Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715360 | XP_003611798.1 | 96.290 | 566 | 21 | 0 | 1 | 566 | 1 | 566 | 0.0 | 1135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715360 | sp|Q2YDW2|MSTO1_MOUSE | 29.422 | 588 | 326 | 21 | 2 | 552 | 6 | 541 | 3.59e-55 | 198 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715360 | G7K831 | 96.290 | 566 | 21 | 0 | 1 | 566 | 1 | 566 | 0.0 | 1135 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0715360 | Msa0772790 | 0.896986 | 2.176019e-76 | -8.615850e-47 |
| Msa0715360 | Msa0798270 | 0.949022 | 2.941509e-107 | -8.615850e-47 |
| Msa0388030 | Msa0715360 | 0.809391 | 1.936368e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715360 | MtrunA17_Chr5g0402621 | 96.290 | 566 | 21 | 0 | 1 | 566 | 1 | 566 | 0.0 | 1135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0715360 | AT4G37190.1 | 60.315 | 572 | 211 | 10 | 1 | 566 | 1 | 562 | 0.0 | 684 |
| Msa0715360 | AT4G37190.2 | 59.506 | 526 | 197 | 10 | 47 | 566 | 1 | 516 | 0.0 | 606 |
Find 215 sgRNAs with CRISPR-Local
Find 547 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCACTTCTGGAACTTTC+AGG | 0.092542 | 5_1:-8408949 | Msa0715360:intron |
| TGTGACTCCCTGCTGATTTA+TGG | 0.148672 | 5_1:-8402115 | Msa0715360:three_prime_UTR |
| CAGTGCTGTCTTGCCACTTT+TGG | 0.164507 | 5_1:-8402531 | Msa0715360:CDS |
| GCAGATGCATGTTCTGTTTC+CGG | 0.189678 | 5_1:-8404611 | Msa0715360:CDS |
| ATCTTCAATATGGAGGAATT+TGG | 0.226999 | 5_1:+8404721 | None:intergenic |
| TCGTCTCATTTACCATATTT+TGG | 0.235592 | 5_1:+8406130 | None:intergenic |
| CGGTGCCGGCGCGAGTTTGC+AGG | 0.251780 | 5_1:+8409181 | None:intergenic |
| TAGAAAATGGAGTTCAGTTT+TGG | 0.252305 | 5_1:-8406062 | Msa0715360:CDS |
| GGACTTATACAAATGTTATC+AGG | 0.261492 | 5_1:-8404572 | Msa0715360:CDS |
| CAACTTCTTTGCTTAGTCTA+AGG | 0.274024 | 5_1:-8409125 | Msa0715360:intron |
| TGAGGATGGTGAAGACTTAC+AGG | 0.280581 | 5_1:-8404360 | Msa0715360:CDS |
| GCAGAATATGGTGTCAATTC+TGG | 0.281142 | 5_1:-8404540 | Msa0715360:CDS |
| TAGAATGCATACATTGTTCT+TGG | 0.281636 | 5_1:-8402341 | Msa0715360:three_prime_UTR |
| CAGATGCATGTTCTGTTTCC+GGG | 0.286418 | 5_1:-8404610 | Msa0715360:CDS |
| CAAAGTCTATATGAATTAAA+TGG | 0.286733 | 5_1:-8406009 | Msa0715360:CDS |
| TTGCCATTTCCATCAATCTT+TGG | 0.287116 | 5_1:-8402665 | Msa0715360:CDS |
| CTTCTTCATAAAGGCTTTGT+AGG | 0.287139 | 5_1:+8406157 | None:intergenic |
| AGAAGCTTTGGCAACGGGTT+AGG | 0.288799 | 5_1:+8409207 | None:intergenic |
| CTGTATACTGTCCGTGGTTC+TGG | 0.293409 | 5_1:-8405196 | Msa0715360:CDS |
| ACTACGTTGGCTCTCACTTC+TGG | 0.294135 | 5_1:-8408959 | Msa0715360:CDS |
| ACAAATTTGACCAATGCTTC+AGG | 0.296433 | 5_1:-8402273 | Msa0715360:three_prime_UTR |
| TTACTTAGGGGTTGGGGCTT+CGG | 0.298253 | 5_1:-8402449 | Msa0715360:CDS |
| ATTTAATTCATATAGACTTT+GGG | 0.304529 | 5_1:+8406011 | None:intergenic |
| GGCAGAGTTACTTAGGGGTT+GGG | 0.317124 | 5_1:-8402456 | Msa0715360:CDS |
| CATTTAATTCATATAGACTT+TGG | 0.317416 | 5_1:+8406010 | None:intergenic |
| GCAGAGTTACTTAGGGGTTG+GGG | 0.322990 | 5_1:-8402455 | Msa0715360:CDS |
| GCAGGAGATGTTGTCTAAAA+TGG | 0.331192 | 5_1:-8402405 | Msa0715360:CDS |
| GCTGCGGCGGAGGGCGGTGC+CGG | 0.340630 | 5_1:+8409167 | None:intergenic |
| TATATGAATTAAATGGAGTT+TGG | 0.341239 | 5_1:-8406002 | Msa0715360:CDS |
| GGCCGAGAAGCTTTGGCAAC+GGG | 0.342188 | 5_1:+8409202 | None:intergenic |
| GAAGCTTTGGCAACGGGTTA+GGG | 0.345391 | 5_1:+8409208 | None:intergenic |
| ATAACTGAGAGTCTAGAAAA+TGG | 0.346244 | 5_1:-8406075 | Msa0715360:CDS |
| ATTCCACAGAAGCTGGTTCT+AGG | 0.346774 | 5_1:-8402061 | Msa0715360:three_prime_UTR |
| AATGTTTCTCATCTTCAATA+TGG | 0.349867 | 5_1:+8404711 | None:intergenic |
| ATACGAGCCTCTTCATTTGC+TGG | 0.352777 | 5_1:-8401999 | Msa0715360:three_prime_UTR |
| CCGCTGGGGCAGAGTTACTT+AGG | 0.355124 | 5_1:-8402463 | Msa0715360:CDS |
| TGAAGAAGAAAACCAAAATA+TGG | 0.355969 | 5_1:-8406142 | Msa0715360:CDS |
| TTTCTGAGGTTCAGAGGCTT+GGG | 0.366033 | 5_1:+8406191 | None:intergenic |
| CACCATCCTCAGAAATCATT+GGG | 0.366232 | 5_1:+8404372 | None:intergenic |
| GTTTGCAGGCCGAGAAGCTT+TGG | 0.368102 | 5_1:+8409195 | None:intergenic |
| CCTCTTCATTTGCTGGTTGA+AGG | 0.369533 | 5_1:-8401992 | Msa0715360:three_prime_UTR |
| ACCTGGTTTCCAAAGATTGA+TGG | 0.371139 | 5_1:+8402656 | None:intergenic |
| CTCACGCGGTACACTGTATA+AGG | 0.380266 | 5_1:-8406736 | Msa0715360:CDS |
| AGGGCAAGGACGGCAGAATA+TGG | 0.381979 | 5_1:-8404552 | Msa0715360:CDS |
| ATGCCAACACCTGCTTTAAC+AGG | 0.384456 | 5_1:-8404509 | Msa0715360:intron |
| CTTAAGGAGGGCAGGCCAAC+AGG | 0.386393 | 5_1:+8405073 | None:intergenic |
| AACCCGTTGCCAAAGCTTCT+CGG | 0.393612 | 5_1:-8409204 | Msa0715360:five_prime_UTR |
| GGGCAGAGTTACTTAGGGGT+TGG | 0.400102 | 5_1:-8402457 | Msa0715360:CDS |
| AGCACTGCTGGAACGTAATC+TGG | 0.402144 | 5_1:+8402547 | None:intergenic |
| GATGGAAATGGCAAGGGAAT+AGG | 0.403632 | 5_1:+8402674 | None:intergenic |
| AATTGTTAGGATGAGTTGAT+TGG | 0.407131 | 5_1:-8408791 | Msa0715360:intron |
| AGAAGAATTGGTGGAAATGC+AGG | 0.412772 | 5_1:-8402423 | Msa0715360:CDS |
| GTCCATGGAGCTCTTGCATC+AGG | 0.412777 | 5_1:-8404320 | Msa0715360:intron |
| ACGAATTGAACTCAATACTT+TGG | 0.415751 | 5_1:+8409298 | None:intergenic |
| CGCTGGGGCAGAGTTACTTA+GGG | 0.418222 | 5_1:-8402462 | Msa0715360:CDS |
| GCAACGGGTTAGGGGTTATG+AGG | 0.427858 | 5_1:+8409217 | None:intergenic |
| ACAGGCAGTAGCTGCGGCGG+AGG | 0.429656 | 5_1:+8409157 | None:intergenic |
| TTTCCAAAGATTGATGGAAA+TGG | 0.432823 | 5_1:+8402662 | None:intergenic |
| TCACCATCCTCAGAAATCAT+TGG | 0.433648 | 5_1:+8404371 | None:intergenic |
| GCATCTGCAGTAGGCCCAAC+TGG | 0.433776 | 5_1:+8404626 | None:intergenic |
| AGGTACAATAAGTTTACAAT+AGG | 0.436193 | 5_1:+8405093 | None:intergenic |
| GGAATTACACGAGGAGCCGC+TGG | 0.438144 | 5_1:-8402479 | Msa0715360:CDS |
| CAAATTTGACCAATGCTTCA+GGG | 0.438473 | 5_1:-8402272 | Msa0715360:three_prime_UTR |
| ACCAGCTTCTGTGGAATGTT+AGG | 0.441447 | 5_1:+8402067 | None:intergenic |
| GCCTAACATTCCACAGAAGC+TGG | 0.448437 | 5_1:-8402068 | Msa0715360:three_prime_UTR |
| CTGACTAATTCTTCATCAAA+AGG | 0.458128 | 5_1:-8402602 | Msa0715360:CDS |
| CCTTTCCGAATGGCACCAGT+TGG | 0.458182 | 5_1:-8404641 | Msa0715360:CDS |
| AAGTGGCAAGACAGCACTGC+TGG | 0.459707 | 5_1:+8402535 | None:intergenic |
| GGGCTTCGGAAAAGAAGAAT+TGG | 0.464539 | 5_1:-8402435 | Msa0715360:CDS |
| TTTAATGCTCCCCACCCTCA+TGG | 0.465675 | 5_1:-8402240 | Msa0715360:three_prime_UTR |
| CTGTCCGTGGTTCTGGTCCA+CGG | 0.472037 | 5_1:-8405189 | Msa0715360:CDS |
| CTCTCATGTTTATTGAGAGC+AGG | 0.472683 | 5_1:+8407972 | None:intergenic |
| AGCACAGGCAGTAGCTGCGG+CGG | 0.476587 | 5_1:+8409154 | None:intergenic |
| GGAAACCAGGTTGGCAAGTA+CGG | 0.476756 | 5_1:-8402644 | Msa0715360:CDS |
| GCGAGGCTCCATAAATCAGC+AGG | 0.478652 | 5_1:+8402107 | None:intergenic |
| CTTTCCGAATGGCACCAGTT+GGG | 0.483983 | 5_1:-8404640 | Msa0715360:CDS |
| TGGTTCTCCAAGCGAGTACC+AGG | 0.485969 | 5_1:-8406106 | Msa0715360:CDS |
| TCCATCAATCTTTGGAAACC+AGG | 0.486391 | 5_1:-8402657 | Msa0715360:CDS |
| TGAACACTGAATCAGCTTGA+GGG | 0.486583 | 5_1:+8408756 | None:intergenic |
| GACAACGAGCAACAGATAGA+TGG | 0.486712 | 5_1:+8402702 | None:intergenic |
| CTTATCAACGTGCCGATACA+AGG | 0.490367 | 5_1:-8402736 | Msa0715360:CDS |
| CTGCAAAATCTTCACCGGTA+TGG | 0.490474 | 5_1:-8402500 | Msa0715360:CDS |
| AAGGGGAAGAAATTAGTGAT+AGG | 0.492804 | 5_1:-8405918 | Msa0715360:CDS |
| CACGGGCACGTCTTCAGAGC+CGG | 0.493267 | 5_1:-8405171 | Msa0715360:CDS |
| GCAGTAGCTGCGGCGGAGGG+CGG | 0.496032 | 5_1:+8409161 | None:intergenic |
| TCCCTATCCTGGTACTCGCT+TGG | 0.496520 | 5_1:+8406099 | None:intergenic |
| ATTCACCGTACTTGCCAACC+TGG | 0.496792 | 5_1:+8402639 | None:intergenic |
| AATGGAGTTTGGACAGATGT+TGG | 0.497176 | 5_1:-8405991 | Msa0715360:CDS |
| CAACAAGAACCCTGAAGCAT+TGG | 0.497764 | 5_1:+8402263 | None:intergenic |
| CAGAGCAAAGCACCCGAGTA+GGG | 0.498811 | 5_1:+8402136 | None:intergenic |
| GAATTAACTGTTGTTTCCAA+TGG | 0.500431 | 5_1:-8401932 | Msa0715360:three_prime_UTR |
| GAAGTGAGGGAACATTTGTA+AGG | 0.500975 | 5_1:-8402306 | Msa0715360:three_prime_UTR |
| ATTGTTAGGATGAGTTGATT+GGG | 0.502881 | 5_1:-8408790 | Msa0715360:intron |
| TTGACAATTATGGAATTGGA+AGG | 0.509591 | 5_1:-8405963 | Msa0715360:CDS |
| AAGAAGTTGTCGCAGAGCAC+AGG | 0.510460 | 5_1:+8409139 | None:intergenic |
| GGAACGTAATCTGGCAGCCA+TGG | 0.511067 | 5_1:+8402556 | None:intergenic |
| TGCAGGTTATACTCCAAAAG+TGG | 0.515606 | 5_1:+8402518 | None:intergenic |
| TGTCCGTGGTTCTGGTCCAC+GGG | 0.516322 | 5_1:-8405188 | Msa0715360:CDS |
| AAAATTTAGTTACCTGTACA+TGG | 0.517359 | 5_1:+8405869 | None:intergenic |
| TAGGCCCAACTGGTGCCATT+CGG | 0.517392 | 5_1:+8404636 | None:intergenic |
| TACACTTACTTAAGGAGGGC+AGG | 0.522088 | 5_1:+8405065 | None:intergenic |
| CTGAGGTTCAGAGGCTTGGG+TGG | 0.522798 | 5_1:+8406194 | None:intergenic |
| ATTGAACACTTGACAGTCCA+TGG | 0.523957 | 5_1:-8404335 | Msa0715360:CDS |
| ATTATTACACTTACTTAAGG+AGG | 0.526128 | 5_1:+8405060 | None:intergenic |
| TCAAATGTACCTGTTAAAGC+AGG | 0.526645 | 5_1:+8404500 | None:intergenic |
| TGAAGGACATAAGCTCAGGC+TGG | 0.528396 | 5_1:-8401975 | Msa0715360:three_prime_UTR |
| CTCGGCCTGCAAACTCGCGC+CGG | 0.533190 | 5_1:-8409186 | Msa0715360:five_prime_UTR |
| TGAGTTGATTGGGTTGGCCG+CGG | 0.533596 | 5_1:-8408780 | Msa0715360:CDS |
| GCTGAACAACGGCCTTGTAT+CGG | 0.535061 | 5_1:+8402724 | None:intergenic |
| CAATTTGTAGTTGATGACTC+TGG | 0.535303 | 5_1:-8405289 | Msa0715360:CDS |
| CCACCTAGAACCAGCTTCTG+TGG | 0.536731 | 5_1:+8402058 | None:intergenic |
| ACGAAAATCAACCATGAGGG+TGG | 0.538082 | 5_1:+8402229 | None:intergenic |
| TAGATAATTTAATTACAAAG+AGG | 0.539106 | 5_1:-8409276 | Msa0715360:five_prime_UTR |
| GTGAAAACGTCTGATGTTGC+GGG | 0.539190 | 5_1:+8406705 | None:intergenic |
| TTTAATTCATATAGACTTTG+GGG | 0.539516 | 5_1:+8406012 | None:intergenic |
| TTGAACACTGAATCAGCTTG+AGG | 0.539854 | 5_1:+8408755 | None:intergenic |
| TAATCTGGCAGCCATGGGAA+TGG | 0.540622 | 5_1:+8402562 | None:intergenic |
| CAATATCAATGACAATGTGT+TGG | 0.540879 | 5_1:-8401899 | Msa0715360:three_prime_UTR |
| GAAATTGTAACAATTCAAGT+TGG | 0.545120 | 5_1:-8408993 | Msa0715360:CDS |
| TGACGTCCATTCCATTCCCA+TGG | 0.546107 | 5_1:-8402573 | Msa0715360:CDS |
| ACAGAGCAAAGCACCCGAGT+AGG | 0.546325 | 5_1:+8402135 | None:intergenic |
| GACTTATACAAATGTTATCA+GGG | 0.547808 | 5_1:-8404571 | Msa0715360:CDS |
| GAAATGGCAAGGGAATAGGC+AGG | 0.548677 | 5_1:+8402678 | None:intergenic |
| GAATTACACGAGGAGCCGCT+GGG | 0.549048 | 5_1:-8402478 | Msa0715360:CDS |
| GAAAATCAACCATGAGGGTG+GGG | 0.550467 | 5_1:+8402231 | None:intergenic |
| CAGGCAGTAGCTGCGGCGGA+GGG | 0.551509 | 5_1:+8409158 | None:intergenic |
| TCAATCTTTGGAAACCAGGT+TGG | 0.552398 | 5_1:-8402653 | Msa0715360:CDS |
| ATGTTCTGTTTCCGGGGCTG+TGG | 0.553495 | 5_1:-8404603 | Msa0715360:CDS |
| CGAAAATCAACCATGAGGGT+GGG | 0.555427 | 5_1:+8402230 | None:intergenic |
| AGGCCGAGAAGCTTTGGCAA+CGG | 0.556337 | 5_1:+8409201 | None:intergenic |
| CGCGTGAGCTCATAGATCCA+AGG | 0.557446 | 5_1:+8406751 | None:intergenic |
| TGTAAACTTATTGTACCTGT+TGG | 0.557536 | 5_1:-8405088 | Msa0715360:CDS |
| CATTCGGAAAGGAAGACTAA+TGG | 0.557822 | 5_1:+8404652 | None:intergenic |
| ATATTGATAATACAATCCAT+TGG | 0.557944 | 5_1:+8401916 | None:intergenic |
| CATTAGTCTTCCTTTCCGAA+TGG | 0.563805 | 5_1:-8404651 | Msa0715360:CDS |
| CGGACAGTATACAGCATGAC+AGG | 0.563889 | 5_1:+8405205 | None:intergenic |
| TTGATGAAGAATTAGTCAGT+TGG | 0.566061 | 5_1:+8402606 | None:intergenic |
| ATGGATGTGCTTTATCGTAC+CGG | 0.566595 | 5_1:-8408716 | Msa0715360:CDS |
| TCTCAGTTATATCCCTATCC+TGG | 0.568673 | 5_1:+8406088 | None:intergenic |
| CTCTGGTGGTTTCTCCTCCG+TGG | 0.572222 | 5_1:-8405272 | Msa0715360:CDS |
| TCAGAAATCATTGGGGTCAA+CGG | 0.572224 | 5_1:+8404380 | None:intergenic |
| TCGTACCGGTCAGACACTAC+AGG | 0.572241 | 5_1:-8408702 | Msa0715360:intron |
| AAAGATTGATGGAAATGGCA+AGG | 0.572697 | 5_1:+8402667 | None:intergenic |
| TCCAAGCGAGTACCAGGATA+GGG | 0.573632 | 5_1:-8406100 | Msa0715360:CDS |
| TGACAATTATGGAATTGGAA+GGG | 0.574547 | 5_1:-8405962 | Msa0715360:CDS |
| TGGTTGAAGGACATAAGCTC+AGG | 0.574648 | 5_1:-8401979 | Msa0715360:three_prime_UTR |
| GAACGTAATCTGGCAGCCAT+GGG | 0.575562 | 5_1:+8402557 | None:intergenic |
| ATGTTTATTGAGAGCAGGCG+AGG | 0.575569 | 5_1:+8407977 | None:intergenic |
| TGGCAGCCATGGGAATGGAA+TGG | 0.577348 | 5_1:+8402567 | None:intergenic |
| CTCCAAGCGAGTACCAGGAT+AGG | 0.580050 | 5_1:-8406101 | Msa0715360:CDS |
| GTTTCTCATCTTCAATATGG+AGG | 0.582054 | 5_1:+8404714 | None:intergenic |
| TGTGAAAACGTCTGATGTTG+CGG | 0.582493 | 5_1:+8406704 | None:intergenic |
| TTAGGATGAGTTGATTGGGT+TGG | 0.585852 | 5_1:-8408786 | Msa0715360:intron |
| CAAGGTTAACCACACGGGCG+AGG | 0.587540 | 5_1:+8402090 | None:intergenic |
| ATAACCTGCAAAATCTTCAC+CGG | 0.588345 | 5_1:-8402505 | Msa0715360:CDS |
| TGTTAAAGCAGGTGTTGGCA+TGG | 0.588553 | 5_1:+8404511 | None:intergenic |
| TGGGAATGGAATGGACGTCA+AGG | 0.591641 | 5_1:+8402576 | None:intergenic |
| AAGCTTTGGCAACGGGTTAG+GGG | 0.591881 | 5_1:+8409209 | None:intergenic |
| TGAAGAATGTGACCATGTAC+AGG | 0.592562 | 5_1:-8405881 | Msa0715360:intron |
| TTGCACCTGTAGTGTCTGAC+CGG | 0.593939 | 5_1:+8408697 | None:intergenic |
| AGACCTATGTGCAGGACTGG+TGG | 0.595512 | 5_1:-8406222 | Msa0715360:intron |
| TCTGAATCAGATGACAACTC+AGG | 0.597072 | 5_1:+8402365 | None:intergenic |
| GTACCTGTTAAAGCAGGTGT+TGG | 0.597797 | 5_1:+8404506 | None:intergenic |
| CGGCTCTGAAGACGTGCCCG+TGG | 0.597916 | 5_1:+8405172 | None:intergenic |
| AAGATTGATGGAAATGGCAA+GGG | 0.598402 | 5_1:+8402668 | None:intergenic |
| TCCATGAAAATCCACAGCCC+CGG | 0.598824 | 5_1:+8404592 | None:intergenic |
| TGAATCAGCTTGAGGGTCCG+CGG | 0.599441 | 5_1:+8408763 | None:intergenic |
| CTTCGGAAAAGAAGAATTGG+TGG | 0.601565 | 5_1:-8402432 | Msa0715360:CDS |
| TTTGTAGTTGATGACTCTGG+TGG | 0.602609 | 5_1:-8405286 | Msa0715360:CDS |
| ACCCCAATGATTTCTGAGGA+TGG | 0.603403 | 5_1:-8404374 | Msa0715360:CDS |
| TTTATGGAGCCTCGCCCGTG+TGG | 0.604231 | 5_1:-8402099 | Msa0715360:three_prime_UTR |
| TGTCATAAGAATGACATTGG+TGG | 0.605161 | 5_1:-8402172 | Msa0715360:three_prime_UTR |
| AATGGCAAGGGAATAGGCAG+GGG | 0.606801 | 5_1:+8402680 | None:intergenic |
| TTATTACACTTACTTAAGGA+GGG | 0.608043 | 5_1:+8405061 | None:intergenic |
| CAAGAATTATGATCTTAACA+TGG | 0.609519 | 5_1:-8408735 | Msa0715360:CDS |
| CCAACTGGTGCCATTCGGAA+AGG | 0.609799 | 5_1:+8404641 | None:intergenic |
| CTCCTCGTGTAATTCCATAC+CGG | 0.610386 | 5_1:+8402486 | None:intergenic |
| GGGAATGGAATGGACGTCAA+GGG | 0.611756 | 5_1:+8402577 | None:intergenic |
| CAGAGCACAGGCAGTAGCTG+CGG | 0.613610 | 5_1:+8409151 | None:intergenic |
| CAGCATAAACTGCACTTGAG+TGG | 0.614093 | 5_1:+8404687 | None:intergenic |
| GGTGATTATGCAAACTACGT+TGG | 0.614534 | 5_1:-8408972 | Msa0715360:CDS |
| GAAGGACATAAGCTCAGGCT+GGG | 0.614762 | 5_1:-8401974 | Msa0715360:three_prime_UTR |
| GCTGGGGCAGAGTTACTTAG+GGG | 0.615248 | 5_1:-8402461 | Msa0715360:CDS |
| ACAGAACATGCATCTGCAGT+AGG | 0.618779 | 5_1:+8404617 | None:intergenic |
| CCTTCAACCAGCAAATGAAG+AGG | 0.619697 | 5_1:+8401992 | None:intergenic |
| ATACAAATGTTATCAGGGCA+AGG | 0.623983 | 5_1:-8404566 | Msa0715360:CDS |
| AAATGTTATCAGGGCAAGGA+CGG | 0.625782 | 5_1:-8404562 | Msa0715360:CDS |
| GCGTGAGCTCATAGATCCAA+GGG | 0.626550 | 5_1:+8406752 | None:intergenic |
| AGAGCAAAGCACCCGAGTAG+GGG | 0.627680 | 5_1:+8402137 | None:intergenic |
| AAGTGTCATAAGAATGACAT+TGG | 0.628209 | 5_1:-8402175 | Msa0715360:three_prime_UTR |
| GTTGACCCCAATGATTTCTG+AGG | 0.634230 | 5_1:-8404378 | Msa0715360:CDS |
| TACCTGATGCAAGAGCTCCA+TGG | 0.639571 | 5_1:+8404318 | None:intergenic |
| AAATGGCAAGGGAATAGGCA+GGG | 0.640149 | 5_1:+8402679 | None:intergenic |
| CTTCTGTGGAATGTTAGGCA+AGG | 0.644962 | 5_1:+8402072 | None:intergenic |
| TTAATTCATATAGACTTTGG+GGG | 0.645461 | 5_1:+8406013 | None:intergenic |
| AGATGCATGTTCTGTTTCCG+GGG | 0.649613 | 5_1:-8404609 | Msa0715360:CDS |
| CTGCTCTCAATAAACATGAG+AGG | 0.651373 | 5_1:-8407971 | Msa0715360:intron |
| CCACAGAAGCTGGTTCTAGG+TGG | 0.651585 | 5_1:-8402058 | Msa0715360:three_prime_UTR |
| AAAACGAAAATCAACCATGA+GGG | 0.655756 | 5_1:+8402226 | None:intergenic |
| CACCGGTATGGAATTACACG+AGG | 0.661292 | 5_1:-8402488 | Msa0715360:CDS |
| GAAAACGAAAATCAACCATG+AGG | 0.665081 | 5_1:+8402225 | None:intergenic |
| GTCATGCTGTATACTGTCCG+TGG | 0.667231 | 5_1:-8405202 | Msa0715360:CDS |
| CTTGGATCTATGAGCTCACG+CGG | 0.672231 | 5_1:-8406750 | Msa0715360:CDS |
| GTTAGGCAAGGTTAACCACA+CGG | 0.677049 | 5_1:+8402084 | None:intergenic |
| CGAGGCTCCATAAATCAGCA+GGG | 0.679434 | 5_1:+8402108 | None:intergenic |
| ACAGATAGATGGCTGAACAA+CGG | 0.685058 | 5_1:+8402713 | None:intergenic |
| GTGCCCGTGGACCAGAACCA+CGG | 0.686403 | 5_1:+8405185 | None:intergenic |
| TTAGGCAAGGTTAACCACAC+GGG | 0.690891 | 5_1:+8402085 | None:intergenic |
| GAATCAGATGACAACTCAGG+AGG | 0.696881 | 5_1:+8402368 | None:intergenic |
| AATTACACGAGGAGCCGCTG+GGG | 0.699304 | 5_1:-8402477 | Msa0715360:CDS |
| CAACTCAGGAGGACACAATG+TGG | 0.702059 | 5_1:+8402379 | None:intergenic |
| ACGCGGTACACTGTATAAGG+AGG | 0.712382 | 5_1:-8406733 | Msa0715360:CDS |
| CCTAAGTAACTCTGCCCCAG+CGG | 0.713578 | 5_1:+8402463 | None:intergenic |
| ACCATCCTCAGAAATCATTG+GGG | 0.730270 | 5_1:+8404373 | None:intergenic |
| AATATGGTAAATGAGACGAG+TGG | 0.742862 | 5_1:-8406126 | Msa0715360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAGC+AGG | + | chr5_1:8403729-8403748 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | - | chr5_1:8407709-8407728 | Msa0715360:intron | 10.0% |
| !! | AAGAAAAATGTATAAATAAA+GGG | - | chr5_1:8407710-8407729 | Msa0715360:intron | 10.0% |
| !! | TAGATAATTTAATTACAAAG+AGG | - | chr5_1:8401823-8401842 | Msa0715360:three_prime_UTR | 15.0% |
| !!! | AAAAAAACATTTTGAACAAT+TGG | + | chr5_1:8402223-8402242 | None:intergenic | 15.0% |
| !!! | TGTTTGTAATTTTTAATTCA+GGG | - | chr5_1:8403284-8403303 | Msa0715360:intron | 15.0% |
| !!! | ATTTTCTGTTTAAAAGAATA+AGG | + | chr5_1:8403520-8403539 | None:intergenic | 15.0% |
| !! | ATGCTACAAATTTATATATA+TGG | - | chr5_1:8403554-8403573 | Msa0715360:intron | 15.0% |
| !! | GATAAAAATCTTAAATATGT+GGG | + | chr5_1:8404028-8404047 | None:intergenic | 15.0% |
| !! | TGATAAAAATCTTAAATATG+TGG | + | chr5_1:8404029-8404048 | None:intergenic | 15.0% |
| !!! | ATTTTATTTGAGATAAAAAC+TGG | + | chr5_1:8404139-8404158 | None:intergenic | 15.0% |
| !!! | AAATTTTCTCTTTAGATTAT+TGG | - | chr5_1:8404551-8404570 | Msa0715360:CDS | 15.0% |
| !! | AGTATGCATAAAATTAAAAA+TGG | - | chr5_1:8404728-8404747 | Msa0715360:CDS | 15.0% |
| !! | ATTTAATTCATATAGACTTT+GGG | + | chr5_1:8405091-8405110 | None:intergenic | 15.0% |
| !! | ATGCATAGAAATAATTAATT+TGG | + | chr5_1:8405475-8405494 | None:intergenic | 15.0% |
| !! | GTGTGATATTTATATATTAA+TGG | - | chr5_1:8405654-8405673 | Msa0715360:intron | 15.0% |
| !!! | AATTATTTTTTAAAGCCTAA+CGG | + | chr5_1:8405736-8405755 | None:intergenic | 15.0% |
| !!! | CTTTAAAAAATAATTCAGTT+TGG | - | chr5_1:8405741-8405760 | Msa0715360:intron | 15.0% |
| !!! | AACAATCATTCTTTAAAATT+TGG | - | chr5_1:8405778-8405797 | Msa0715360:intron | 15.0% |
| !!! | TATTTTTTTTAATACAGGAT+GGG | + | chr5_1:8407291-8407310 | None:intergenic | 15.0% |
| !!! | TTATTTTTTTTAATACAGGA+TGG | + | chr5_1:8407292-8407311 | None:intergenic | 15.0% |
| !! | GTTAATGTATGTTTAATTAA+AGG | - | chr5_1:8407532-8407551 | Msa0715360:intron | 15.0% |
| !! | TAAAATGCTTAATAATATGA+TGG | - | chr5_1:8407613-8407632 | Msa0715360:intron | 15.0% |
| !! | AAAATGCTTAATAATATGAT+GGG | - | chr5_1:8407614-8407633 | Msa0715360:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | - | chr5_1:8407711-8407730 | Msa0715360:intron | 15.0% |
| !! | TAATTAGAGTTATATTGTAT+TGG | - | chr5_1:8407774-8407793 | Msa0715360:intron | 15.0% |
| !! | AATTAGAGTTATATTGTATT+GGG | - | chr5_1:8407775-8407794 | Msa0715360:intron | 15.0% |
| !!! | TTAAACTTTTCTTTTCGTTA+AGG | + | chr5_1:8401850-8401869 | None:intergenic | 20.0% |
| !! | ATTTCGAAATTTATCATTGA+AGG | + | chr5_1:8402002-8402021 | None:intergenic | 20.0% |
| !!! | GTGTTTTGTTAGTAATTTTA+TGG | + | chr5_1:8403251-8403270 | None:intergenic | 20.0% |
| !!! | GTGTTTGTAATTTTTAATTC+AGG | - | chr5_1:8403283-8403302 | Msa0715360:intron | 20.0% |
| !! | CTACAAATTTATATATATGG+TGG | - | chr5_1:8403557-8403576 | Msa0715360:intron | 20.0% |
| !! | TCATAGTAATAGTATGTAAT+AGG | - | chr5_1:8403656-8403675 | Msa0715360:intron | 20.0% |
| !! | AAAAAAAAAAAGCAGGTAAT+TGG | + | chr5_1:8403722-8403741 | None:intergenic | 20.0% |
| !!! | ATTATTGGCTTTAAGAAAAT+TGG | - | chr5_1:8404566-8404585 | Msa0715360:CDS | 20.0% |
| !! | TTTAATTCATATAGACTTTG+GGG | + | chr5_1:8405090-8405109 | None:intergenic | 20.0% |
| !! | CATTTAATTCATATAGACTT+TGG | + | chr5_1:8405092-8405111 | None:intergenic | 20.0% |
| !! | CAAAGTCTATATGAATTAAA+TGG | - | chr5_1:8405090-8405109 | Msa0715360:CDS | 20.0% |
| !! | TATATGAATTAAATGGAGTT+TGG | - | chr5_1:8405097-8405116 | Msa0715360:CDS | 20.0% |
| !!! | TTTTGATATAGTAGTTGATT+TGG | - | chr5_1:8405257-8405276 | Msa0715360:CDS | 20.0% |
| !!! | TTTGATATAGTAGTTGATTT+GGG | - | chr5_1:8405258-8405277 | Msa0715360:CDS | 20.0% |
| !!! | TTCTGTAAGTTTTCATTTTT+TGG | - | chr5_1:8405360-8405379 | Msa0715360:intron | 20.0% |
| !!! | TTCTTTTTTTCATTTTCTCA+AGG | - | chr5_1:8405393-8405412 | Msa0715360:intron | 20.0% |
| !!! | TCTTTTTTTCATTTTCTCAA+GGG | - | chr5_1:8405394-8405413 | Msa0715360:intron | 20.0% |
| !! | ACAAAGATAAACAAACAAAT+AGG | + | chr5_1:8405626-8405645 | None:intergenic | 20.0% |
| !!! | TTTTAAAGAATGATTGTTCA+AGG | + | chr5_1:8405776-8405795 | None:intergenic | 20.0% |
| !! | AGAATTATTACACTTACTTA+AGG | + | chr5_1:8406045-8406064 | None:intergenic | 20.0% |
| !! | ATTAGAATAGATTACAACAA+AGG | + | chr5_1:8406197-8406216 | None:intergenic | 20.0% |
| !! | TGATAAGATATGTATTTGAT+TGG | - | chr5_1:8406639-8406658 | Msa0715360:intron | 20.0% |
| !! | GATTCAATGATAAGATATTA+TGG | + | chr5_1:8406993-8407012 | None:intergenic | 20.0% |
| !! | AAAGTAAATAGTAGATTCTT+TGG | - | chr5_1:8407066-8407085 | Msa0715360:intron | 20.0% |
| !!! | ATTTTTTTTAATACAGGATG+GGG | + | chr5_1:8407290-8407309 | None:intergenic | 20.0% |
| !!! | GATTTAGATTTAGATTTTAG+AGG | + | chr5_1:8407329-8407348 | None:intergenic | 20.0% |
| !!! | TTTTGACCTAAAATTTTTCT+TGG | - | chr5_1:8407359-8407378 | Msa0715360:intron | 20.0% |
| !!! | TTCATTTCTATTTGTTCTTT+TGG | + | chr5_1:8407465-8407484 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTTTTGACAGAA+GGG | + | chr5_1:8407563-8407582 | None:intergenic | 20.0% |
| !! | TGTCAAAAAAAAGAAAAGAA+AGG | - | chr5_1:8407566-8407585 | Msa0715360:intron | 20.0% |
| !!! | TTTTATGATAGACAACAATT+TGG | + | chr5_1:8407598-8407617 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGAATT+GGG | - | chr5_1:8407734-8407753 | Msa0715360:intron | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr5_1:8407807-8407826 | Msa0715360:intron | 20.0% |
| !!! | GACACTTTTTTTTAGTAAAT+GGG | - | chr5_1:8407844-8407863 | Msa0715360:intron | 20.0% |
| !! | GCAATTAAAGAAAATAGTAT+AGG | - | chr5_1:8407969-8407988 | Msa0715360:intron | 20.0% |
| !!! | AATGATTTGACTTCATTATT+TGG | - | chr5_1:8408205-8408224 | Msa0715360:intron | 20.0% |
| !!! | ATATTGATAATACAATCCAT+TGG | + | chr5_1:8409186-8409205 | None:intergenic | 20.0% |
| ! | GAAATTGTAACAATTCAAGT+TGG | - | chr5_1:8402106-8402125 | Msa0715360:three_prime_UTR | 25.0% |
| ! | TTATTGTGTGTTGAATTGTT+AGG | - | chr5_1:8402295-8402314 | Msa0715360:three_prime_UTR | 25.0% |
| ! | CAAGAATTATGATCTTAACA+TGG | - | chr5_1:8402364-8402383 | Msa0715360:CDS | 25.0% |
| !! | TTTCAAGTACTATTATTTCG+AGG | - | chr5_1:8402448-8402467 | Msa0715360:CDS | 25.0% |
| ! | TGGTTAATGAACTTTAGTTA+AGG | - | chr5_1:8402521-8402540 | Msa0715360:CDS | 25.0% |
| ! | TTAATGAACTTTAGTTAAGG+TGG | - | chr5_1:8402524-8402543 | Msa0715360:CDS | 25.0% |
| !! | AAAGTTTGCTTTAATGAACA+TGG | + | chr5_1:8402914-8402933 | None:intergenic | 25.0% |
| !!! | GTATCTTTTGTTAGTTCTTT+TGG | - | chr5_1:8403160-8403179 | Msa0715360:intron | 25.0% |
| !! | ATAGAGATACACATTTTTGT+TGG | - | chr5_1:8403425-8403444 | Msa0715360:intron | 25.0% |
| !!! | AGGGAAATAAATTTTGAGTA+GGG | + | chr5_1:8403584-8403603 | None:intergenic | 25.0% |
| !! | ATGACTTTTTACCAATACTT+CGG | + | chr5_1:8403640-8403659 | None:intergenic | 25.0% |
| ! | TATTTACTTCAACTCCATAA+AGG | + | chr5_1:8404080-8404099 | None:intergenic | 25.0% |
| ! | AAATACAACATCTTGCATAT+CGG | - | chr5_1:8404095-8404114 | Msa0715360:intron | 25.0% |
| ! | AGTAAAAAGATACGACTAAA+CGG | + | chr5_1:8404775-8404794 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTCTTCTTCATAA+AGG | + | chr5_1:8404954-8404973 | None:intergenic | 25.0% |
| ! | TGAAGAAGAAAACCAAAATA+TGG | - | chr5_1:8404957-8404976 | Msa0715360:intron | 25.0% |
| ! | TTAATTCATATAGACTTTGG+GGG | + | chr5_1:8405089-8405108 | None:intergenic | 25.0% |
| !!! | GATTTTGACAATTATGGAAT+TGG | - | chr5_1:8405132-8405151 | Msa0715360:CDS | 25.0% |
| ! | AAAATTTAGTTACCTGTACA+TGG | + | chr5_1:8405233-8405252 | None:intergenic | 25.0% |
| !!! | TTGATATAGTAGTTGATTTG+GGG | - | chr5_1:8405259-8405278 | Msa0715360:CDS | 25.0% |
| ! | TAAACAAACAAATAGGTTTG+TGG | + | chr5_1:8405619-8405638 | None:intergenic | 25.0% |
| ! | TGATATGCTAACAAAACATA+TGG | - | chr5_1:8405683-8405702 | Msa0715360:intron | 25.0% |
| !!! | ATCATTCTTTAAAATTTGGC+AGG | - | chr5_1:8405782-8405801 | Msa0715360:intron | 25.0% |
| !!! | TCATTCTTTAAAATTTGGCA+GGG | - | chr5_1:8405783-8405802 | Msa0715360:intron | 25.0% |
| ! | AGGTACAATAAGTTTACAAT+AGG | + | chr5_1:8406009-8406028 | None:intergenic | 25.0% |
| ! | TTATTACACTTACTTAAGGA+GGG | + | chr5_1:8406041-8406060 | None:intergenic | 25.0% |
| ! | ATTATTACACTTACTTAAGG+AGG | + | chr5_1:8406042-8406061 | None:intergenic | 25.0% |
| !! | CAATATCCATCTTTGATAAT+AGG | - | chr5_1:8406106-8406125 | Msa0715360:CDS | 25.0% |
| ! | TTAAGATTCTGACACTTAAA+TGG | - | chr5_1:8406145-8406164 | Msa0715360:CDS | 25.0% |
| ! | GATTACAACAAAGGAATTTA+AGG | + | chr5_1:8406188-8406207 | None:intergenic | 25.0% |
| ! | GTATAATTGAATAAGAGAGT+TGG | + | chr5_1:8406288-8406307 | None:intergenic | 25.0% |
| ! | AGAAGAAAAACATCAAAAGA+AGG | + | chr5_1:8406315-8406334 | None:intergenic | 25.0% |
| !! | TTCTTTTGATGTTTTTCTTC+TGG | - | chr5_1:8406314-8406333 | Msa0715360:intron | 25.0% |
| ! | CCTATGAAATTCAATGAAAA+GGG | + | chr5_1:8406350-8406369 | None:intergenic | 25.0% |
| ! | ACCTATGAAATTCAATGAAA+AGG | + | chr5_1:8406351-8406370 | None:intergenic | 25.0% |
| ! | AATGTTTCTCATCTTCAATA+TGG | + | chr5_1:8406391-8406410 | None:intergenic | 25.0% |
| ! | GACTTATACAAATGTTATCA+GGG | - | chr5_1:8406528-8406547 | Msa0715360:intron | 25.0% |
| !! | TGAAAGTTTTCTAACAAACA+CGG | + | chr5_1:8406698-8406717 | None:intergenic | 25.0% |
| !!! | TGTAATGGATATCATTTAGT+GGG | + | chr5_1:8406956-8406975 | None:intergenic | 25.0% |
| !!! | ATGTAATGGATATCATTTAG+TGG | + | chr5_1:8406957-8406976 | None:intergenic | 25.0% |
| ! | TATCCATTACATTGATCAAA+CGG | - | chr5_1:8406965-8406984 | Msa0715360:intron | 25.0% |
| ! | CTTTAAACCATTATGCATAT+TGG | + | chr5_1:8407050-8407069 | None:intergenic | 25.0% |
| ! | ATGGTCAAAACGATATATTT+AGG | - | chr5_1:8407123-8407142 | Msa0715360:intron | 25.0% |
| ! | GATATCTGTAATTCTGTATT+TGG | - | chr5_1:8407145-8407164 | Msa0715360:intron | 25.0% |
| !!! | ATTTAGATTTTAGAGGTAAG+TGG | + | chr5_1:8407322-8407341 | None:intergenic | 25.0% |
| !! | GAAAGACCAAGAAAAATTTT+AGG | + | chr5_1:8407368-8407387 | None:intergenic | 25.0% |
| !!! | CTTTTCTTTTTTTTGACAGA+AGG | + | chr5_1:8407564-8407583 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGAAT+TGG | - | chr5_1:8407733-8407752 | Msa0715360:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGTAAA+TGG | - | chr5_1:8407843-8407862 | Msa0715360:intron | 25.0% |
| ! | TTCTTCAGGCAAATTAAAAT+TGG | + | chr5_1:8408105-8408124 | None:intergenic | 25.0% |
| !!! | AATTTTAATTTGCCTGAAGA+AGG | - | chr5_1:8408104-8408123 | Msa0715360:intron | 25.0% |
| ACGAATTGAACTCAATACTT+TGG | + | chr5_1:8401804-8401823 | None:intergenic | 30.0% | |
| !! | AATTGTTAGGATGAGTTGAT+TGG | - | chr5_1:8402308-8402327 | Msa0715360:three_prime_UTR | 30.0% |
| !! | ATTGTTAGGATGAGTTGATT+GGG | - | chr5_1:8402309-8402328 | Msa0715360:three_prime_UTR | 30.0% |
| ATGTTATTAGAAGTCTCTTG+TGG | - | chr5_1:8402487-8402506 | Msa0715360:CDS | 30.0% | |
| ! | TTTGAGACAAAGATCAAACT+TGG | + | chr5_1:8402565-8402584 | None:intergenic | 30.0% |
| ATGGAATATGATCTTGTATG+TGG | - | chr5_1:8402689-8402708 | Msa0715360:CDS | 30.0% | |
| !! | ACTTGTTATTGCGGAAAATA+TGG | - | chr5_1:8402773-8402792 | Msa0715360:CDS | 30.0% |
| !! | CAACAATGTAAAGGTTTTAG+AGG | + | chr5_1:8402849-8402868 | None:intergenic | 30.0% |
| ACTTTAAGCATCAGTTACTT+AGG | - | chr5_1:8402929-8402948 | Msa0715360:intron | 30.0% | |
| TATCTTTCATAAATGTGTGC+AGG | - | chr5_1:8403082-8403101 | Msa0715360:intron | 30.0% | |
| ATCTTTCATAAATGTGTGCA+GGG | - | chr5_1:8403083-8403102 | Msa0715360:intron | 30.0% | |
| TTACTAACAAAACACACACT+TGG | - | chr5_1:8403256-8403275 | Msa0715360:intron | 30.0% | |
| TATGAGTATCTGATTCTTGA+TGG | + | chr5_1:8403355-8403374 | None:intergenic | 30.0% | |
| !! | GGGAAATAAATTTTGAGTAG+GGG | + | chr5_1:8403583-8403602 | None:intergenic | 30.0% |
| !! | CAGGGAAATAAATTTTGAGT+AGG | + | chr5_1:8403585-8403604 | None:intergenic | 30.0% |
| ACTCAAAATTTATTTCCCTG+AGG | - | chr5_1:8403585-8403604 | Msa0715360:intron | 30.0% | |
| CTCAAAATTTATTTCCCTGA+GGG | - | chr5_1:8403586-8403605 | Msa0715360:intron | 30.0% | |
| ! | TGACTTTTTACCAATACTTC+GGG | + | chr5_1:8403639-8403658 | None:intergenic | 30.0% |
| !! | TGTTAAGTTGATGGGAAAAT+CGG | - | chr5_1:8403783-8403802 | Msa0715360:intron | 30.0% |
| ! | AATAAGTTGTCTTCTGCTTT+TGG | + | chr5_1:8403859-8403878 | None:intergenic | 30.0% |
| AATACAACATCTTGCATATC+GGG | - | chr5_1:8404096-8404115 | Msa0715360:intron | 30.0% | |
| GGAAAAATAGATTACAACGA+GGG | + | chr5_1:8404304-8404323 | None:intergenic | 30.0% | |
| TGGAAAAATAGATTACAACG+AGG | + | chr5_1:8404305-8404324 | None:intergenic | 30.0% | |
| ATAGAGTAGAAAAACTGTAG+AGG | - | chr5_1:8404473-8404492 | Msa0715360:intron | 30.0% | |
| CAATATTGAGACATCGTATA+AGG | - | chr5_1:8404611-8404630 | Msa0715360:CDS | 30.0% | |
| ATCGTATAAGGTTAGTGAAT+AGG | - | chr5_1:8404623-8404642 | Msa0715360:CDS | 30.0% | |
| ACTTCTCTATTACAGTAATC+AGG | + | chr5_1:8404665-8404684 | None:intergenic | 30.0% | |
| ! | TAGTCGTATCTTTTTACTGT+TGG | - | chr5_1:8404777-8404796 | Msa0715360:intron | 30.0% |
| !!! | AGGAACAAGTTTTTTTTCTG+AGG | + | chr5_1:8404925-8404944 | None:intergenic | 30.0% |
| ! | TCGTCTCATTTACCATATTT+TGG | + | chr5_1:8404972-8404991 | None:intergenic | 30.0% |
| ATAACTGAGAGTCTAGAAAA+TGG | - | chr5_1:8405024-8405043 | Msa0715360:intron | 30.0% | |
| ! | TAGAAAATGGAGTTCAGTTT+TGG | - | chr5_1:8405037-8405056 | Msa0715360:intron | 30.0% |
| TTGACAATTATGGAATTGGA+AGG | - | chr5_1:8405136-8405155 | Msa0715360:CDS | 30.0% | |
| TGACAATTATGGAATTGGAA+GGG | - | chr5_1:8405137-8405156 | Msa0715360:CDS | 30.0% | |
| ! | CAAGGCATAAGCATATTTTT+AGG | + | chr5_1:8405421-8405440 | None:intergenic | 30.0% |
| TATGCTTATGCCTTGAATAT+AGG | - | chr5_1:8405426-8405445 | Msa0715360:intron | 30.0% | |
| AGCACTATTACCTATATTCA+AGG | + | chr5_1:8405439-8405458 | None:intergenic | 30.0% | |
| AGAACCTGTTAATTGAAGTA+CGG | - | chr5_1:8405534-8405553 | Msa0715360:intron | 30.0% | |
| CAGTAGCATTTACAGAAATA+CGG | + | chr5_1:8405563-8405582 | None:intergenic | 30.0% | |
| !!! | TTTTAAAGCCTAACGGAAAA+AGG | + | chr5_1:8405729-8405748 | None:intergenic | 30.0% |
| !! | TGAGTTTTTAGAGAACATTG+TGG | - | chr5_1:8405854-8405873 | Msa0715360:intron | 30.0% |
| !!! | GAAGCTCCTCTAAAATTTTA+CGG | + | chr5_1:8405956-8405975 | None:intergenic | 30.0% |
| TGTAAACTTATTGTACCTGT+TGG | - | chr5_1:8406011-8406030 | Msa0715360:CDS | 30.0% | |
| CATCATACTATCAGTTTCAA+TGG | - | chr5_1:8406082-8406101 | Msa0715360:CDS | 30.0% | |
| TGACACTTAAATGGTTACTT+GGG | - | chr5_1:8406154-8406173 | Msa0715360:CDS | 30.0% | |
| ! | CCCTTTTCATTGAATTTCAT+AGG | - | chr5_1:8406347-8406366 | Msa0715360:intron | 30.0% |
| ATCTTCAATATGGAGGAATT+TGG | + | chr5_1:8406381-8406400 | None:intergenic | 30.0% | |
| GGACTTATACAAATGTTATC+AGG | - | chr5_1:8406527-8406546 | Msa0715360:intron | 30.0% | |
| ! | TGGTCTTTTTGTTGAAATTC+AGG | - | chr5_1:8406659-8406678 | Msa0715360:intron | 30.0% |
| ! | TCTTTTTGTTGAAATTCAGG+AGG | - | chr5_1:8406662-8406681 | Msa0715360:intron | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr5_1:8407718-8407737 | Msa0715360:intron | 30.0% | |
| ! | TTGAAATGGCTCAGTTATTT+TGG | - | chr5_1:8407821-8407840 | Msa0715360:intron | 30.0% |
| !! | TGAAATGGCTCAGTTATTTT+GGG | - | chr5_1:8407822-8407841 | Msa0715360:intron | 30.0% |
| !! | TTGTTTCTGAAATACACAAC+AGG | - | chr5_1:8407936-8407955 | Msa0715360:intron | 30.0% |
| TATAAACATTCTGTGAGAGT+GGG | + | chr5_1:8408067-8408086 | None:intergenic | 30.0% | |
| TTATAAACATTCTGTGAGAG+TGG | + | chr5_1:8408068-8408087 | None:intergenic | 30.0% | |
| CACAGAATGTTTATAACCAA+CGG | - | chr5_1:8408072-8408091 | Msa0715360:intron | 30.0% | |
| TAAAATTGGAATCATTCCGT+TGG | + | chr5_1:8408091-8408110 | None:intergenic | 30.0% | |
| AAACAAAACTTGGGAACAAA+CGG | + | chr5_1:8408247-8408266 | None:intergenic | 30.0% | |
| TCATGCAGTAAACAAAACTT+GGG | + | chr5_1:8408256-8408275 | None:intergenic | 30.0% | |
| ATCATGCAGTAAACAAAACT+TGG | + | chr5_1:8408257-8408276 | None:intergenic | 30.0% | |
| TACTGAACAAAAACAGCAAA+GGG | + | chr5_1:8408294-8408313 | None:intergenic | 30.0% | |
| TTTCCAAAGATTGATGGAAA+TGG | + | chr5_1:8408440-8408459 | None:intergenic | 30.0% | |
| TTGATGAAGAATTAGTCAGT+TGG | + | chr5_1:8408496-8408515 | None:intergenic | 30.0% | |
| CTGACTAATTCTTCATCAAA+AGG | - | chr5_1:8408497-8408516 | Msa0715360:intron | 30.0% | |
| TAGAATGCATACATTGTTCT+TGG | - | chr5_1:8408758-8408777 | Msa0715360:CDS | 30.0% | |
| AAAACGAAAATCAACCATGA+GGG | + | chr5_1:8408876-8408895 | None:intergenic | 30.0% | |
| AAGTGTCATAAGAATGACAT+TGG | - | chr5_1:8408924-8408943 | Msa0715360:intron | 30.0% | |
| !!! | TTTTTTTTGTTTCCCCTACT+CGG | - | chr5_1:8408950-8408969 | Msa0715360:CDS | 30.0% |
| !! | GAATTAACTGTTGTTTCCAA+TGG | - | chr5_1:8409167-8409186 | Msa0715360:five_prime_UTR | 30.0% |
| CAATATCAATGACAATGTGT+TGG | - | chr5_1:8409200-8409219 | Msa0715360:five_prime_UTR | 30.0% | |
| !!! | AAAAGTCCTTGGTGTTTTTT+TGG | - | chr5_1:8409240-8409259 | Msa0715360:five_prime_UTR | 30.0% |
| !!! | AAAGTCCTTGGTGTTTTTTT+GGG | - | chr5_1:8409241-8409260 | Msa0715360:five_prime_UTR | 30.0% |
| ! | TCTTTCTTTTACTGCAAAAC+CGG | + | chr5_1:8409275-8409294 | None:intergenic | 30.0% |
| CAACTTCTTTGCTTAGTCTA+AGG | - | chr5_1:8401974-8401993 | Msa0715360:three_prime_UTR | 35.0% | |
| TAAAGTTCATTAACCACTCG+AGG | + | chr5_1:8402517-8402536 | None:intergenic | 35.0% | |
| TTAGTTAAGGTGGAACTATC+AGG | - | chr5_1:8402534-8402553 | Msa0715360:CDS | 35.0% | |
| CTTAAACCTCCTGTTCATAT+GGG | + | chr5_1:8402642-8402661 | None:intergenic | 35.0% | |
| ! | AGGCCAAAAGAAAAGTCTTT+TGG | - | chr5_1:8402660-8402679 | Msa0715360:CDS | 35.0% |
| ! | GCACCAAAAGACTTTTCTTT+TGG | + | chr5_1:8402666-8402685 | None:intergenic | 35.0% |
| !! | AAAAGTCTTTTGGTGCAAGA+TGG | - | chr5_1:8402670-8402689 | Msa0715360:CDS | 35.0% |
| !! | TTGCTTATGGTTCTAGATTG+AGG | - | chr5_1:8402733-8402752 | Msa0715360:CDS | 35.0% |
| GATCTGCATCAACAATGTAA+AGG | + | chr5_1:8402858-8402877 | None:intergenic | 35.0% | |
| GAATGTAATACTATCCCTCA+GGG | + | chr5_1:8403603-8403622 | None:intergenic | 35.0% | |
| AGAATGTAATACTATCCCTC+AGG | + | chr5_1:8403604-8403623 | None:intergenic | 35.0% | |
| TTGTGGAGATAGAAATCAGA+TGG | - | chr5_1:8403757-8403776 | Msa0715360:intron | 35.0% | |
| TGTGGAGATAGAAATCAGAT+GGG | - | chr5_1:8403758-8403777 | Msa0715360:intron | 35.0% | |
| !! | AGATGGGTTTGTTAAGTTGA+TGG | - | chr5_1:8403774-8403793 | Msa0715360:intron | 35.0% |
| !! | GATGGGTTTGTTAAGTTGAT+GGG | - | chr5_1:8403775-8403794 | Msa0715360:intron | 35.0% |
| TCGGAAACAATCTAAACAAG+AGG | - | chr5_1:8403802-8403821 | Msa0715360:intron | 35.0% | |
| AACAATCTAAACAAGAGGAC+TGG | - | chr5_1:8403807-8403826 | Msa0715360:intron | 35.0% | |
| CAACTCCATAAAGGTAGAAA+AGG | + | chr5_1:8404071-8404090 | None:intergenic | 35.0% | |
| ATAAAAACTGGCATCCGAAA+AGG | + | chr5_1:8404127-8404146 | None:intergenic | 35.0% | |
| CAGAACAAATGGAAATTGCA+AGG | + | chr5_1:8404162-8404181 | None:intergenic | 35.0% | |
| ATTCGCACTTGAAAGGAAAA+CGG | + | chr5_1:8404263-8404282 | None:intergenic | 35.0% | |
| AAATAGATTACAACGAGGGA+AGG | + | chr5_1:8404300-8404319 | None:intergenic | 35.0% | |
| CCTGAAAAGGTTAACAGATT+TGG | + | chr5_1:8404325-8404344 | None:intergenic | 35.0% | |
| ! | CCAAATCTGTTAACCTTTTC+AGG | - | chr5_1:8404322-8404341 | Msa0715360:CDS | 35.0% |
| AGAAAAACTGTAGAGGATTG+AGG | - | chr5_1:8404480-8404499 | Msa0715360:intron | 35.0% | |
| !!! | GTTTTTTTTCTGAGGTTCAG+AGG | + | chr5_1:8404917-8404936 | None:intergenic | 35.0% |
| ! | CTTCTTCATAAAGGCTTTGT+AGG | + | chr5_1:8404945-8404964 | None:intergenic | 35.0% |
| AATATGGTAAATGAGACGAG+TGG | - | chr5_1:8404973-8404992 | Msa0715360:intron | 35.0% | |
| !! | GTTGGCGATTTTGACAATTA+TGG | - | chr5_1:8405126-8405145 | Msa0715360:CDS | 35.0% |
| AAGGGGAAGAAATTAGTGAT+AGG | - | chr5_1:8405181-8405200 | Msa0715360:CDS | 35.0% | |
| TGTTTCATTACAAGAGTGAC+AGG | + | chr5_1:8405306-8405325 | None:intergenic | 35.0% | |
| ! | GTGCAATATCTTAAAGCATC+TGG | - | chr5_1:8405334-8405353 | Msa0715360:intron | 35.0% |
| GATACCGTACTTCAATTAAC+AGG | + | chr5_1:8405541-8405560 | None:intergenic | 35.0% | |
| AATGCTACTGTAAACTGACA+TGG | - | chr5_1:8405573-8405592 | Msa0715360:intron | 35.0% | |
| !! | CAATTTGTAGTTGATGACTC+TGG | - | chr5_1:8405810-8405829 | Msa0715360:intron | 35.0% |
| !!! | CCTCTAAAATTTTACGGTTC+CGG | + | chr5_1:8405950-8405969 | None:intergenic | 35.0% |
| TTGCAGCCTATTATCAAAGA+TGG | + | chr5_1:8406115-8406134 | None:intergenic | 35.0% | |
| CTGACACTTAAATGGTTACT+TGG | - | chr5_1:8406153-8406172 | Msa0715360:CDS | 35.0% | |
| AAATGGTTACTTGGGATTGA+TGG | - | chr5_1:8406162-8406181 | Msa0715360:CDS | 35.0% | |
| GATGCCAAATGTATTGTTGT+TGG | - | chr5_1:8406237-8406256 | Msa0715360:intron | 35.0% | |
| TGAGCCAACAACAATACATT+TGG | + | chr5_1:8406244-8406263 | None:intergenic | 35.0% | |
| GTTTCTCATCTTCAATATGG+AGG | + | chr5_1:8406388-8406407 | None:intergenic | 35.0% | |
| ATACAAATGTTATCAGGGCA+AGG | - | chr5_1:8406533-8406552 | Msa0715360:intron | 35.0% | |
| TCAAATGTACCTGTTAAAGC+AGG | + | chr5_1:8406602-8406621 | None:intergenic | 35.0% | |
| GTTTAGAAAGACAAGACAAG+AGG | + | chr5_1:8406859-8406878 | None:intergenic | 35.0% | |
| TGGTGTGCTTATTAGATACA+GGG | + | chr5_1:8406912-8406931 | None:intergenic | 35.0% | |
| TTGGTGTGCTTATTAGATAC+AGG | + | chr5_1:8406913-8406932 | None:intergenic | 35.0% | |
| TAGTGGGAAAATGCTTTGAT+CGG | + | chr5_1:8406940-8406959 | None:intergenic | 35.0% | |
| CCATTATGCATATTGGATAC+AGG | + | chr5_1:8407043-8407062 | None:intergenic | 35.0% | |
| CCTGTATCCAATATGCATAA+TGG | - | chr5_1:8407040-8407059 | Msa0715360:intron | 35.0% | |
| !! | GTTTTGACCATGATCTTACT+CGG | + | chr5_1:8407114-8407133 | None:intergenic | 35.0% |
| TACAAATGTACCAGTTAGTG+GGG | + | chr5_1:8407429-8407448 | None:intergenic | 35.0% | |
| CTACAAATGTACCAGTTAGT+GGG | + | chr5_1:8407430-8407449 | None:intergenic | 35.0% | |
| TCTACAAATGTACCAGTTAG+TGG | + | chr5_1:8407431-8407450 | None:intergenic | 35.0% | |
| ATCTGTGTGAAAAACCAAAC+TGG | + | chr5_1:8407689-8407708 | None:intergenic | 35.0% | |
| AGTAAATGGGTCAGATATTC+CGG | - | chr5_1:8407857-8407876 | Msa0715360:intron | 35.0% | |
| AATATTCAGTCCTGTATGAC+AGG | - | chr5_1:8407901-8407920 | Msa0715360:intron | 35.0% | |
| ATATTCAGTCCTGTATGACA+GGG | - | chr5_1:8407902-8407921 | Msa0715360:intron | 35.0% | |
| ! | TCTGAAATACACAACAGGAA+AGG | - | chr5_1:8407941-8407960 | Msa0715360:intron | 35.0% |
| ATAAACATTCTGTGAGAGTG+GGG | + | chr5_1:8408066-8408085 | None:intergenic | 35.0% | |
| ACTGAACAAAAACAGCAAAG+GGG | + | chr5_1:8408293-8408312 | None:intergenic | 35.0% | |
| CTACTGAACAAAAACAGCAA+AGG | + | chr5_1:8408295-8408314 | None:intergenic | 35.0% | |
| !!! | TGCTGTTTTTGTTCAGTAGA+AGG | - | chr5_1:8408296-8408315 | Msa0715360:intron | 35.0% |
| AAGATTGATGGAAATGGCAA+GGG | + | chr5_1:8408434-8408453 | None:intergenic | 35.0% | |
| AAAGATTGATGGAAATGGCA+AGG | + | chr5_1:8408435-8408454 | None:intergenic | 35.0% | |
| ! | TTGCCATTTCCATCAATCTT+TGG | - | chr5_1:8408434-8408453 | Msa0715360:intron | 35.0% |
| ATAACCTGCAAAATCTTCAC+CGG | - | chr5_1:8408594-8408613 | Msa0715360:intron | 35.0% | |
| GTTCCAAAAACAAGAAGTGA+GGG | - | chr5_1:8408780-8408799 | Msa0715360:CDS | 35.0% | |
| ACAAATTTGACCAATGCTTC+AGG | - | chr5_1:8408826-8408845 | Msa0715360:intron | 35.0% | |
| CAAATTTGACCAATGCTTCA+GGG | - | chr5_1:8408827-8408846 | Msa0715360:intron | 35.0% | |
| GAAAACGAAAATCAACCATG+AGG | + | chr5_1:8408877-8408896 | None:intergenic | 35.0% | |
| TGTCATAAGAATGACATTGG+TGG | - | chr5_1:8408927-8408946 | Msa0715360:intron | 35.0% | |
| !!! | TTTTTTTGTTTCCCCTACTC+GGG | - | chr5_1:8408951-8408970 | Msa0715360:CDS | 35.0% |
| !!! | CTCGTATAAGTTTTGTTGAG+AGG | + | chr5_1:8409087-8409106 | None:intergenic | 35.0% |
| !! | GTTTTCAAGAGAAAAGTCCT+TGG | - | chr5_1:8409229-8409248 | Msa0715360:five_prime_UTR | 35.0% |
| ! | CTTTCTTTTACTGCAAAACC+GGG | + | chr5_1:8409274-8409293 | None:intergenic | 35.0% |
| GGTGATTATGCAAACTACGT+TGG | - | chr5_1:8402127-8402146 | Msa0715360:three_prime_UTR | 40.0% | |
| !! | TTAGGATGAGTTGATTGGGT+TGG | - | chr5_1:8402313-8402332 | Msa0715360:three_prime_UTR | 40.0% |
| TGAACACTGAATCAGCTTGA+GGG | + | chr5_1:8402346-8402365 | None:intergenic | 40.0% | |
| TTGAACACTGAATCAGCTTG+AGG | + | chr5_1:8402347-8402366 | None:intergenic | 40.0% | |
| ATGGATGTGCTTTATCGTAC+CGG | - | chr5_1:8402383-8402402 | Msa0715360:CDS | 40.0% | |
| TCCTGTTCATATGGGATAGT+GGG | + | chr5_1:8402634-8402653 | None:intergenic | 40.0% | |
| CCTTAAACCTCCTGTTCATA+TGG | + | chr5_1:8402643-8402662 | None:intergenic | 40.0% | |
| CCATATGAACAGGAGGTTTA+AGG | - | chr5_1:8402640-8402659 | Msa0715360:CDS | 40.0% | |
| AACAGACCAACTAGATAAGG+AGG | + | chr5_1:8402715-8402734 | None:intergenic | 40.0% | |
| AGCAACAGACCAACTAGATA+AGG | + | chr5_1:8402718-8402737 | None:intergenic | 40.0% | |
| ! | TCTAGTTGGTCTGTTGCTTA+TGG | - | chr5_1:8402720-8402739 | Msa0715360:CDS | 40.0% |
| !! | GCGCATTGAACTTGTTATTG+CGG | - | chr5_1:8402764-8402783 | Msa0715360:CDS | 40.0% |
| ATGAACATGGACATGACACA+TGG | + | chr5_1:8402901-8402920 | None:intergenic | 40.0% | |
| CTCTCATGTTTATTGAGAGC+AGG | + | chr5_1:8403130-8403149 | None:intergenic | 40.0% | |
| CTGCTCTCAATAAACATGAG+AGG | - | chr5_1:8403128-8403147 | Msa0715360:intron | 40.0% | |
| AATACTTCGGGTGTTAGTTC+AGG | + | chr5_1:8403627-8403646 | None:intergenic | 40.0% | |
| TGAACTAACACCCGAAGTAT+TGG | - | chr5_1:8403626-8403645 | Msa0715360:intron | 40.0% | |
| TGTAATAGGACCTATTTCGC+TGG | - | chr5_1:8403670-8403689 | Msa0715360:intron | 40.0% | |
| AACCTTTGAACCAGCGAAAT+AGG | + | chr5_1:8403683-8403702 | None:intergenic | 40.0% | |
| TCATGTCAAAAGCAAACGTC+AGG | + | chr5_1:8404003-8404022 | None:intergenic | 40.0% | |
| ! | GCTTGCCTTTTCTACCTTTA+TGG | - | chr5_1:8404063-8404082 | Msa0715360:intron | 40.0% |
| TCAGCAGAAGACAGAACAAA+TGG | + | chr5_1:8404173-8404192 | None:intergenic | 40.0% | |
| GAGTGATATTCGCACTTGAA+AGG | + | chr5_1:8404270-8404289 | None:intergenic | 40.0% | |
| !! | TTAACCTTTTCAGGATCCCT+TGG | - | chr5_1:8404331-8404350 | Msa0715360:CDS | 40.0% |
| TGTGAAAACGTCTGATGTTG+CGG | + | chr5_1:8404398-8404417 | None:intergenic | 40.0% | |
| ! | CAACATCAGACGTTTTCACA+TGG | - | chr5_1:8404398-8404417 | Msa0715360:CDS | 40.0% |
| AAACTGTAGAGGATTGAGGA+AGG | - | chr5_1:8404484-8404503 | Msa0715360:intron | 40.0% | |
| CTCTAACGTTGACATTCTTG+TGG | - | chr5_1:8404509-8404528 | Msa0715360:intron | 40.0% | |
| AGAGACTATGAAGACATAGC+TGG | + | chr5_1:8404820-8404839 | None:intergenic | 40.0% | |
| GCTATGTCTTCATAGTCTCT+TGG | - | chr5_1:8404820-8404839 | Msa0715360:intron | 40.0% | |
| TCTCAGTTATATCCCTATCC+TGG | + | chr5_1:8405014-8405033 | None:intergenic | 40.0% | |
| ! | ATTCATATAGACTTTGGGGG+TGG | + | chr5_1:8405086-8405105 | None:intergenic | 40.0% |
| AATGGAGTTTGGACAGATGT+TGG | - | chr5_1:8405108-8405127 | Msa0715360:CDS | 40.0% | |
| ! | TTGGAAGGGATTCTTTTGCA+TGG | - | chr5_1:8405151-8405170 | Msa0715360:CDS | 40.0% |
| ! | TGGAAGGGATTCTTTTGCAT+GGG | - | chr5_1:8405152-8405171 | Msa0715360:CDS | 40.0% |
| TGAAGAATGTGACCATGTAC+AGG | - | chr5_1:8405218-8405237 | Msa0715360:CDS | 40.0% | |
| !! | TTTGTAGTTGATGACTCTGG+TGG | - | chr5_1:8405813-8405832 | Msa0715360:intron | 40.0% |
| ! | CTCTAAAAACTCAGAAGCCA+CGG | + | chr5_1:8405847-8405866 | None:intergenic | 40.0% |
| ! | CCGGAACCGTAAAATTTTAG+AGG | - | chr5_1:8405947-8405966 | Msa0715360:CDS | 40.0% |
| CATTCGGAAAGGAAGACTAA+TGG | + | chr5_1:8406450-8406469 | None:intergenic | 40.0% | |
| !! | CATTAGTCTTCCTTTCCGAA+TGG | - | chr5_1:8406448-8406467 | Msa0715360:intron | 40.0% |
| AAATGTTATCAGGGCAAGGA+CGG | - | chr5_1:8406537-8406556 | Msa0715360:intron | 40.0% | |
| ! | GCAGAATATGGTGTCAATTC+TGG | - | chr5_1:8406559-8406578 | Msa0715360:intron | 40.0% |
| TCAGAAATCATTGGGGTCAA+CGG | + | chr5_1:8406722-8406741 | None:intergenic | 40.0% | |
| ACCATCCTCAGAAATCATTG+GGG | + | chr5_1:8406729-8406748 | None:intergenic | 40.0% | |
| CACCATCCTCAGAAATCATT+GGG | + | chr5_1:8406730-8406749 | None:intergenic | 40.0% | |
| TCACCATCCTCAGAAATCAT+TGG | + | chr5_1:8406731-8406750 | None:intergenic | 40.0% | |
| ATTGAACACTTGACAGTCCA+TGG | - | chr5_1:8406764-8406783 | Msa0715360:intron | 40.0% | |
| GACAAGACAAGAGGATACAA+GGG | + | chr5_1:8406850-8406869 | None:intergenic | 40.0% | |
| AGACAAGACAAGAGGATACA+AGG | + | chr5_1:8406851-8406870 | None:intergenic | 40.0% | |
| AGGGTAAGATCATTGAAGTG+GGG | + | chr5_1:8406893-8406912 | None:intergenic | 40.0% | |
| CAGGGTAAGATCATTGAAGT+GGG | + | chr5_1:8406894-8406913 | None:intergenic | 40.0% | |
| ACAGGGTAAGATCATTGAAG+TGG | + | chr5_1:8406895-8406914 | None:intergenic | 40.0% | |
| AAATGCTTTGATCGGTTGGT+TGG | + | chr5_1:8406932-8406951 | None:intergenic | 40.0% | |
| !! | GTGCCGTTTGATCAATGTAA+TGG | + | chr5_1:8406971-8406990 | None:intergenic | 40.0% |
| TACTGTTCCGAGTAAGATCA+TGG | - | chr5_1:8407104-8407123 | Msa0715360:intron | 40.0% | |
| CAACCATGTCTTATCTCACT+AGG | - | chr5_1:8407230-8407249 | Msa0715360:intron | 40.0% | |
| TCACCTAGTGAGATAAGACA+TGG | + | chr5_1:8407236-8407255 | None:intergenic | 40.0% | |
| CTTATCTCACTAGGTGAGTT+CGG | - | chr5_1:8407239-8407258 | Msa0715360:intron | 40.0% | |
| ! | GTACATTTTACCTCACTGTC+TGG | + | chr5_1:8407642-8407661 | None:intergenic | 40.0% |
| GTAAATGGGTCAGATATTCC+GGG | - | chr5_1:8407858-8407877 | Msa0715360:intron | 40.0% | |
| ! | GGAGTTAATTTGGACTTCCA+GGG | + | chr5_1:8408025-8408044 | None:intergenic | 40.0% |
| ! | TGGAGTTAATTTGGACTTCC+AGG | + | chr5_1:8408026-8408045 | None:intergenic | 40.0% |
| ! | AGGGTAGGTTGGAGTTAATT+TGG | + | chr5_1:8408035-8408054 | None:intergenic | 40.0% |
| TAAACATTCTGTGAGAGTGG+GGG | + | chr5_1:8408065-8408084 | None:intergenic | 40.0% | |
| ACAAGTTTAGCACCTTCTTC+AGG | + | chr5_1:8408119-8408138 | None:intergenic | 40.0% | |
| CACTTCACACATTCAAGCTT+GGG | + | chr5_1:8408168-8408187 | None:intergenic | 40.0% | |
| ! | TTTTGTTCAGTAGAAGGTCG+TGG | - | chr5_1:8408302-8408321 | Msa0715360:intron | 40.0% |
| ACAGATAGATGGCTGAACAA+CGG | + | chr5_1:8408389-8408408 | None:intergenic | 40.0% | |
| ! | TCCATCAATCTTTGGAAACC+AGG | - | chr5_1:8408442-8408461 | Msa0715360:intron | 40.0% |
| ACCTGGTTTCCAAAGATTGA+TGG | + | chr5_1:8408446-8408465 | None:intergenic | 40.0% | |
| ! | TCAATCTTTGGAAACCAGGT+TGG | - | chr5_1:8408446-8408465 | Msa0715360:intron | 40.0% |
| TGCAGGTTATACTCCAAAAG+TGG | + | chr5_1:8408584-8408603 | None:intergenic | 40.0% | |
| CTTCGGAAAAGAAGAATTGG+TGG | - | chr5_1:8408667-8408686 | Msa0715360:intron | 40.0% | |
| AGAAGAATTGGTGGAAATGC+AGG | - | chr5_1:8408676-8408695 | Msa0715360:intron | 40.0% | |
| GCAGGAGATGTTGTCTAAAA+TGG | - | chr5_1:8408694-8408713 | Msa0715360:intron | 40.0% | |
| TCTGAATCAGATGACAACTC+AGG | + | chr5_1:8408737-8408756 | None:intergenic | 40.0% | |
| GGTTCCAAAAACAAGAAGTG+AGG | - | chr5_1:8408779-8408798 | Msa0715360:CDS | 40.0% | |
| !!! | GTTCCCTCACTTCTTGTTTT+TGG | + | chr5_1:8408786-8408805 | None:intergenic | 40.0% |
| GAAGTGAGGGAACATTTGTA+AGG | - | chr5_1:8408793-8408812 | Msa0715360:intron | 40.0% | |
| AGAGACCCAAAAAAACACCA+AGG | + | chr5_1:8409249-8409268 | None:intergenic | 40.0% | |
| !! | CTCTCACTTCTGGAACTTTC+AGG | - | chr5_1:8402150-8402169 | Msa0715360:three_prime_UTR | 45.0% |
| ATTTCCGAGACGAACTCCAT+AGG | - | chr5_1:8402608-8402627 | Msa0715360:CDS | 45.0% | |
| CTCCTGTTCATATGGGATAG+TGG | + | chr5_1:8402635-8402654 | None:intergenic | 45.0% | |
| CACTATCCCATATGAACAGG+AGG | - | chr5_1:8402633-8402652 | Msa0715360:CDS | 45.0% | |
| ATGTGGCCTCCTTATCTAGT+TGG | - | chr5_1:8402706-8402725 | Msa0715360:CDS | 45.0% | |
| !!! | GGTTTTAGAGGTCTCCACAA+CGG | + | chr5_1:8402837-8402856 | None:intergenic | 45.0% |
| ATGTTTATTGAGAGCAGGCG+AGG | + | chr5_1:8403125-8403144 | None:intergenic | 45.0% | |
| !! | GACCTATTTCGCTGGTTCAA+AGG | - | chr5_1:8403678-8403697 | Msa0715360:intron | 45.0% |
| ! | CATATCGGGTGTCTCCTTTT+CGG | - | chr5_1:8404110-8404129 | Msa0715360:intron | 45.0% |
| AGATCCAAGGGATCCTGAAA+AGG | + | chr5_1:8404338-8404357 | None:intergenic | 45.0% | |
| GTGAAAACGTCTGATGTTGC+GGG | + | chr5_1:8404397-8404416 | None:intergenic | 45.0% | |
| ! | GACTAAACGGATTCTGCAAG+TGG | + | chr5_1:8404762-8404781 | None:intergenic | 45.0% |
| GAAGACATAGCTGGTGAAGT+AGG | + | chr5_1:8404811-8404830 | None:intergenic | 45.0% | |
| ATGTCCATAGACCTATGTGC+AGG | - | chr5_1:8404869-8404888 | Msa0715360:intron | 45.0% | |
| !! | TTTCTGAGGTTCAGAGGCTT+GGG | + | chr5_1:8404911-8404930 | None:intergenic | 45.0% |
| !!! | TTTTCTGAGGTTCAGAGGCT+TGG | + | chr5_1:8404912-8404931 | None:intergenic | 45.0% |
| ! | TCTTTTGCATGGGCTTCACA+AGG | - | chr5_1:8405162-8405181 | Msa0715360:CDS | 45.0% |
| ! | CTTTTGCATGGGCTTCACAA+GGG | - | chr5_1:8405163-8405182 | Msa0715360:CDS | 45.0% |
| ! | TTTTGCATGGGCTTCACAAG+GGG | - | chr5_1:8405164-8405183 | Msa0715360:CDS | 45.0% |
| ! | AGCCATAGCCTTTTTCCGTT+AGG | - | chr5_1:8405718-8405737 | Msa0715360:intron | 45.0% |
| AGCCTAACGGAAAAAGGCTA+TGG | + | chr5_1:8405723-8405742 | None:intergenic | 45.0% | |
| TAAAAACTCAGAAGCCACGG+AGG | + | chr5_1:8405844-8405863 | None:intergenic | 45.0% | |
| TACACTTACTTAAGGAGGGC+AGG | + | chr5_1:8406037-8406056 | None:intergenic | 45.0% | |
| CAGCATAAACTGCACTTGAG+TGG | + | chr5_1:8406415-8406434 | None:intergenic | 45.0% | |
| ACAGAACATGCATCTGCAGT+AGG | + | chr5_1:8406485-8406504 | None:intergenic | 45.0% | |
| GCAGATGCATGTTCTGTTTC+CGG | - | chr5_1:8406488-8406507 | Msa0715360:intron | 45.0% | |
| CAGATGCATGTTCTGTTTCC+GGG | - | chr5_1:8406489-8406508 | Msa0715360:intron | 45.0% | |
| AGATGCATGTTCTGTTTCCG+GGG | - | chr5_1:8406490-8406509 | Msa0715360:intron | 45.0% | |
| !! | TGTTAAAGCAGGTGTTGGCA+TGG | + | chr5_1:8406591-8406610 | None:intergenic | 45.0% |
| ATGCCAACACCTGCTTTAAC+AGG | - | chr5_1:8406590-8406609 | Msa0715360:intron | 45.0% | |
| GTACCTGTTAAAGCAGGTGT+TGG | + | chr5_1:8406596-8406615 | None:intergenic | 45.0% | |
| GTTGACCCCAATGATTTCTG+AGG | - | chr5_1:8406721-8406740 | Msa0715360:CDS | 45.0% | |
| ! | ACCCCAATGATTTCTGAGGA+TGG | - | chr5_1:8406725-8406744 | Msa0715360:CDS | 45.0% |
| TGAGGATGGTGAAGACTTAC+AGG | - | chr5_1:8406739-8406758 | Msa0715360:CDS | 45.0% | |
| GGGAAAATGCTTTGATCGGT+TGG | + | chr5_1:8406936-8406955 | None:intergenic | 45.0% | |
| TAGTGGGGTTGACAAGATGA+AGG | + | chr5_1:8407414-8407433 | None:intergenic | 45.0% | |
| ATCTTGTCAACCCCACTAAC+TGG | - | chr5_1:8407416-8407435 | Msa0715360:intron | 45.0% | |
| ! | CAAACTGGCTCAGATATTCC+GGG | + | chr5_1:8407674-8407693 | None:intergenic | 45.0% |
| ! | CCAAACTGGCTCAGATATTC+CGG | + | chr5_1:8407675-8407694 | None:intergenic | 45.0% |
| ATTTGGACTTCCAGGGAGTA+GGG | + | chr5_1:8408018-8408037 | None:intergenic | 45.0% | |
| AATTTGGACTTCCAGGGAGT+AGG | + | chr5_1:8408019-8408038 | None:intergenic | 45.0% | |
| CCACTTCACACATTCAAGCT+TGG | + | chr5_1:8408169-8408188 | None:intergenic | 45.0% | |
| CCAAGCTTGAATGTGTGAAG+TGG | - | chr5_1:8408166-8408185 | Msa0715360:intron | 45.0% | |
| GAATGTGTGAAGTGGTCTGT+TGG | - | chr5_1:8408174-8408193 | Msa0715360:intron | 45.0% | |
| ! | CTTATCAACGTGCCGATACA+AGG | - | chr5_1:8408363-8408382 | Msa0715360:intron | 45.0% |
| GACAACGAGCAACAGATAGA+TGG | + | chr5_1:8408400-8408419 | None:intergenic | 45.0% | |
| AAATGGCAAGGGAATAGGCA+GGG | + | chr5_1:8408423-8408442 | None:intergenic | 45.0% | |
| GATGGAAATGGCAAGGGAAT+AGG | + | chr5_1:8408428-8408447 | None:intergenic | 45.0% | |
| ! | CATACCGGTGAAGATTTTGC+AGG | + | chr5_1:8408601-8408620 | None:intergenic | 45.0% |
| CTGCAAAATCTTCACCGGTA+TGG | - | chr5_1:8408599-8408618 | Msa0715360:intron | 45.0% | |
| CTCCTCGTGTAATTCCATAC+CGG | + | chr5_1:8408616-8408635 | None:intergenic | 45.0% | |
| GGGCTTCGGAAAAGAAGAAT+TGG | - | chr5_1:8408664-8408683 | Msa0715360:intron | 45.0% | |
| GAATCAGATGACAACTCAGG+AGG | + | chr5_1:8408734-8408753 | None:intergenic | 45.0% | |
| CAACAAGAACCCTGAAGCAT+TGG | + | chr5_1:8408839-8408858 | None:intergenic | 45.0% | |
| GAAAATCAACCATGAGGGTG+GGG | + | chr5_1:8408871-8408890 | None:intergenic | 45.0% | |
| CGAAAATCAACCATGAGGGT+GGG | + | chr5_1:8408872-8408891 | None:intergenic | 45.0% | |
| ACGAAAATCAACCATGAGGG+TGG | + | chr5_1:8408873-8408892 | None:intergenic | 45.0% | |
| !! | TGTGACTCCCTGCTGATTTA+TGG | - | chr5_1:8408984-8409003 | Msa0715360:CDS | 45.0% |
| TTAGGCAAGGTTAACCACAC+GGG | + | chr5_1:8409017-8409036 | None:intergenic | 45.0% | |
| GTTAGGCAAGGTTAACCACA+CGG | + | chr5_1:8409018-8409037 | None:intergenic | 45.0% | |
| CTTCTGTGGAATGTTAGGCA+AGG | + | chr5_1:8409030-8409049 | None:intergenic | 45.0% | |
| ACCAGCTTCTGTGGAATGTT+AGG | + | chr5_1:8409035-8409054 | None:intergenic | 45.0% | |
| ! | ATTCCACAGAAGCTGGTTCT+AGG | - | chr5_1:8409038-8409057 | Msa0715360:intron | 45.0% |
| ATACGAGCCTCTTCATTTGC+TGG | - | chr5_1:8409100-8409119 | Msa0715360:intron | 45.0% | |
| CCTTCAACCAGCAAATGAAG+AGG | + | chr5_1:8409110-8409129 | None:intergenic | 45.0% | |
| ! | CCTCTTCATTTGCTGGTTGA+AGG | - | chr5_1:8409107-8409126 | Msa0715360:intron | 45.0% |
| TGGTTGAAGGACATAAGCTC+AGG | - | chr5_1:8409120-8409139 | Msa0715360:intron | 45.0% | |
| !!! | GTTTTTTTGGGTCTCTGACC+CGG | - | chr5_1:8409253-8409272 | Msa0715360:five_prime_UTR | 45.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+TGG | - | chr5_1:8403740-8403759 | Msa0715360:intron | 5.0% |
| !!! | CTATTTATTTATTTTTTTTA+CGG | + | chr5_1:8403941-8403960 | None:intergenic | 5.0% |
| !!! | ATTTTTATTTTTTTTAATAC+AGG | + | chr5_1:8407296-8407315 | None:intergenic | 5.0% |
| !! | AAGCTTTGGCAACGGGTTAG+GGG | + | chr5_1:8401893-8401912 | None:intergenic | 50.0% |
| !! | GAAGCTTTGGCAACGGGTTA+GGG | + | chr5_1:8401894-8401913 | None:intergenic | 50.0% |
| ! | AGAAGCTTTGGCAACGGGTT+AGG | + | chr5_1:8401895-8401914 | None:intergenic | 50.0% |
| AACCCGTTGCCAAAGCTTCT+CGG | - | chr5_1:8401895-8401914 | Msa0715360:three_prime_UTR | 50.0% | |
| AAGAAGTTGTCGCAGAGCAC+AGG | + | chr5_1:8401963-8401982 | None:intergenic | 50.0% | |
| !! | ACTACGTTGGCTCTCACTTC+TGG | - | chr5_1:8402140-8402159 | Msa0715360:three_prime_UTR | 50.0% |
| TTGCACCTGTAGTGTCTGAC+CGG | + | chr5_1:8402405-8402424 | None:intergenic | 50.0% | |
| !! | CATATGGGATAGTGGGCCTA+TGG | + | chr5_1:8402627-8402646 | None:intergenic | 50.0% |
| GCCCACTATCCCATATGAAC+AGG | - | chr5_1:8402630-8402649 | Msa0715360:CDS | 50.0% | |
| AGTCGATACACCCACAATCG+AGG | - | chr5_1:8402804-8402823 | Msa0715360:intron | 50.0% | |
| TACAACGAGGGAAGGACTGA+AGG | + | chr5_1:8404292-8404311 | None:intergenic | 50.0% | |
| GCGTGAGCTCATAGATCCAA+GGG | + | chr5_1:8404350-8404369 | None:intergenic | 50.0% | |
| CTTGGATCTATGAGCTCACG+CGG | - | chr5_1:8404349-8404368 | Msa0715360:CDS | 50.0% | |
| CTCACGCGGTACACTGTATA+AGG | - | chr5_1:8404363-8404382 | Msa0715360:CDS | 50.0% | |
| ACGCGGTACACTGTATAAGG+AGG | - | chr5_1:8404366-8404385 | Msa0715360:CDS | 50.0% | |
| CAGTCCTGCACATAGGTCTA+TGG | + | chr5_1:8404876-8404895 | None:intergenic | 50.0% | |
| CATAGACCTATGTGCAGGAC+TGG | - | chr5_1:8404874-8404893 | Msa0715360:intron | 50.0% | |
| TCCAAGCGAGTACCAGGATA+GGG | - | chr5_1:8404999-8405018 | Msa0715360:intron | 50.0% | |
| CGGACAGTATACAGCATGAC+AGG | + | chr5_1:8405897-8405916 | None:intergenic | 50.0% | |
| GTCATGCTGTATACTGTCCG+TGG | - | chr5_1:8405897-8405916 | Msa0715360:CDS | 50.0% | |
| CTGTATACTGTCCGTGGTTC+TGG | - | chr5_1:8405903-8405922 | Msa0715360:CDS | 50.0% | |
| CTTTCCGAATGGCACCAGTT+GGG | - | chr5_1:8406459-8406478 | Msa0715360:intron | 50.0% | |
| TCCATGAAAATCCACAGCCC+CGG | + | chr5_1:8406510-8406529 | None:intergenic | 50.0% | |
| TTGGCCAGTCTGTGAATCAC+TGG | - | chr5_1:8407164-8407183 | Msa0715360:intron | 50.0% | |
| ACCTCCAGTGATTCACAGAC+TGG | + | chr5_1:8407171-8407190 | None:intergenic | 50.0% | |
| ACTAGGTGAGTTCGGCTACA+TGG | - | chr5_1:8407247-8407266 | Msa0715360:intron | 50.0% | |
| !! | ATGATGGGTACCAGACAGTG+AGG | - | chr5_1:8407629-8407648 | Msa0715360:intron | 50.0% |
| AAAATGTACTCCCTCCGTCC+CGG | - | chr5_1:8407653-8407672 | Msa0715360:intron | 50.0% | |
| CCGGAATATCTGAGCCAGTT+TGG | - | chr5_1:8407672-8407691 | Msa0715360:intron | 50.0% | |
| ATGGGTCAGATATTCCGGGA+CGG | - | chr5_1:8407862-8407881 | Msa0715360:intron | 50.0% | |
| ATCTAATACTCCCTCCGTCC+CGG | + | chr5_1:8407879-8407898 | None:intergenic | 50.0% | |
| GTCCTGTATGACAGGGATTG+CGG | - | chr5_1:8407909-8407928 | Msa0715360:intron | 50.0% | |
| TCCTGTATGACAGGGATTGC+GGG | - | chr5_1:8407910-8407929 | Msa0715360:intron | 50.0% | |
| TGAGAGTGGGGGATTATGGA+GGG | + | chr5_1:8408054-8408073 | None:intergenic | 50.0% | |
| TCTGTGAGAGTGGGGGATTA+TGG | + | chr5_1:8408058-8408077 | None:intergenic | 50.0% | |
| ! | GCTGAACAACGGCCTTGTAT+CGG | + | chr5_1:8408378-8408397 | None:intergenic | 50.0% |
| AATGGCAAGGGAATAGGCAG+GGG | + | chr5_1:8408422-8408441 | None:intergenic | 50.0% | |
| GAAATGGCAAGGGAATAGGC+AGG | + | chr5_1:8408424-8408443 | None:intergenic | 50.0% | |
| ! | GGAAACCAGGTTGGCAAGTA+CGG | - | chr5_1:8408455-8408474 | Msa0715360:intron | 50.0% |
| ATTCACCGTACTTGCCAACC+TGG | + | chr5_1:8408463-8408482 | None:intergenic | 50.0% | |
| GGGAATGGAATGGACGTCAA+GGG | + | chr5_1:8408525-8408544 | None:intergenic | 50.0% | |
| TGGGAATGGAATGGACGTCA+AGG | + | chr5_1:8408526-8408545 | None:intergenic | 50.0% | |
| TGACGTCCATTCCATTCCCA+TGG | - | chr5_1:8408526-8408545 | Msa0715360:intron | 50.0% | |
| TAATCTGGCAGCCATGGGAA+TGG | + | chr5_1:8408540-8408559 | None:intergenic | 50.0% | |
| GAACGTAATCTGGCAGCCAT+GGG | + | chr5_1:8408545-8408564 | None:intergenic | 50.0% | |
| AGCACTGCTGGAACGTAATC+TGG | + | chr5_1:8408555-8408574 | None:intergenic | 50.0% | |
| !!! | CAGTGCTGTCTTGCCACTTT+TGG | - | chr5_1:8408568-8408587 | Msa0715360:intron | 50.0% |
| CACCGGTATGGAATTACACG+AGG | - | chr5_1:8408611-8408630 | Msa0715360:intron | 50.0% | |
| GGCAGAGTTACTTAGGGGTT+GGG | - | chr5_1:8408643-8408662 | Msa0715360:intron | 50.0% | |
| GCAGAGTTACTTAGGGGTTG+GGG | - | chr5_1:8408644-8408663 | Msa0715360:intron | 50.0% | |
| TTACTTAGGGGTTGGGGCTT+CGG | - | chr5_1:8408650-8408669 | Msa0715360:intron | 50.0% | |
| CAACTCAGGAGGACACAATG+TGG | + | chr5_1:8408723-8408742 | None:intergenic | 50.0% | |
| TTTAATGCTCCCCACCCTCA+TGG | - | chr5_1:8408859-8408878 | Msa0715360:intron | 50.0% | |
| CGAGGCTCCATAAATCAGCA+GGG | + | chr5_1:8408994-8409013 | None:intergenic | 50.0% | |
| GCCTAACATTCCACAGAAGC+TGG | - | chr5_1:8409031-8409050 | Msa0715360:intron | 50.0% | |
| TGAAGGACATAAGCTCAGGC+TGG | - | chr5_1:8409124-8409143 | Msa0715360:intron | 50.0% | |
| GAAGGACATAAGCTCAGGCT+GGG | - | chr5_1:8409125-8409144 | Msa0715360:intron | 50.0% | |
| ! | GCTGGGTCTGCATGTGTTTT+CGG | - | chr5_1:8409142-8409161 | Msa0715360:five_prime_UTR | 50.0% |
| !! | GCAACGGGTTAGGGGTTATG+AGG | + | chr5_1:8401885-8401904 | None:intergenic | 55.0% |
| ! | AGGCCGAGAAGCTTTGGCAA+CGG | + | chr5_1:8401901-8401920 | None:intergenic | 55.0% |
| GTTTGCAGGCCGAGAAGCTT+TGG | + | chr5_1:8401907-8401926 | None:intergenic | 55.0% | |
| !! | TGAGTTGATTGGGTTGGCCG+CGG | - | chr5_1:8402319-8402338 | Msa0715360:three_prime_UTR | 55.0% |
| TGAATCAGCTTGAGGGTCCG+CGG | + | chr5_1:8402339-8402358 | None:intergenic | 55.0% | |
| ! | TCGTACCGGTCAGACACTAC+AGG | - | chr5_1:8402397-8402416 | Msa0715360:CDS | 55.0% |
| ! | CTCTTGTGGTTTGCCTCGAG+TGG | - | chr5_1:8402501-8402520 | Msa0715360:CDS | 55.0% |
| TGGGCCTATGGAGTTCGTCT+CGG | + | chr5_1:8402615-8402634 | None:intergenic | 55.0% | |
| CGCGTGAGCTCATAGATCCA+AGG | + | chr5_1:8404351-8404370 | None:intergenic | 55.0% | |
| AGACCTATGTGCAGGACTGG+TGG | - | chr5_1:8404877-8404896 | Msa0715360:intron | 55.0% | |
| ACTCCACCAGTCCTGCACAT+AGG | + | chr5_1:8404883-8404902 | None:intergenic | 55.0% | |
| TGGTTCTCCAAGCGAGTACC+AGG | - | chr5_1:8404993-8405012 | Msa0715360:intron | 55.0% | |
| CTCCAAGCGAGTACCAGGAT+AGG | - | chr5_1:8404998-8405017 | Msa0715360:intron | 55.0% | |
| TCCCTATCCTGGTACTCGCT+TGG | + | chr5_1:8405003-8405022 | None:intergenic | 55.0% | |
| !! | CCAACTGGTGCCATTCGGAA+AGG | + | chr5_1:8406461-8406480 | None:intergenic | 55.0% |
| CCTTTCCGAATGGCACCAGT+TGG | - | chr5_1:8406458-8406477 | Msa0715360:intron | 55.0% | |
| !! | TAGGCCCAACTGGTGCCATT+CGG | + | chr5_1:8406466-8406485 | None:intergenic | 55.0% |
| ATGTTCTGTTTCCGGGGCTG+TGG | - | chr5_1:8406496-8406515 | Msa0715360:intron | 55.0% | |
| ! | TCCGGGGCTGTGGATTTTCA+TGG | - | chr5_1:8406506-8406525 | Msa0715360:intron | 55.0% |
| AGGGCAAGGACGGCAGAATA+TGG | - | chr5_1:8406547-8406566 | Msa0715360:intron | 55.0% | |
| GCCAGTCTGTGAATCACTGG+AGG | - | chr5_1:8407167-8407186 | Msa0715360:intron | 55.0% | |
| CTCAGATATTCCGGGACGGA+GGG | + | chr5_1:8407666-8407685 | None:intergenic | 55.0% | |
| CTGGCTCAGATATTCCGGGA+CGG | + | chr5_1:8407670-8407689 | None:intergenic | 55.0% | |
| GTCAGATATTCCGGGACGGA+GGG | - | chr5_1:8407866-8407885 | Msa0715360:intron | 55.0% | |
| TCCCGCAATCCCTGTCATAC+AGG | + | chr5_1:8407914-8407933 | None:intergenic | 55.0% | |
| GGGGATTATGGAGGGTAGGT+TGG | + | chr5_1:8408046-8408065 | None:intergenic | 55.0% | |
| AGTGGGGGATTATGGAGGGT+AGG | + | chr5_1:8408050-8408069 | None:intergenic | 55.0% | |
| GTGAGAGTGGGGGATTATGG+AGG | + | chr5_1:8408055-8408074 | None:intergenic | 55.0% | |
| TGGCAGCCATGGGAATGGAA+TGG | + | chr5_1:8408535-8408554 | None:intergenic | 55.0% | |
| GGAACGTAATCTGGCAGCCA+TGG | + | chr5_1:8408546-8408565 | None:intergenic | 55.0% | |
| AAGTGGCAAGACAGCACTGC+TGG | + | chr5_1:8408567-8408586 | None:intergenic | 55.0% | |
| GAATTACACGAGGAGCCGCT+GGG | - | chr5_1:8408621-8408640 | Msa0715360:intron | 55.0% | |
| AATTACACGAGGAGCCGCTG+GGG | - | chr5_1:8408622-8408641 | Msa0715360:intron | 55.0% | |
| CCTAAGTAACTCTGCCCCAG+CGG | + | chr5_1:8408639-8408658 | None:intergenic | 55.0% | |
| CGCTGGGGCAGAGTTACTTA+GGG | - | chr5_1:8408637-8408656 | Msa0715360:intron | 55.0% | |
| GCTGGGGCAGAGTTACTTAG+GGG | - | chr5_1:8408638-8408657 | Msa0715360:intron | 55.0% | |
| GGGCAGAGTTACTTAGGGGT+TGG | - | chr5_1:8408642-8408661 | Msa0715360:intron | 55.0% | |
| ! | AGAGCAAAGCACCCGAGTAG+GGG | + | chr5_1:8408965-8408984 | None:intergenic | 55.0% |
| ! | CAGAGCAAAGCACCCGAGTA+GGG | + | chr5_1:8408966-8408985 | None:intergenic | 55.0% |
| ! | ACAGAGCAAAGCACCCGAGT+AGG | + | chr5_1:8408967-8408986 | None:intergenic | 55.0% |
| GCGAGGCTCCATAAATCAGC+AGG | + | chr5_1:8408995-8409014 | None:intergenic | 55.0% | |
| CCACCTAGAACCAGCTTCTG+TGG | + | chr5_1:8409044-8409063 | None:intergenic | 55.0% | |
| !! | CCACAGAAGCTGGTTCTAGG+TGG | - | chr5_1:8409041-8409060 | Msa0715360:intron | 55.0% |
| ! | GGCCGAGAAGCTTTGGCAAC+GGG | + | chr5_1:8401900-8401919 | None:intergenic | 60.0% |
| CAGAGCACAGGCAGTAGCTG+CGG | + | chr5_1:8401951-8401970 | None:intergenic | 60.0% | |
| CGGCATGCAGCCTCGATTGT+GGG | + | chr5_1:8402817-8402836 | None:intergenic | 60.0% | |
| ACGGCATGCAGCCTCGATTG+TGG | + | chr5_1:8402818-8402837 | None:intergenic | 60.0% | |
| ATCGAGGCTGCATGCCGTTG+TGG | - | chr5_1:8402820-8402839 | Msa0715360:intron | 60.0% | |
| CTGAGGTTCAGAGGCTTGGG+TGG | + | chr5_1:8404908-8404927 | None:intergenic | 60.0% | |
| CTCTGGTGGTTTCTCCTCCG+TGG | - | chr5_1:8405827-8405846 | Msa0715360:intron | 60.0% | |
| !! | CTGTCCGTGGTTCTGGTCCA+CGG | - | chr5_1:8405910-8405929 | Msa0715360:CDS | 60.0% |
| !! | TGTCCGTGGTTCTGGTCCAC+GGG | - | chr5_1:8405911-8405930 | Msa0715360:CDS | 60.0% |
| CTTAAGGAGGGCAGGCCAAC+AGG | + | chr5_1:8406029-8406048 | None:intergenic | 60.0% | |
| GCATCTGCAGTAGGCCCAAC+TGG | + | chr5_1:8406476-8406495 | None:intergenic | 60.0% | |
| GCTCAGATATTCCGGGACGG+AGG | + | chr5_1:8407667-8407686 | None:intergenic | 60.0% | |
| GGTCAGATATTCCGGGACGG+AGG | - | chr5_1:8407865-8407884 | Msa0715360:intron | 60.0% | |
| CCAGGGAGTAGGGAGACACT+AGG | + | chr5_1:8408008-8408027 | None:intergenic | 60.0% | |
| CCTAGTGTCTCCCTACTCCC+TGG | - | chr5_1:8408005-8408024 | Msa0715360:intron | 60.0% | |
| GGAATTACACGAGGAGCCGC+TGG | - | chr5_1:8408620-8408639 | Msa0715360:intron | 60.0% | |
| CCGCTGGGGCAGAGTTACTT+AGG | - | chr5_1:8408636-8408655 | Msa0715360:intron | 60.0% | |
| TTTATGGAGCCTCGCCCGTG+TGG | - | chr5_1:8409000-8409019 | Msa0715360:CDS | 60.0% | |
| CAAGGTTAACCACACGGGCG+AGG | + | chr5_1:8409012-8409031 | None:intergenic | 60.0% | |
| AGCACAGGCAGTAGCTGCGG+CGG | + | chr5_1:8401948-8401967 | None:intergenic | 65.0% | |
| GTGCCCGTGGACCAGAACCA+CGG | + | chr5_1:8405917-8405936 | None:intergenic | 65.0% | |
| CACGGGCACGTCTTCAGAGC+CGG | - | chr5_1:8405928-8405947 | Msa0715360:CDS | 65.0% | |
| CTCGGCCTGCAAACTCGCGC+CGG | - | chr5_1:8401913-8401932 | Msa0715360:three_prime_UTR | 70.0% | |
| CAGGCAGTAGCTGCGGCGGA+GGG | + | chr5_1:8401944-8401963 | None:intergenic | 70.0% | |
| ACAGGCAGTAGCTGCGGCGG+AGG | + | chr5_1:8401945-8401964 | None:intergenic | 70.0% | |
| !! | CGGCTCTGAAGACGTGCCCG+TGG | + | chr5_1:8405930-8405949 | None:intergenic | 70.0% |
| !! | CGGTGCCGGCGCGAGTTTGC+AGG | + | chr5_1:8401921-8401940 | None:intergenic | 75.0% |
| GCAGTAGCTGCGGCGGAGGG+CGG | + | chr5_1:8401941-8401960 | None:intergenic | 75.0% | |
| ! | GCTGCGGCGGAGGGCGGTGC+CGG | + | chr5_1:8401935-8401954 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 8401794 | 8409327 | 8401794 | ID=Msa0715360;Name=Msa0715360 |
| chr5_1 | mRNA | 8401794 | 8409327 | 8401794 | ID=Msa0715360-mRNA-1;Parent=Msa0715360;Name=Msa0715360-mRNA-1;_AED=0.06;_eAED=0.06;_QI=211|1|1|1|0.88|0.8|10|567|566 |
| chr5_1 | exon | 8401794 | 8402809 | 8401794 | ID=Msa0715360-mRNA-1:exon:3485;Parent=Msa0715360-mRNA-1 |
| chr5_1 | exon | 8404321 | 8404440 | 8404321 | ID=Msa0715360-mRNA-1:exon:3484;Parent=Msa0715360-mRNA-1 |
| chr5_1 | exon | 8404510 | 8404752 | 8404510 | ID=Msa0715360-mRNA-1:exon:3483;Parent=Msa0715360-mRNA-1 |
| chr5_1 | exon | 8405074 | 8405317 | 8405074 | ID=Msa0715360-mRNA-1:exon:3482;Parent=Msa0715360-mRNA-1 |
| chr5_1 | exon | 8405882 | 8406230 | 8405882 | ID=Msa0715360-mRNA-1:exon:3481;Parent=Msa0715360-mRNA-1 |
| chr5_1 | exon | 8406702 | 8406777 | 8406702 | ID=Msa0715360-mRNA-1:exon:3480;Parent=Msa0715360-mRNA-1 |
| chr5_1 | exon | 8407972 | 8408017 | 8407972 | ID=Msa0715360-mRNA-1:exon:3479;Parent=Msa0715360-mRNA-1 |
| chr5_1 | exon | 8408703 | 8408804 | 8408703 | ID=Msa0715360-mRNA-1:exon:3478;Parent=Msa0715360-mRNA-1 |
| chr5_1 | exon | 8408950 | 8409030 | 8408950 | ID=Msa0715360-mRNA-1:exon:3477;Parent=Msa0715360-mRNA-1 |
| chr5_1 | exon | 8409126 | 8409327 | 8409126 | ID=Msa0715360-mRNA-1:exon:3476;Parent=Msa0715360-mRNA-1 |
| chr5_1 | five_prime_UTR | 8409126 | 8409327 | 8409126 | ID=Msa0715360-mRNA-1:five_prime_utr;Parent=Msa0715360-mRNA-1 |
| chr5_1 | five_prime_UTR | 8409022 | 8409030 | 8409022 | ID=Msa0715360-mRNA-1:five_prime_utr;Parent=Msa0715360-mRNA-1 |
| chr5_1 | CDS | 8408950 | 8409021 | 8408950 | ID=Msa0715360-mRNA-1:cds;Parent=Msa0715360-mRNA-1 |
| chr5_1 | CDS | 8408703 | 8408804 | 8408703 | ID=Msa0715360-mRNA-1:cds;Parent=Msa0715360-mRNA-1 |
| chr5_1 | CDS | 8407972 | 8408017 | 8407972 | ID=Msa0715360-mRNA-1:cds;Parent=Msa0715360-mRNA-1 |
| chr5_1 | CDS | 8406702 | 8406777 | 8406702 | ID=Msa0715360-mRNA-1:cds;Parent=Msa0715360-mRNA-1 |
| chr5_1 | CDS | 8405882 | 8406230 | 8405882 | ID=Msa0715360-mRNA-1:cds;Parent=Msa0715360-mRNA-1 |
| chr5_1 | CDS | 8405074 | 8405317 | 8405074 | ID=Msa0715360-mRNA-1:cds;Parent=Msa0715360-mRNA-1 |
| chr5_1 | CDS | 8404510 | 8404752 | 8404510 | ID=Msa0715360-mRNA-1:cds;Parent=Msa0715360-mRNA-1 |
| chr5_1 | CDS | 8404321 | 8404440 | 8404321 | ID=Msa0715360-mRNA-1:cds;Parent=Msa0715360-mRNA-1 |
| chr5_1 | CDS | 8402361 | 8402809 | 8402361 | ID=Msa0715360-mRNA-1:cds;Parent=Msa0715360-mRNA-1 |
| chr5_1 | three_prime_UTR | 8401794 | 8402360 | 8401794 | ID=Msa0715360-mRNA-1:three_prime_utr;Parent=Msa0715360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
