AlfalfaGEDB | Msa0716940

M. sativa cultivar zhongmu-4 / Msa0716940

KEGG: -
GO: GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009555 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009908 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010476 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010648 GO:0019219 GO:0019222 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046982 GO:0046983 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0048608 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0080090 GO:0090567 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
PFAM: PF05142.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0716940	XP_003612086.1	87.842	329	21	7	1	316	1	323	0.0	524

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0716940	sp\|Q9SD40\|SRS1_ARATH	43.636	385	133	13	1	316	1	370	2.21e-74	236

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0716940	G7KGA2	87.842	329	21	7	1	316	1	323	0.0	524

TFs/TRs:

Gene ID	Type	Classification
Msa0716940	TF	SRS

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0716940	Msa0837760	0.868417	6.631608e-66	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0716940	MtrunA17_Chr5g0404781	87.842	329	21	7	1	316	1	323	0.0	524
Msa0716940	MtrunA17_Chr8g0372461	54.624	346	112	12	1	316	1	331	3.43e-95	285
Msa0716940	MtrunA17_Chr3g0142171	42.320	319	145	12	1	311	1	288	4.86e-62	199
Msa0716940	MtrunA17_Chr1g0155791	53.043	230	83	7	101	316	120	338	3.88e-60	195
Msa0716940	MtrunA17_Chr4g0035591	43.478	161	71	1	85	245	2	142	7.74e-40	139
Msa0716940	MtrunA17_Chr5g0441921	49.045	157	60	3	103	243	124	276	9.83e-40	142
Msa0716940	MtrunA17_Chr3g0082511	43.750	160	74	3	103	248	134	291	2.63e-38	138
Msa0716940	MtrunA17_Chr8g0353111	42.857	168	76	3	103	251	124	290	3.36e-34	127
Msa0716940	MtrunA17_Chr2g0281741	31.707	123	52	5	21	137	88	184	1.21e-13	68.6
Msa0716940	MtrunA17_Chr0c01g0489181	52.174	46	22	0	92	137	56	101	2.82e-12	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0716940	AT3G51060.1	43.636	385	133	13	1	316	1	370	2.24e-75	236
Msa0716940	AT5G66350.1	48.034	356	120	16	1	316	1	331	6.08e-73	228
Msa0716940	AT5G66350.3	48.105	343	115	15	1	303	1	320	1.87e-70	222
Msa0716940	AT5G66350.2	48.105	343	115	15	1	303	1	320	3.20e-70	221
Msa0716940	AT1G19790.2	40.385	364	148	14	1	315	1	344	2.55e-66	212
Msa0716940	AT1G19790.1	40.385	364	148	14	1	315	1	344	2.55e-66	212
Msa0716940	AT1G75520.1	51.667	240	80	9	99	316	121	346	4.91e-65	208
Msa0716940	AT4G36260.1	38.690	336	167	13	1	314	1	319	5.28e-50	169
Msa0716940	AT2G18120.1	42.460	252	87	10	1	245	6	206	5.65e-47	158
Msa0716940	AT2G18120.2	41.833	251	88	10	1	245	6	204	4.27e-45	153
Msa0716940	AT2G21400.2	52.055	146	55	3	100	243	7	139	3.28e-44	150
Msa0716940	AT2G21400.4	52.055	146	55	3	100	243	6	138	3.63e-44	149
Msa0716940	AT2G21400.3	50.676	148	39	3	100	243	7	124	2.13e-43	147
Msa0716940	AT2G21400.1	50.676	148	39	3	100	243	6	123	2.38e-43	147
Msa0716940	AT5G12330.1	45.570	158	69	2	103	243	112	269	4.95e-37	135
Msa0716940	AT5G12330.2	45.570	158	69	2	103	243	112	269	4.95e-37	135
Msa0716940	AT5G12330.4	45.570	158	69	2	103	243	199	356	8.98e-37	136
Msa0716940	AT5G33210.2	60.920	87	26	1	101	179	15	101	7.01e-29	107
Msa0716940	AT5G33210.1	60.920	87	26	1	101	179	50	136	2.25e-28	108
Msa0716940	AT3G54430.1	39.597	149	77	4	99	246	37	173	2.19e-27	105
Msa0716940	AT5G12330.3	86.957	46	6	0	103	148	112	157	6.41e-23	95.1

Find 93 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACAAATTCACTTTGAAATA+TGG	0.160002	5_1:+10529112	None:intergenic
GAATAGATCTACTGTGTTTC+TGG	0.193828	5_1:-10528718	Msa0716940:CDS
GACAGAAGAGATAAGGTTTA+AGG	0.199519	5_1:+10527569	None:intergenic
CCATGTTGTTGAGATGATTT+AGG	0.214641	5_1:+10528510	None:intergenic
ATTCAGAGCCTTAACAAATT+AGG	0.215692	5_1:-10527426	Msa0716940:three_prime_UTR
TACTCCTCTGGTGTTGTGTT+AGG	0.305453	5_1:-10528774	Msa0716940:CDS
ATAATCCAACAACAGAATTC+TGG	0.358326	5_1:-10528920	Msa0716940:CDS
GAATTGAAGGTTTGGTTAGT+TGG	0.366672	5_1:+10529229	None:intergenic
CACTTACATTAATAACTACT+AGG	0.367469	5_1:+10529201	None:intergenic
ACTAGAATTAGAGGCGTTTC+CGG	0.373528	5_1:+10527620	None:intergenic
TCCCTGATGCTACTGCTGTT+GGG	0.375712	5_1:-10527548	Msa0716940:CDS
TGGGAATAATAGTTACAATA+TGG	0.377378	5_1:-10527646	Msa0716940:CDS
AGAGTGAGTGAAGGGTTTGT+AGG	0.387801	5_1:+10528438	None:intergenic
CATATTTCAAAGTGAATTTG+TGG	0.392116	5_1:-10529111	Msa0716940:five_prime_UTR
TTATACCAGAATTCTGTTGT+TGG	0.398181	5_1:+10528915	None:intergenic
TAACTATTATTCCCATGATC+TGG	0.405584	5_1:+10527654	None:intergenic
TGAATTCTCCAGCAGAGTTC+AGG	0.409422	5_1:-10527782	Msa0716940:CDS
CTACTAGGGTAAAGAATTGA+AGG	0.411713	5_1:+10529216	None:intergenic
TATGATTATGGTCCAGATCA+TGG	0.413474	5_1:-10527666	Msa0716940:CDS
TGAATGATGAATCAAGATCT+TGG	0.413551	5_1:+10527444	None:intergenic
CTTTCTCTTCTTCTAGCAGC+AGG	0.421698	5_1:+10528555	None:intergenic
GTCCCTGATGCTACTGCTGT+TGG	0.422352	5_1:-10527549	Msa0716940:CDS
AGGGTAAAGAATTGAAGGTT+TGG	0.424136	5_1:+10529221	None:intergenic
AAACTCATGTTAAGAGTACT+TGG	0.425175	5_1:-10528581	Msa0716940:CDS
AATTTGTGGTTAAATTTGAT+TGG	0.429606	5_1:-10529097	Msa0716940:five_prime_UTR
ACAGAAGAGATAAGGTTTAA+GGG	0.430955	5_1:+10527570	None:intergenic
GGTTTGGAATAGTAGTAGTA+TGG	0.434106	5_1:-10528991	Msa0716940:exon
CTGGGAAGTGGAAGTGGAAG+TGG	0.435234	5_1:-10528699	Msa0716940:CDS
TCCCCAACAGCAGTAGCATC+AGG	0.439192	5_1:+10527546	None:intergenic
TGTTAGGAGTGGGACCTACT+AGG	0.445348	5_1:-10528758	Msa0716940:CDS
GAGTGTACCACTAGAATTAG+AGG	0.455284	5_1:+10527611	None:intergenic
GCTGGAGAATTCACCACAGC+TGG	0.457156	5_1:+10527792	None:intergenic
GGTATAAGTTGTCAAGATTG+TGG	0.462555	5_1:-10528675	Msa0716940:CDS
TGGAATAGTAGTAGTATGGC+TGG	0.464468	5_1:-10528987	Msa0716940:exon
CAACAAGATCTTTACTCCTC+TGG	0.470648	5_1:-10528786	Msa0716940:CDS
AAGAATTGCGTACCACTAGA+AGG	0.471301	5_1:+10527474	None:intergenic
TCTAGTGGTACACTCCTTGA+AGG	0.471939	5_1:-10527603	Msa0716940:CDS
TCTACTGTGTTTCTGGGAAG+TGG	0.473087	5_1:-10528711	Msa0716940:CDS
GAATGATGAATCAAGATCTT+GGG	0.474567	5_1:+10527445	None:intergenic
TTGTTGGATTATTATTCTGT+TGG	0.477389	5_1:+10528931	None:intergenic
AAAACAAGTGTTGTTGATGT+TGG	0.482819	5_1:+10528838	None:intergenic
AATAGATCTACTGTGTTTCT+GGG	0.484678	5_1:-10528717	Msa0716940:CDS
CCCTGATGCTACTGCTGTTG+GGG	0.488129	5_1:-10527547	Msa0716940:CDS
CTCACGCACCTGAACTCTGC+TGG	0.492218	5_1:+10527774	None:intergenic
GTTAGGAGTGGGACCTACTA+GGG	0.499651	5_1:-10528757	Msa0716940:CDS
AGGGCTGAGCCACCCCTTCA+AGG	0.501243	5_1:+10527589	None:intergenic
CATCAGGGACAGAAGAGATA+AGG	0.508932	5_1:+10527562	None:intergenic
GTGTTTCTGGGAAGTGGAAG+TGG	0.512399	5_1:-10528705	Msa0716940:CDS
TCAGAAGAACAAACCCTAGT+AGG	0.513659	5_1:+10528744	None:intergenic
AAGGTTTGGTTAGTTGGTTG+AGG	0.513889	5_1:+10529235	None:intergenic
TCACTCACTCTCCCTTCAGC+AGG	0.521572	5_1:-10528426	Msa0716940:intron
GTATAAGTTGTCAAGATTGT+GGG	0.521679	5_1:-10528674	Msa0716940:CDS
CTCTGGTGTTGTGTTAGGAG+TGG	0.527736	5_1:-10528769	Msa0716940:CDS
TAAACGAGTGCAAGCTAAAG+AGG	0.530926	5_1:+10528461	None:intergenic
TCTGGTGTTGTGTTAGGAGT+GGG	0.532211	5_1:-10528768	Msa0716940:CDS
CTAGTGGTACACTCCTTGAA+GGG	0.532650	5_1:-10527602	Msa0716940:CDS
ATGAAGGAATTAAGTGGAGC+TGG	0.538890	5_1:+10527498	None:intergenic
AGAACTTGTTGTAAAAGTAG+AGG	0.550532	5_1:-10528615	Msa0716940:CDS
AATAGTTACAATATGGCTAC+CGG	0.553111	5_1:-10527639	Msa0716940:CDS
GGAGCTGGATACAAAGAAGA+AGG	0.554978	5_1:+10527513	None:intergenic
TCAACAGCTGTAAACATTGG+AGG	0.560848	5_1:-10527711	Msa0716940:CDS
CAAGTTCTACATCTCATATG+AGG	0.561087	5_1:+10528630	None:intergenic
GAAGGCATGAAGGAATTAAG+TGG	0.562752	5_1:+10527492	None:intergenic
ATGATTATGGTCCAGATCAT+GGG	0.563960	5_1:-10527665	Msa0716940:CDS
GTTGTTTCTAATTCATACCG+TGG	0.564425	5_1:-10528876	Msa0716940:CDS
ATGAATCAAGATCTTGGGTG+GGG	0.569684	5_1:+10527450	None:intergenic
AATTCCTTCATGCCTTCTAG+TGG	0.576741	5_1:-10527486	Msa0716940:CDS
TGGTACACTCCTTGAAGGGG+TGG	0.576962	5_1:-10527598	Msa0716940:CDS
ACTTACATTAATAACTACTA+GGG	0.577603	5_1:+10529202	None:intergenic
GTGAGACAGAGAAGTGGGCG+TGG	0.577844	5_1:-10529357	Msa0716940:five_prime_UTR
TTAGAGTGAGACAGAGAAGT+GGG	0.585642	5_1:-10529362	Msa0716940:five_prime_UTR
ATATATAATATACCTGCTGA+AGG	0.587423	5_1:+10528414	None:intergenic
TGATGAATCAAGATCTTGGG+TGG	0.587902	5_1:+10527448	None:intergenic
TATTCAACAGCTGTAAACAT+TGG	0.588034	5_1:-10527714	Msa0716940:CDS
CTGAAGGGAGAGTGAGTGAA+GGG	0.593490	5_1:+10528430	None:intergenic
CCTAAATCATCTCAACAACA+TGG	0.595265	5_1:-10528510	Msa0716940:CDS
CAACAGCTGTAAACATTGGA+GGG	0.602052	5_1:-10527710	Msa0716940:CDS
GGAAGTGGAAGTGGAAGTGG+AGG	0.605166	5_1:-10528696	Msa0716940:CDS
GATGAATCAAGATCTTGGGT+GGG	0.609126	5_1:+10527449	None:intergenic
CCCCAACAGCAGTAGCATCA+GGG	0.616436	5_1:+10527547	None:intergenic
CTCAGTTGATGAGAACGAAG+AGG	0.617435	5_1:-10527745	Msa0716940:CDS
CGTACCACTAGAAGGCATGA+AGG	0.617919	5_1:+10527482	None:intergenic
AACTCATGTTAAGAGTACTT+GGG	0.622414	5_1:-10528580	Msa0716940:CDS
TGAATCAAGATCTTGGGTGG+GGG	0.629021	5_1:+10527451	None:intergenic
TATATAATATACCTGCTGAA+GGG	0.636400	5_1:+10528415	None:intergenic
ATTAGAGTGAGACAGAGAAG+TGG	0.638617	5_1:-10529363	Msa0716940:five_prime_UTR
TAGTGGTACACTCCTTGAAG+GGG	0.649565	5_1:-10527601	Msa0716940:CDS
GCTGAAGGGAGAGTGAGTGA+AGG	0.652710	5_1:+10528429	None:intergenic
AGACAGAGAAGTGGGCGTGG+CGG	0.664015	5_1:-10529354	Msa0716940:five_prime_UTR
CACTCCTAACACAACACCAG+AGG	0.667381	5_1:+10528770	None:intergenic
GTATACATATATATAGATCG+AGG	0.691769	5_1:-10529046	Msa0716940:five_prime_UTR
GGAAACGCCTCTAATTCTAG+TGG	0.698556	5_1:-10527618	Msa0716940:CDS
GGTTCCAAATCTCAAAACCA+CGG	0.709690	5_1:+10528859	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGTTAATTATCATAAAAAAA+AGG	-	chr5_1:10529002-10529021	Msa0716940:five_prime_UTR	10.0%
!!	GTTAATTATCATAAAAAAAA+GGG	-	chr5_1:10529003-10529022	Msa0716940:five_prime_UTR	10.0%
!!	TGTTAATTATCATAAAAAAA+AGG	-	chr5_1:10529002-10529021	Msa0716940:five_prime_UTR	10.0%
!!	GTTAATTATCATAAAAAAAA+GGG	-	chr5_1:10529003-10529022	Msa0716940:five_prime_UTR	10.0%
!!	TAAATATGTATATATCATCA+TGG	+	chr5_1:10528946-10528965	None:intergenic	15.0%
!!!	TTTTTTTTCCTAATTTGTTA+AGG	+	chr5_1:10529424-10529443	None:intergenic	15.0%
!!	TAAATATGTATATATCATCA+TGG	+	chr5_1:10528946-10528965	None:intergenic	15.0%
!!!	TTTTTTTTCCTAATTTGTTA+AGG	+	chr5_1:10529424-10529443	None:intergenic	15.0%
!!	ACTTACATTAATAACTACTA+GGG	+	chr5_1:10527640-10527659	None:intergenic	20.0%
!!	AATTTGTGGTTAAATTTGAT+TGG	-	chr5_1:10527742-10527761	Msa0716940:CDS	20.0%
!!!	AGGTTTTTTTTTTCTTGATA+TGG	-	chr5_1:10527813-10527832	Msa0716940:CDS	20.0%
!!	AAACAAACAAACTATAAGTT+AGG	+	chr5_1:10528969-10528988	None:intergenic	20.0%
!!	ACTTACATTAATAACTACTA+GGG	+	chr5_1:10527640-10527659	None:intergenic	20.0%
!!	AATTTGTGGTTAAATTTGAT+TGG	-	chr5_1:10527742-10527761	Msa0716940:CDS	20.0%
!!!	AGGTTTTTTTTTTCTTGATA+TGG	-	chr5_1:10527813-10527832	Msa0716940:CDS	20.0%
!!	AAACAAACAAACTATAAGTT+AGG	+	chr5_1:10528969-10528988	None:intergenic	20.0%
!	CACTTACATTAATAACTACT+AGG	+	chr5_1:10527641-10527660	None:intergenic	25.0%
!!!	CACAAATTCACTTTGAAATA+TGG	+	chr5_1:10527730-10527749	None:intergenic	25.0%
!	CATATTTCAAAGTGAATTTG+TGG	-	chr5_1:10527728-10527747	Msa0716940:CDS	25.0%
!	GTATACATATATATAGATCG+AGG	-	chr5_1:10527793-10527812	Msa0716940:CDS	25.0%
!	TTGTTGGATTATTATTCTGT+TGG	+	chr5_1:10527911-10527930	None:intergenic	25.0%
!	TATATAATATACCTGCTGAA+GGG	+	chr5_1:10528427-10528446	None:intergenic	25.0%
!	ATATATAATATACCTGCTGA+AGG	+	chr5_1:10528428-10528447	None:intergenic	25.0%
!	GACATATATGAACAAAGAAA+AGG	+	chr5_1:10528781-10528800	None:intergenic	25.0%
!	ATAAAAAAAAGGGCTATTAG+AGG	-	chr5_1:10529013-10529032	Msa0716940:five_prime_UTR	25.0%
!!	AGAGGAATTTTGTATGATTA+TGG	-	chr5_1:10529161-10529180	Msa0716940:five_prime_UTR	25.0%
!	TGGGAATAATAGTTACAATA+TGG	-	chr5_1:10529193-10529212	Msa0716940:five_prime_UTR	25.0%
!!!	TCTTTAAGTTTTTTCTGTTC+GGG	+	chr5_1:10527366-10527385	None:intergenic	25.0%
!!!	GTCTTTAAGTTTTTTCTGTT+CGG	+	chr5_1:10527367-10527386	None:intergenic	25.0%
!	CACTTACATTAATAACTACT+AGG	+	chr5_1:10527641-10527660	None:intergenic	25.0%
!!!	CACAAATTCACTTTGAAATA+TGG	+	chr5_1:10527730-10527749	None:intergenic	25.0%
!	CATATTTCAAAGTGAATTTG+TGG	-	chr5_1:10527728-10527747	Msa0716940:CDS	25.0%
!	GTATACATATATATAGATCG+AGG	-	chr5_1:10527793-10527812	Msa0716940:CDS	25.0%
!	TTGTTGGATTATTATTCTGT+TGG	+	chr5_1:10527911-10527930	None:intergenic	25.0%
!	TATATAATATACCTGCTGAA+GGG	+	chr5_1:10528427-10528446	None:intergenic	25.0%
!	ATATATAATATACCTGCTGA+AGG	+	chr5_1:10528428-10528447	None:intergenic	25.0%
!	GACATATATGAACAAAGAAA+AGG	+	chr5_1:10528781-10528800	None:intergenic	25.0%
!	ATAAAAAAAAGGGCTATTAG+AGG	-	chr5_1:10529013-10529032	Msa0716940:five_prime_UTR	25.0%
!!	AGAGGAATTTTGTATGATTA+TGG	-	chr5_1:10529161-10529180	Msa0716940:five_prime_UTR	25.0%
!	TGGGAATAATAGTTACAATA+TGG	-	chr5_1:10529193-10529212	Msa0716940:five_prime_UTR	25.0%
!	TTGATATGGATTTTCGTTCA+GGG	-	chr5_1:10527827-10527846	Msa0716940:intron	30.0%
!!!	ATGGCTGGTTTATTTTCATT+AGG	-	chr5_1:10527867-10527886	Msa0716940:intron	30.0%
	ATAATCCAACAACAGAATTC+TGG	-	chr5_1:10527919-10527938	Msa0716940:intron	30.0%
	TTATACCAGAATTCTGTTGT+TGG	+	chr5_1:10527927-10527946	None:intergenic	30.0%
!	AAAACAAGTGTTGTTGATGT+TGG	+	chr5_1:10528004-10528023	None:intergenic	30.0%
	AATAGATCTACTGTGTTTCT+GGG	-	chr5_1:10528122-10528141	Msa0716940:intron	30.0%
	GTATAAGTTGTCAAGATTGT+GGG	-	chr5_1:10528165-10528184	Msa0716940:intron	30.0%
!!	AGAACTTGTTGTAAAAGTAG+AGG	-	chr5_1:10528224-10528243	Msa0716940:intron	30.0%
!!	AAACTCATGTTAAGAGTACT+TGG	-	chr5_1:10528258-10528277	Msa0716940:intron	30.0%
!!	AACTCATGTTAAGAGTACTT+GGG	-	chr5_1:10528259-10528278	Msa0716940:intron	30.0%
!	CTTCTGAAAAAGATAAGTGA+AGG	-	chr5_1:10528538-10528557	Msa0716940:CDS	30.0%
	ATTCTCTTCCAAAACTTTCT+CGG	+	chr5_1:10528566-10528585	None:intergenic	30.0%
	CATTGAATAACTCATGTATC+TGG	+	chr5_1:10528851-10528870	None:intergenic	30.0%
	TATTCAACAGCTGTAAACAT+TGG	-	chr5_1:10529125-10529144	Msa0716940:five_prime_UTR	30.0%
	TAACTATTATTCCCATGATC+TGG	+	chr5_1:10529188-10529207	None:intergenic	30.0%
	AATAGTTACAATATGGCTAC+CGG	-	chr5_1:10529200-10529219	Msa0716940:five_prime_UTR	30.0%
	ACAGAAGAGATAAGGTTTAA+GGG	+	chr5_1:10529272-10529291	None:intergenic	30.0%
	GAATGATGAATCAAGATCTT+GGG	+	chr5_1:10529397-10529416	None:intergenic	30.0%
	TGAATGATGAATCAAGATCT+TGG	+	chr5_1:10529398-10529417	None:intergenic	30.0%
	ATTCAGAGCCTTAACAAATT+AGG	-	chr5_1:10529413-10529432	Msa0716940:five_prime_UTR	30.0%
!	TTGATATGGATTTTCGTTCA+GGG	-	chr5_1:10527827-10527846	Msa0716940:intron	30.0%
!!!	ATGGCTGGTTTATTTTCATT+AGG	-	chr5_1:10527867-10527886	Msa0716940:intron	30.0%
	ATAATCCAACAACAGAATTC+TGG	-	chr5_1:10527919-10527938	Msa0716940:intron	30.0%
	TTATACCAGAATTCTGTTGT+TGG	+	chr5_1:10527927-10527946	None:intergenic	30.0%
!	AAAACAAGTGTTGTTGATGT+TGG	+	chr5_1:10528004-10528023	None:intergenic	30.0%
	AATAGATCTACTGTGTTTCT+GGG	-	chr5_1:10528122-10528141	Msa0716940:intron	30.0%
	GTATAAGTTGTCAAGATTGT+GGG	-	chr5_1:10528165-10528184	Msa0716940:intron	30.0%
!!	AGAACTTGTTGTAAAAGTAG+AGG	-	chr5_1:10528224-10528243	Msa0716940:intron	30.0%
!!	AAACTCATGTTAAGAGTACT+TGG	-	chr5_1:10528258-10528277	Msa0716940:intron	30.0%
!!	AACTCATGTTAAGAGTACTT+GGG	-	chr5_1:10528259-10528278	Msa0716940:intron	30.0%
!	CTTCTGAAAAAGATAAGTGA+AGG	-	chr5_1:10528538-10528557	Msa0716940:CDS	30.0%
	ATTCTCTTCCAAAACTTTCT+CGG	+	chr5_1:10528566-10528585	None:intergenic	30.0%
	CATTGAATAACTCATGTATC+TGG	+	chr5_1:10528851-10528870	None:intergenic	30.0%
	TATTCAACAGCTGTAAACAT+TGG	-	chr5_1:10529125-10529144	Msa0716940:five_prime_UTR	30.0%
	TAACTATTATTCCCATGATC+TGG	+	chr5_1:10529188-10529207	None:intergenic	30.0%
	AATAGTTACAATATGGCTAC+CGG	-	chr5_1:10529200-10529219	Msa0716940:five_prime_UTR	30.0%
	ACAGAAGAGATAAGGTTTAA+GGG	+	chr5_1:10529272-10529291	None:intergenic	30.0%
	GAATGATGAATCAAGATCTT+GGG	+	chr5_1:10529397-10529416	None:intergenic	30.0%
	TGAATGATGAATCAAGATCT+TGG	+	chr5_1:10529398-10529417	None:intergenic	30.0%
	ATTCAGAGCCTTAACAAATT+AGG	-	chr5_1:10529413-10529432	Msa0716940:five_prime_UTR	30.0%
!	GAATTGAAGGTTTGGTTAGT+TGG	+	chr5_1:10527613-10527632	None:intergenic	35.0%
	AGGGTAAAGAATTGAAGGTT+TGG	+	chr5_1:10527621-10527640	None:intergenic	35.0%
	CTACTAGGGTAAAGAATTGA+AGG	+	chr5_1:10527626-10527645	None:intergenic	35.0%
!	CTTGATATGGATTTTCGTTC+AGG	-	chr5_1:10527826-10527845	Msa0716940:intron	35.0%
!	GGTTTGGAATAGTAGTAGTA+TGG	-	chr5_1:10527848-10527867	Msa0716940:intron	35.0%
!!	GTTGTTTCTAATTCATACCG+TGG	-	chr5_1:10527963-10527982	Msa0716940:intron	35.0%
	GAATAGATCTACTGTGTTTC+TGG	-	chr5_1:10528121-10528140	Msa0716940:intron	35.0%
	GGTATAAGTTGTCAAGATTG+TGG	-	chr5_1:10528164-10528183	Msa0716940:intron	35.0%
	CAAGTTCTACATCTCATATG+AGG	+	chr5_1:10528212-10528231	None:intergenic	35.0%
	CCATGTTGTTGAGATGATTT+AGG	+	chr5_1:10528332-10528351	None:intergenic	35.0%
	CCTAAATCATCTCAACAACA+TGG	-	chr5_1:10528329-10528348	Msa0716940:intron	35.0%
	TGTTGTTCTGACGAATGAAT+GGG	-	chr5_1:10528641-10528660	Msa0716940:CDS	35.0%
	AATGAATGGGATCAATGACA+GGG	-	chr5_1:10528654-10528673	Msa0716940:CDS	35.0%
!!	AAAGTAGTGTTGTTGGTTTG+TGG	+	chr5_1:10528747-10528766	None:intergenic	35.0%
	TATGATTATGGTCCAGATCA+TGG	-	chr5_1:10529173-10529192	Msa0716940:five_prime_UTR	35.0%
	ATGATTATGGTCCAGATCAT+GGG	-	chr5_1:10529174-10529193	Msa0716940:five_prime_UTR	35.0%
	GACAGAAGAGATAAGGTTTA+AGG	+	chr5_1:10529273-10529292	None:intergenic	35.0%
!	GAATTGAAGGTTTGGTTAGT+TGG	+	chr5_1:10527613-10527632	None:intergenic	35.0%
	AGGGTAAAGAATTGAAGGTT+TGG	+	chr5_1:10527621-10527640	None:intergenic	35.0%
	CTACTAGGGTAAAGAATTGA+AGG	+	chr5_1:10527626-10527645	None:intergenic	35.0%
!	CTTGATATGGATTTTCGTTC+AGG	-	chr5_1:10527826-10527845	Msa0716940:intron	35.0%
!	GGTTTGGAATAGTAGTAGTA+TGG	-	chr5_1:10527848-10527867	Msa0716940:intron	35.0%
!!	GTTGTTTCTAATTCATACCG+TGG	-	chr5_1:10527963-10527982	Msa0716940:intron	35.0%
	GAATAGATCTACTGTGTTTC+TGG	-	chr5_1:10528121-10528140	Msa0716940:intron	35.0%
	GGTATAAGTTGTCAAGATTG+TGG	-	chr5_1:10528164-10528183	Msa0716940:intron	35.0%
	CAAGTTCTACATCTCATATG+AGG	+	chr5_1:10528212-10528231	None:intergenic	35.0%
	CCATGTTGTTGAGATGATTT+AGG	+	chr5_1:10528332-10528351	None:intergenic	35.0%
	CCTAAATCATCTCAACAACA+TGG	-	chr5_1:10528329-10528348	Msa0716940:intron	35.0%
	TGTTGTTCTGACGAATGAAT+GGG	-	chr5_1:10528641-10528660	Msa0716940:CDS	35.0%
	AATGAATGGGATCAATGACA+GGG	-	chr5_1:10528654-10528673	Msa0716940:CDS	35.0%
!!	AAAGTAGTGTTGTTGGTTTG+TGG	+	chr5_1:10528747-10528766	None:intergenic	35.0%
	TATGATTATGGTCCAGATCA+TGG	-	chr5_1:10529173-10529192	Msa0716940:five_prime_UTR	35.0%
	ATGATTATGGTCCAGATCAT+GGG	-	chr5_1:10529174-10529193	Msa0716940:five_prime_UTR	35.0%
	GACAGAAGAGATAAGGTTTA+AGG	+	chr5_1:10529273-10529292	None:intergenic	35.0%
	ATTAGAGTGAGACAGAGAAG+TGG	-	chr5_1:10527476-10527495	Msa0716940:CDS	40.0%
	TTAGAGTGAGACAGAGAAGT+GGG	-	chr5_1:10527477-10527496	Msa0716940:CDS	40.0%
!	AAGGTTTGGTTAGTTGGTTG+AGG	+	chr5_1:10527607-10527626	None:intergenic	40.0%
!	ATGGATTTTCGTTCAGGGTT+TGG	-	chr5_1:10527832-10527851	Msa0716940:intron	40.0%
	TGGAATAGTAGTAGTATGGC+TGG	-	chr5_1:10527852-10527871	Msa0716940:intron	40.0%
!!!	CATACCGTGGTTTTGAGATT+TGG	-	chr5_1:10527976-10527995	Msa0716940:intron	40.0%
	GGTTCCAAATCTCAAAACCA+CGG	+	chr5_1:10527983-10528002	None:intergenic	40.0%
	CAACAAGATCTTTACTCCTC+TGG	-	chr5_1:10528053-10528072	Msa0716940:intron	40.0%
	TCAGAAGAACAAACCCTAGT+AGG	+	chr5_1:10528098-10528117	None:intergenic	40.0%
	TAAACGAGTGCAAGCTAAAG+AGG	+	chr5_1:10528381-10528400	None:intergenic	40.0%
!!!	TGAAGGTACCGAGAAAGTTT+TGG	-	chr5_1:10528555-10528574	Msa0716940:CDS	40.0%
!	TCGTCAGAACAACACTGTTT+TGG	+	chr5_1:10528635-10528654	None:intergenic	40.0%
!	GTGTTGTTCTGACGAATGAA+TGG	-	chr5_1:10528640-10528659	Msa0716940:CDS	40.0%
	GAATGAATGGGATCAATGAC+AGG	-	chr5_1:10528653-10528672	Msa0716940:CDS	40.0%
	AGCTGTGAAAGTAGTGTTGT+TGG	+	chr5_1:10528754-10528773	None:intergenic	40.0%
	TCAACAGCTGTAAACATTGG+AGG	-	chr5_1:10529128-10529147	Msa0716940:five_prime_UTR	40.0%
	CAACAGCTGTAAACATTGGA+GGG	-	chr5_1:10529129-10529148	Msa0716940:five_prime_UTR	40.0%
!!!	ATTGGAGGGCATGTTTTTAG+AGG	-	chr5_1:10529143-10529162	Msa0716940:five_prime_UTR	40.0%
!!	ACTAGAATTAGAGGCGTTTC+CGG	+	chr5_1:10529222-10529241	None:intergenic	40.0%
	GAGTGTACCACTAGAATTAG+AGG	+	chr5_1:10529231-10529250	None:intergenic	40.0%
	ATGAAGGAATTAAGTGGAGC+TGG	+	chr5_1:10529344-10529363	None:intergenic	40.0%
!	GAAGGCATGAAGGAATTAAG+TGG	+	chr5_1:10529350-10529369	None:intergenic	40.0%
	AATTCCTTCATGCCTTCTAG+TGG	-	chr5_1:10529353-10529372	Msa0716940:five_prime_UTR	40.0%
	AAGAATTGCGTACCACTAGA+AGG	+	chr5_1:10529368-10529387	None:intergenic	40.0%
	ATGAATCAAGATCTTGGGTG+GGG	+	chr5_1:10529392-10529411	None:intergenic	40.0%
	GATGAATCAAGATCTTGGGT+GGG	+	chr5_1:10529393-10529412	None:intergenic	40.0%
	TGATGAATCAAGATCTTGGG+TGG	+	chr5_1:10529394-10529413	None:intergenic	40.0%
	ATTAGAGTGAGACAGAGAAG+TGG	-	chr5_1:10527476-10527495	Msa0716940:CDS	40.0%
	TTAGAGTGAGACAGAGAAGT+GGG	-	chr5_1:10527477-10527496	Msa0716940:CDS	40.0%
!	AAGGTTTGGTTAGTTGGTTG+AGG	+	chr5_1:10527607-10527626	None:intergenic	40.0%
!	ATGGATTTTCGTTCAGGGTT+TGG	-	chr5_1:10527832-10527851	Msa0716940:intron	40.0%
	TGGAATAGTAGTAGTATGGC+TGG	-	chr5_1:10527852-10527871	Msa0716940:intron	40.0%
!!!	CATACCGTGGTTTTGAGATT+TGG	-	chr5_1:10527976-10527995	Msa0716940:intron	40.0%
	GGTTCCAAATCTCAAAACCA+CGG	+	chr5_1:10527983-10528002	None:intergenic	40.0%
	CAACAAGATCTTTACTCCTC+TGG	-	chr5_1:10528053-10528072	Msa0716940:intron	40.0%
	TCAGAAGAACAAACCCTAGT+AGG	+	chr5_1:10528098-10528117	None:intergenic	40.0%
	TAAACGAGTGCAAGCTAAAG+AGG	+	chr5_1:10528381-10528400	None:intergenic	40.0%
!!!	TGAAGGTACCGAGAAAGTTT+TGG	-	chr5_1:10528555-10528574	Msa0716940:CDS	40.0%
!	TCGTCAGAACAACACTGTTT+TGG	+	chr5_1:10528635-10528654	None:intergenic	40.0%
!	GTGTTGTTCTGACGAATGAA+TGG	-	chr5_1:10528640-10528659	Msa0716940:CDS	40.0%
	GAATGAATGGGATCAATGAC+AGG	-	chr5_1:10528653-10528672	Msa0716940:CDS	40.0%
	AGCTGTGAAAGTAGTGTTGT+TGG	+	chr5_1:10528754-10528773	None:intergenic	40.0%
	TCAACAGCTGTAAACATTGG+AGG	-	chr5_1:10529128-10529147	Msa0716940:five_prime_UTR	40.0%
	CAACAGCTGTAAACATTGGA+GGG	-	chr5_1:10529129-10529148	Msa0716940:five_prime_UTR	40.0%
!!!	ATTGGAGGGCATGTTTTTAG+AGG	-	chr5_1:10529143-10529162	Msa0716940:five_prime_UTR	40.0%
!!	ACTAGAATTAGAGGCGTTTC+CGG	+	chr5_1:10529222-10529241	None:intergenic	40.0%
	GAGTGTACCACTAGAATTAG+AGG	+	chr5_1:10529231-10529250	None:intergenic	40.0%
	ATGAAGGAATTAAGTGGAGC+TGG	+	chr5_1:10529344-10529363	None:intergenic	40.0%
!	GAAGGCATGAAGGAATTAAG+TGG	+	chr5_1:10529350-10529369	None:intergenic	40.0%
	AATTCCTTCATGCCTTCTAG+TGG	-	chr5_1:10529353-10529372	Msa0716940:five_prime_UTR	40.0%
	AAGAATTGCGTACCACTAGA+AGG	+	chr5_1:10529368-10529387	None:intergenic	40.0%
	ATGAATCAAGATCTTGGGTG+GGG	+	chr5_1:10529392-10529411	None:intergenic	40.0%
	GATGAATCAAGATCTTGGGT+GGG	+	chr5_1:10529393-10529412	None:intergenic	40.0%
	TGATGAATCAAGATCTTGGG+TGG	+	chr5_1:10529394-10529413	None:intergenic	40.0%
!!	TACTCCTCTGGTGTTGTGTT+AGG	-	chr5_1:10528065-10528084	Msa0716940:intron	45.0%
!!	TCTGGTGTTGTGTTAGGAGT+GGG	-	chr5_1:10528071-10528090	Msa0716940:intron	45.0%
!!	TCTACTGTGTTTCTGGGAAG+TGG	-	chr5_1:10528128-10528147	Msa0716940:intron	45.0%
	CTTTCTCTTCTTCTAGCAGC+AGG	+	chr5_1:10528287-10528306	None:intergenic	45.0%
	AGAGTGAGTGAAGGGTTTGT+AGG	+	chr5_1:10528404-10528423	None:intergenic	45.0%
!	TGTGGAAGAGTGAGTGTTGT+TGG	+	chr5_1:10528729-10528748	None:intergenic	45.0%
!	GGAGATGAATTTTCCAGCTG+TGG	-	chr5_1:10529034-10529053	Msa0716940:five_prime_UTR	45.0%
	TGAATTCTCCAGCAGAGTTC+AGG	-	chr5_1:10529057-10529076	Msa0716940:five_prime_UTR	45.0%
!!	CTCAGTTGATGAGAACGAAG+AGG	-	chr5_1:10529094-10529113	Msa0716940:five_prime_UTR	45.0%
	GGAAACGCCTCTAATTCTAG+TGG	-	chr5_1:10529221-10529240	Msa0716940:five_prime_UTR	45.0%
	TCTAGTGGTACACTCCTTGA+AGG	-	chr5_1:10529236-10529255	Msa0716940:five_prime_UTR	45.0%
	CTAGTGGTACACTCCTTGAA+GGG	-	chr5_1:10529237-10529256	Msa0716940:five_prime_UTR	45.0%
	TAGTGGTACACTCCTTGAAG+GGG	-	chr5_1:10529238-10529257	Msa0716940:five_prime_UTR	45.0%
	CATCAGGGACAGAAGAGATA+AGG	+	chr5_1:10529280-10529299	None:intergenic	45.0%
	GGAGCTGGATACAAAGAAGA+AGG	+	chr5_1:10529329-10529348	None:intergenic	45.0%
	TGAATCAAGATCTTGGGTGG+GGG	+	chr5_1:10529391-10529410	None:intergenic	45.0%
!!	TACTCCTCTGGTGTTGTGTT+AGG	-	chr5_1:10528065-10528084	Msa0716940:intron	45.0%
!!	TCTGGTGTTGTGTTAGGAGT+GGG	-	chr5_1:10528071-10528090	Msa0716940:intron	45.0%
!!	TCTACTGTGTTTCTGGGAAG+TGG	-	chr5_1:10528128-10528147	Msa0716940:intron	45.0%
	CTTTCTCTTCTTCTAGCAGC+AGG	+	chr5_1:10528287-10528306	None:intergenic	45.0%
	AGAGTGAGTGAAGGGTTTGT+AGG	+	chr5_1:10528404-10528423	None:intergenic	45.0%
!	TGTGGAAGAGTGAGTGTTGT+TGG	+	chr5_1:10528729-10528748	None:intergenic	45.0%
!	GGAGATGAATTTTCCAGCTG+TGG	-	chr5_1:10529034-10529053	Msa0716940:five_prime_UTR	45.0%
	TGAATTCTCCAGCAGAGTTC+AGG	-	chr5_1:10529057-10529076	Msa0716940:five_prime_UTR	45.0%
!!	CTCAGTTGATGAGAACGAAG+AGG	-	chr5_1:10529094-10529113	Msa0716940:five_prime_UTR	45.0%
	GGAAACGCCTCTAATTCTAG+TGG	-	chr5_1:10529221-10529240	Msa0716940:five_prime_UTR	45.0%
	TCTAGTGGTACACTCCTTGA+AGG	-	chr5_1:10529236-10529255	Msa0716940:five_prime_UTR	45.0%
	CTAGTGGTACACTCCTTGAA+GGG	-	chr5_1:10529237-10529256	Msa0716940:five_prime_UTR	45.0%
	TAGTGGTACACTCCTTGAAG+GGG	-	chr5_1:10529238-10529257	Msa0716940:five_prime_UTR	45.0%
	CATCAGGGACAGAAGAGATA+AGG	+	chr5_1:10529280-10529299	None:intergenic	45.0%
	GGAGCTGGATACAAAGAAGA+AGG	+	chr5_1:10529329-10529348	None:intergenic	45.0%
	TGAATCAAGATCTTGGGTGG+GGG	+	chr5_1:10529391-10529410	None:intergenic	45.0%
	CACTCCTAACACAACACCAG+AGG	+	chr5_1:10528072-10528091	None:intergenic	50.0%
!!	CTCTGGTGTTGTGTTAGGAG+TGG	-	chr5_1:10528070-10528089	Msa0716940:intron	50.0%
	TGTTAGGAGTGGGACCTACT+AGG	-	chr5_1:10528081-10528100	Msa0716940:intron	50.0%
	GTTAGGAGTGGGACCTACTA+GGG	-	chr5_1:10528082-10528101	Msa0716940:intron	50.0%
!!	GTGTTTCTGGGAAGTGGAAG+TGG	-	chr5_1:10528134-10528153	Msa0716940:intron	50.0%
	CTGAAGGGAGAGTGAGTGAA+GGG	+	chr5_1:10528412-10528431	None:intergenic	50.0%
	TCCCTGATGCTACTGCTGTT+GGG	-	chr5_1:10529291-10529310	Msa0716940:five_prime_UTR	50.0%
!	CGTACCACTAGAAGGCATGA+AGG	+	chr5_1:10529360-10529379	None:intergenic	50.0%
	CACTCCTAACACAACACCAG+AGG	+	chr5_1:10528072-10528091	None:intergenic	50.0%
!!	CTCTGGTGTTGTGTTAGGAG+TGG	-	chr5_1:10528070-10528089	Msa0716940:intron	50.0%
	TGTTAGGAGTGGGACCTACT+AGG	-	chr5_1:10528081-10528100	Msa0716940:intron	50.0%
	GTTAGGAGTGGGACCTACTA+GGG	-	chr5_1:10528082-10528101	Msa0716940:intron	50.0%
!!	GTGTTTCTGGGAAGTGGAAG+TGG	-	chr5_1:10528134-10528153	Msa0716940:intron	50.0%
	CTGAAGGGAGAGTGAGTGAA+GGG	+	chr5_1:10528412-10528431	None:intergenic	50.0%
	TCCCTGATGCTACTGCTGTT+GGG	-	chr5_1:10529291-10529310	Msa0716940:five_prime_UTR	50.0%
!	CGTACCACTAGAAGGCATGA+AGG	+	chr5_1:10529360-10529379	None:intergenic	50.0%
	CTGGGAAGTGGAAGTGGAAG+TGG	-	chr5_1:10528140-10528159	Msa0716940:intron	55.0%
	GGAAGTGGAAGTGGAAGTGG+AGG	-	chr5_1:10528143-10528162	Msa0716940:intron	55.0%
	GCTGAAGGGAGAGTGAGTGA+AGG	+	chr5_1:10528413-10528432	None:intergenic	55.0%
	TCACTCACTCTCCCTTCAGC+AGG	-	chr5_1:10528413-10528432	Msa0716940:intron	55.0%
	GCTGGAGAATTCACCACAGC+TGG	+	chr5_1:10529050-10529069	None:intergenic	55.0%
	TGGTACACTCCTTGAAGGGG+TGG	-	chr5_1:10529241-10529260	Msa0716940:five_prime_UTR	55.0%
	GTCCCTGATGCTACTGCTGT+TGG	-	chr5_1:10529290-10529309	Msa0716940:five_prime_UTR	55.0%
	CCCCAACAGCAGTAGCATCA+GGG	+	chr5_1:10529295-10529314	None:intergenic	55.0%
	CCCTGATGCTACTGCTGTTG+GGG	-	chr5_1:10529292-10529311	Msa0716940:five_prime_UTR	55.0%
	TCCCCAACAGCAGTAGCATC+AGG	+	chr5_1:10529296-10529315	None:intergenic	55.0%
	CTGGGAAGTGGAAGTGGAAG+TGG	-	chr5_1:10528140-10528159	Msa0716940:intron	55.0%
	GGAAGTGGAAGTGGAAGTGG+AGG	-	chr5_1:10528143-10528162	Msa0716940:intron	55.0%
	GCTGAAGGGAGAGTGAGTGA+AGG	+	chr5_1:10528413-10528432	None:intergenic	55.0%
	TCACTCACTCTCCCTTCAGC+AGG	-	chr5_1:10528413-10528432	Msa0716940:intron	55.0%
	GCTGGAGAATTCACCACAGC+TGG	+	chr5_1:10529050-10529069	None:intergenic	55.0%
	TGGTACACTCCTTGAAGGGG+TGG	-	chr5_1:10529241-10529260	Msa0716940:five_prime_UTR	55.0%
	GTCCCTGATGCTACTGCTGT+TGG	-	chr5_1:10529290-10529309	Msa0716940:five_prime_UTR	55.0%
	CCCCAACAGCAGTAGCATCA+GGG	+	chr5_1:10529295-10529314	None:intergenic	55.0%
	CCCTGATGCTACTGCTGTTG+GGG	-	chr5_1:10529292-10529311	Msa0716940:five_prime_UTR	55.0%
	TCCCCAACAGCAGTAGCATC+AGG	+	chr5_1:10529296-10529315	None:intergenic	55.0%
	GTGAGACAGAGAAGTGGGCG+TGG	-	chr5_1:10527482-10527501	Msa0716940:CDS	60.0%
	AGACAGAGAAGTGGGCGTGG+CGG	-	chr5_1:10527485-10527504	Msa0716940:CDS	60.0%
	TGTTGCTGCTGCTGCTGCTG+AGG	+	chr5_1:10528038-10528057	None:intergenic	60.0%
	CTCACGCACCTGAACTCTGC+TGG	+	chr5_1:10529068-10529087	None:intergenic	60.0%
	GTGAGACAGAGAAGTGGGCG+TGG	-	chr5_1:10527482-10527501	Msa0716940:CDS	60.0%
	AGACAGAGAAGTGGGCGTGG+CGG	-	chr5_1:10527485-10527504	Msa0716940:CDS	60.0%
	TGTTGCTGCTGCTGCTGCTG+AGG	+	chr5_1:10528038-10528057	None:intergenic	60.0%
	CTCACGCACCTGAACTCTGC+TGG	+	chr5_1:10529068-10529087	None:intergenic	60.0%
	AGGGCTGAGCCACCCCTTCA+AGG	+	chr5_1:10529253-10529272	None:intergenic	65.0%
	AGGGCTGAGCCACCCCTTCA+AGG	+	chr5_1:10529253-10529272	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_1	gene	10527366	10529495	10527366	ID=Msa0716940;Name=Msa0716940
chr5_1	mRNA	10527366	10529495	10527366	ID=Msa0716940-mRNA-1;Parent=Msa0716940;Name=Msa0716940-mRNA-1;_AED=0.00;_eAED=0.00;_QI=501\|1\|1\|1\|1\|1\|2\|89\|316
chr5_1	exon	10527366	10527837	10527366	ID=Msa0716940-mRNA-1:exon:4286;Parent=Msa0716940-mRNA-1
chr5_1	exon	10528427	10529495	10528427	ID=Msa0716940-mRNA-1:exon:4285;Parent=Msa0716940-mRNA-1
chr5_1	five_prime_UTR	10528995	10529495	10528995	ID=Msa0716940-mRNA-1:five_prime_utr;Parent=Msa0716940-mRNA-1
chr5_1	CDS	10528427	10528994	10528427	ID=Msa0716940-mRNA-1:cds;Parent=Msa0716940-mRNA-1
chr5_1	CDS	10527455	10527837	10527455	ID=Msa0716940-mRNA-1:cds;Parent=Msa0716940-mRNA-1
chr5_1	three_prime_UTR	10527366	10527454	10527366	ID=Msa0716940-mRNA-1:three_prime_utr;Parent=Msa0716940-mRNA-1

Gene Sequence

>Msa0716940

ATGGCTGGTTTATTTTCATTAGGAAGAACTGAAGAAGAAAACCAACAGAATAATAATCCAACAACAGAATTCTGGTATAATAAGAATGATGATTCTGTTGTTTCTAATTCATACCGTGGTTTTGAGATTTGGAACCAACATCAACAACACTTGTTTTCTTTACAACAACCTCAGCAGCAGCAGCAGCAACAAGATCTTTACTCCTCTGGTGTTGTGTTAGGAGTGGGACCTACTAGGGTTTGTTCTTCTGATGAGAATAGATCTACTGTGTTTCTGGGAAGTGGAAGTGGAAGTGGAGGTATAAGTTGTCAAGATTGTGGGAATCAAGCTAAGAAAGATTGTCCTCATATGAGATGTAGAACTTGTTGTAAAAGTAGAGGTTTTGATTGTCAAACTCATGTTAAGAGTACTTGGGTTCCTGCTGCTAGAAGAAGAGAAAGACAACAACAACAACTTTCTGCTCCTAAATCATCTCAACAACATGGAGAGAGAGATCTTAACAATAACAATTCCTCTTTAGCTTGCACTCGTTTACCTACAAACCCTTCACTCACTCTCCCTTCAGCAGGGCTATTAGAGGAGATGAATTTTCCAGCTGTGGTGAATTCTCCAGCAGAGTTCAGGTGCGTGAGAGTTAGCTCAGTTGATGAGAACGAAGAGGAGTATGCATATTCAACAGCTGTAAACATTGGAGGGCATGTTTTTAGAGGAATTTTGTATGATTATGGTCCAGATCATGGGAATAATAGTTACAATATGGCTACCGGAAACGCCTCTAATTCTAGTGGTACACTCCTTGAAGGGGTGGCTCAGCCCTTAAACCTTATCTCTTCTGTCCCTGATGCTACTGCTGTTGGGGAAATTGTTGATCCTTCTTCTTTGTATCCAGCTCCACTTAATTCCTTCATGCCTTCTAGTGGTACGCAATTCTTCCCCCACCCAAGATCTTGA

Protein sequence

>Msa0716940

MAGLFSLGRTEEENQQNNNPTTEFWYNKNDDSVVSNSYRGFEIWNQHQQHLFSLQQPQQQQQQQDLYSSGVVLGVGPTRVCSSDENRSTVFLGSGSGSGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAARRRERQQQQLSAPKSSQQHGERDLNNNNSSLACTRLPTNPSLTLPSAGLLEEMNFPAVVNSPAEFRCVRVSSVDENEEEYAYSTAVNIGGHVFRGILYDYGPDHGNNSYNMATGNASNSSGTLLEGVAQPLNLISSVPDATAVGEIVDPSSLYPAPLNSFMPSSGTQFFPHPRS*