Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717120 | XP_013453542.1 | 99.138 | 232 | 2 | 0 | 1 | 232 | 1 | 232 | 4.55e-170 | 477 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717120 | sp|Q003J2|TM6_VITVI | 65.948 | 232 | 72 | 4 | 1 | 232 | 1 | 225 | 3.80e-100 | 293 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717120 | A0A072UCQ0 | 99.138 | 232 | 2 | 0 | 1 | 232 | 1 | 232 | 2.17e-170 | 477 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0717120 | TF | MADS-MIKC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0717120 | Msa0758190 | 0.864061 | 1.593980e-64 | -8.615850e-47 |
| Msa0717120 | Msa0837810 | 0.886023 | 4.905951e-72 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717120 | MtrunA17_Chr5g0404951 | 98.707 | 232 | 2 | 1 | 1 | 232 | 1 | 231 | 2.10e-171 | 471 |
| Msa0717120 | MtrunA17_Chr3g0142191 | 53.846 | 221 | 95 | 5 | 1 | 220 | 1 | 215 | 2.59e-74 | 224 |
| Msa0717120 | MtrunA17_Chr3g0125241 | 47.260 | 146 | 73 | 2 | 1 | 146 | 26 | 167 | 2.02e-40 | 137 |
| Msa0717120 | MtrunA17_Chr1g0159661 | 43.919 | 148 | 79 | 2 | 1 | 148 | 1 | 144 | 2.74e-35 | 123 |
| Msa0717120 | MtrunA17_Chr7g0220121 | 34.234 | 222 | 111 | 8 | 1 | 208 | 1 | 201 | 3.05e-31 | 115 |
| Msa0717120 | MtrunA17_Chr8g0351051 | 38.333 | 180 | 96 | 4 | 1 | 173 | 1 | 172 | 3.09e-31 | 115 |
| Msa0717120 | MtrunA17_Chr3g0077501 | 40.556 | 180 | 90 | 5 | 1 | 173 | 1 | 170 | 7.81e-30 | 110 |
| Msa0717120 | MtrunA17_Chr1g0164791 | 36.000 | 175 | 102 | 2 | 1 | 168 | 1 | 172 | 2.70e-29 | 109 |
| Msa0717120 | MtrunA17_Chr8g0380021 | 40.000 | 180 | 91 | 5 | 1 | 173 | 17 | 186 | 2.88e-29 | 110 |
| Msa0717120 | MtrunA17_Chr3g0097101 | 38.122 | 181 | 97 | 4 | 1 | 174 | 16 | 188 | 4.49e-29 | 109 |
| Msa0717120 | MtrunA17_Chr4g0057151 | 36.082 | 194 | 112 | 4 | 1 | 187 | 1 | 189 | 1.97e-28 | 106 |
| Msa0717120 | MtrunA17_Chr4g0061691 | 38.674 | 181 | 85 | 6 | 1 | 168 | 1 | 168 | 2.23e-28 | 107 |
| Msa0717120 | MtrunA17_Chr5g0420081 | 36.559 | 186 | 96 | 6 | 1 | 175 | 1 | 175 | 2.49e-28 | 107 |
| Msa0717120 | MtrunA17_Chr6g0474371 | 37.572 | 173 | 99 | 3 | 1 | 168 | 1 | 169 | 2.92e-28 | 105 |
| Msa0717120 | MtrunA17_Chr5g0420091 | 40.000 | 170 | 93 | 5 | 1 | 165 | 1 | 166 | 3.53e-28 | 106 |
| Msa0717120 | MtrunA17_Chr7g0220111 | 38.122 | 181 | 97 | 5 | 1 | 174 | 1 | 173 | 4.52e-28 | 107 |
| Msa0717120 | MtrunA17_Chr8g0366231 | 36.872 | 179 | 91 | 6 | 1 | 168 | 1 | 168 | 5.36e-28 | 106 |
| Msa0717120 | MtrunA17_Chr2g0284911 | 39.444 | 180 | 92 | 5 | 1 | 173 | 16 | 185 | 5.77e-28 | 107 |
| Msa0717120 | MtrunA17_Chr8g0351041 | 37.500 | 176 | 80 | 4 | 1 | 161 | 1 | 161 | 8.13e-28 | 103 |
| Msa0717120 | MtrunA17_Chr8g0351031 | 36.066 | 183 | 87 | 4 | 1 | 168 | 1 | 168 | 9.36e-28 | 105 |
| Msa0717120 | MtrunA17_Chr6g0455511 | 37.912 | 182 | 96 | 6 | 1 | 174 | 1 | 173 | 1.63e-27 | 105 |
| Msa0717120 | MtrunA17_Chr2g0279821 | 36.306 | 157 | 78 | 4 | 1 | 147 | 1 | 145 | 3.75e-26 | 101 |
| Msa0717120 | MtrunA17_Chr3g0122251 | 38.961 | 154 | 83 | 3 | 1 | 147 | 1 | 150 | 5.54e-26 | 101 |
| Msa0717120 | MtrunA17_Chr7g0246431 | 36.994 | 173 | 98 | 4 | 1 | 168 | 1 | 167 | 8.55e-26 | 100 |
| Msa0717120 | MtrunA17_Chr4g0049541 | 35.393 | 178 | 93 | 3 | 1 | 168 | 1 | 166 | 9.17e-26 | 100 |
| Msa0717120 | MtrunA17_Chr1g0204111 | 36.782 | 174 | 98 | 4 | 1 | 168 | 17 | 184 | 1.54e-25 | 100 |
| Msa0717120 | MtrunA17_Chr4g0018421 | 34.706 | 170 | 102 | 3 | 1 | 165 | 1 | 166 | 2.55e-23 | 93.2 |
| Msa0717120 | MtrunA17_Chr5g0411691 | 35.897 | 156 | 79 | 5 | 1 | 147 | 1 | 144 | 1.41e-22 | 92.0 |
| Msa0717120 | MtrunA17_Chr2g0308251 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 5.59e-22 | 86.3 |
| Msa0717120 | MtrunA17_Chr4g0020221 | 36.301 | 146 | 88 | 2 | 1 | 143 | 1 | 144 | 6.41e-22 | 90.9 |
| Msa0717120 | MtrunA17_Chr5g0412461 | 37.288 | 177 | 92 | 6 | 1 | 168 | 1 | 167 | 7.06e-22 | 90.1 |
| Msa0717120 | MtrunA17_Chr5g0427401 | 37.143 | 175 | 93 | 5 | 1 | 168 | 1 | 165 | 7.38e-22 | 90.1 |
| Msa0717120 | MtrunA17_Chr1g0173161 | 64.516 | 62 | 22 | 0 | 1 | 62 | 1 | 62 | 8.69e-22 | 85.9 |
| Msa0717120 | MtrunA17_Chr8g0377561 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 1.21e-21 | 85.9 |
| Msa0717120 | MtrunA17_Chr4g0061671 | 54.795 | 73 | 32 | 1 | 1 | 73 | 1 | 72 | 1.80e-21 | 88.2 |
| Msa0717120 | MtrunA17_Chr7g0246381 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 1.91e-21 | 84.7 |
| Msa0717120 | MtrunA17_Chr5g0412271 | 35.176 | 199 | 116 | 6 | 1 | 194 | 1 | 191 | 3.66e-21 | 88.2 |
| Msa0717120 | MtrunA17_Chr4g0044071 | 64.912 | 57 | 20 | 0 | 1 | 57 | 1 | 57 | 2.19e-20 | 83.2 |
| Msa0717120 | MtrunA17_Chr5g0425191 | 63.158 | 57 | 21 | 0 | 1 | 57 | 1 | 57 | 7.64e-20 | 81.3 |
| Msa0717120 | MtrunA17_Chr4g0049901 | 34.104 | 173 | 105 | 4 | 1 | 168 | 27 | 195 | 3.96e-19 | 83.2 |
| Msa0717120 | MtrunA17_Chr5g0427921 | 55.932 | 59 | 26 | 0 | 1 | 59 | 1 | 59 | 1.43e-18 | 76.6 |
| Msa0717120 | MtrunA17_Chr1g0169761 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 1.69e-18 | 80.1 |
| Msa0717120 | MtrunA17_Chr8g0376821 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 2.17e-18 | 79.7 |
| Msa0717120 | MtrunA17_Chr4g0074101 | 48.438 | 64 | 33 | 0 | 1 | 64 | 1 | 64 | 4.59e-18 | 79.3 |
| Msa0717120 | MtrunA17_Chr3g0134451 | 49.485 | 97 | 46 | 3 | 1 | 96 | 1 | 95 | 1.76e-17 | 79.7 |
| Msa0717120 | MtrunA17_Chr1g0180591 | 37.008 | 127 | 70 | 4 | 1 | 124 | 1 | 120 | 8.76e-17 | 75.5 |
| Msa0717120 | MtrunA17_Chr8g0356071 | 50.000 | 62 | 31 | 0 | 1 | 62 | 1 | 62 | 2.01e-16 | 73.9 |
| Msa0717120 | MtrunA17_Chr8g0357771 | 48.387 | 62 | 32 | 0 | 1 | 62 | 1 | 62 | 6.17e-16 | 73.2 |
| Msa0717120 | MtrunA17_Chr8g0379021 | 50.000 | 70 | 33 | 1 | 2 | 71 | 12 | 79 | 9.64e-16 | 72.4 |
| Msa0717120 | MtrunA17_Chr3g0099421 | 54.286 | 70 | 30 | 1 | 2 | 71 | 34 | 101 | 1.09e-15 | 73.9 |
| Msa0717120 | MtrunA17_Chr2g0333981 | 35.461 | 141 | 71 | 4 | 1 | 125 | 11 | 147 | 1.50e-15 | 72.0 |
| Msa0717120 | MtrunA17_Chr8g0355091 | 50.000 | 70 | 33 | 1 | 2 | 71 | 9 | 76 | 1.58e-15 | 73.2 |
| Msa0717120 | MtrunA17_Chr1g0206701 | 50.000 | 70 | 33 | 1 | 2 | 71 | 9 | 76 | 1.85e-15 | 73.2 |
| Msa0717120 | MtrunA17_Chr1g0149391 | 51.429 | 70 | 32 | 1 | 2 | 71 | 9 | 76 | 1.87e-15 | 73.2 |
| Msa0717120 | MtrunA17_Chr5g0419601 | 50.704 | 71 | 33 | 1 | 1 | 71 | 8 | 76 | 2.07e-15 | 72.8 |
| Msa0717120 | MtrunA17_Chr1g0206721 | 40.187 | 107 | 56 | 3 | 2 | 102 | 9 | 113 | 2.07e-15 | 72.8 |
| Msa0717120 | MtrunA17_Chr4g0052081 | 45.070 | 71 | 37 | 1 | 1 | 71 | 1 | 69 | 2.41e-15 | 71.6 |
| Msa0717120 | MtrunA17_Chr2g0292791 | 51.429 | 70 | 32 | 1 | 2 | 71 | 9 | 76 | 2.41e-15 | 72.8 |
| Msa0717120 | MtrunA17_Chr3g0089141 | 50.000 | 70 | 33 | 1 | 2 | 71 | 9 | 76 | 3.40e-15 | 72.0 |
| Msa0717120 | MtrunA17_Chr2g0317481 | 50.000 | 70 | 33 | 1 | 2 | 71 | 9 | 76 | 3.40e-15 | 72.4 |
| Msa0717120 | MtrunA17_Chr1g0208561 | 50.000 | 70 | 33 | 1 | 2 | 71 | 9 | 76 | 3.43e-15 | 72.0 |
| Msa0717120 | MtrunA17_Chr4g0052061 | 50.000 | 60 | 30 | 0 | 1 | 60 | 1 | 60 | 3.46e-15 | 70.5 |
| Msa0717120 | MtrunA17_Chr2g0317451 | 50.000 | 70 | 33 | 1 | 2 | 71 | 9 | 76 | 3.61e-15 | 72.0 |
| Msa0717120 | MtrunA17_Chr1g0166611 | 42.857 | 91 | 44 | 3 | 13 | 96 | 17 | 106 | 3.88e-15 | 69.7 |
| Msa0717120 | MtrunA17_Chr3g0099411 | 37.815 | 119 | 60 | 3 | 2 | 108 | 9 | 125 | 4.10e-15 | 71.6 |
| Msa0717120 | MtrunA17_Chr1g0187361 | 50.000 | 70 | 33 | 1 | 2 | 71 | 9 | 76 | 4.25e-15 | 72.0 |
| Msa0717120 | MtrunA17_Chr1g0175611 | 48.387 | 62 | 32 | 0 | 1 | 62 | 1 | 62 | 4.40e-15 | 70.5 |
| Msa0717120 | MtrunA17_Chr1g0188671 | 51.429 | 70 | 32 | 1 | 2 | 71 | 47 | 114 | 5.60e-15 | 72.4 |
| Msa0717120 | MtrunA17_Chr1g0206991 | 39.252 | 107 | 57 | 3 | 2 | 102 | 9 | 113 | 6.69e-15 | 70.5 |
| Msa0717120 | MtrunA17_Chr1g0208581 | 50.000 | 70 | 33 | 1 | 2 | 71 | 9 | 76 | 1.73e-14 | 70.1 |
| Msa0717120 | MtrunA17_Chr2g0325971 | 48.571 | 70 | 34 | 1 | 2 | 71 | 9 | 76 | 3.54e-14 | 69.3 |
| Msa0717120 | MtrunA17_Chr5g0422421 | 50.000 | 70 | 33 | 1 | 2 | 71 | 9 | 76 | 3.66e-14 | 69.3 |
| Msa0717120 | MtrunA17_Chr1g0175601 | 46.774 | 62 | 33 | 0 | 1 | 62 | 1 | 62 | 3.79e-14 | 68.2 |
| Msa0717120 | MtrunA17_Chr5g0417661 | 51.515 | 66 | 26 | 1 | 1 | 66 | 56 | 115 | 3.94e-14 | 67.0 |
| Msa0717120 | MtrunA17_Chr5g0422941 | 48.571 | 70 | 34 | 1 | 2 | 71 | 9 | 76 | 4.13e-14 | 69.3 |
| Msa0717120 | MtrunA17_Chr4g0060841 | 37.063 | 143 | 80 | 6 | 1 | 142 | 1 | 134 | 5.71e-14 | 70.1 |
| Msa0717120 | MtrunA17_Chr6g0457851 | 29.375 | 160 | 96 | 5 | 1 | 148 | 11 | 165 | 8.22e-14 | 69.7 |
| Msa0717120 | MtrunA17_Chr4g0018951 | 36.923 | 130 | 62 | 5 | 15 | 132 | 25 | 146 | 1.03e-13 | 67.0 |
| Msa0717120 | MtrunA17_Chr3g0089151 | 45.714 | 70 | 36 | 1 | 2 | 71 | 9 | 76 | 1.07e-12 | 63.2 |
| Msa0717120 | MtrunA17_Chr2g0300441 | 47.222 | 72 | 34 | 2 | 2 | 71 | 7 | 76 | 2.29e-12 | 64.3 |
| Msa0717120 | MtrunA17_Chr3g0119901 | 43.662 | 71 | 38 | 1 | 1 | 71 | 8 | 76 | 2.35e-12 | 63.9 |
| Msa0717120 | MtrunA17_Chr6g0449851 | 30.822 | 146 | 89 | 4 | 1 | 136 | 1 | 144 | 4.57e-12 | 64.3 |
| Msa0717120 | MtrunA17_Chr2g0300421 | 46.032 | 63 | 34 | 0 | 2 | 64 | 9 | 71 | 7.19e-12 | 62.0 |
| Msa0717120 | MtrunA17_Chr1g0206691 | 36.735 | 98 | 54 | 3 | 11 | 102 | 1 | 96 | 1.45e-11 | 62.0 |
| Msa0717120 | MtrunA17_Chr3g0111841 | 47.368 | 57 | 30 | 0 | 8 | 64 | 2 | 58 | 1.73e-11 | 58.2 |
| Msa0717120 | MtrunA17_Chr3g0085241 | 40.845 | 71 | 40 | 1 | 1 | 71 | 40 | 108 | 3.15e-11 | 61.2 |
| Msa0717120 | MtrunA17_Chr1g0187351 | 45.902 | 61 | 31 | 1 | 11 | 71 | 1 | 59 | 3.91e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0717120 | AT3G54340.1 | 48.182 | 220 | 110 | 2 | 1 | 220 | 1 | 216 | 1.46e-64 | 200 |
| Msa0717120 | AT5G20240.2 | 43.972 | 141 | 75 | 2 | 1 | 141 | 1 | 137 | 1.12e-33 | 119 |
| Msa0717120 | AT5G20240.1 | 41.333 | 150 | 84 | 2 | 1 | 150 | 1 | 146 | 1.63e-33 | 120 |
| Msa0717120 | AT2G42830.2 | 36.453 | 203 | 104 | 5 | 1 | 186 | 16 | 210 | 7.36e-32 | 117 |
| Msa0717120 | AT5G60910.1 | 41.341 | 179 | 97 | 4 | 1 | 175 | 1 | 175 | 9.78e-32 | 116 |
| Msa0717120 | AT4G11880.2 | 41.818 | 165 | 81 | 5 | 1 | 158 | 1 | 157 | 2.53e-31 | 114 |
| Msa0717120 | AT4G11880.3 | 41.818 | 165 | 81 | 5 | 1 | 158 | 1 | 157 | 2.53e-31 | 114 |
| Msa0717120 | AT3G58780.5 | 37.433 | 187 | 102 | 4 | 1 | 180 | 22 | 200 | 2.41e-30 | 113 |
| Msa0717120 | AT3G58780.1 | 37.433 | 187 | 102 | 4 | 1 | 180 | 16 | 194 | 3.02e-30 | 112 |
| Msa0717120 | AT4G11880.4 | 40.984 | 183 | 89 | 6 | 1 | 176 | 1 | 171 | 8.66e-30 | 110 |
| Msa0717120 | AT4G11880.1 | 40.984 | 183 | 89 | 6 | 1 | 176 | 1 | 171 | 8.66e-30 | 110 |
| Msa0717120 | AT2G42830.1 | 36.453 | 203 | 102 | 6 | 1 | 186 | 16 | 208 | 1.04e-29 | 111 |
| Msa0717120 | AT4G22950.2 | 36.571 | 175 | 95 | 4 | 1 | 168 | 1 | 166 | 1.69e-29 | 108 |
| Msa0717120 | AT5G13790.2 | 38.624 | 189 | 97 | 3 | 1 | 182 | 1 | 177 | 4.21e-29 | 110 |
| Msa0717120 | AT2G45650.1 | 36.723 | 177 | 102 | 4 | 1 | 173 | 1 | 171 | 5.75e-29 | 109 |
| Msa0717120 | AT4G22950.3 | 36.571 | 175 | 95 | 4 | 1 | 168 | 1 | 166 | 6.28e-29 | 108 |
| Msa0717120 | AT4G22950.1 | 36.571 | 175 | 95 | 4 | 1 | 168 | 1 | 166 | 6.28e-29 | 108 |
| Msa0717120 | AT5G51870.2 | 42.857 | 154 | 74 | 6 | 1 | 147 | 1 | 147 | 6.37e-29 | 107 |
| Msa0717120 | AT4G09960.6 | 37.766 | 188 | 84 | 6 | 1 | 173 | 2 | 171 | 6.47e-29 | 108 |
| Msa0717120 | AT4G09960.1 | 37.766 | 188 | 84 | 6 | 1 | 173 | 1 | 170 | 6.88e-29 | 108 |
| Msa0717120 | AT5G51870.4 | 39.037 | 187 | 100 | 6 | 1 | 180 | 1 | 180 | 6.91e-29 | 108 |
| Msa0717120 | AT5G51870.1 | 40.223 | 179 | 93 | 6 | 1 | 172 | 1 | 172 | 7.57e-29 | 108 |
| Msa0717120 | AT4G09960.5 | 37.766 | 188 | 84 | 6 | 1 | 173 | 11 | 180 | 8.56e-29 | 108 |
| Msa0717120 | AT5G51870.3 | 39.037 | 187 | 100 | 6 | 1 | 180 | 11 | 190 | 9.95e-29 | 108 |
| Msa0717120 | AT5G51870.5 | 42.857 | 154 | 74 | 6 | 1 | 147 | 24 | 170 | 1.02e-28 | 107 |
| Msa0717120 | AT3G58780.2 | 36.898 | 187 | 96 | 4 | 1 | 180 | 16 | 187 | 1.14e-28 | 108 |
| Msa0717120 | AT5G13790.1 | 39.011 | 182 | 103 | 3 | 1 | 182 | 1 | 174 | 1.22e-28 | 109 |
| Msa0717120 | AT4G09960.3 | 37.766 | 188 | 84 | 6 | 1 | 173 | 27 | 196 | 1.96e-28 | 108 |
| Msa0717120 | AT4G18960.1 | 40.556 | 180 | 88 | 6 | 2 | 173 | 18 | 186 | 2.55e-28 | 108 |
| Msa0717120 | AT3G58780.4 | 42.384 | 151 | 72 | 4 | 1 | 144 | 16 | 158 | 2.72e-28 | 108 |
| Msa0717120 | AT3G61120.1 | 37.288 | 177 | 102 | 4 | 1 | 174 | 1 | 171 | 3.44e-28 | 107 |
| Msa0717120 | AT5G62165.3 | 36.559 | 186 | 101 | 5 | 1 | 180 | 1 | 175 | 6.34e-28 | 105 |
| Msa0717120 | AT5G62165.1 | 36.559 | 186 | 101 | 5 | 1 | 180 | 1 | 175 | 6.34e-28 | 105 |
| Msa0717120 | AT5G62165.2 | 36.559 | 186 | 101 | 5 | 1 | 180 | 1 | 175 | 6.34e-28 | 105 |
| Msa0717120 | AT1G69120.2 | 34.946 | 186 | 99 | 5 | 1 | 175 | 1 | 175 | 7.04e-28 | 106 |
| Msa0717120 | AT1G69120.1 | 34.946 | 186 | 99 | 5 | 1 | 175 | 1 | 175 | 9.13e-28 | 106 |
| Msa0717120 | AT4G09960.2 | 40.506 | 158 | 63 | 5 | 1 | 143 | 1 | 142 | 1.07e-27 | 105 |
| Msa0717120 | AT5G62165.17 | 37.805 | 164 | 89 | 4 | 1 | 158 | 1 | 157 | 1.12e-27 | 103 |
| Msa0717120 | AT5G62165.12 | 37.805 | 164 | 89 | 4 | 1 | 158 | 1 | 157 | 1.12e-27 | 103 |
| Msa0717120 | AT5G62165.11 | 37.805 | 164 | 89 | 4 | 1 | 158 | 1 | 157 | 1.12e-27 | 103 |
| Msa0717120 | AT1G24260.1 | 37.778 | 180 | 102 | 4 | 1 | 174 | 1 | 176 | 1.24e-27 | 106 |
| Msa0717120 | AT5G62165.6 | 39.216 | 153 | 80 | 4 | 1 | 147 | 1 | 146 | 1.33e-27 | 103 |
| Msa0717120 | AT5G62165.9 | 39.216 | 153 | 80 | 4 | 1 | 147 | 1 | 146 | 1.33e-27 | 103 |
| Msa0717120 | AT5G62165.7 | 39.216 | 153 | 80 | 4 | 1 | 147 | 1 | 146 | 1.33e-27 | 103 |
| Msa0717120 | AT5G62165.8 | 39.216 | 153 | 80 | 4 | 1 | 147 | 1 | 146 | 1.33e-27 | 103 |
| Msa0717120 | AT5G62165.13 | 39.216 | 153 | 80 | 4 | 1 | 147 | 1 | 146 | 1.33e-27 | 103 |
| Msa0717120 | AT1G24260.2 | 37.569 | 181 | 102 | 4 | 1 | 174 | 1 | 177 | 1.40e-27 | 105 |
| Msa0717120 | AT4G09960.4 | 36.842 | 190 | 87 | 6 | 1 | 173 | 96 | 269 | 1.60e-27 | 107 |
| Msa0717120 | AT5G15800.1 | 38.983 | 177 | 98 | 5 | 1 | 172 | 1 | 172 | 2.48e-27 | 105 |
| Msa0717120 | AT5G15800.2 | 38.983 | 177 | 98 | 5 | 1 | 172 | 1 | 172 | 3.15e-27 | 105 |
| Msa0717120 | AT3G58780.3 | 33.810 | 210 | 103 | 4 | 1 | 180 | 16 | 219 | 6.05e-27 | 104 |
| Msa0717120 | AT3G02310.2 | 43.448 | 145 | 72 | 5 | 1 | 140 | 1 | 140 | 6.42e-27 | 103 |
| Msa0717120 | AT1G26310.1 | 34.574 | 188 | 99 | 5 | 1 | 175 | 1 | 177 | 7.49e-27 | 104 |
| Msa0717120 | AT2G45660.2 | 39.024 | 164 | 89 | 4 | 1 | 159 | 1 | 158 | 7.88e-27 | 101 |
| Msa0717120 | AT3G02310.1 | 43.448 | 145 | 72 | 5 | 1 | 140 | 1 | 140 | 1.70e-26 | 103 |
| Msa0717120 | AT2G45660.1 | 38.150 | 173 | 96 | 4 | 1 | 168 | 1 | 167 | 1.88e-26 | 102 |
| Msa0717120 | AT2G03710.2 | 33.679 | 193 | 122 | 3 | 1 | 190 | 1 | 190 | 1.91e-26 | 103 |
| Msa0717120 | AT2G03710.3 | 39.726 | 146 | 82 | 3 | 1 | 143 | 1 | 143 | 2.15e-26 | 101 |
| Msa0717120 | AT2G03710.1 | 33.679 | 193 | 122 | 3 | 1 | 190 | 1 | 190 | 2.18e-26 | 103 |
| Msa0717120 | AT5G23260.2 | 38.889 | 180 | 96 | 4 | 1 | 174 | 1 | 172 | 4.52e-26 | 102 |
| Msa0717120 | AT1G24260.3 | 37.427 | 171 | 96 | 4 | 1 | 164 | 1 | 167 | 5.18e-26 | 101 |
| Msa0717120 | AT5G23260.4 | 38.889 | 180 | 96 | 4 | 1 | 174 | 17 | 188 | 6.83e-26 | 102 |
| Msa0717120 | AT3G30260.1 | 40.132 | 152 | 81 | 5 | 1 | 147 | 1 | 147 | 1.07e-25 | 100 |
| Msa0717120 | AT4G37940.4 | 32.456 | 228 | 119 | 7 | 1 | 218 | 1 | 203 | 1.45e-25 | 99.8 |
| Msa0717120 | AT5G62165.10 | 39.597 | 149 | 77 | 4 | 1 | 143 | 1 | 142 | 4.31e-25 | 98.2 |
| Msa0717120 | AT5G62165.4 | 39.597 | 149 | 77 | 4 | 1 | 143 | 1 | 142 | 4.31e-25 | 98.2 |
| Msa0717120 | AT3G57230.1 | 31.933 | 238 | 126 | 9 | 1 | 218 | 1 | 222 | 1.08e-24 | 98.2 |
| Msa0717120 | AT3G57230.4 | 31.933 | 238 | 126 | 9 | 1 | 218 | 1 | 222 | 1.08e-24 | 98.2 |
| Msa0717120 | AT3G57230.2 | 36.306 | 157 | 78 | 5 | 1 | 147 | 1 | 145 | 1.98e-24 | 95.1 |
| Msa0717120 | AT4G37940.3 | 37.255 | 153 | 74 | 4 | 1 | 143 | 1 | 141 | 2.17e-24 | 95.9 |
| Msa0717120 | AT3G57390.3 | 36.747 | 166 | 89 | 4 | 1 | 155 | 1 | 161 | 2.66e-24 | 97.1 |
| Msa0717120 | AT3G57390.1 | 36.747 | 166 | 89 | 4 | 1 | 155 | 1 | 161 | 4.18e-24 | 97.1 |
| Msa0717120 | AT4G37940.1 | 34.831 | 178 | 94 | 5 | 1 | 168 | 1 | 166 | 7.21e-24 | 95.9 |
| Msa0717120 | AT5G23260.1 | 38.889 | 180 | 91 | 5 | 1 | 174 | 17 | 183 | 1.27e-23 | 95.9 |
| Msa0717120 | AT5G62165.14 | 55.844 | 77 | 32 | 1 | 1 | 77 | 1 | 75 | 2.78e-23 | 90.9 |
| Msa0717120 | AT5G51860.2 | 34.615 | 182 | 115 | 3 | 1 | 180 | 1 | 180 | 6.03e-23 | 92.8 |
| Msa0717120 | AT5G65070.4 | 37.086 | 151 | 85 | 5 | 1 | 150 | 1 | 142 | 7.47e-23 | 90.9 |
| Msa0717120 | AT5G23260.3 | 41.611 | 149 | 73 | 4 | 1 | 143 | 1 | 141 | 1.15e-22 | 92.8 |
| Msa0717120 | AT2G22540.3 | 37.349 | 166 | 85 | 6 | 1 | 157 | 1 | 156 | 1.97e-22 | 92.0 |
| Msa0717120 | AT2G22540.1 | 37.349 | 166 | 85 | 6 | 1 | 157 | 1 | 156 | 1.97e-22 | 92.0 |
| Msa0717120 | AT4G24540.1 | 40.789 | 152 | 79 | 5 | 1 | 147 | 1 | 146 | 3.01e-22 | 91.3 |
| Msa0717120 | AT5G51860.1 | 36.196 | 163 | 100 | 3 | 1 | 161 | 1 | 161 | 4.20e-22 | 90.5 |
| Msa0717120 | AT5G65070.1 | 35.503 | 169 | 99 | 5 | 1 | 168 | 1 | 160 | 8.67e-22 | 89.7 |
| Msa0717120 | AT2G22630.1 | 32.903 | 155 | 86 | 3 | 1 | 147 | 1 | 145 | 1.49e-21 | 89.7 |
| Msa0717120 | AT2G22630.2 | 32.903 | 155 | 86 | 3 | 1 | 147 | 1 | 145 | 1.49e-21 | 89.7 |
| Msa0717120 | AT2G14210.1 | 31.556 | 225 | 124 | 8 | 1 | 208 | 1 | 212 | 3.01e-21 | 89.0 |
| Msa0717120 | AT2G14210.2 | 31.556 | 225 | 124 | 8 | 1 | 208 | 1 | 212 | 3.89e-21 | 88.6 |
| Msa0717120 | AT1G71692.1 | 35.135 | 185 | 105 | 4 | 1 | 174 | 1 | 181 | 1.05e-20 | 87.0 |
| Msa0717120 | AT5G10140.2 | 37.013 | 154 | 67 | 5 | 1 | 143 | 1 | 135 | 2.16e-20 | 85.1 |
| Msa0717120 | AT5G10140.4 | 34.320 | 169 | 81 | 5 | 1 | 158 | 1 | 150 | 2.43e-20 | 85.1 |
| Msa0717120 | AT2G22540.2 | 36.747 | 166 | 81 | 6 | 1 | 157 | 1 | 151 | 3.97e-20 | 85.9 |
| Msa0717120 | AT5G10140.3 | 37.013 | 154 | 67 | 5 | 1 | 143 | 1 | 135 | 4.98e-20 | 84.7 |
| Msa0717120 | AT5G10140.1 | 36.076 | 158 | 71 | 5 | 1 | 147 | 1 | 139 | 5.46e-20 | 84.7 |
| Msa0717120 | AT5G65050.1 | 33.333 | 165 | 88 | 5 | 1 | 158 | 1 | 150 | 4.32e-19 | 82.0 |
| Msa0717120 | AT5G65050.2 | 34.437 | 151 | 83 | 5 | 1 | 147 | 1 | 139 | 4.67e-19 | 81.6 |
| Msa0717120 | AT5G65060.3 | 33.766 | 154 | 80 | 5 | 1 | 147 | 1 | 139 | 4.82e-19 | 82.0 |
| Msa0717120 | AT5G65060.1 | 33.117 | 154 | 81 | 5 | 1 | 147 | 1 | 139 | 7.39e-19 | 81.6 |
| Msa0717120 | AT5G65050.3 | 31.351 | 185 | 105 | 5 | 1 | 178 | 1 | 170 | 9.10e-19 | 81.6 |
| Msa0717120 | AT5G65080.3 | 31.694 | 183 | 109 | 6 | 1 | 181 | 8 | 176 | 2.09e-18 | 80.5 |
| Msa0717120 | AT1G77080.5 | 34.659 | 176 | 105 | 5 | 1 | 175 | 1 | 167 | 2.18e-18 | 79.7 |
| Msa0717120 | AT1G22130.1 | 66.667 | 54 | 18 | 0 | 1 | 54 | 1 | 54 | 3.39e-18 | 82.4 |
| Msa0717120 | AT5G65070.3 | 30.412 | 194 | 107 | 6 | 1 | 168 | 1 | 192 | 4.33e-18 | 80.5 |
| Msa0717120 | AT1G77980.1 | 64.815 | 54 | 19 | 0 | 1 | 54 | 1 | 54 | 8.16e-18 | 81.3 |
| Msa0717120 | AT5G65070.5 | 32.432 | 185 | 94 | 6 | 1 | 158 | 1 | 181 | 1.07e-17 | 79.0 |
| Msa0717120 | AT5G65050.5 | 31.667 | 180 | 100 | 5 | 1 | 178 | 1 | 159 | 1.14e-17 | 78.2 |
| Msa0717120 | AT5G65070.2 | 31.795 | 195 | 102 | 6 | 1 | 168 | 1 | 191 | 1.28e-17 | 79.3 |
| Msa0717120 | AT5G65060.2 | 33.557 | 149 | 76 | 5 | 1 | 147 | 1 | 128 | 1.85e-17 | 77.8 |
| Msa0717120 | AT1G77080.11 | 34.320 | 169 | 101 | 5 | 1 | 168 | 1 | 160 | 3.59e-17 | 76.6 |
| Msa0717120 | AT1G77080.4 | 34.337 | 166 | 99 | 5 | 1 | 165 | 1 | 157 | 6.85e-17 | 76.3 |
| Msa0717120 | AT5G65080.2 | 31.818 | 154 | 82 | 3 | 1 | 147 | 8 | 145 | 3.00e-16 | 74.7 |
| Msa0717120 | AT1G47760.1 | 29.371 | 143 | 93 | 3 | 1 | 142 | 1 | 136 | 4.83e-15 | 71.2 |
| Msa0717120 | AT2G34440.1 | 39.241 | 79 | 46 | 1 | 1 | 79 | 1 | 77 | 6.19e-15 | 70.5 |
| Msa0717120 | AT2G03060.2 | 37.097 | 124 | 73 | 4 | 1 | 123 | 1 | 120 | 1.58e-14 | 72.4 |
| Msa0717120 | AT2G03060.3 | 37.097 | 124 | 73 | 4 | 1 | 123 | 1 | 120 | 1.59e-14 | 72.4 |
| Msa0717120 | AT2G03060.7 | 37.097 | 124 | 73 | 4 | 1 | 123 | 1 | 120 | 1.59e-14 | 72.4 |
| Msa0717120 | AT2G03060.1 | 37.097 | 124 | 73 | 4 | 1 | 123 | 1 | 120 | 1.59e-14 | 72.4 |
| Msa0717120 | AT1G77950.3 | 55.556 | 54 | 24 | 0 | 1 | 54 | 1 | 54 | 1.81e-14 | 70.9 |
| Msa0717120 | AT1G77950.2 | 55.556 | 54 | 24 | 0 | 1 | 54 | 1 | 54 | 1.81e-14 | 70.9 |
| Msa0717120 | AT1G77950.1 | 55.556 | 54 | 24 | 0 | 1 | 54 | 1 | 54 | 1.81e-14 | 70.9 |
| Msa0717120 | AT1G77950.4 | 55.556 | 54 | 24 | 0 | 1 | 54 | 1 | 54 | 1.81e-14 | 70.9 |
| Msa0717120 | AT1G77080.12 | 31.875 | 160 | 95 | 5 | 1 | 159 | 1 | 147 | 2.11e-14 | 68.6 |
| Msa0717120 | AT1G77080.8 | 31.915 | 188 | 101 | 6 | 1 | 165 | 1 | 184 | 2.26e-14 | 70.1 |
| Msa0717120 | AT1G31140.2 | 34.000 | 150 | 87 | 3 | 1 | 143 | 1 | 145 | 2.55e-14 | 69.7 |
| Msa0717120 | AT1G72350.1 | 50.000 | 70 | 31 | 1 | 2 | 71 | 43 | 108 | 5.09e-14 | 69.3 |
| Msa0717120 | AT1G18750.1 | 38.235 | 102 | 58 | 1 | 1 | 102 | 1 | 97 | 7.71e-14 | 70.5 |
| Msa0717120 | AT1G18750.4 | 38.235 | 102 | 58 | 1 | 1 | 102 | 1 | 97 | 7.93e-14 | 70.1 |
| Msa0717120 | AT1G31140.1 | 43.836 | 73 | 41 | 0 | 1 | 73 | 1 | 73 | 7.99e-14 | 68.6 |
| Msa0717120 | AT1G18750.3 | 38.235 | 102 | 58 | 1 | 1 | 102 | 1 | 97 | 9.84e-14 | 70.1 |
| Msa0717120 | AT1G77080.2 | 31.325 | 166 | 100 | 5 | 1 | 165 | 1 | 153 | 1.42e-13 | 67.4 |
| Msa0717120 | AT3G66656.1 | 45.161 | 62 | 34 | 0 | 1 | 62 | 1 | 62 | 2.80e-13 | 66.2 |
| Msa0717120 | AT3G04100.1 | 33.884 | 121 | 76 | 2 | 2 | 122 | 14 | 130 | 3.12e-13 | 66.6 |
| Msa0717120 | AT1G01530.1 | 44.928 | 69 | 36 | 1 | 1 | 69 | 6 | 72 | 4.75e-13 | 67.0 |
| Msa0717120 | AT5G60440.1 | 44.286 | 70 | 37 | 1 | 2 | 71 | 7 | 74 | 3.03e-12 | 65.1 |
| Msa0717120 | AT1G69540.1 | 58.491 | 53 | 22 | 0 | 1 | 53 | 1 | 53 | 5.73e-12 | 64.7 |
| Msa0717120 | AT1G69540.2 | 58.491 | 53 | 22 | 0 | 1 | 53 | 1 | 53 | 6.68e-12 | 64.7 |
| Msa0717120 | AT4G37435.1 | 47.368 | 57 | 30 | 0 | 1 | 57 | 1 | 57 | 8.40e-12 | 62.4 |
| Msa0717120 | AT1G65360.1 | 45.161 | 62 | 34 | 0 | 1 | 62 | 6 | 67 | 8.51e-12 | 63.2 |
| Msa0717120 | AT4G36590.1 | 50.820 | 61 | 30 | 0 | 2 | 62 | 7 | 67 | 3.05e-11 | 62.0 |
| Msa0717120 | AT2G24840.1 | 42.254 | 71 | 39 | 1 | 1 | 71 | 62 | 130 | 5.06e-11 | 61.2 |
Find 53 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTGAACAGCTGAATTAA+TGG | 0.268565 | 5_1:+10705648 | Msa0717120:exon |
| GATCAATATCAGAAGACTTT+GGG | 0.288044 | 5_1:+10703929 | Msa0717120:CDS |
| CTCTACCTAGATGGAGAGTT+TGG | 0.288328 | 5_1:-10705798 | None:intergenic |
| GTAGTGAAGATCATTGAAAA+TGG | 0.320341 | 5_1:+10703598 | Msa0717120:exon |
| AGGTGAGGGTGGTATGGAAT+TGG | 0.393769 | 5_1:+10704202 | Msa0717120:CDS |
| GACCGATACCTGTAGGAAAA+AGG | 0.406903 | 5_1:+10705016 | Msa0717120:CDS |
| TGATCAATATCAGAAGACTT+TGG | 0.413026 | 5_1:+10703928 | Msa0717120:CDS |
| ACATACTCAAAGAGAAGAAA+TGG | 0.436448 | 5_1:+10703674 | Msa0717120:CDS |
| TGATTGAGAATCCTACTAAC+AGG | 0.439798 | 5_1:+10703645 | Msa0717120:CDS |
| TATTATGCAGGTTAGAAGCT+TGG | 0.460544 | 5_1:+10705132 | Msa0717120:intron |
| TTGCTAATTCTCTACCTAGA+TGG | 0.464851 | 5_1:-10705807 | None:intergenic |
| TAGTGTTCTTTGTGATGCTA+AGG | 0.479256 | 5_1:+10703721 | Msa0717120:CDS |
| TATGTCACTTGCCTGTTAGT+AGG | 0.489132 | 5_1:-10703656 | None:intergenic |
| TAGAATAGGTGAGGGTGGTA+TGG | 0.489353 | 5_1:+10704196 | Msa0717120:CDS |
| TGGTTCCAAACTCTCCATCT+AGG | 0.489403 | 5_1:+10705793 | Msa0717120:three_prime_UTR |
| CCTCATCACCACGGAGAAGA+AGG | 0.492013 | 5_1:+10705601 | Msa0717120:CDS |
| TATCACATTAAACTAAAAGT+TGG | 0.492089 | 5_1:+10705773 | Msa0717120:three_prime_UTR |
| TAGTGAAGATCATTGAAAAT+GGG | 0.509413 | 5_1:+10703599 | Msa0717120:exon |
| GATAGTACTTACGTTAGTCC+AGG | 0.515987 | 5_1:-10703794 | None:intergenic |
| CGAGGAATCAGCAGTTGCAT+TGG | 0.519957 | 5_1:+10705522 | Msa0717120:CDS |
| AAGCAAATTTAACATGACAT+TGG | 0.535516 | 5_1:-10705673 | None:intergenic |
| ATACAGAGTGGAGGCACCAT+TGG | 0.537865 | 5_1:-10705545 | None:intergenic |
| ATAAGCTTAGAAAACAGATC+AGG | 0.539761 | 5_1:+10704091 | Msa0717120:CDS |
| GAATTGAAAAGGCATAGAAT+AGG | 0.545034 | 5_1:+10704182 | Msa0717120:intron |
| AGAAGCTTGGAGCAGATGAA+TGG | 0.546698 | 5_1:+10705145 | Msa0717120:CDS |
| CCTTCTTCTCCGTGGTGATG+AGG | 0.550144 | 5_1:-10705601 | None:intergenic |
| TGCTAAAATACGTGAAAGGA+AGG | 0.557946 | 5_1:+10704280 | Msa0717120:CDS |
| ATCAATATCAGAAGACTTTG+GGG | 0.560571 | 5_1:+10703930 | Msa0717120:CDS |
| ATAGTACTTACGTTAGTCCA+GGG | 0.566211 | 5_1:-10703793 | None:intergenic |
| AGATCATTGAAAATGGGTCG+TGG | 0.568091 | 5_1:+10703605 | Msa0717120:exon |
| CGTGGAAAAGAAATTGTGGA+TGG | 0.571656 | 5_1:-10705489 | None:intergenic |
| TTTCCACGACGAAGGAGACG+AGG | 0.578253 | 5_1:+10705504 | Msa0717120:CDS |
| ATGCATGAGTACATCACCCC+TGG | 0.578439 | 5_1:+10703776 | Msa0717120:CDS |
| TCAGCAGTTGCATTGGCCAA+TGG | 0.579080 | 5_1:+10705529 | Msa0717120:CDS |
| TCGTCGTGGAAAAGAAATTG+TGG | 0.590379 | 5_1:-10705493 | None:intergenic |
| TACGCAGTTGCTGAAAGCTA+AGG | 0.590906 | 5_1:-10704229 | None:intergenic |
| AGGCATAGAATAGGTGAGGG+TGG | 0.593443 | 5_1:+10704191 | Msa0717120:intron |
| GCAACTGCGTAGTCTTGAAG+AGG | 0.601885 | 5_1:+10704241 | Msa0717120:CDS |
| GAAAAGGCATAGAATAGGTG+AGG | 0.603052 | 5_1:+10704187 | Msa0717120:intron |
| GATCATTGAAAATGGGTCGT+GGG | 0.604178 | 5_1:+10703606 | Msa0717120:exon |
| GAGGAAGATTCAGATGAGAA+TGG | 0.625361 | 5_1:-10705582 | None:intergenic |
| TTAATTCAGCTGTTCAACCA+AGG | 0.641575 | 5_1:-10705645 | None:intergenic |
| AAACTCGGACCGATACCTGT+AGG | 0.642772 | 5_1:+10705009 | Msa0717120:CDS |
| ATTCCTCGTCTCCTTCGTCG+TGG | 0.643427 | 5_1:-10705507 | None:intergenic |
| TCTGTGGCGTTCTCACTATG+AGG | 0.645842 | 5_1:+10703961 | Msa0717120:CDS |
| CCATTGCTAAAATACGTGAA+AGG | 0.651424 | 5_1:+10704276 | Msa0717120:CDS |
| AAAAGGCATAGAATAGGTGA+GGG | 0.655347 | 5_1:+10704188 | Msa0717120:intron |
| AGTTTCATGTGATCAAAACT+CGG | 0.674559 | 5_1:+10704994 | Msa0717120:intron |
| CTGACAGAATGCATACAGAG+TGG | 0.686982 | 5_1:-10705557 | None:intergenic |
| ACAGAATGCATACAGAGTGG+AGG | 0.688841 | 5_1:-10705554 | None:intergenic |
| CTGAATCTTCCTCATCACCA+CGG | 0.690792 | 5_1:+10705592 | Msa0717120:CDS |
| TAGTACTTACGTTAGTCCAG+GGG | 0.693878 | 5_1:-10703792 | None:intergenic |
| TCAATATCAGAAGACTTTGG+GGG | 0.712577 | 5_1:+10703931 | Msa0717120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATATTAATATTTTTT+TGG | + | chr5_1:10704133-10704152 | Msa0717120:intron | 0.0% |
| !!! | TATATATATTAATATTTTTT+TGG | + | chr5_1:10704133-10704152 | Msa0717120:intron | 0.0% |
| !! | ACTTTATATAAATATTATGC+AGG | + | chr5_1:10705120-10705139 | Msa0717120:intron | 15.0% |
| !! | ACTTTATATAAATATTATGC+AGG | + | chr5_1:10705120-10705139 | Msa0717120:intron | 15.0% |
| !!! | ATTATGTTTAAGTTTTGTTG+AGG | - | chr5_1:10704565-10704584 | None:intergenic | 20.0% |
| !! | ATAAAGTTTAAATAGACCAT+AGG | - | chr5_1:10705107-10705126 | None:intergenic | 20.0% |
| !! | ACAAGAAAAAGTTGAAATAA+CGG | - | chr5_1:10705343-10705362 | None:intergenic | 20.0% |
| !! | ATGATTTATATATAGAGAAG+AGG | + | chr5_1:10705404-10705423 | Msa0717120:intron | 20.0% |
| !! | TATCACATTAAACTAAAAGT+TGG | + | chr5_1:10705773-10705792 | Msa0717120:three_prime_UTR | 20.0% |
| !!! | ATTATGTTTAAGTTTTGTTG+AGG | - | chr5_1:10704565-10704584 | None:intergenic | 20.0% |
| !! | ATAAAGTTTAAATAGACCAT+AGG | - | chr5_1:10705107-10705126 | None:intergenic | 20.0% |
| !! | ACAAGAAAAAGTTGAAATAA+CGG | - | chr5_1:10705343-10705362 | None:intergenic | 20.0% |
| !! | ATGATTTATATATAGAGAAG+AGG | + | chr5_1:10705404-10705423 | Msa0717120:intron | 20.0% |
| !! | TATCACATTAAACTAAAAGT+TGG | + | chr5_1:10705773-10705792 | Msa0717120:three_prime_UTR | 20.0% |
| ! | TAGTGAAGATCATTGAAAAT+GGG | + | chr5_1:10703599-10703618 | Msa0717120:exon | 25.0% |
| ! | ATCAATAATCTTCTTTGTAC+TGG | - | chr5_1:10703912-10703931 | None:intergenic | 25.0% |
| !!! | GATTTTAATGTGAATTTGTG+TGG | + | chr5_1:10704022-10704041 | Msa0717120:intron | 25.0% |
| !!! | TTTTTTTGGTGAAATCTGAT+TGG | + | chr5_1:10704147-10704166 | Msa0717120:intron | 25.0% |
| !! | CAATACTACTTCCAATTTTA+TGG | + | chr5_1:10704305-10704324 | Msa0717120:intron | 25.0% |
| ! | GAATTGAAGATCCATAAAAT+TGG | - | chr5_1:10704319-10704338 | None:intergenic | 25.0% |
| !!! | TTTTGAGTAACTTGTAGAAA+GGG | - | chr5_1:10704379-10704398 | None:intergenic | 25.0% |
| ! | TTTGAAGATGTGACTTAATT+AGG | + | chr5_1:10704465-10704484 | Msa0717120:intron | 25.0% |
| ! | TTATTAGTAGTATGTGAAAG+AGG | - | chr5_1:10704540-10704559 | None:intergenic | 25.0% |
| ! | TTAATAGAGAGAAAAACTCT+AGG | - | chr5_1:10704796-10704815 | None:intergenic | 25.0% |
| ! | GTGATGAAAATTCATTTCAT+AGG | - | chr5_1:10704837-10704856 | None:intergenic | 25.0% |
| ! | TCACATGAACAAGAAAAAAA+TGG | - | chr5_1:10705074-10705093 | None:intergenic | 25.0% |
| ! | ATGTGAATTTGATAAACCTA+TGG | + | chr5_1:10705088-10705107 | Msa0717120:intron | 25.0% |
| ! | TACTAGAAAAAGTTGAAATG+TGG | + | chr5_1:10705223-10705242 | Msa0717120:intron | 25.0% |
| ! | TATTCCATTCACACAATAAA+AGG | - | chr5_1:10705444-10705463 | None:intergenic | 25.0% |
| ! | TGAATGGAATAACAATAAGA+AGG | + | chr5_1:10705453-10705472 | Msa0717120:intron | 25.0% |
| ! | AAGCAAATTTAACATGACAT+TGG | - | chr5_1:10705676-10705695 | None:intergenic | 25.0% |
| ! | TAGTGAAGATCATTGAAAAT+GGG | + | chr5_1:10703599-10703618 | Msa0717120:exon | 25.0% |
| ! | ATCAATAATCTTCTTTGTAC+TGG | - | chr5_1:10703912-10703931 | None:intergenic | 25.0% |
| !!! | GATTTTAATGTGAATTTGTG+TGG | + | chr5_1:10704022-10704041 | Msa0717120:intron | 25.0% |
| !!! | TTTTTTTGGTGAAATCTGAT+TGG | + | chr5_1:10704147-10704166 | Msa0717120:intron | 25.0% |
| !! | CAATACTACTTCCAATTTTA+TGG | + | chr5_1:10704305-10704324 | Msa0717120:intron | 25.0% |
| ! | GAATTGAAGATCCATAAAAT+TGG | - | chr5_1:10704319-10704338 | None:intergenic | 25.0% |
| !!! | TTTTGAGTAACTTGTAGAAA+GGG | - | chr5_1:10704379-10704398 | None:intergenic | 25.0% |
| ! | TTTGAAGATGTGACTTAATT+AGG | + | chr5_1:10704465-10704484 | Msa0717120:intron | 25.0% |
| ! | TTATTAGTAGTATGTGAAAG+AGG | - | chr5_1:10704540-10704559 | None:intergenic | 25.0% |
| ! | TTAATAGAGAGAAAAACTCT+AGG | - | chr5_1:10704796-10704815 | None:intergenic | 25.0% |
| ! | GTGATGAAAATTCATTTCAT+AGG | - | chr5_1:10704837-10704856 | None:intergenic | 25.0% |
| ! | TCACATGAACAAGAAAAAAA+TGG | - | chr5_1:10705074-10705093 | None:intergenic | 25.0% |
| ! | ATGTGAATTTGATAAACCTA+TGG | + | chr5_1:10705088-10705107 | Msa0717120:intron | 25.0% |
| ! | TACTAGAAAAAGTTGAAATG+TGG | + | chr5_1:10705223-10705242 | Msa0717120:intron | 25.0% |
| ! | TATTCCATTCACACAATAAA+AGG | - | chr5_1:10705444-10705463 | None:intergenic | 25.0% |
| ! | TGAATGGAATAACAATAAGA+AGG | + | chr5_1:10705453-10705472 | Msa0717120:intron | 25.0% |
| ! | AAGCAAATTTAACATGACAT+TGG | - | chr5_1:10705676-10705695 | None:intergenic | 25.0% |
| GTAGTGAAGATCATTGAAAA+TGG | + | chr5_1:10703598-10703617 | Msa0717120:exon | 30.0% | |
| ACATACTCAAAGAGAAGAAA+TGG | + | chr5_1:10703674-10703693 | Msa0717120:CDS | 30.0% | |
| !!! | CTCATGCATCTTGTTATTTT+TGG | - | chr5_1:10703765-10703784 | None:intergenic | 30.0% |
| TGATCAATATCAGAAGACTT+TGG | + | chr5_1:10703928-10703947 | Msa0717120:CDS | 30.0% | |
| GATCAATATCAGAAGACTTT+GGG | + | chr5_1:10703929-10703948 | Msa0717120:CDS | 30.0% | |
| ATCAATATCAGAAGACTTTG+GGG | + | chr5_1:10703930-10703949 | Msa0717120:CDS | 30.0% | |
| ! | TGATCTGTTTTCTAAGCTTA+TGG | - | chr5_1:10704092-10704111 | None:intergenic | 30.0% |
| ATAAGCTTAGAAAACAGATC+AGG | + | chr5_1:10704091-10704110 | Msa0717120:CDS | 30.0% | |
| ! | GAATTGAAAAGGCATAGAAT+AGG | + | chr5_1:10704182-10704201 | Msa0717120:intron | 30.0% |
| GTAGAAAGGGTGAAAATAAA+GGG | - | chr5_1:10704366-10704385 | None:intergenic | 30.0% | |
| TGTAGAAAGGGTGAAAATAA+AGG | - | chr5_1:10704367-10704386 | None:intergenic | 30.0% | |
| !! | CTTTTGAGTAACTTGTAGAA+AGG | - | chr5_1:10704380-10704399 | None:intergenic | 30.0% |
| TTTCTCTCTATTAAGCTTCA+AGG | + | chr5_1:10704802-10704821 | Msa0717120:intron | 30.0% | |
| AGTTTCATGTGATCAAAACT+CGG | + | chr5_1:10704994-10705013 | Msa0717120:intron | 30.0% | |
| AGAGACCGAAATAATAAAAG+TGG | - | chr5_1:10705312-10705331 | None:intergenic | 30.0% | |
| ATTATTTCGGTCTCTAATTG+CGG | + | chr5_1:10705317-10705336 | Msa0717120:intron | 30.0% | |
| ! | GTTTCCTTTTATTGTGTGAA+TGG | + | chr5_1:10705437-10705456 | Msa0717120:intron | 30.0% |
| !!! | TGTTTTATTTGCAAGAAGTG+TGG | + | chr5_1:10705842-10705861 | Msa0717120:three_prime_UTR | 30.0% |
| GTAGTGAAGATCATTGAAAA+TGG | + | chr5_1:10703598-10703617 | Msa0717120:exon | 30.0% | |
| ACATACTCAAAGAGAAGAAA+TGG | + | chr5_1:10703674-10703693 | Msa0717120:CDS | 30.0% | |
| !!! | CTCATGCATCTTGTTATTTT+TGG | - | chr5_1:10703765-10703784 | None:intergenic | 30.0% |
| TGATCAATATCAGAAGACTT+TGG | + | chr5_1:10703928-10703947 | Msa0717120:CDS | 30.0% | |
| GATCAATATCAGAAGACTTT+GGG | + | chr5_1:10703929-10703948 | Msa0717120:CDS | 30.0% | |
| ATCAATATCAGAAGACTTTG+GGG | + | chr5_1:10703930-10703949 | Msa0717120:CDS | 30.0% | |
| ! | TGATCTGTTTTCTAAGCTTA+TGG | - | chr5_1:10704092-10704111 | None:intergenic | 30.0% |
| ATAAGCTTAGAAAACAGATC+AGG | + | chr5_1:10704091-10704110 | Msa0717120:CDS | 30.0% | |
| ! | GAATTGAAAAGGCATAGAAT+AGG | + | chr5_1:10704182-10704201 | Msa0717120:intron | 30.0% |
| GTAGAAAGGGTGAAAATAAA+GGG | - | chr5_1:10704366-10704385 | None:intergenic | 30.0% | |
| TGTAGAAAGGGTGAAAATAA+AGG | - | chr5_1:10704367-10704386 | None:intergenic | 30.0% | |
| !! | CTTTTGAGTAACTTGTAGAA+AGG | - | chr5_1:10704380-10704399 | None:intergenic | 30.0% |
| TTTCTCTCTATTAAGCTTCA+AGG | + | chr5_1:10704802-10704821 | Msa0717120:intron | 30.0% | |
| AGTTTCATGTGATCAAAACT+CGG | + | chr5_1:10704994-10705013 | Msa0717120:intron | 30.0% | |
| AGAGACCGAAATAATAAAAG+TGG | - | chr5_1:10705312-10705331 | None:intergenic | 30.0% | |
| ATTATTTCGGTCTCTAATTG+CGG | + | chr5_1:10705317-10705336 | Msa0717120:intron | 30.0% | |
| ! | GTTTCCTTTTATTGTGTGAA+TGG | + | chr5_1:10705437-10705456 | Msa0717120:intron | 30.0% |
| TGATTGAGAATCCTACTAAC+AGG | + | chr5_1:10703645-10703664 | Msa0717120:CDS | 35.0% | |
| TAGTGTTCTTTGTGATGCTA+AGG | + | chr5_1:10703721-10703740 | Msa0717120:CDS | 35.0% | |
| ATAGTACTTACGTTAGTCCA+GGG | - | chr5_1:10703796-10703815 | None:intergenic | 35.0% | |
| TCAATATCAGAAGACTTTGG+GGG | + | chr5_1:10703931-10703950 | Msa0717120:CDS | 35.0% | |
| ! | TTTTGGTGAAATCTGATTGG+TGG | + | chr5_1:10704150-10704169 | Msa0717120:intron | 35.0% |
| GGAGTTGTGATGAATTGAAA+AGG | + | chr5_1:10704171-10704190 | Msa0717120:intron | 35.0% | |
| ! | AAAAGGCATAGAATAGGTGA+GGG | + | chr5_1:10704188-10704207 | Msa0717120:intron | 35.0% |
| !!! | TTCACGTATTTTAGCAATGG+AGG | - | chr5_1:10704276-10704295 | None:intergenic | 35.0% |
| !!! | CCTTTCACGTATTTTAGCAA+TGG | - | chr5_1:10704279-10704298 | None:intergenic | 35.0% |
| CCATTGCTAAAATACGTGAA+AGG | + | chr5_1:10704276-10704295 | Msa0717120:CDS | 35.0% | |
| TGCTAAAATACGTGAAAGGA+AGG | + | chr5_1:10704280-10704299 | Msa0717120:CDS | 35.0% | |
| ! | TGCTCAATGTATAGAGCTTT+TGG | - | chr5_1:10704726-10704745 | None:intergenic | 35.0% |
| TATTATGCAGGTTAGAAGCT+TGG | + | chr5_1:10705132-10705151 | Msa0717120:intron | 35.0% | |
| AGTGTTAGAGACGTCAAATT+TGG | + | chr5_1:10705283-10705302 | Msa0717120:intron | 35.0% | |
| !!! | GGTGGCCACTTTTATTATTT+CGG | + | chr5_1:10705304-10705323 | Msa0717120:intron | 35.0% |
| TTAATTCAGCTGTTCAACCA+AGG | - | chr5_1:10705648-10705667 | None:intergenic | 35.0% | |
| TGGTTGAACAGCTGAATTAA+TGG | + | chr5_1:10705648-10705667 | Msa0717120:exon | 35.0% | |
| TTGCTAATTCTCTACCTAGA+TGG | - | chr5_1:10705810-10705829 | None:intergenic | 35.0% | |
| ! | TTTATTTGCAAGAAGTGTGG+TGG | + | chr5_1:10705845-10705864 | Msa0717120:three_prime_UTR | 35.0% |
| TGATTGAGAATCCTACTAAC+AGG | + | chr5_1:10703645-10703664 | Msa0717120:CDS | 35.0% | |
| TAGTGTTCTTTGTGATGCTA+AGG | + | chr5_1:10703721-10703740 | Msa0717120:CDS | 35.0% | |
| ATAGTACTTACGTTAGTCCA+GGG | - | chr5_1:10703796-10703815 | None:intergenic | 35.0% | |
| TCAATATCAGAAGACTTTGG+GGG | + | chr5_1:10703931-10703950 | Msa0717120:CDS | 35.0% | |
| ! | TTTTGGTGAAATCTGATTGG+TGG | + | chr5_1:10704150-10704169 | Msa0717120:intron | 35.0% |
| GGAGTTGTGATGAATTGAAA+AGG | + | chr5_1:10704171-10704190 | Msa0717120:intron | 35.0% | |
| ! | AAAAGGCATAGAATAGGTGA+GGG | + | chr5_1:10704188-10704207 | Msa0717120:intron | 35.0% |
| !!! | TTCACGTATTTTAGCAATGG+AGG | - | chr5_1:10704276-10704295 | None:intergenic | 35.0% |
| !!! | CCTTTCACGTATTTTAGCAA+TGG | - | chr5_1:10704279-10704298 | None:intergenic | 35.0% |
| CCATTGCTAAAATACGTGAA+AGG | + | chr5_1:10704276-10704295 | Msa0717120:CDS | 35.0% | |
| TGCTAAAATACGTGAAAGGA+AGG | + | chr5_1:10704280-10704299 | Msa0717120:CDS | 35.0% | |
| ! | TGCTCAATGTATAGAGCTTT+TGG | - | chr5_1:10704726-10704745 | None:intergenic | 35.0% |
| TATTATGCAGGTTAGAAGCT+TGG | + | chr5_1:10705132-10705151 | Msa0717120:intron | 35.0% | |
| AGTGTTAGAGACGTCAAATT+TGG | + | chr5_1:10705283-10705302 | Msa0717120:intron | 35.0% | |
| !!! | GGTGGCCACTTTTATTATTT+CGG | + | chr5_1:10705304-10705323 | Msa0717120:intron | 35.0% |
| TTAATTCAGCTGTTCAACCA+AGG | - | chr5_1:10705648-10705667 | None:intergenic | 35.0% | |
| TGGTTGAACAGCTGAATTAA+TGG | + | chr5_1:10705648-10705667 | Msa0717120:exon | 35.0% | |
| TTGCTAATTCTCTACCTAGA+TGG | - | chr5_1:10705810-10705829 | None:intergenic | 35.0% | |
| AGATCATTGAAAATGGGTCG+TGG | + | chr5_1:10703605-10703624 | Msa0717120:exon | 40.0% | |
| GATCATTGAAAATGGGTCGT+GGG | + | chr5_1:10703606-10703625 | Msa0717120:exon | 40.0% | |
| ! | TATGTCACTTGCCTGTTAGT+AGG | - | chr5_1:10703659-10703678 | None:intergenic | 40.0% |
| TAGTACTTACGTTAGTCCAG+GGG | - | chr5_1:10703795-10703814 | None:intergenic | 40.0% | |
| GATAGTACTTACGTTAGTCC+AGG | - | chr5_1:10703797-10703816 | None:intergenic | 40.0% | |
| ! | GAAAAGGCATAGAATAGGTG+AGG | + | chr5_1:10704187-10704206 | Msa0717120:intron | 40.0% |
| ! | GACCTTTTTCCTACAGGTAT+CGG | - | chr5_1:10705021-10705040 | None:intergenic | 40.0% |
| ! | ATTGCTGACCTTTTTCCTAC+AGG | - | chr5_1:10705027-10705046 | None:intergenic | 40.0% |
| GTTAGAGACGTCAAATTTGG+TGG | + | chr5_1:10705286-10705305 | Msa0717120:intron | 40.0% | |
| CGTGGAAAAGAAATTGTGGA+TGG | - | chr5_1:10705492-10705511 | None:intergenic | 40.0% | |
| TCGTCGTGGAAAAGAAATTG+TGG | - | chr5_1:10705496-10705515 | None:intergenic | 40.0% | |
| ! | CAATTTCTTTTCCACGACGA+AGG | + | chr5_1:10705496-10705515 | Msa0717120:CDS | 40.0% |
| GAGGAAGATTCAGATGAGAA+TGG | - | chr5_1:10705585-10705604 | None:intergenic | 40.0% | |
| ! | TTTTGTAACCTTCTTCTCCG+TGG | - | chr5_1:10705612-10705631 | None:intergenic | 40.0% |
| AAAAATGACGATTTGCGCCT+TGG | + | chr5_1:10705628-10705647 | Msa0717120:CDS | 40.0% | |
| AGATCATTGAAAATGGGTCG+TGG | + | chr5_1:10703605-10703624 | Msa0717120:exon | 40.0% | |
| GATCATTGAAAATGGGTCGT+GGG | + | chr5_1:10703606-10703625 | Msa0717120:exon | 40.0% | |
| ! | TATGTCACTTGCCTGTTAGT+AGG | - | chr5_1:10703659-10703678 | None:intergenic | 40.0% |
| TAGTACTTACGTTAGTCCAG+GGG | - | chr5_1:10703795-10703814 | None:intergenic | 40.0% | |
| GATAGTACTTACGTTAGTCC+AGG | - | chr5_1:10703797-10703816 | None:intergenic | 40.0% | |
| ! | GAAAAGGCATAGAATAGGTG+AGG | + | chr5_1:10704187-10704206 | Msa0717120:intron | 40.0% |
| ! | GACCTTTTTCCTACAGGTAT+CGG | - | chr5_1:10705021-10705040 | None:intergenic | 40.0% |
| ! | ATTGCTGACCTTTTTCCTAC+AGG | - | chr5_1:10705027-10705046 | None:intergenic | 40.0% |
| GTTAGAGACGTCAAATTTGG+TGG | + | chr5_1:10705286-10705305 | Msa0717120:intron | 40.0% | |
| CGTGGAAAAGAAATTGTGGA+TGG | - | chr5_1:10705492-10705511 | None:intergenic | 40.0% | |
| TCGTCGTGGAAAAGAAATTG+TGG | - | chr5_1:10705496-10705515 | None:intergenic | 40.0% | |
| ! | CAATTTCTTTTCCACGACGA+AGG | + | chr5_1:10705496-10705515 | Msa0717120:CDS | 40.0% |
| GAGGAAGATTCAGATGAGAA+TGG | - | chr5_1:10705585-10705604 | None:intergenic | 40.0% | |
| ! | TTTTGTAACCTTCTTCTCCG+TGG | - | chr5_1:10705612-10705631 | None:intergenic | 40.0% |
| AAAAATGACGATTTGCGCCT+TGG | + | chr5_1:10705628-10705647 | Msa0717120:CDS | 40.0% | |
| ! | CTTTGGGGGATATAGATCTG+TGG | + | chr5_1:10703945-10703964 | Msa0717120:CDS | 45.0% |
| TAGAATAGGTGAGGGTGGTA+TGG | + | chr5_1:10704196-10704215 | Msa0717120:CDS | 45.0% | |
| TACGCAGTTGCTGAAAGCTA+AGG | - | chr5_1:10704232-10704251 | None:intergenic | 45.0% | |
| GACCGATACCTGTAGGAAAA+AGG | + | chr5_1:10705016-10705035 | Msa0717120:CDS | 45.0% | |
| AGAAGCTTGGAGCAGATGAA+TGG | + | chr5_1:10705145-10705164 | Msa0717120:CDS | 45.0% | |
| ACAGAATGCATACAGAGTGG+AGG | - | chr5_1:10705557-10705576 | None:intergenic | 45.0% | |
| CTGACAGAATGCATACAGAG+TGG | - | chr5_1:10705560-10705579 | None:intergenic | 45.0% | |
| CTGAATCTTCCTCATCACCA+CGG | + | chr5_1:10705592-10705611 | Msa0717120:CDS | 45.0% | |
| TGGTTCCAAACTCTCCATCT+AGG | + | chr5_1:10705793-10705812 | Msa0717120:three_prime_UTR | 45.0% | |
| CTCTACCTAGATGGAGAGTT+TGG | - | chr5_1:10705801-10705820 | None:intergenic | 45.0% | |
| ! | CTTTGGGGGATATAGATCTG+TGG | + | chr5_1:10703945-10703964 | Msa0717120:CDS | 45.0% |
| TAGAATAGGTGAGGGTGGTA+TGG | + | chr5_1:10704196-10704215 | Msa0717120:CDS | 45.0% | |
| TACGCAGTTGCTGAAAGCTA+AGG | - | chr5_1:10704232-10704251 | None:intergenic | 45.0% | |
| GACCGATACCTGTAGGAAAA+AGG | + | chr5_1:10705016-10705035 | Msa0717120:CDS | 45.0% | |
| AGAAGCTTGGAGCAGATGAA+TGG | + | chr5_1:10705145-10705164 | Msa0717120:CDS | 45.0% | |
| ACAGAATGCATACAGAGTGG+AGG | - | chr5_1:10705557-10705576 | None:intergenic | 45.0% | |
| CTGACAGAATGCATACAGAG+TGG | - | chr5_1:10705560-10705579 | None:intergenic | 45.0% | |
| CTGAATCTTCCTCATCACCA+CGG | + | chr5_1:10705592-10705611 | Msa0717120:CDS | 45.0% | |
| TGGTTCCAAACTCTCCATCT+AGG | + | chr5_1:10705793-10705812 | Msa0717120:three_prime_UTR | 45.0% | |
| CTCTACCTAGATGGAGAGTT+TGG | - | chr5_1:10705801-10705820 | None:intergenic | 45.0% | |
| !! | GTATATATATAAATAATATA+AGG | - | chr5_1:10703825-10703844 | None:intergenic | 5.0% |
| !! | GTATATATATAAATAATATA+AGG | - | chr5_1:10703825-10703844 | None:intergenic | 5.0% |
| ATGCATGAGTACATCACCCC+TGG | + | chr5_1:10703776-10703795 | Msa0717120:CDS | 50.0% | |
| TCTGTGGCGTTCTCACTATG+AGG | + | chr5_1:10703961-10703980 | Msa0717120:CDS | 50.0% | |
| AGGCATAGAATAGGTGAGGG+TGG | + | chr5_1:10704191-10704210 | Msa0717120:intron | 50.0% | |
| AGGTGAGGGTGGTATGGAAT+TGG | + | chr5_1:10704202-10704221 | Msa0717120:CDS | 50.0% | |
| ! | GCAACTGCGTAGTCTTGAAG+AGG | + | chr5_1:10704241-10704260 | Msa0717120:CDS | 50.0% |
| AAACTCGGACCGATACCTGT+AGG | + | chr5_1:10705009-10705028 | Msa0717120:CDS | 50.0% | |
| CGAGGAATCAGCAGTTGCAT+TGG | + | chr5_1:10705522-10705541 | Msa0717120:CDS | 50.0% | |
| ! | TCAGCAGTTGCATTGGCCAA+TGG | + | chr5_1:10705529-10705548 | Msa0717120:CDS | 50.0% |
| !! | ATACAGAGTGGAGGCACCAT+TGG | - | chr5_1:10705548-10705567 | None:intergenic | 50.0% |
| ATGCATGAGTACATCACCCC+TGG | + | chr5_1:10703776-10703795 | Msa0717120:CDS | 50.0% | |
| TCTGTGGCGTTCTCACTATG+AGG | + | chr5_1:10703961-10703980 | Msa0717120:CDS | 50.0% | |
| AGGCATAGAATAGGTGAGGG+TGG | + | chr5_1:10704191-10704210 | Msa0717120:intron | 50.0% | |
| AGGTGAGGGTGGTATGGAAT+TGG | + | chr5_1:10704202-10704221 | Msa0717120:CDS | 50.0% | |
| ! | GCAACTGCGTAGTCTTGAAG+AGG | + | chr5_1:10704241-10704260 | Msa0717120:CDS | 50.0% |
| AAACTCGGACCGATACCTGT+AGG | + | chr5_1:10705009-10705028 | Msa0717120:CDS | 50.0% | |
| CGAGGAATCAGCAGTTGCAT+TGG | + | chr5_1:10705522-10705541 | Msa0717120:CDS | 50.0% | |
| ! | TCAGCAGTTGCATTGGCCAA+TGG | + | chr5_1:10705529-10705548 | Msa0717120:CDS | 50.0% |
| !! | ATACAGAGTGGAGGCACCAT+TGG | - | chr5_1:10705548-10705567 | None:intergenic | 50.0% |
| TTTCCACGACGAAGGAGACG+AGG | + | chr5_1:10705504-10705523 | Msa0717120:CDS | 55.0% | |
| ATTCCTCGTCTCCTTCGTCG+TGG | - | chr5_1:10705510-10705529 | None:intergenic | 55.0% | |
| ! | CCTTCTTCTCCGTGGTGATG+AGG | - | chr5_1:10705604-10705623 | None:intergenic | 55.0% |
| CCTCATCACCACGGAGAAGA+AGG | + | chr5_1:10705601-10705620 | Msa0717120:CDS | 55.0% | |
| TTTCCACGACGAAGGAGACG+AGG | + | chr5_1:10705504-10705523 | Msa0717120:CDS | 55.0% | |
| ATTCCTCGTCTCCTTCGTCG+TGG | - | chr5_1:10705510-10705529 | None:intergenic | 55.0% | |
| ! | CCTTCTTCTCCGTGGTGATG+AGG | - | chr5_1:10705604-10705623 | None:intergenic | 55.0% |
| CCTCATCACCACGGAGAAGA+AGG | + | chr5_1:10705601-10705620 | Msa0717120:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 10703534 | 10705864 | 10703534 | ID=Msa0717120;Name=Msa0717120 |
| chr5_1 | mRNA | 10703534 | 10705864 | 10703534 | ID=Msa0717120-mRNA-1;Parent=Msa0717120;Name=Msa0717120-mRNA-1;_AED=0.07;_eAED=0.07;_QI=83|1|1|1|1|1|7|210|232 |
| chr5_1 | exon | 10703534 | 10703804 | 10703534 | ID=Msa0717120-mRNA-1:exon:4398;Parent=Msa0717120-mRNA-1 |
| chr5_1 | exon | 10703913 | 10703982 | 10703913 | ID=Msa0717120-mRNA-1:exon:4399;Parent=Msa0717120-mRNA-1 |
| chr5_1 | exon | 10704051 | 10704112 | 10704051 | ID=Msa0717120-mRNA-1:exon:4400;Parent=Msa0717120-mRNA-1 |
| chr5_1 | exon | 10704193 | 10704301 | 10704193 | ID=Msa0717120-mRNA-1:exon:4401;Parent=Msa0717120-mRNA-1 |
| chr5_1 | exon | 10704996 | 10705037 | 10704996 | ID=Msa0717120-mRNA-1:exon:4402;Parent=Msa0717120-mRNA-1 |
| chr5_1 | exon | 10705142 | 10705186 | 10705142 | ID=Msa0717120-mRNA-1:exon:4403;Parent=Msa0717120-mRNA-1 |
| chr5_1 | exon | 10705472 | 10705864 | 10705472 | ID=Msa0717120-mRNA-1:exon:4404;Parent=Msa0717120-mRNA-1 |
| chr5_1 | five_prime_UTR | 10703534 | 10703616 | 10703534 | ID=Msa0717120-mRNA-1:five_prime_utr;Parent=Msa0717120-mRNA-1 |
| chr5_1 | CDS | 10703617 | 10703804 | 10703617 | ID=Msa0717120-mRNA-1:cds;Parent=Msa0717120-mRNA-1 |
| chr5_1 | CDS | 10703913 | 10703982 | 10703913 | ID=Msa0717120-mRNA-1:cds;Parent=Msa0717120-mRNA-1 |
| chr5_1 | CDS | 10704051 | 10704112 | 10704051 | ID=Msa0717120-mRNA-1:cds;Parent=Msa0717120-mRNA-1 |
| chr5_1 | CDS | 10704193 | 10704301 | 10704193 | ID=Msa0717120-mRNA-1:cds;Parent=Msa0717120-mRNA-1 |
| chr5_1 | CDS | 10704996 | 10705037 | 10704996 | ID=Msa0717120-mRNA-1:cds;Parent=Msa0717120-mRNA-1 |
| chr5_1 | CDS | 10705142 | 10705186 | 10705142 | ID=Msa0717120-mRNA-1:cds;Parent=Msa0717120-mRNA-1 |
| chr5_1 | CDS | 10705472 | 10705654 | 10705472 | ID=Msa0717120-mRNA-1:cds;Parent=Msa0717120-mRNA-1 |
| chr5_1 | three_prime_UTR | 10705655 | 10705864 | 10705655 | ID=Msa0717120-mRNA-1:three_prime_utr;Parent=Msa0717120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
