CGG + chr4_4:36366280-36366299 Msa0679000:intron 35.0%
AAACTAATTCGCAGCAGTTA+CGG + chr4_4:36366354-36366373 Msa0679000:intron 35.0%
! AAGTAATCAGCTAGTTTGAG+TGG - chr4_4:36366807-36366826 None:intergenic 35.0%
CTGATTACTTCAAGATCGAA+GGG + chr4_4:36366817-36366836 Msa0679000:CDS 35.0%
TGATTACTTCAAGATCGAAG+GGG + chr4_4:36366818-36366837 Msa0679000:CDS 35.0%
TTATCTTCAGACTTCTGTCA+TGG + chr4_4:36366887-36366906 Msa0679000:CDS 35.0%
GACATAGCTTCTTTGTAGTA+GGG + chr4_4:36366985-36367004 Msa0679000:CDS 35.0%
! AGCATTAAGCCTTATCACAA+GGG - chr4_4:36367317-36367336 None:intergenic 35.0%
! AAGCATTAAGCCTTATCACA+AGG - chr4_4:36367318-36367337 None:intergenic 35.0%
TAGCATCATCTACAAACCAA+AGG - chr4_4:36367379-36367398 None:intergenic 35.0%
TACATGCCATTGGATAATGT+GGG + chr4_4:36367599-36367618 Msa0679000:CDS 35.0%
! TTCTGAACCAATAATGGGAA+AGG - chr4_4:36367812-36367831 None:intergenic 35.0%
!! GAACAGTTCTGAACCAATAA+TGG - chr4_4:36367818-36367837 None:intergenic 35.0%
TGTGCAGTAATGTGAATTGA+TGG + chr4_4:36368002-36368021 Msa0679000:three_prime_UTR 35.0%
TCATCGGGTAGAACAAATTA+GGG - chr4_4:36368102-36368121 None:intergenic 35.0%
TTCATCGGGTAGAACAAATT+AGG - chr4_4:36368103-36368122 None:intergenic 35.0%
CTGGATTGTATCTTTCTTTC+AGG - chr4_4:36368183-36368202 None:intergenic 35.0%
!! GACTGCTTTTCTTTGCACAA+AGG + chr4_4:36363464-36363483 Msa0679000:five_prime_UTR 40.0%
TTCCTTGTTGCATGTGCAAA+TGG + chr4_4:36363629-36363648 Msa0679000:CDS 40.0%
TCCACTTGGAGTTAAACAAC+AGG + chr4_4:36363703-36363722 Msa0679000:CDS 40.0%
! ACCTGTTGTTTAACTCCAAG+TGG - chr4_4:36363707-36363726 None:intergenic 40.0%
! ATGGTTTGTGAAATGTGCAG+GGG + chr4_4:36363918-36363937 Msa0679000:intron 40.0%
!! GTGCAGGGGATTTTGATAAA+TGG + chr4_4:36363932-36363951 Msa0679000:intron 40.0%
!! TTAGTCACTGACTCAATCTG+TGG - chr4_4:36363971-36363990 None:intergenic 40.0%
TTTCGACTTAATCTCGGACA+TGG + chr4_4:36364246-36364265 Msa0679000:intron 40.0%
ATGGATATAAGGTTGGAGTG+AGG + chr4_4:36364265-36364284 Msa0679000:intron 40.0%
TGGATATAAGGTTGGAGTGA+GGG + chr4_4:36364266-36364285 Msa0679000:intron 40.0%
ATTATTTGAGAGGGACTCGA+GGG - chr4_4:36364475-36364494 None:intergenic 40.0%
AATTATTTGAGAGGGACTCG+AGG - chr4_4:36364476-36364495 None:intergenic 40.0%
!! TAAAATCAGAGGTGTTAGGC+AGG - chr4_4:36364593-36364612 None:intergenic 40.0%
ACAAATTGTCCAATCTCTCC+AGG + chr4_4:36364828-36364847 Msa0679000:CDS 40.0%
AATATGGTGAAATCTCCGGA+TGG - chr4_4:36364999-36365018 None:intergenic 40.0%
ATCCGGAGATTTCACCATAT+TGG + chr4_4:36364998-36365017 Msa0679000:CDS 40.0%
TGCCAATATGGTGAAATCTC+CGG - chr4_4:36365003-36365022 None:intergenic 40.0%
! CATTGATGACAAGTCCATCA+GGG - chr4_4:36365175-36365194 None:intergenic 40.0%
! AAAATCGGCTTCATCTGCTA+TGG - chr4_4:36365280-36365299 None:intergenic 40.0%
GTTGAAGAGATAAGGGATTG+TGG - chr4_4:36365356-36365375 None:intergenic 40.0%
GTTAACTACTAGCGTGTAGA+CGG + chr4_4:36365405-36365424 Msa0679000:intron 40.0%
CAGATTCCGGATATCAAATG+TGG + chr4_4:36365627-36365646 Msa0679000:CDS 40.0%
GATTCCGGATATCAAATGTG+GGG + chr4_4:36365629-36365648 Msa0679000:CDS 40.0%
!! GCATAAGATGAAGCTTGTTG+AGG + chr4_4:36365684-36365703 Msa0679000:CDS 40.0%
!! TAAGATGAAGCTTGTTGAGG+TGG + chr4_4:36365687-36365706 Msa0679000:CDS 40.0%
CCTATCACATTATGTCGCAA+TGG - chr4_4:36366194-36366213 None:intergenic 40.0%
CCATTGCGACATAATGTGAT+AGG + chr4_4:36366191-36366210 Msa0679000:intron 40.0%
GCACAATGTTCCGGAAATAA+TGG - chr4_4:36366246-36366265 None:intergenic 40.0%
GTTAAGTGTGCACAATGTTC+CGG - chr4_4:36366255-36366274 None:intergenic 40.0%
TGTCCAATACTGACAATCGT+TGG + chr4_4:36366476-36366495 Msa0679000:intron 40.0%
TGTCCAACGATTGTCAGTAT+TGG - chr4_4:36366482-36366501 None:intergenic 40.0%
GCTGATTACTTCAAGATCGA+AGG + chr4_4:36366816-36366835 Msa0679000:CDS 40.0%
!!! GTTTTCACTTGGAAGTATCC+CGG + chr4_4:36366842-36366861 Msa0679000:CDS 40.0%
CTCCACAAAACCTCGAAAAT+CGG - chr4_4:36366916-36366935 None:intergenic 40.0%
! CATGATTGCAAAGTGTCTTC+AGG - chr4_4:36366954-36366973 None:intergenic 40.0%
CTGAAGACACTTTGCAATCA+TGG + chr4_4:36366952-36366971 Msa0679000:CDS 40.0%
TTGCAATCATGGCACATTGA+TGG + chr4_4:36366963-36366982 Msa0679000:CDS 40.0%
GGACATAGCTTCTTTGTAGT+AGG + chr4_4:36366984-36367003 Msa0679000:CDS 40.0%
ATGGAGGATACATGGTTTAC+GGG - chr4_4:36367083-36367102 None:intergenic 40.0%
CATGGAGGATACATGGTTTA+CGG - chr4_4:36367084-36367103 None:intergenic 40.0%
TATTTCGATCATGTTGCGCA+TGG - chr4_4:36367102-36367121 None:intergenic 40.0%
ATTGGAATTTGCAGGATGGA+TGG + chr4_4:36367203-36367222 Msa0679000:intron 40.0%
AATTGCTCGTAGTACAGTTC+AGG + chr4_4:36367274-36367293 Msa0679000:CDS 40.0%
TACAGTGAAGTCCATGACTT+TGG - chr4_4:36367581-36367600 None:intergenic 40.0%
GTACATGCCATTGGATAATG+TGG + chr4_4:36367598-36367617 Msa0679000:CDS 40.0%
CACATTCCCACATTATCCAA+TGG - chr4_4:36367608-36367627 None:intergenic 40.0%
CATTGGATAATGTGGGAATG+TGG + chr4_4:36367606-36367625 Msa0679000:CDS 40.0%
GAATGTGAGGTCTGAGAATT+GGG + chr4_4:36367628-36367647 Msa0679000:CDS 40.0%
AATTGGGCAAGACAGTACTT+GGG + chr4_4:36367644-36367663 Msa0679000:CDS 40.0%
TCATCTCTCACTGAATTTGC+AGG - chr4_4:36367698-36367717 None:intergenic 40.0%
GAAGTGCATTGCTTGGAATA+GGG - chr4_4:36367724-36367743 None:intergenic 40.0%
TGAAGTGCATTGCTTGGAAT+AGG - chr4_4:36367725-36367744 None:intergenic 40.0%
! ACCAATAATGGGAAAGGCAA+GGG - chr4_4:36367806-36367825 None:intergenic 40.0%
! AACCAATAATGGGAAAGGCA+AGG - chr4_4:36367807-36367826 None:intergenic 40.0%
TAATCACAACCCACACTAAG+CGG - chr4_4:36367910-36367929 None:intergenic 40.0%
GGTTGTGATTAGGTTCATCT+AGG + chr4_4:36367919-36367938 Msa0679000:three_prime_UTR 40.0%
TTACTGCACAGCTAGCAAAA+AGG - chr4_4:36367992-36368011 None:intergenic 40.0%
! TGTGAATTGATGGTTGTGAC+AGG + chr4_4:36368012-36368031 Msa0679000:three_prime_UTR 40.0%
! GTGAATTGATGGTTGTGACA+GGG + chr4_4:36368013-36368032 Msa0679000:three_prime_UTR 40.0%
GGTAGAACAAATTAGGGTGT+AGG - chr4_4:36368096-36368115 None:intergenic 40.0%
CTCCATTTGCACATGCAACA+AGG - chr4_4:36363634-36363653 None:intergenic 45.0%
GAAAACAGCTGGACAATGCA+TGG + chr4_4:36364192-36364211 Msa0679000:intron 45.0%
CTCGGACATGGATATAAGGT+TGG + chr4_4:36364258-36364277 Msa0679000:intron 45.0%
AAGTTCTGTCCTGGAGAGAT+TGG - chr4_4:36364840-36364859 None:intergenic 45.0%
TGCTGCCTTGTGAAAAGCAA+GGG - chr4_4:36364916-36364935 None:intergenic 45.0%
! GATGGAGGATCAAAAGGTAC+AGG - chr4_4:36364981-36365000 None:intergenic 45.0%
! GTACCTTTTGATCCTCCATC+CGG + chr4_4:36364981-36365000 Msa0679000:CDS 45.0%
GGAGATTTCACCATATTGGC+AGG + chr4_4:36365002-36365021 Msa0679000:CDS 45.0%
TCACCATATTGGCAGGAGAT+TGG + chr4_4:36365009-36365028 Msa0679000:CDS 45.0%
GTACCAATCTCCTGCCAATA+TGG - chr4_4:36365015-36365034 None:intergenic 45.0%
!! TTGAGGGCCGTTTTAGATAG+CGG + chr4_4:36365134-36365153 Msa0679000:CDS 45.0%
AGTGATCTTCCTTTCCCTGA+TGG + chr4_4:36365158-36365177 Msa0679000:CDS 45.0%
ATGACAAGTCCATCAGGGAA+AGG - chr4_4:36365170-36365189 None:intergenic 45.0%
! CCATTGATGACAAGTCCATC+AGG - chr4_4:36365176-36365195 None:intergenic 45.0%
!! CCTGATGGACTTGTCATCAA+TGG + chr4_4:36365173-36365192 Msa0679000:CDS 45.0%
!! ATGTGTAAGCATTGGAACCG+CGG - chr4_4:36365199-36365218 None:intergenic 45.0%
TATCGAGAAAAGCGGGTAGA+CGG - chr4_4:36365443-36365462 None:intergenic 45.0%
CAGGGAAGACTTACAGATTC+CGG + chr4_4:36365614-36365633 Msa0679000:intron 45.0%
!! ATGAAGCTTGTTGAGGTGGA+AGG + chr4_4:36365691-36365710 Msa0679000:CDS 45.0%
!! AACTCAGCAGGAAGTGTTTC+TGG + chr4_4:36365877-36365896 Msa0679000:CDS 45.0%
GACCAACCACTGAAATCGAT+TGG + chr4_4:36365914-36365933 Msa0679000:CDS 45.0%
! GACCAATCGATTTCAGTGGT+TGG - chr4_4:36365919-36365938 None:intergenic 45.0%
! AACGGACCAATCGATTTCAG+TGG - chr4_4:36365923-36365942 None:intergenic 45.0%
ATTGGTCCGTTGAACAAGCT+CGG + chr4_4:36365932-36365951 Msa0679000:CDS 45.0%
! TAGAGACCGAGCTTGTTCAA+CGG - chr4_4:36365941-36365960 None:intergenic 45.0%
TTGAACAAGCTCGGTCTCTA+AGG + chr4_4:36365941-36365960 Msa0679000:CDS 45.0%
ATGGAAAACATGCTCAGCAG+TGG - chr4_4:36366227-36366246 None:intergenic 45.0%
! CCTGAGATCGAAAGTGTGTT+TGG - chr4_4:36366505-36366524 None:intergenic 45.0%
CCAAACACACTTTCGATCTC+AGG + chr4_4:36366502-36366521 Msa0679000:intron 45.0%
CTCAGGTTTCCGTGTTTCAT+AGG + chr4_4:36366519-36366538 Msa0679000:intron 45.0%
AGGAGGAATCTTACAGCAAG+TGG + chr4_4:36366639-36366658 Msa0679000:intron 45.0%
! GTTCCTTGTGGATTTGGTCT+TGG - chr4_4:36366666-36366685 None:intergenic 45.0%
TGGTAGGTTCCTTGTGGATT+TGG - chr4_4:36366672-36366691 None:intergenic 45.0%
CCATAATGGTAGGTTCCTTG+TGG - chr4_4:36366678-36366697 None:intergenic 45.0%
CCACAAGGAACCTACCATTA+TGG + chr4_4:36366675-36366694 Msa0679000:CDS 45.0%
GTTTGAGTGGTGTATCAGCA+GGG - chr4_4:36366794-36366813 None:intergenic 45.0%
AGTTTGAGTGGTGTATCAGC+AGG - chr4_4:36366795-36366814 None:intergenic 45.0%
!!! ATCGAAGGGGTGTTTTCACT+TGG + chr4_4:36366831-36366850 Msa0679000:CDS 45.0%
TCTTCAGACTTCTGTCATGG+CGG + chr4_4:36366890-36366909 Msa0679000:CDS 45.0%
!! CGATTTTCGAGGTTTTGTGG+AGG + chr4_4:36366914-36366933 Msa0679000:CDS 45.0%
GTTCGCTATCCCTTGTGATA+AGG + chr4_4:36367305-36367324 Msa0679000:intron 45.0%
CACAGGTGTATCCAAAGTCA+TGG + chr4_4:36367567-36367586 Msa0679000:intron 45.0%
GACTTCACTGTACATGCCAT+TGG + chr4_4:36367589-36367608 Msa0679000:CDS 45.0%
ATGTGGGAATGTGGAATGTG+AGG + chr4_4:36367615-36367634 Msa0679000:CDS 45.0%
GGAATGTGAGGTCTGAGAAT+TGG + chr4_4:36367627-36367646 Msa0679000:CDS 45.0%
GAATTGGGCAAGACAGTACT+TGG + chr4_4:36367643-36367662 Msa0679000:CDS 45.0%
!! AGGCAAGGGTTTTGATATCC+TGG - chr4_4:36367792-36367811 None:intergenic 45.0%
ACCCTTGCCTTTCCCATTAT+TGG + chr4_4:36367802-36367821 Msa0679000:three_prime_UTR 45.0%
AATCACAACCCACACTAAGC+GGG - chr4_4:36367909-36367928 None:intergenic 45.0%
! GCTTAGTGTGGGTTGTGATT+AGG + chr4_4:36367909-36367928 Msa0679000:three_prime_UTR 45.0%
TGATGGTTGTGACAGGGTTA+CGG + chr4_4:36368019-36368038 Msa0679000:three_prime_UTR 45.0%
TTCTACCCGATGAATGACCT+GGG + chr4_4:36368109-36368128 Msa0679000:three_prime_UTR 45.0%
AGGAAACCCAGGTCATTCAT+CGG - chr4_4:36368118-36368137 None:intergenic 45.0%
AAGTACCATCACCTCATAGC+AGG - chr4_4:36368138-36368157 None:intergenic 45.0%
!! ATATAACTTTAATATTTATA+AGG + chr4_4:36367350-36367369 Msa0679000:intron 5.0%
!! TATAACTTTAATATTTATAA+GGG + chr4_4:36367351-36367370 Msa0679000:intron 5.0%
!!! TGTTAAAAATAATTTTTATA+GGG + chr4_4:36367878-36367897 Msa0679000:three_prime_UTR 5.0%
!! ATCAGAGGTGTTAGGCAGGT+TGG - chr4_4:36364589-36364608 None:intergenic 50.0%
!! ATAGGAATGGAGTGCTGCAG+AGG + chr4_4:36364775-36364794 Msa0679000:intron 50.0%
TGCTGCAGAGGAGAAACTCA+TGG + chr4_4:36364787-36364806 Msa0679000:CDS 50.0%
AGGAGAAACTCATGGCAGGA+TGG + chr4_4:36364795-36364814 Msa0679000:CDS 50.0%
TCATGGCAGGATGGAGTGTA+TGG + chr4_4:36364804-36364823 Msa0679000:CDS 50.0%
!! TCCCTCCCTTGCTTTTCACA+AGG + chr4_4:36364908-36364927 Msa0679000:CDS 50.0%
GCCTTGTGAAAAGCAAGGGA+GGG - chr4_4:36364912-36364931 None:intergenic 50.0%
TGCCTTGTGAAAAGCAAGGG+AGG - chr4_4:36364913-36364932 None:intergenic 50.0%
CTGCTGCCTTGTGAAAAGCA+AGG - chr4_4:36364917-36364936 None:intergenic 50.0%
!! CTTGCTTTTCACAAGGCAGC+AGG + chr4_4:36364915-36364934 Msa0679000:CDS 50.0%
TCTCCGGATGGAGGATCAAA+AGG - chr4_4:36364987-36365006 None:intergenic 50.0%
ATGGTGAAATCTCCGGATGG+AGG - chr4_4:36364996-36365015 None:intergenic 50.0%
ATCGAGAAAAGCGGGTAGAC+GGG - chr4_4:36365442-36365461 None:intergenic 50.0%
GGGGCAGACGTATTCTGTAT+TGG + chr4_4:36365759-36365778 Msa0679000:CDS 50.0%
CACAACAAGGTTCACCTCAC+AGG + chr4_4:36365822-36365841 Msa0679000:CDS 50.0%
!! AGTGTTTCTGGTCCTCTTCC+TGG + chr4_4:36365889-36365908 Msa0679000:CDS 50.0%
! ATTTCAGTGGTTGGTCCACC+AGG - chr4_4:36365910-36365929 None:intergenic 50.0%
CAACCACTTGCACTAGACCT+CGG + chr4_4:36366114-36366133 Msa0679000:intron 50.0%
CTATACACCGCGAATTGCGA+AGG - chr4_4:36366290-36366309 None:intergenic 50.0%
GGACCAAGACCAAATCCACA+AGG + chr4_4:36366660-36366679 Msa0679000:CDS 50.0%
!! GGCCGATTTTCGAGGTTTTG+TGG + chr4_4:36366911-36366930 Msa0679000:CDS 50.0%
TGTTGCGCATGGAGGATACA+TGG - chr4_4:36367091-36367110 None:intergenic 50.0%
TTCGATCATGTTGCGCATGG+AGG - chr4_4:36367099-36367118 None:intergenic 50.0%
GGAATTTGCAGGATGGATGG+AGG + chr4_4:36367206-36367225 Msa0679000:intron 50.0%
CCACACTGAAGTGCATTGCT+TGG - chr4_4:36367731-36367750 None:intergenic 50.0%
CCAAGCAATGCACTTCAGTG+TGG + chr4_4:36367728-36367747 Msa0679000:CDS 50.0%
CAATGCACTTCAGTGTGGCA+AGG + chr4_4:36367733-36367752 Msa0679000:CDS 50.0%
GTTCTACCCGATGAATGACC+TGG + chr4_4:36368108-36368127 Msa0679000:three_prime_UTR 50.0%
GGAAACCCAGGTCATTCATC+GGG - chr4_4:36368117-36368136 None:intergenic 50.0%
GGTTTCCTGCTATGAGGTGA+TGG + chr4_4:36368130-36368149 Msa0679000:three_prime_UTR 50.0%
! ACTGACTCAATCTGTGGCCC+TGG - chr4_4:36363965-36363984 None:intergenic 55.0%
GCAGAGGAGAAACTCATGGC+AGG + chr4_4:36364791-36364810 Msa0679000:CDS 55.0%
! GCTTTTCACAAGGCAGCAGG+AGG + chr4_4:36364918-36364937 Msa0679000:CDS 55.0%
CACAAGGCAGCAGGAGGTTA+TGG + chr4_4:36364924-36364943 Msa0679000:CDS 55.0%
AAGGCAGCAGGAGGTTATGG+CGG + chr4_4:36364927-36364946 Msa0679000:CDS 55.0%
GGACTTGTCATCAATGGCCG+CGG + chr4_4:36365179-36365198 Msa0679000:CDS 55.0%
! TGAAGCATTCAGCGCCTGTG+AGG - chr4_4:36365839-36365858 None:intergenic 55.0%
!! GTTTCTGGTCCTCTTCCTGG+TGG + chr4_4:36365892-36365911 Msa0679000:CDS 55.0%
CGAGGTCTAGTGCAAGTGGT+TGG - chr4_4:36366116-36366135 None:intergenic 55.0%
CTGAAGATAACCACCGCCAC+CGG - chr4_4:36366877-36366896 None:intergenic 55.0%
GCAGGATGGATGGAGGACAA+TGG + chr4_4:36367213-36367232 Msa0679000:intron 55.0%
ACTTCAGTGTGGCAAGGCAG+TGG + chr4_4:36367739-36367758 Msa0679000:CDS 55.0%
CTTCAGTGTGGCAAGGCAGT+GGG + chr4_4:36367740-36367759 Msa0679000:CDS 55.0%
GACCTGGGTTTCCTGCTATG+AGG + chr4_4:36368124-36368143 Msa0679000:three_prime_UTR 55.0%
CACCTCATAGCAGGAAACCC+AGG - chr4_4:36368129-36368148 None:intergenic 55.0%
! GTGGTTGGTCCACCAGGAAG+AGG - chr4_4:36365904-36365923 None:intergenic 60.0%
CCACCGAGGTCTAGTGCAAG+TGG - chr4_4:36366120-36366139 None:intergenic 60.0%
CCACTTGCACTAGACCTCGG+TGG + chr4_4:36366117-36366136 Msa0679000:intron 60.0%
AGTATCCCGGACAACCCCAC+CGG + chr4_4:36366855-36366874 Msa0679000:CDS 60.0%
AGATAACCACCGCCACCGGT+GGG - chr4_4:36366873-36366892 None:intergenic 60.0%
AAGATAACCACCGCCACCGG+TGG - chr4_4:36366874-36366893 None:intergenic 60.0%
!! GTCATGGCGGCCGATTTTCG+AGG + chr4_4:36366903-36366922 Msa0679000:CDS 60.0%
GATAACCACCGCCACCGGTG+GGG - chr4_4:36366872-36366891 None:intergenic 65.0%
AGGGGATGGCCCGCTTAGTG+TGG + chr4_4:36367897-36367916 Msa0679000:three_prime_UTR 65.0%
GGGGATGGCCCGCTTAGTGT+GGG + chr4_4:36367898-36367917 Msa0679000:three_prime_UTR 65.0%
ATCCCGGACAACCCCACCGG+TGG + chr4_4:36366858-36366877 Msa0679000:CDS 70.0%
CGCCACCGGTGGGGTTGTCC+GGG - chr4_4:36366863-36366882 None:intergenic 75.0%
CCGCCACCGGTGGGGTTGTC+CGG - chr4_4:36366864-36366883 None:intergenic 75.0%
CCGGACAACCCCACCGGTGG+CGG + chr4_4:36366861-36366880 Msa0679000:CDS 75.0%
! GACAACCCCACCGGTGGCGG+TGG + chr4_4:36366864-36366883 Msa0679000:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 36363400 36368220 36363400 ID=Msa0679000;Name=Msa0679000
chr4_4 mRNA 36363400 36368220 36363400 ID=Msa0679000-mRNA-1;Parent=Msa0679000;Name=Msa0679000-mRNA-1;_AED=0.05;_eAED=0.05;_QI=187|1|1|1|1|1|8|445|538
chr4_4 exon 36363400 36363724 36363400 ID=Msa0679000-mRNA-1:exon:8537;Parent=Msa0679000-mRNA-1
chr4_4 exon 36363938 36364047 36363938 ID=Msa0679000-mRNA-1:exon:8538;Parent=Msa0679000-mRNA-1
chr4_4 exon 36364779 36365049 36364779 ID=Msa0679000-mRNA-1:exon:8539;Parent=Msa0679000-mRNA-1
chr4_4 exon 36365131 36365233 36365131 ID=Msa0679000-mRNA-1:exon:8540;Parent=Msa0679000-mRNA-1
chr4_4 exon 36365617 36365962 36365617 ID=Msa0679000-mRNA-1:exon:8541;Parent=Msa0679000-mRNA-1
chr4_4 exon 36366641 36367006 36366641 ID=Msa0679000-mRNA-1:exon:8542;Parent=Msa0679000-mRNA-1
chr4_4 exon 36367217 36367295 36367217 ID=Msa0679000-mRNA-1:exon:8543;Parent=Msa0679000-mRNA-1
chr4_4 exon 36367572 36368220 36367572 ID=Msa0679000-mRNA-1:exon:8544;Parent=Msa0679000-mRNA-1
chr4_4 five_prime_UTR 36363400 36363586 36363400 ID=Msa0679000-mRNA-1:five_prime_utr;Parent=Msa0679000-mRNA-1
chr4_4 CDS 36363587 36363724 36363587 ID=Msa0679000-mRNA-1:cds;Parent=Msa0679000-mRNA-1
chr4_4 CDS 36363938 36364047 36363938 ID=Msa0679000-mRNA-1:cds;Parent=Msa0679000-mRNA-1
chr4_4 CDS 36364779 36365049 36364779 ID=Msa0679000-mRNA-1:cds;Parent=Msa0679000-mRNA-1
chr4_4 CDS 36365131 36365233 36365131 ID=Msa0679000-mRNA-1:cds;Parent=Msa0679000-mRNA-1
chr4_4 CDS 36365617 36365962 36365617 ID=Msa0679000-mRNA-1:cds;Parent=Msa0679000-mRNA-1
chr4_4 CDS 36366641 36367006 36366641 ID=Msa0679000-mRNA-1:cds;Parent=Msa0679000-mRNA-1
chr4_4 CDS 36367217 36367295 36367217 ID=Msa0679000-mRNA-1:cds;Parent=Msa0679000-mRNA-1
chr4_4 CDS 36367572 36367775 36367572 ID=Msa0679000-mRNA-1:cds;Parent=Msa0679000-mRNA-1
chr4_4 three_prime_UTR 36367776 36368220 36367776 ID=Msa0679000-mRNA-1:three_prime_utr;Parent=Msa0679000-mRNA-1
Gene Sequence

>Msa0679000

ATGGGTTACTTCAAACAATGTTCTGTCTTGTTGTTGGTAGTGTTCCTTGTTGCATGTGCAAATGGAGAAGATCCTTATAGGTTTTATAATTGGAATGTTACATATGGAGATATTTATCCACTTGGAGTTAAACAACAGGGGATTTTGATAAATGGACAATTTCCAGGGCCACAGATTGAGTCAGTGACTAATGATAATTTGATTATCAATGTTTTTAATAGCTTGGATGAACCTTTCCTCATTTCTTGGAATGGAGTGCTGCAGAGGAGAAACTCATGGCAGGATGGAGTGTATGGTACAAATTGTCCAATCTCTCCAGGACAGAACTTCACTTATATTCTTCAAGTAAAAGATCAGATTGGTAGCTACTTCTACTTTCCCTCCCTTGCTTTTCACAAGGCAGCAGGAGGTTATGGCGGTTTCACAATCGCTAGTCGCTCCGTGATTCCTGTACCTTTTGATCCTCCATCCGGAGATTTCACCATATTGGCAGGAGATTGGTACAAAAGAAATCACACAGATTTGAGGGCCGTTTTAGATAGCGGAAGTGATCTTCCTTTCCCTGATGGACTTGTCATCAATGGCCGCGGTTCCAATGCTTACACATTCACTGTTGATCAAGGGAAGACTTACAGATTCCGGATATCAAATGTGGGGATTACCACATCCATCAATTTCAGAATTCAAGGGCATAAGATGAAGCTTGTTGAGGTGGAAGGAAGTCACACTTTGCAAAACACTTATGACTCACTTGACATTCATTTGGGGCAGACGTATTCTGTATTGGTTACTGCGGATCAACCACCAAATGACTACTACATTGTTGTCACAACAAGGTTCACCTCACAGGCGCTGAATGCTTCATCCATTCTTCATTATAGTAACTCAGCAGGAAGTGTTTCTGGTCCTCTTCCTGGTGGACCAACCACTGAAATCGATTGGTCCGTTGAACAAGCTCGGTCTCTAAGGAGGAATCTTACAGCAAGTGGACCAAGACCAAATCCACAAGGAACCTACCATTATGGAATGATAAACACAACTCGTACAATTAGACTTCAAAATTCTGCTCCAATTATCAATGGAAAACAAAGATATGCTGTCAATAGTGTGTCATTCATCCCTGCTGATACACCACTCAAACTAGCTGATTACTTCAAGATCGAAGGGGTGTTTTCACTTGGAAGTATCCCGGACAACCCCACCGGTGGCGGTGGTTATCTTCAGACTTCTGTCATGGCGGCCGATTTTCGAGGTTTTGTGGAGGTTGTGTTTGAGAATCCTGAAGACACTTTGCAATCATGGCACATTGATGGACATAGCTTCTTTGTAGTAGGGATGGATGGAGGACAATGGTCAGCTGCAAGCAGACTAAATTACAACTTAAGAGATACAATTGCTCGTAGTACAGTTCAGGTGTATCCAAAGTCATGGACTTCACTGTACATGCCATTGGATAATGTGGGAATGTGGAATGTGAGGTCTGAGAATTGGGCAAGACAGTACTTGGGCCACCAATTTTATCTTAGAGTGTATTCACCTGCAAATTCAGTGAGAGATGAGTACCCTATTCCAAGCAATGCACTTCAGTGTGGCAAGGCAGTGGGTCACCACAATTAG
Protein sequence

>Msa0679000

MGYFKQCSVLLLVVFLVACANGEDPYRFYNWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIINVFNSLDEPFLISWNGVLQRRNSWQDGVYGTNCPISPGQNFTYILQVKDQIGSYFYFPSLAFHKAAGGYGGFTIASRSVIPVPFDPPSGDFTILAGDWYKRNHTDLRAVLDSGSDLPFPDGLVINGRGSNAYTFTVDQGKTYRFRISNVGITTSINFRIQGHKMKLVEVEGSHTLQNTYDSLDIHLGQTYSVLVTADQPPNDYYIVVTTRFTSQALNASSILHYSNSAGSVSGPLPGGPTTEIDWSVEQARSLRRNLTASGPRPNPQGTYHYGMINTTRTIRLQNSAPIINGKQRYAVNSVSFIPADTPLKLADYFKIEGVFSLGSIPDNPTGGGGYLQTSVMAADFRGFVEVVFENPEDTLQSWHIDGHSFFVVGMDGGQWSAASRLNYNLRDTIARSTVQVYPKSWTSLYMPLDNVGMWNVRSENWARQYLGHQFYLRVYSPANSVRDEYPIPSNALQCGKAVGHHN*