AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0731540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0731540 MtrunA17_Chr5g0425571 98.806 335 4 0 2 336 1 335 0.0 699
Msa0731540 MtrunA17_Chr4g0050511 67.062 337 109 1 2 338 1 335 0.0 512
Msa0731540 MtrunA17_Chr3g0120271 33.154 371 200 6 9 371 7 337 2.79e-60 198
Msa0731540 MtrunA17_Chr4g0041801 38.318 107 65 1 7 112 5 111 3.41e-16 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0731540 AT1G36050.2 80.000 335 67 0 2 336 1 335 0.0 598
Msa0731540 AT1G36050.1 80.000 335 67 0 2 336 1 335 0.0 598
Msa0731540 AT1G22200.1 76.418 335 79 0 2 336 1 335 0.0 565
Msa0731540 AT1G22200.2 76.418 335 79 0 2 336 1 335 0.0 565
Msa0731540 AT3G22290.2 33.690 374 200 11 5 371 3 335 5.21e-60 197
Msa0731540 AT3G22290.1 33.690 374 200 11 5 371 3 335 5.21e-60 197
Msa0731540 AT3G20560.1 40.187 107 63 1 8 113 6 112 8.07e-18 85.1
Msa0731540 AT1G50950.2 39.815 108 64 1 7 113 5 112 5.71e-17 82.4
Msa0731540 AT1G50950.1 39.815 108 64 1 7 113 5 112 6.35e-17 82.4
Msa0731540 AT4G27080.1 37.963 108 66 1 7 113 5 112 2.95e-16 80.5
Msa0731540 AT4G27080.2 38.614 101 61 1 14 113 64 164 6.15e-14 73.6

Find 92 sgRNAs with CRISPR-Local

Find 897 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTATAGTCGCACTCTTTC+TGG 0.133582 5_1:-42561317 Msa0731540:CDS
AGCAAATCTCAAACAAAATT+TGG 0.156381 5_1:-42561505 Msa0731540:five_prime_UTR
CTACGACCTTTCTCCAATTA+AGG 0.195998 5_1:-42550071 Msa0731540:intron
TCATAATCATAATCAAAATT+AGG 0.222925 5_1:-42561426 Msa0731540:five_prime_UTR
ATTACGAAGCTTGTTCATTA+TGG 0.253518 5_1:+42561370 None:intergenic
TCTTCTTCTTGATAGCCTTT+TGG 0.307819 5_1:+42549613 None:intergenic
GCTGTTGTTGGAGTACTTTC+CGG 0.321260 5_1:-42549542 None:intergenic
GGCCGATTGCAGTCCCTCCC+TGG 0.324323 5_1:-42550106 Msa0731540:CDS
AGCACATACCTTGCTGTTGT+TGG 0.341824 5_1:-42549554 Msa0731540:CDS
TCTCTGTGACAGAACACTTT+AGG 0.345410 5_1:-42550141 Msa0731540:CDS
GAACGGGGCGTTTCGCGATT+TGG 0.352631 5_1:+42561538 None:intergenic
AAACAAAATTTGGATTGAAC+GGG 0.358155 5_1:-42561495 Msa0731540:five_prime_UTR
TTAGATTCATTTATCTATCA+TGG 0.373404 5_1:-42549636 Msa0731540:intron
TACCGCCTCAGCACCATAAC+AGG 0.379587 5_1:+42559261 None:intergenic
TTGAGATTTGCTCTATCAAC+TGG 0.383095 5_1:+42561516 None:intergenic
TTTGCTCTATCAACTGGAAC+GGG 0.387685 5_1:+42561522 None:intergenic
GCCGATTGCAGTCCCTCCCT+GGG 0.388413 5_1:-42550105 Msa0731540:CDS
GGGAAAAGCTTTCAGCAATC+TGG 0.414672 5_1:-42555486 Msa0731540:CDS
CCCCAGGGAGGGACTGCAAT+CGG 0.422047 5_1:+42550104 None:intergenic
CAAACCTGGTCAATTGAATC+CGG 0.433588 5_1:+42557971 None:intergenic
GATCAATAACCTGGTTTGAC+TGG 0.437886 5_1:+42550239 None:intergenic
ACTTATTGCGGATCCTGTTA+TGG 0.450203 5_1:-42559274 Msa0731540:CDS
TTCGATTTCGATCTTCATGA+TGG 0.458620 5_1:-42561396 Msa0731540:exon
TTGGAAGTAAACAAGGTGGC+AGG 0.459413 5_1:-42555528 Msa0731540:CDS
CGTACATGTGCATGACCTGC+TGG 0.468545 5_1:-42555463 Msa0731540:CDS
CTGCCTCCATGTCTTTGCAA+GGG 0.472630 5_1:+42559313 None:intergenic
GAAAAGCAAGAGCATGAGAA+TGG 0.476070 5_1:+42561271 None:intergenic
CACATCAACAGAATAGCCTT+TGG 0.482453 5_1:-42553067 Msa0731540:CDS
CCTGCCTCCATGTCTTTGCA+AGG 0.483999 5_1:+42559312 None:intergenic
CATTAGCGGAGAACAACATC+TGG 0.491394 5_1:-42559919 Msa0731540:CDS
GAAAGAGAAATTACGAAGCT+CGG 0.495749 5_1:+42561244 None:intergenic
GAAAGAATCAAGGAAGAAGA+AGG 0.501222 5_1:-42555576 Msa0731540:CDS
CAAACAAAATTTGGATTGAA+CGG 0.501951 5_1:-42561496 Msa0731540:five_prime_UTR
AAGCATATCGAAAGAAAGGT+TGG 0.504184 5_1:-42558006 Msa0731540:CDS
CGTGAAGCATATCGAAAGAA+AGG 0.504663 5_1:-42558010 Msa0731540:CDS
GAAACAAGGCAAGATGGAAT+CGG 0.513498 5_1:-42559729 Msa0731540:CDS
ATTTATCTATCATGGCCAAA+AGG 0.514131 5_1:-42549628 Msa0731540:CDS
TTTCGCGATTTGGTTGAAGC+AGG 0.527853 5_1:+42561548 None:intergenic
GTGATAGAAACAAGGCAAGA+TGG 0.530527 5_1:-42559735 Msa0731540:CDS
TCTTGATTATCAGTGTGCAT+TGG 0.532026 5_1:-42552923 Msa0731540:intron
AAAACACCTTAATTGGAGAA+AGG 0.535317 5_1:+42550065 None:intergenic
AAAGGCTATCAAGAAGAAGA+TGG 0.538983 5_1:-42549610 Msa0731540:CDS
TTGTTCTCCGCTAATGTCCA+TGG 0.540332 5_1:+42559926 None:intergenic
CTCGATGCCATGGACATTAG+CGG 0.540952 5_1:-42559933 Msa0731540:CDS
GTCAAGAGGGTTTACAACAC+CGG 0.543744 5_1:+42553033 None:intergenic
CTCACGTCAGTGTACATAGT+TGG 0.544532 5_1:+42550274 None:intergenic
ATCACTTAGTGCAAAAGAGA+AGG 0.545278 5_1:-42555606 Msa0731540:intron
AGGGTTCTTAGAAAGAATCA+AGG 0.554292 5_1:-42555586 Msa0731540:CDS
AAAATACTGATACATCCCAC+TGG 0.555074 5_1:+42552887 None:intergenic
AGCATATCGAAAGAAAGGTT+GGG 0.557532 5_1:-42558005 Msa0731540:CDS
CCTTGCAAAGACATGGAGGC+AGG 0.557759 5_1:-42559312 Msa0731540:CDS
AGGCTATTCTGTTGATGTGG+TGG 0.558845 5_1:+42553071 None:intergenic
AGTATAGAACACGCTAGTGC+AGG 0.559960 5_1:+42559960 None:intergenic
TATACTTAGTCTCGATGCCA+TGG 0.561660 5_1:-42559943 Msa0731540:CDS
GGTGAAGGATGCAATGTGTA+TGG 0.569301 5_1:-42555555 Msa0731540:CDS
GTGTTGTAAACCCTCTTGAC+CGG 0.574958 5_1:-42553030 Msa0731540:intron
AGGTTGGGCACTCTCAAGCC+CGG 0.575134 5_1:-42557990 Msa0731540:CDS
AAACCTGGTCAATTGAATCC+GGG 0.575289 5_1:+42557972 None:intergenic
AAGCCCGGATTCAATTGACC+AGG 0.575812 5_1:-42557975 Msa0731540:intron
ATCAAGGAAGAAGAAGGTGA+AGG 0.577027 5_1:-42555570 Msa0731540:CDS
AAGAAAAGAATAGACTCTCA+TGG 0.579216 5_1:-42559762 Msa0731540:CDS
CAAAGGCTATTCTGTTGATG+TGG 0.582521 5_1:+42553068 None:intergenic
TAAAGAGCTCACCGGTCAAG+AGG 0.585229 5_1:+42553019 None:intergenic
TCAAGAGGGTTTACAACACC+GGG 0.589163 5_1:+42553034 None:intergenic
TGCTTCACGAACTTCCTCAC+AGG 0.590612 5_1:+42558024 None:intergenic
TCACTTAGTGCAAAAGAGAA+GGG 0.593153 5_1:-42555605 Msa0731540:intron
TGGAAGTAAACAAGGTGGCA+GGG 0.593479 5_1:-42555527 Msa0731540:CDS
ATCAAGAAGAAGATGGAACT+CGG 0.594892 5_1:-42549603 Msa0731540:CDS
TTTGCGCTTGCAGTCAGATG+AGG 0.596325 5_1:-42558059 Msa0731540:intron
CACTTTAGGACGGCAGATGT+AGG 0.596476 5_1:-42550127 Msa0731540:CDS
CTTGTTGTAGATACTTCTAG+AGG 0.598128 5_1:-42561108 Msa0731540:CDS
GAGCACAATGAGACTTATTG+CGG 0.606344 5_1:-42559286 Msa0731540:CDS
CTATGTACACTGACGTGAGT+GGG 0.606656 5_1:-42550270 Msa0731540:CDS
ATTTGCTCTATCAACTGGAA+CGG 0.609514 5_1:+42561521 None:intergenic
AAAGAGCTCACCGGTCAAGA+GGG 0.621153 5_1:+42553020 None:intergenic
ATCCTGTTATGGTGCTGAGG+CGG 0.626803 5_1:-42559263 Msa0731540:intron
TATAGTCGCACTCTTTCTGG+CGG 0.635746 5_1:-42561314 Msa0731540:CDS
GAACACTATCCAGTCAAACC+AGG 0.636074 5_1:-42550248 Msa0731540:intron
ACCGGGAAAATAGTCTCCAA+AGG 0.641478 5_1:+42553051 None:intergenic
CGGATCCTGTTATGGTGCTG+AGG 0.643851 5_1:-42559266 Msa0731540:CDS
AACAAAATTTGGATTGAACG+GGG 0.658205 5_1:-42561494 Msa0731540:five_prime_UTR
AAATACTGATACATCCCACT+GGG 0.661329 5_1:+42552888 None:intergenic
TGTGACAGAACACTTTAGGA+CGG 0.663702 5_1:-42550137 Msa0731540:CDS
ACTATGTACACTGACGTGAG+TGG 0.665706 5_1:-42550271 Msa0731540:CDS
AAAGTACTCCAACAACAGCA+AGG 0.667437 5_1:+42549546 None:intergenic
CCGATTGCAGTCCCTCCCTG+GGG 0.667693 5_1:-42550104 Msa0731540:CDS
TTGCTCTATCAACTGGAACG+GGG 0.676838 5_1:+42561523 None:intergenic
ATGGCAATGTGATAGAAACA+AGG 0.687509 5_1:-42559743 Msa0731540:CDS
AAACCCTTGCAAAGACATGG+AGG 0.692409 5_1:-42559316 Msa0731540:CDS
GGACACAAGAAACACCCAGT+GGG 0.693082 5_1:-42552902 Msa0731540:CDS
TGGACACAAGAAACACCCAG+TGG 0.786125 5_1:-42552903 Msa0731540:CDS
GGAATGTTGTAATTCCTGTG+AGG 0.801380 5_1:-42558038 Msa0731540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTAT+AGG - chr5_1:42550329-42550348 Msa0731540:intron 0.0%
!!! TGTTTAAATTTTTATATTGT+TGG - chr5_1:42550062-42550081 Msa0731540:intron 10.0%
!!! AATGCATTTTTATTTTATAT+CGG - chr5_1:42551470-42551489 Msa0731540:intron 10.0%
!!! TTTTTTTTTTTTTTGTACAA+TGG + chr5_1:42552643-42552662 None:intergenic 10.0%
!! AATTCATAATAGTTTAATAT+AGG + chr5_1:42552783-42552802 None:intergenic 10.0%
!!! TTATAATTTTTTCTATTTAG+TGG - chr5_1:42552843-42552862 Msa0731540:intron 10.0%
!!! TATAATTTTTTCTATTTAGT+GGG - chr5_1:42552844-42552863 Msa0731540:intron 10.0%
!! TGTTCAAAAAAAAAAAAAAA+AGG + chr5_1:42554983-42555002 None:intergenic 10.0%
!! CAAAAAAAAAAAAAAATAGA+AGG + chr5_1:42555014-42555033 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTGAAGA+AGG - chr5_1:42555018-42555037 Msa0731540:intron 10.0%
!!! ACTAATTTGTTAAATATAAT+TGG - chr5_1:42555405-42555424 Msa0731540:intron 10.0%
!! TTTGAAAAATAAAGAATTAT+TGG + chr5_1:42559019-42559038 None:intergenic 10.0%
!!! TAATTCTTTATTTTTCAAAA+TGG - chr5_1:42559020-42559039 Msa0731540:intron 10.0%
!!! AATTCTTTATTTTTCAAAAT+GGG - chr5_1:42559021-42559040 Msa0731540:intron 10.0%
!! TAACATTTACATTTAATTAA+TGG - chr5_1:42560285-42560304 Msa0731540:intron 10.0%
!! TCATAATCATAATCAAAATT+AGG - chr5_1:42549693-42549712 Msa0731540:intron 15.0%
!!! TTCATTTTCGTTTTTTTTTT+TGG - chr5_1:42549944-42549963 Msa0731540:intron 15.0%
!!! TCATTTTCGTTTTTTTTTTT+GGG - chr5_1:42549945-42549964 Msa0731540:intron 15.0%
!!! AGTAATAATCTTTTCATTTT+TGG - chr5_1:42551517-42551536 Msa0731540:intron 15.0%
!! TTATAATTATAATAGCTAGA+AGG + chr5_1:42552097-42552116 None:intergenic 15.0%
!!! TAATAGATGATACAATTTTA+TGG - chr5_1:42552203-42552222 Msa0731540:intron 15.0%
!! CAGTTTATTTATATTTATGT+AGG + chr5_1:42552682-42552701 None:intergenic 15.0%
!! TAATAAAAATGCTACTATAA+AGG + chr5_1:42555185-42555204 Msa0731560:CDS 15.0%
!! CTATTTGTAATGAATAATTA+TGG - chr5_1:42555259-42555278 Msa0731540:intron 15.0%
!!! GTTATTTGTTTCTATTAAAT+TGG - chr5_1:42556146-42556165 Msa0731540:intron 15.0%
!! TTCAAAATTTAGTGTATATA+TGG - chr5_1:42558317-42558336 Msa0731540:intron 15.0%
!! TCAAAATTTAGTGTATATAT+GGG - chr5_1:42558318-42558337 Msa0731540:intron 15.0%
!! GAATGAAATAAAATTTAAAC+AGG + chr5_1:42558692-42558711 None:intergenic 15.0%
!!! TAATTGTTTTCATTAAAATC+AGG - chr5_1:42558873-42558892 Msa0731540:intron 15.0%
!!! AATTGTTTTCATTAAAATCA+GGG - chr5_1:42558874-42558893 Msa0731540:intron 15.0%
!!! TACTGATTATTATTTTGATT+TGG + chr5_1:42559302-42559321 None:intergenic 15.0%
!!! GACTTTTCATTTTTAAATTA+CGG - chr5_1:42560403-42560422 Msa0731540:intron 15.0%
!!! AATAAAAAGTGAAAATGTTT+TGG - chr5_1:42560951-42560970 Msa0731540:intron 15.0%
!!! AACTGATTTAGAATTATTTT+TGG + chr5_1:42561188-42561207 None:intergenic 15.0%
!! ATAAGTTAATTATCCAAACA+AGG + chr5_1:42550211-42550230 None:intergenic 20.0%
!! TGTTTGGATAATTAACTTAT+TGG - chr5_1:42550211-42550230 Msa0731540:intron 20.0%
!! AGATTTGAAAATTAATGAGT+TGG - chr5_1:42550594-42550613 Msa0731540:intron 20.0%
!! TACTTTATCTTCTCTTATAA+AGG + chr5_1:42550875-42550894 None:intergenic 20.0%
!! TATAAGAGAAGATAAAGTAA+AGG - chr5_1:42550876-42550895 Msa0731540:intron 20.0%
!! AAATAAGGTGAAAACAATTT+AGG - chr5_1:42550958-42550977 Msa0731540:intron 20.0%
!! GTATGTATAATAGAAAAACT+CGG - chr5_1:42551228-42551247 Msa0731540:intron 20.0%
!! GTTTGTGAAAACTAAATAAA+AGG + chr5_1:42551565-42551584 None:intergenic 20.0%
!!! TTATTTAGTTTTCACAAACT+TGG - chr5_1:42551566-42551585 Msa0731540:intron 20.0%
!!! TTAAAAGACATTTTCTCTTT+AGG - chr5_1:42551603-42551622 Msa0731540:intron 20.0%
!! ATATCAACTAATAAGAAATC+TGG - chr5_1:42551973-42551992 Msa0731540:intron 20.0%
!! TTATGAAAACTTATTTGAGT+TGG - chr5_1:42552018-42552037 Msa0731540:intron 20.0%
!! AACCTATTATGAGATATTTA+TGG - chr5_1:42552158-42552177 Msa0731540:intron 20.0%
!! ATCTATTAAAAATCCAAACT+AGG + chr5_1:42552191-42552210 None:intergenic 20.0%
!! ATAAACTGTTATGACTTATT+TGG - chr5_1:42552694-42552713 Msa0731540:intron 20.0%
!! TAAACTGTTATGACTTATTT+GGG - chr5_1:42552695-42552714 Msa0731540:intron 20.0%
!!! AAAAGTCTTTTTTTTGTACT+CGG + chr5_1:42552722-42552741 None:intergenic 20.0%
!!! TACAAAAAAAAGACTTTTGT+GGG - chr5_1:42552724-42552743 Msa0731540:intron 20.0%
!!! AAAATGTTTTTTATAGGTCT+AGG + chr5_1:42552750-42552769 None:intergenic 20.0%
!!! TAGACCTATAAAAAACATTT+TGG - chr5_1:42552749-42552768 Msa0731540:intron 20.0%
!!! GTAACCAAAATGTTTTTTAT+AGG + chr5_1:42552756-42552775 None:intergenic 20.0%
!! ATCGTTGACAAATATATTAT+GGG - chr5_1:42553225-42553244 Msa0731540:intron 20.0%
!! AAATTGCCTAGAAAAATTAT+CGG - chr5_1:42554256-42554275 Msa0731540:intron 20.0%
!! TTATGTAGTAACATAATAGA+AGG + chr5_1:42555050-42555069 Msa0731560:CDS 20.0%
!! TACAAACTAATGATTGTTTA+CGG + chr5_1:42555231-42555250 Msa0731560:CDS 20.0%
!! TACAATATGAATAAAACAGA+TGG + chr5_1:42556071-42556090 None:intergenic 20.0%
!!! GTTTTATTCATATTGTATAG+AGG - chr5_1:42556074-42556093 Msa0731540:intron 20.0%
!!! CTTCATAAGTATTCAATTTT+AGG - chr5_1:42556750-42556769 Msa0731540:intron 20.0%
!! TAATTTGGGAAAAATGAAAA+GGG - chr5_1:42557100-42557119 Msa0731540:intron 20.0%
!! AAAGTGAGGAATATAAAATA+TGG - chr5_1:42557277-42557296 Msa0731540:intron 20.0%
!!! GAAATTATAACAAAAAGTAC+AGG - chr5_1:42557613-42557632 Msa0731540:intron 20.0%
!!! GATGTATCAGTATTTTATAA+AGG - chr5_1:42558239-42558258 Msa0731540:intron 20.0%
!! GAAAACAATTAAATCTTTGA+CGG + chr5_1:42558864-42558883 None:intergenic 20.0%
!! GGAGATAGAATTTAATAATT+GGG + chr5_1:42559401-42559420 None:intergenic 20.0%
!! AGGAGATAGAATTTAATAAT+TGG + chr5_1:42559402-42559421 None:intergenic 20.0%
!! AACAATCGAAAAAATGAAAA+TGG + chr5_1:42559731-42559750 None:intergenic 20.0%
!! TTGATAAAAGGAAAAAACAT+GGG + chr5_1:42559897-42559916 None:intergenic 20.0%
!! ATTGATAAAAGGAAAAAACA+TGG + chr5_1:42559898-42559917 None:intergenic 20.0%
!! TTTAAAAATACATACAGCTA+GGG + chr5_1:42560105-42560124 None:intergenic 20.0%
!!! TTTTAAAAATACATACAGCT+AGG + chr5_1:42560106-42560125 None:intergenic 20.0%
!!! AAAACATACTATAGTTTTAC+TGG + chr5_1:42560775-42560794 None:intergenic 20.0%
!! AATAAGAAAAACACCTTAAT+TGG + chr5_1:42561064-42561083 None:intergenic 20.0%
!! TTAGATTCATTTATCTATCA+TGG - chr5_1:42561483-42561502 Msa0731540:five_prime_UTR 20.0%
! AGCAAATCTCAAACAAAATT+TGG - chr5_1:42549614-42549633 Msa0731540:CDS 25.0%
! CAAACAAAATTTGGATTGAA+CGG - chr5_1:42549623-42549642 Msa0731540:CDS 25.0%
! AAACAAAATTTGGATTGAAC+GGG - chr5_1:42549624-42549643 Msa0731540:CDS 25.0%
!!! TAGAAATCTTCGTTGATTTT+AGG + chr5_1:42549787-42549806 None:intergenic 25.0%
! TGCATAAAAAAAAAAGACGA+TGG + chr5_1:42549908-42549927 None:intergenic 25.0%
! ATTGTGAATTTGTGATGTTA+TGG - chr5_1:42550119-42550138 Msa0731540:CDS 25.0%
!! GAACTATAGATTTTGTAGTA+AGG - chr5_1:42550499-42550518 Msa0731540:intron 25.0%
!!! AGCTTTTTCATTAGATATCT+TGG - chr5_1:42550723-42550742 Msa0731540:intron 25.0%
! GAAGATAAAGTAAAGGTAAA+TGG - chr5_1:42550883-42550902 Msa0731540:intron 25.0%
! TCAAATAAGTAAATCCAAAC+AGG - chr5_1:42551050-42551069 Msa0731540:intron 25.0%
! TTTCAACATCAAAACAACAA+TGG + chr5_1:42551118-42551137 None:intergenic 25.0%
!! TTTGGTTTCTATATATCACA+TGG - chr5_1:42551535-42551554 Msa0731540:intron 25.0%
!!! GGAAGTGATTTTTTTATCAA+TGG - chr5_1:42551624-42551643 Msa0731540:intron 25.0%
! ATATAACATCCTTATCCTTA+TGG + chr5_1:42551886-42551905 None:intergenic 25.0%
! AAATGTTCATAGAAAACTGT+AGG - chr5_1:42552133-42552152 Msa0731540:intron 25.0%
! AGCCATAAATATCTCATAAT+AGG + chr5_1:42552163-42552182 None:intergenic 25.0%
! ATTTATATTTATGTAGGTCC+AGG + chr5_1:42552676-42552695 None:intergenic 25.0%
!!! AAAGTCTTTTTTTTGTACTC+GGG + chr5_1:42552721-42552740 None:intergenic 25.0%
!! GTACAAAAAAAAGACTTTTG+TGG - chr5_1:42552723-42552742 Msa0731540:intron 25.0%
!! ATTAAGTTTTTCCCATTACA+TGG + chr5_1:42552962-42552981 None:intergenic 25.0%
! CATCGTTGACAAATATATTA+TGG - chr5_1:42553224-42553243 Msa0731540:intron 25.0%
! GTACTTATAAACTGTATACT+TGG + chr5_1:42553302-42553321 None:intergenic 25.0%
! GTATTATAAATAAGATGCAG+AGG - chr5_1:42553503-42553522 Msa0731540:intron 25.0%
! GTATTATAAATAAGATGCAG+AGG - chr5_1:42553503-42553522 Msa0731540:intron 25.0%
! ATAAAGGAAACAAGATTTGT+CGG + chr5_1:42555169-42555188 Msa0731560:CDS 25.0%
!!! ACAATCATTAGTTTGTAATG+CGG - chr5_1:42555234-42555253 Msa0731540:intron 25.0%
! TAAGATTAACTCCTTGTAAA+TGG + chr5_1:42555291-42555310 None:intergenic 25.0%
!! TTACTTGTGTTTTCAAAGAA+TGG - chr5_1:42555331-42555350 Msa0731540:intron 25.0%
! ACCTTCAATTTATATATGCA+TGG - chr5_1:42555374-42555393 Msa0731540:intron 25.0%
! TCCATGCATATATAAATTGA+AGG + chr5_1:42555378-42555397 None:intergenic 25.0%
! ATATACAAGTTATACAGACA+GGG + chr5_1:42555451-42555470 None:intergenic 25.0%
!! ATATGATTTTTGTTCTCAGA+TGG - chr5_1:42555712-42555731 Msa0731540:intron 25.0%
! TAGAATTAATGACAAACAGA+TGG + chr5_1:42556102-42556121 None:intergenic 25.0%
! TACTGGTACTATTAAATGAA+TGG - chr5_1:42556193-42556212 Msa0731540:intron 25.0%
! GTTGAAGAACAAATAATTAC+TGG - chr5_1:42556428-42556447 Msa0731540:intron 25.0%
! TTGTCTGGATATAGAATAAT+TGG - chr5_1:42556931-42556950 Msa0731540:intron 25.0%
! AAAGAGGAAGAAAAGTAATT+TGG - chr5_1:42557085-42557104 Msa0731540:intron 25.0%
! AAGAGGAAGAAAAGTAATTT+GGG - chr5_1:42557086-42557105 Msa0731540:intron 25.0%
! GTAATTTGGGAAAAATGAAA+AGG - chr5_1:42557099-42557118 Msa0731540:intron 25.0%
! ACAGCAAAATAAATTCTCTA+GGG + chr5_1:42557479-42557498 None:intergenic 25.0%
!! ATTATAACAAAAAGTACAGG+TGG - chr5_1:42557616-42557635 Msa0731540:intron 25.0%
!!! GTTTTATTCATCTTGTATAG+AGG - chr5_1:42557842-42557861 Msa0731540:intron 25.0%
! AGAATGATAAGTGAAACTAT+TGG + chr5_1:42557901-42557920 None:intergenic 25.0%
! TCTTAAAATATGATGACTGA+TGG + chr5_1:42557999-42558018 None:intergenic 25.0%
! ACTGATAATCAAGAAAATGT+TGG + chr5_1:42558190-42558209 None:intergenic 25.0%
! AATAACAAAGTTACAAATGG+TGG + chr5_1:42558395-42558414 None:intergenic 25.0%
! AGCAATAACAAAGTTACAAA+TGG + chr5_1:42558398-42558417 None:intergenic 25.0%
!!! AACTTTGTTATTGCTTCTAT+TGG - chr5_1:42558403-42558422 Msa0731540:intron 25.0%
! GTTGCATTTGTAACAATTTA+CGG - chr5_1:42558467-42558486 Msa0731540:intron 25.0%
!! CTATTAGTGATGAAACTTTT+TGG - chr5_1:42558564-42558583 Msa0731540:intron 25.0%
! TCTTTCTATATATCCTCTAT+GGG - chr5_1:42558721-42558740 Msa0731540:intron 25.0%
! TACTCAATTATGTTCAATTG+TGG + chr5_1:42558967-42558986 None:intergenic 25.0%
! TAAGAAGTGAATATTAGTGA+TGG - chr5_1:42559193-42559212 Msa0731540:intron 25.0%
! AAGACTTAATCCCTATTTAT+AGG - chr5_1:42559248-42559267 Msa0731540:intron 25.0%
! AGACTTAATCCCTATTTATA+GGG - chr5_1:42559249-42559268 Msa0731540:intron 25.0%
!!! AAAGAGTATCCCTATAAATA+GGG + chr5_1:42559261-42559280 None:intergenic 25.0%
!!! TTTTGATTTGGTCTTGATTT+AGG + chr5_1:42559290-42559309 None:intergenic 25.0%
!!! TGAGATTTGAGTTTGTTATT+AGG + chr5_1:42559338-42559357 None:intergenic 25.0%
! AAATGTAAATGTAGTGCTAA+TGG - chr5_1:42559558-42559577 Msa0731540:intron 25.0%
! AATGTAAATGTAGTGCTAAT+GGG - chr5_1:42559559-42559578 Msa0731540:intron 25.0%
!!! ATGGTATCTGTTTTATTTGA+TGG + chr5_1:42559712-42559731 None:intergenic 25.0%
! ACATGTGAGAAATTGATAAA+AGG + chr5_1:42559909-42559928 None:intergenic 25.0%
! TTTATCAATTTCTCACATGT+AGG - chr5_1:42559909-42559928 Msa0731540:intron 25.0%
! GTTGTTGCTAAATGATAATA+GGG + chr5_1:42560019-42560038 None:intergenic 25.0%
! TGTTGTTGCTAAATGATAAT+AGG + chr5_1:42560020-42560039 None:intergenic 25.0%
! ATTATTACAGGCAATATCTT+TGG + chr5_1:42560175-42560194 None:intergenic 25.0%
! TAATTAATGGTTCATCTGTA+AGG - chr5_1:42560298-42560317 Msa0731540:intron 25.0%
! ACATTATAAGATCAATAACC+TGG + chr5_1:42560892-42560911 None:intergenic 25.0%
! CCAATATAATGCAATATCAA+AGG + chr5_1:42561230-42561249 None:intergenic 25.0%
! CCTTTGATATTGCATTATAT+TGG - chr5_1:42561227-42561246 Msa0731540:intron 25.0%
AACAAAATTTGGATTGAACG+GGG - chr5_1:42549625-42549644 Msa0731540:CDS 30.0%
! ATTACGAAGCTTGTTCATTA+TGG + chr5_1:42549752-42549771 None:intergenic 30.0%
!!! TTTTTTTTGGGTGCTGTTTT+AGG - chr5_1:42549957-42549976 Msa0731540:intron 30.0%
!!! TTTTTTTGGGTGCTGTTTTA+GGG - chr5_1:42549958-42549977 Msa0731540:intron 30.0%
!!! AGCTATTTTTAGACCTTGTT+TGG - chr5_1:42550195-42550214 Msa0731540:intron 30.0%
TACCTCAACTCTTTCTAATA+TGG + chr5_1:42550418-42550437 None:intergenic 30.0%
TTCTATCATACACCATACTT+TGG + chr5_1:42550621-42550640 None:intergenic 30.0%
TGGTGTATGATAGAACATTA+TGG - chr5_1:42550626-42550645 Msa0731540:intron 30.0%
TGTGAAAACAAGCTGAAAAA+AGG - chr5_1:42550752-42550771 Msa0731540:intron 30.0%
!! TAAGTTTTGTCAGACTGTTT+GGG + chr5_1:42550814-42550833 None:intergenic 30.0%
!! ATAAGTTTTGTCAGACTGTT+TGG + chr5_1:42550815-42550834 None:intergenic 30.0%
GCTTATTTAAGCTTATCTAG+TGG + chr5_1:42550839-42550858 None:intergenic 30.0%
TGTATAATAGAAAAACTCGG+TGG - chr5_1:42551231-42551250 Msa0731540:intron 30.0%
! ATGAGAGTCTATTCTTTTCT+TGG + chr5_1:42551358-42551377 None:intergenic 30.0%
AAGAAAAGAATAGACTCTCA+TGG - chr5_1:42551357-42551376 Msa0731540:intron 30.0%
TAAACCACATTACTTACGTT+GGG + chr5_1:42551420-42551439 None:intergenic 30.0%
CACAACTAGAACGATATTAA+GGG + chr5_1:42551694-42551713 None:intergenic 30.0%
CAGCAATCAATACATAAACA+AGG + chr5_1:42551924-42551943 None:intergenic 30.0%
! TGGATAAACAGCTTTTAACA+AGG - chr5_1:42552038-42552057 Msa0731540:intron 30.0%
TTATGGCTAAATACCTAGTT+TGG - chr5_1:42552175-42552194 Msa0731540:intron 30.0%
! ATGATACAATTTTATGGCGT+TGG - chr5_1:42552209-42552228 Msa0731540:intron 30.0%
TTCTTTCATCTATACAACCT+GGG + chr5_1:42552480-42552499 None:intergenic 30.0%
TTTCTTTCATCTATACAACC+TGG + chr5_1:42552481-42552500 None:intergenic 30.0%
GGTTGTATAGATGAAAGAAA+AGG - chr5_1:42552481-42552500 Msa0731540:intron 30.0%
GTTAGTGGAACATACTTATT+TGG - chr5_1:42552616-42552635 Msa0731540:intron 30.0%
AAAAAAAACTTATTTGGGCC+TGG - chr5_1:42552655-42552674 Msa0731540:intron 30.0%
AATATGTGCAAAGTTCAAGT+AGG + chr5_1:42553042-42553061 None:intergenic 30.0%
TTGAAAGCCAAAATGTCATA+AGG + chr5_1:42553175-42553194 None:intergenic 30.0%
GTTGACAAATATATTATGGG+TGG - chr5_1:42553228-42553247 Msa0731540:intron 30.0%
ACAAATATATTATGGGTGGA+AGG - chr5_1:42553232-42553251 Msa0731540:intron 30.0%
TGTTAAAAGCTAGCAATCAT+GGG - chr5_1:42553343-42553362 Msa0731540:intron 30.0%
! AAATTTGCACAGATCTGTTT+TGG + chr5_1:42554176-42554195 None:intergenic 30.0%
! TTTTGATATCAGTTCCTATC+AGG - chr5_1:42553657-42553676 Msa0731540:intron 30.0%
TTTGATATCAGTTCCTATCA+GGG - chr5_1:42553658-42553677 Msa0731540:intron 30.0%
ATCAAGTAGTATGAGATGTT+GGG + chr5_1:42554909-42554928 None:intergenic 30.0%
ATATGCACAATGTGATCAAA+TGG + chr5_1:42555098-42555117 Msa0731560:CDS 30.0%
TAAAGGAAACAAGATTTGTC+GGG + chr5_1:42555168-42555187 Msa0731560:CDS 30.0%
!!! TATGGTTTTGTCCATTTACA+AGG - chr5_1:42555277-42555296 Msa0731540:intron 30.0%
GATATACAAGTTATACAGAC+AGG + chr5_1:42555452-42555471 None:intergenic 30.0%
! TCATATACTTTCCTTTTGCA+AGG - chr5_1:42556035-42556054 Msa0731540:intron 30.0%
ACATGATAAACTGAAACTGT+TGG + chr5_1:42556128-42556147 None:intergenic 30.0%
CTCTTCCAATCTTCTTATAA+TGG + chr5_1:42556221-42556240 None:intergenic 30.0%
! GGAAGCTTTGATAAGAAATA+TGG - chr5_1:42556273-42556292 Msa0731540:intron 30.0%
! AGCTTTGATAAGAAATATGG+AGG - chr5_1:42556276-42556295 Msa0731540:intron 30.0%
TTTGATAAGAAATATGGAGG+AGG - chr5_1:42556279-42556298 Msa0731540:intron 30.0%
GAAGAACAAATAATTACTGG+TGG - chr5_1:42556431-42556450 Msa0731540:intron 30.0%
AATAAAGTATAGATCCAGAG+AGG - chr5_1:42556459-42556478 Msa0731540:intron 30.0%
TATGTCATGGACAATCAATA+AGG - chr5_1:42556658-42556677 Msa0731540:intron 30.0%
! AAAGTTTTTGATCATCCTTC+AGG - chr5_1:42556684-42556703 Msa0731540:intron 30.0%
! AATACTTATGAAGCGTTTGT+TGG + chr5_1:42556743-42556762 None:intergenic 30.0%
CAAACACAAATAAAAGCCAT+CGG - chr5_1:42556984-42557003 Msa0731540:intron 30.0%
! TACTTTTGTTCTTTGCATGA+CGG + chr5_1:42557016-42557035 None:intergenic 30.0%
TGCAAAGAACAAAAGTAAGA+AGG - chr5_1:42557019-42557038 Msa0731540:intron 30.0%
GCAAAGAACAAAAGTAAGAA+GGG - chr5_1:42557020-42557039 Msa0731540:intron 30.0%
!!! TGACTTGTTTTCTTTTAGGA+GGG + chr5_1:42557139-42557158 None:intergenic 30.0%
!!! TTGACTTGTTTTCTTTTAGG+AGG + chr5_1:42557140-42557159 None:intergenic 30.0%
!!! GGTTTGACTTGTTTTCTTTT+AGG + chr5_1:42557143-42557162 None:intergenic 30.0%
ACTAGACTCTTCTCATTATT+GGG + chr5_1:42557164-42557183 None:intergenic 30.0%
TACTAGACTCTTCTCATTAT+TGG + chr5_1:42557165-42557184 None:intergenic 30.0%
CACAGCAAAATAAATTCTCT+AGG + chr5_1:42557480-42557499 None:intergenic 30.0%
!!! CTAGAGAATTTATTTTGCTG+TGG - chr5_1:42557478-42557497 Msa0731540:intron 30.0%
AATAGAGTGAATGGTTAGAA+GGG - chr5_1:42557584-42557603 Msa0731540:intron 30.0%
AGAGTATGAAAGTAGTTCAA+AGG - chr5_1:42557653-42557672 Msa0731540:intron 30.0%
! TTTACTTTCTTTTTCTCGCA+AGG - chr5_1:42557785-42557804 Msa0731540:intron 30.0%
! TTACTTTCTTTTTCTCGCAA+GGG - chr5_1:42557786-42557805 Msa0731540:intron 30.0%
AACAGTAGAGTAAATGACAA+TGG + chr5_1:42557825-42557844 None:intergenic 30.0%
TAGAATTAATGACAAACCCA+GGG + chr5_1:42557875-42557894 None:intergenic 30.0%
ATAGAATTAATGACAAACCC+AGG + chr5_1:42557876-42557895 None:intergenic 30.0%
CAAGAATATTAAGCAGTACA+CGG + chr5_1:42558281-42558300 None:intergenic 30.0%
TTAATATTCTTGTTCTGCAG+AGG - chr5_1:42558289-42558308 Msa0731540:intron 30.0%
!!! AGTGTATGGCTTTAATTTTG+TGG - chr5_1:42558430-42558449 Msa0731540:intron 30.0%
!!! TATGGCTTTAATTTTGTGGT+CGG - chr5_1:42558434-42558453 Msa0731540:intron 30.0%
ATAAGTCAAAATTACATCCG+TGG - chr5_1:42558502-42558521 Msa0731540:intron 30.0%
!! ATTTTGATCCAGGGATATAT+TGG - chr5_1:42558531-42558550 Msa0731540:intron 30.0%
GACATTTACATACAATGACT+TGG - chr5_1:42558586-42558605 Msa0731540:intron 30.0%
CTCTTTCTATATATCCTCTA+TGG - chr5_1:42558720-42558739 Msa0731540:intron 30.0%
CTTTCTATATATCCTCTATG+GGG - chr5_1:42558722-42558741 Msa0731540:intron 30.0%
TTTCTATATATCCTCTATGG+GGG - chr5_1:42558723-42558742 Msa0731540:intron 30.0%
TTACACTTTCAGTAGTTCTT+AGG - chr5_1:42558914-42558933 Msa0731540:intron 30.0%
! CTTTTGCAATCTTCATTCTT+TGG + chr5_1:42558992-42559011 None:intergenic 30.0%
TAAACTCTCACAAATTCAAC+AGG + chr5_1:42559151-42559170 None:intergenic 30.0%
TGTTGAATTTGTGAGAGTTT+AGG - chr5_1:42559150-42559169 Msa0731540:intron 30.0%
!! GAAAGAGTATCCCTATAAAT+AGG + chr5_1:42559262-42559281 None:intergenic 30.0%
GTTAGGATATAGAATAAAGG+AGG + chr5_1:42559516-42559535 None:intergenic 30.0%
CGTGTTAGGATATAGAATAA+AGG + chr5_1:42559519-42559538 None:intergenic 30.0%
TAGCACTACATTTACATTTG+AGG + chr5_1:42559557-42559576 None:intergenic 30.0%
! CTGTCATATGAAGTGTTAAA+AGG + chr5_1:42559772-42559791 None:intergenic 30.0%
AAAACAGTCCATGATATTAG+TGG + chr5_1:42559825-42559844 None:intergenic 30.0%
TAAAAACCCTTAAGTGTGTT+TGG - chr5_1:42560352-42560371 Msa0731540:intron 30.0%
TGATGTTACATATATTGCAC+AGG + chr5_1:42560750-42560769 None:intergenic 30.0%
AAAACACCTTAATTGGAGAA+AGG + chr5_1:42561057-42561076 None:intergenic 30.0%
TTATAATTACCATAGCCCTT+TGG - chr5_1:42561096-42561115 Msa0731540:CDS 30.0%
TATAATTACCATAGCCCTTT+GGG - chr5_1:42561097-42561116 Msa0731540:CDS 30.0%
TCAAATTAATGACTGCAACT+AGG - chr5_1:42561141-42561160 Msa0731540:CDS 30.0%
! ATATTGGAATTGCATTTTGC+AGG - chr5_1:42561243-42561262 Msa0731540:intron 30.0%
!! TTACTTAGTTGGCTTGAATA+TGG - chr5_1:42561372-42561391 Msa0731540:CDS 30.0%
ATTTATCTATCATGGCCAAA+AGG - chr5_1:42561491-42561510 Msa0731540:five_prime_UTR 30.0%
ATTTGCTCTATCAACTGGAA+CGG + chr5_1:42549601-42549620 None:intergenic 35.0%
! TTGAGATTTGCTCTATCAAC+TGG + chr5_1:42549606-42549625 None:intergenic 35.0%
TTCGATTTCGATCTTCATGA+TGG - chr5_1:42549723-42549742 Msa0731540:intron 35.0%
GAAAGAGAAATTACGAAGCT+CGG + chr5_1:42549878-42549897 None:intergenic 35.0%
! CTTGTTGTAGATACTTCTAG+AGG - chr5_1:42550011-42550030 Msa0731540:intron 35.0%
GACCATATTAGAAAGAGTTG+AGG - chr5_1:42550413-42550432 Msa0731540:intron 35.0%
AGCATCTATAGTAGGAAAGA+TGG - chr5_1:42550437-42550456 Msa0731540:intron 35.0%
ATCTATAGTAGGAAAGATGG+TGG - chr5_1:42550440-42550459 Msa0731540:intron 35.0%
! AAGGAGAGTATATCAGATGA+AGG - chr5_1:42550518-42550537 Msa0731540:intron 35.0%
! TAATGAGTTGGACCAAAGTA+TGG - chr5_1:42550606-42550625 Msa0731540:intron 35.0%
! TTATAAAGGCTTGCTTGGAT+TGG + chr5_1:42550861-42550880 None:intergenic 35.0%
! TTCTCTTATAAAGGCTTGCT+TGG + chr5_1:42550866-42550885 None:intergenic 35.0%
TTGGAGAGCTCATGAAAATA+AGG - chr5_1:42550943-42550962 Msa0731540:intron 35.0%
TAGCATAAGCACTTGTCAAA+CGG + chr5_1:42551020-42551039 None:intergenic 35.0%
ATCCAAACAGGTCTATAATG+TGG - chr5_1:42551062-42551081 Msa0731540:intron 35.0%
ATGGCAATGTGATAGAAACA+AGG - chr5_1:42551376-42551395 Msa0731540:intron 35.0%
CTAAACCACATTACTTACGT+TGG + chr5_1:42551421-42551440 None:intergenic 35.0%
GCACAACTAGAACGATATTA+AGG + chr5_1:42551695-42551714 None:intergenic 35.0%
CTAGAAGGAAGAAATTTGCA+GGG + chr5_1:42552082-42552101 None:intergenic 35.0%
AGAGCATGAAATCACCAAAT+CGG - chr5_1:42552355-42552374 Msa0731540:intron 35.0%
AAAAAGCAGATCCTGTCATT+CGG + chr5_1:42552517-42552536 None:intergenic 35.0%
!!! TTTTTTGTTGTTTCCTGCTG+CGG - chr5_1:42552532-42552551 Msa0731540:intron 35.0%
TTATGTTGAAGGAGAAGACT+AGG - chr5_1:42552583-42552602 Msa0731540:intron 35.0%
AGATCTCACTAAAGATCGTT+GGG + chr5_1:42552910-42552929 None:intergenic 35.0%
AACAAGTGATGCATGGAAAT+AGG + chr5_1:42553014-42553033 None:intergenic 35.0%
AAGCATATCGAAAGAAAGGT+TGG - chr5_1:42553113-42553132 Msa0731540:intron 35.0%
AGCATATCGAAAGAAAGGTT+GGG - chr5_1:42553114-42553133 Msa0731540:intron 35.0%
AAATGTCATAAGGACAAACC+TGG + chr5_1:42553165-42553184 None:intergenic 35.0%
! GGTTTGTCCTTATGACATTT+TGG - chr5_1:42553165-42553184 Msa0731540:intron 35.0%
!!! GATTGCTAGCTTTTAACAGA+GGG + chr5_1:42553341-42553360 Msa0731550:CDS 35.0%
!!! TGATTGCTAGCTTTTAACAG+AGG + chr5_1:42553342-42553361 Msa0731550:CDS 35.0%
CTGTTAAAAGCTAGCAATCA+TGG - chr5_1:42553342-42553361 Msa0731540:intron 35.0%
GTTAAAAGCTAGCAATCATG+GGG - chr5_1:42553344-42553363 Msa0731540:intron 35.0%
TTAAAAGCTAGCAATCATGG+GGG - chr5_1:42553345-42553364 Msa0731540:intron 35.0%
TGTTAGTAATAGGACTCCTA+AGG - chr5_1:42553368-42553387 Msa0731540:intron 35.0%
GTTAGTAATAGGACTCCTAA+GGG - chr5_1:42553369-42553388 Msa0731540:intron 35.0%
TATCTATAACTTCTGCCCTT+AGG + chr5_1:42553387-42553406 Msa0731550:CDS 35.0%
GCAGAAGTTATAGATACTAG+TGG - chr5_1:42553391-42553410 Msa0731540:intron 35.0%
GACTTCTATGTAACAGCTAT+AGG - chr5_1:42553475-42553494 Msa0731540:intron 35.0%
TAAGATGCAGAGGAAAAGAA+AGG - chr5_1:42553513-42553532 Msa0731540:intron 35.0%
! ATTGGGATAAAGGATTGGTA+GGG - chr5_1:42553545-42553564 Msa0731540:intron 35.0%
TGATATCAGTTCCTATCAAC+TGG - chr5_1:42553660-42553679 Msa0731540:intron 35.0%
AGGGAAAGAAATTCACAGTA+GGG - chr5_1:42553703-42553722 Msa0731540:intron 35.0%
!! TGAGAAACATTTTGATGTCG+TGG - chr5_1:42553787-42553806 Msa0731540:intron 35.0%
!! GAGAAACATTTTGATGTCGT+GGG - chr5_1:42553788-42553807 Msa0731540:intron 35.0%
TAGAGACCTTCTACCTATAT+CGG - chr5_1:42553958-42553977 Msa0731540:intron 35.0%
GATCAGTTTCTTCTGATTGA+AGG + chr5_1:42554039-42554058 None:intergenic 35.0%
CAATCAGAAGAAACTGATCA+AGG - chr5_1:42554040-42554059 Msa0731540:intron 35.0%
TTCCACAATGATGACATTCA+TGG + chr5_1:42554140-42554159 None:intergenic 35.0%
ACAGATCTGTGCAAATTTCT+TGG - chr5_1:42554178-42554197 Msa0731540:intron 35.0%
! GACAGACTCTTTTATGAACA+TGG - chr5_1:42554205-42554224 Msa0731540:intron 35.0%
CCTAGAAAAATTATCGGAGA+GGG - chr5_1:42554262-42554281 Msa0731540:intron 35.0%
AAAAATTATCGGAGAGGGAT+GGG - chr5_1:42554267-42554286 Msa0731540:intron 35.0%
! TGTCACTCTACTTCAAGTTA+TGG - chr5_1:42554476-42554495 Msa0731540:intron 35.0%
! GTCACTCTACTTCAAGTTAT+GGG - chr5_1:42554477-42554496 Msa0731540:intron 35.0%
TTATGTTATCCTTCACCTTG+AGG - chr5_1:42554514-42554533 Msa0731540:intron 35.0%
TGTTAGTAATAGGACTCCTA+AGG - chr5_1:42553368-42553387 Msa0731540:intron 35.0%
GTTAGTAATAGGACTCCTAA+GGG - chr5_1:42553369-42553388 Msa0731540:intron 35.0%
TATCTATAACTTCTGCCCTT+AGG + chr5_1:42553387-42553406 Msa0731550:CDS 35.0%
GCAGAAGTTATAGATACTAG+TGG - chr5_1:42553391-42553410 Msa0731540:intron 35.0%
GACTTCTATGTAACAGCTAT+AGG - chr5_1:42553475-42553494 Msa0731540:intron 35.0%
TAAGATGCAGAGGAAAAGAA+AGG - chr5_1:42553513-42553532 Msa0731540:intron 35.0%
! ATTGGGATAAAGGATTGGTA+GGG - chr5_1:42553545-42553564 Msa0731540:intron 35.0%
TTGATATCAGTTCCTATCAG+GGG - chr5_1:42554856-42554875 Msa0731540:intron 35.0%
CATCAAGTAGTATGAGATGT+TGG + chr5_1:42554910-42554929 None:intergenic 35.0%
ACATCTCATACTACTTGATG+TGG - chr5_1:42554910-42554929 Msa0731540:intron 35.0%
CATCTCATACTACTTGATGT+GGG - chr5_1:42554911-42554930 Msa0731540:intron 35.0%
ATCACTTAGTGCAAAAGAGA+AGG - chr5_1:42555513-42555532 Msa0731540:CDS 35.0%
TCACTTAGTGCAAAAGAGAA+GGG - chr5_1:42555514-42555533 Msa0731540:CDS 35.0%
AGGGTTCTTAGAAAGAATCA+AGG - chr5_1:42555533-42555552 Msa0731540:CDS 35.0%
GAAAGAATCAAGGAAGAAGA+AGG - chr5_1:42555543-42555562 Msa0731540:CDS 35.0%
! ATGCAATGTGTATGGCTTTT+TGG - chr5_1:42555572-42555591 Msa0731540:CDS 35.0%
!! TGGCTTTTTGGAAGTAAACA+AGG - chr5_1:42555584-42555603 Msa0731540:CDS 35.0%
!! CTTTTTGGAAGTAAACAAGG+TGG - chr5_1:42555587-42555606 Msa0731540:CDS 35.0%
TAAAGAAGTGAGCAGTTAGT+AGG - chr5_1:42555824-42555843 Msa0731540:intron 35.0%
AAAGAAGTGAGCAGTTAGTA+GGG - chr5_1:42555825-42555844 Msa0731540:intron 35.0%
AAATGAACTAGTGACCCTTT+GGG - chr5_1:42555865-42555884 Msa0731540:intron 35.0%
AGGTGATTATAAAGGATGTG+AGG - chr5_1:42555912-42555931 Msa0731540:intron 35.0%
GGTGATTATAAAGGATGTGA+GGG - chr5_1:42555913-42555932 Msa0731540:intron 35.0%
GTGATTATAAAGGATGTGAG+GGG - chr5_1:42555914-42555933 Msa0731540:intron 35.0%
TGATTATAAAGGATGTGAGG+GGG - chr5_1:42555915-42555934 Msa0731540:intron 35.0%
TAATAGTACCAGTAACTCCA+AGG + chr5_1:42556187-42556206 None:intergenic 35.0%
TGGAGCCATTATAAGAAGAT+TGG - chr5_1:42556213-42556232 Msa0731540:intron 35.0%
TAAGAAGATTGGAAGAGATG+AGG - chr5_1:42556224-42556243 Msa0731540:intron 35.0%
AAGAAGATTGGAAGAGATGA+GGG - chr5_1:42556225-42556244 Msa0731540:intron 35.0%
AAAACGATACTGCAGAATCA+AGG - chr5_1:42556327-42556346 Msa0731540:intron 35.0%
!! TTTTGATCATCCTTCAGGTT+TGG - chr5_1:42556689-42556708 Msa0731540:intron 35.0%
ATTGAAACTGCAACTTTGTC+TGG + chr5_1:42556860-42556879 None:intergenic 35.0%
!! ACTTGTTTTCTTTTAGGAGG+GGG + chr5_1:42557137-42557156 None:intergenic 35.0%
!! GACTTGTTTTCTTTTAGGAG+GGG + chr5_1:42557138-42557157 None:intergenic 35.0%
!! ACTCAAGTCTTTAAGATACG+TGG - chr5_1:42557184-42557203 Msa0731540:intron 35.0%
! AGTTCGAAAATGTTTTACCC+AGG - chr5_1:42557211-42557230 Msa0731540:intron 35.0%
! GTTCGAAAATGTTTTACCCA+GGG - chr5_1:42557212-42557231 Msa0731540:intron 35.0%
! TTCGAAAATGTTTTACCCAG+GGG - chr5_1:42557213-42557232 Msa0731540:intron 35.0%
AAAACAAGGTCTGGCATTAA+TGG - chr5_1:42557246-42557265 Msa0731540:intron 35.0%
AAACAAGGTCTGGCATTAAT+GGG - chr5_1:42557247-42557266 Msa0731540:intron 35.0%
ATTTCTGTTTCATGCTTGCT+TGG - chr5_1:42557430-42557449 Msa0731540:intron 35.0%
TGTGGTAAGAATAGAGTGAA+TGG - chr5_1:42557575-42557594 Msa0731540:intron 35.0%
GAATAGAGTGAATGGTTAGA+AGG - chr5_1:42557583-42557602 Msa0731540:intron 35.0%
AAAGTAGTTCAAAGGAAGTG+AGG - chr5_1:42557661-42557680 Msa0731540:intron 35.0%
! TACTTTCTTTTTCTCGCAAG+GGG - chr5_1:42557787-42557806 Msa0731540:intron 35.0%
AGAATTAATGACAAACCCAG+GGG + chr5_1:42557874-42557893 None:intergenic 35.0%
TCTTGATTATCAGTGTGCAT+TGG - chr5_1:42558196-42558215 Msa0731540:intron 35.0%
AAATACTGATACATCCCACT+GGG + chr5_1:42558234-42558253 None:intergenic 35.0%
AAAATACTGATACATCCCAC+TGG + chr5_1:42558235-42558254 None:intergenic 35.0%
!! CTTCTATTGGTGTTAGTGTA+TGG - chr5_1:42558416-42558435 Msa0731540:intron 35.0%
TGGATCAAAATTCATAGCCA+CGG + chr5_1:42558522-42558541 None:intergenic 35.0%
!! TGGCTATGAATTTTGATCCA+GGG - chr5_1:42558522-42558541 Msa0731540:intron 35.0%
AAGTATGACCAATATATCCC+TGG + chr5_1:42558542-42558561 None:intergenic 35.0%
GCTGTTGTGTATAATTGACA+AGG + chr5_1:42558780-42558799 None:intergenic 35.0%
TTAGGATCCTTACTTTGTGT+AGG - chr5_1:42558932-42558951 Msa0731540:intron 35.0%
ACATTCTCCTACACAAAGTA+AGG + chr5_1:42558942-42558961 None:intergenic 35.0%
AAATTCAACAGGTTTCTGAC+TGG + chr5_1:42559140-42559159 None:intergenic 35.0%
TTGTGAGAGTTTAGGTAAGA+AGG - chr5_1:42559158-42559177 Msa0731540:intron 35.0%
! CTTTTAAATTAGCCCTCGAT+TGG + chr5_1:42559433-42559452 None:intergenic 35.0%
GCAATTGAAATCGTGTAAGA+TGG - chr5_1:42559639-42559658 Msa0731540:intron 35.0%
CACTTCATATGACAGCTTTA+AGG - chr5_1:42559777-42559796 Msa0731540:CDS 35.0%
AAGCAAATAAACCAGACTGA+AGG + chr5_1:42559872-42559891 None:intergenic 35.0%
CAATTTCTCACATGTAGGAT+TGG - chr5_1:42559914-42559933 Msa0731540:CDS 35.0%
CACAATCTACTATCTACAGA+CGG + chr5_1:42560704-42560723 None:intergenic 35.0%
! ATTGTGTGTGCCTTTTGAAT+TGG - chr5_1:42560718-42560737 Msa0731540:intron 35.0%
! ACCTTGTCAAATTTTACCAC+TGG - chr5_1:42560798-42560817 Msa0731540:intron 35.0%
AATCTGAACAACAACCCAAA+GGG + chr5_1:42561114-42561133 None:intergenic 35.0%
AAATCTGAACAACAACCCAA+AGG + chr5_1:42561115-42561134 None:intergenic 35.0%
CATTTGTATACCTCCAACTA+TGG + chr5_1:42561323-42561342 None:intergenic 35.0%
! CATAGTTGGAGGTATACAAA+TGG - chr5_1:42561321-42561340 Msa0731540:CDS 35.0%
AGACAGACTGAAGACAAATA+GGG + chr5_1:42561353-42561372 None:intergenic 35.0%
AAGACAGACTGAAGACAAAT+AGG + chr5_1:42561354-42561373 None:intergenic 35.0%
TTCAGTCTGTCTTACTTAGT+TGG - chr5_1:42561361-42561380 Msa0731540:CDS 35.0%
! ACAGGAATTTTCACTGTTTC+TGG - chr5_1:42561456-42561475 Msa0731540:five_prime_UTR 35.0%
!! TCTTCTTCTTGATAGCCTTT+TGG + chr5_1:42561509-42561528 None:intergenic 35.0%
AAAGGCTATCAAGAAGAAGA+TGG - chr5_1:42561509-42561528 Msa0731540:five_prime_UTR 35.0%
ATCAAGAAGAAGATGGAACT+CGG - chr5_1:42561516-42561535 Msa0731540:five_prime_UTR 35.0%
TTTGCTCTATCAACTGGAAC+GGG + chr5_1:42549600-42549619 None:intergenic 40.0%
TTCTATAGTCGCACTCTTTC+TGG - chr5_1:42549802-42549821 Msa0731540:intron 40.0%
! GAAAAGCAAGAGCATGAGAA+TGG + chr5_1:42549851-42549870 None:intergenic 40.0%
ATAGGCTATAAGCCTAGATC+AGG - chr5_1:42550347-42550366 Msa0731540:intron 40.0%
GTTGAGGTAGCATCTATAGT+AGG - chr5_1:42550429-42550448 Msa0731540:intron 40.0%
CAAAGTCATGTCAGCTACAT+GGG + chr5_1:42550662-42550681 None:intergenic 40.0%
ACAAAGTCATGTCAGCTACA+TGG + chr5_1:42550663-42550682 None:intergenic 40.0%
ATGTAGCTGACATGACTTTG+TGG - chr5_1:42550662-42550681 Msa0731540:intron 40.0%
TGTAGCTGACATGACTTTGT+GGG - chr5_1:42550663-42550682 Msa0731540:intron 40.0%
TGACATGACTTTGTGGGAAA+AGG - chr5_1:42550669-42550688 Msa0731540:intron 40.0%
!! GCTGTTTTCATAAGCTAGCT+TGG - chr5_1:42550924-42550943 Msa0731540:intron 40.0%
CACCACATTATAGACCTGTT+TGG + chr5_1:42551067-42551086 None:intergenic 40.0%
TATACTTAGTCTCGATGCCA+TGG - chr5_1:42551176-42551195 Msa0731540:intron 40.0%
GTGATAGAAACAAGGCAAGA+TGG - chr5_1:42551384-42551403 Msa0731540:intron 40.0%
GAAACAAGGCAAGATGGAAT+CGG - chr5_1:42551390-42551409 Msa0731540:intron 40.0%
TTCTCCCAACGTAAGTAATG+TGG - chr5_1:42551413-42551432 Msa0731540:intron 40.0%
AGGGAGATACGAAGAAATTC+TGG + chr5_1:42551723-42551742 None:intergenic 40.0%
CATGAATCAAGTGTGAGCAA+GGG + chr5_1:42551742-42551761 None:intergenic 40.0%
GAAAAACCCTTGCAAAGACA+TGG - chr5_1:42551800-42551819 Msa0731540:intron 40.0%
GAGCACAATGAGACTTATTG+CGG - chr5_1:42551833-42551852 Msa0731540:intron 40.0%
ACTTATTGCGGATCCTGTTA+TGG - chr5_1:42551845-42551864 Msa0731540:intron 40.0%
GCTAGAAGGAAGAAATTTGC+AGG + chr5_1:42552083-42552102 None:intergenic 40.0%
GGTTCAAAGTTCGCAGAATA+CGG - chr5_1:42552309-42552328 Msa0731540:intron 40.0%
!!! TTTTTGTTGTTTCCTGCTGC+GGG - chr5_1:42552533-42552552 Msa0731540:intron 40.0%
CTAGGTCTAGGTTAAGTTAG+TGG - chr5_1:42552601-42552620 Msa0731540:intron 40.0%
GTAGATCGTACGATGTAACA+AGG + chr5_1:42552880-42552899 None:intergenic 40.0%
GATCTCACTAAAGATCGTTG+GGG + chr5_1:42552909-42552928 None:intergenic 40.0%
GAGATCTCACTAAAGATCGT+TGG + chr5_1:42552911-42552930 None:intergenic 40.0%
!! GATCTCGATTTTGACAACCA+TGG - chr5_1:42552925-42552944 Msa0731540:intron 40.0%
GGAATGTTGTAATTCCTGTG+AGG - chr5_1:42553081-42553100 Msa0731540:intron 40.0%
CGTGAAGCATATCGAAAGAA+AGG - chr5_1:42553109-42553128 Msa0731540:intron 40.0%
AAACCTGGTCAATTGAATCC+GGG + chr5_1:42553150-42553169 None:intergenic 40.0%
CAAACCTGGTCAATTGAATC+CGG + chr5_1:42553151-42553170 None:intergenic 40.0%
!! ATCATGGGGGTGTTAGTAAT+AGG - chr5_1:42553358-42553377 Msa0731540:intron 40.0%
!! AGAGGAAAAGAAAGGCATTC+AGG - chr5_1:42553521-42553540 Msa0731540:intron 40.0%
!! GAGGAAAAGAAAGGCATTCA+GGG - chr5_1:42553522-42553541 Msa0731540:intron 40.0%
!! AAAGAAAGGCATTCAGGGAT+TGG - chr5_1:42553527-42553546 Msa0731540:intron 40.0%
!! AAGAAAGGCATTCAGGGATT+GGG - chr5_1:42553528-42553547 Msa0731540:intron 40.0%
! GATTGGGATAAAGGATTGGT+AGG - chr5_1:42553544-42553563 Msa0731540:intron 40.0%
ACCAAGACTCTCGAATTTCT+TGG - chr5_1:42553603-42553622 Msa0731540:intron 40.0%
CCAAGACTCTCGAATTTCTT+GGG - chr5_1:42553604-42553623 Msa0731540:intron 40.0%
CTACTGTGAATTTCTTTCCC+TGG + chr5_1:42553704-42553723 None:intergenic 40.0%
CAGGGAAAGAAATTCACAGT+AGG - chr5_1:42553702-42553721 Msa0731540:intron 40.0%
GGGAAAGAAATTCACAGTAG+GGG - chr5_1:42553704-42553723 Msa0731540:intron 40.0%
GGAAAGAAATTCACAGTAGG+GGG - chr5_1:42553705-42553724 Msa0731540:intron 40.0%
GAAAGAAATTCACAGTAGGG+GGG - chr5_1:42553706-42553725 Msa0731540:intron 40.0%
ATGGACATGCCACAATTTGA+CGG - chr5_1:42553731-42553750 Msa0731540:intron 40.0%
CGTTTCACGTTGCATTCATT+TGG - chr5_1:42553918-42553937 Msa0731540:intron 40.0%
CTTCATCCGATATAGGTAGA+AGG + chr5_1:42553967-42553986 None:intergenic 40.0%
ACCTATATCGGATGAAGAAG+AGG - chr5_1:42553970-42553989 Msa0731540:intron 40.0%
TCCTCTTCTTCATCCGATAT+AGG + chr5_1:42553974-42553993 None:intergenic 40.0%
TGAAGAAGAGGAATCTGGAT+TGG - chr5_1:42553982-42554001 Msa0731540:intron 40.0%
! AAGAGGAATCTGGATTGGAA+TGG - chr5_1:42553987-42554006 Msa0731540:intron 40.0%
! AGAGGAATCTGGATTGGAAT+GGG - chr5_1:42553988-42554007 Msa0731540:intron 40.0%
GGTAGAGAATGCAGAAGAAA+TGG - chr5_1:42554099-42554118 Msa0731540:intron 40.0%
CACAATGATGACATTCATGG+AGG + chr5_1:42554137-42554156 None:intergenic 40.0%
CTCCATGAATGTCATCATTG+TGG - chr5_1:42554135-42554154 Msa0731540:intron 40.0%
GCCTAGAAAAATTATCGGAG+AGG - chr5_1:42554261-42554280 Msa0731540:intron 40.0%
! CCCTCTCCGATAATTTTTCT+AGG + chr5_1:42554265-42554284 None:intergenic 40.0%
GAAAAATTATCGGAGAGGGA+TGG - chr5_1:42554266-42554285 Msa0731540:intron 40.0%
!! CTCTTTTGGGGAGGAATTTT+CGG + chr5_1:42554412-42554431 None:intergenic 40.0%
! TGCATCAGACACTCTCTTTT+GGG + chr5_1:42554425-42554444 None:intergenic 40.0%
! ATGCATCAGACACTCTCTTT+TGG + chr5_1:42554426-42554445 None:intergenic 40.0%
GATAACATAACTGTCCACCA+GGG + chr5_1:42554504-42554523 None:intergenic 40.0%
!! GGGGGAGTATTGTTAGTAAT+AGG - chr5_1:42554555-42554574 Msa0731540:intron 40.0%
!! AGAGGAAAAGAAAGGCATTC+AGG - chr5_1:42553521-42553540 Msa0731540:intron 40.0%
!! GAGGAAAAGAAAGGCATTCA+GGG - chr5_1:42553522-42553541 Msa0731540:intron 40.0%
!! AAAGAAAGGCATTCAGGGAT+TGG - chr5_1:42553527-42553546 Msa0731540:intron 40.0%
!! AAGAAAGGCATTCAGGGATT+GGG - chr5_1:42553528-42553547 Msa0731540:intron 40.0%
! GATTGGGATAAAGGATTGGT+AGG - chr5_1:42553544-42553563 Msa0731540:intron 40.0%
ACCAAGACTCTCGAATTTCT+TGG - chr5_1:42553603-42553622 Msa0731540:intron 40.0%
CCAAGACTCTCGAATTTCTT+GGG - chr5_1:42553604-42553623 Msa0731540:intron 40.0%
TGATATCAGTTCCTATCAGG+GGG - chr5_1:42554857-42554876 Msa0731540:intron 40.0%
AAGTAGTATGAGATGTTGGG+TGG + chr5_1:42554906-42554925 None:intergenic 40.0%
ATACTACTTGATGTGGGACT+TGG - chr5_1:42554917-42554936 Msa0731540:intron 40.0%
AGGAATCTGAACTGCTGATA+GGG + chr5_1:42554963-42554982 None:intergenic 40.0%
AAGGAATCTGAACTGCTGAT+AGG + chr5_1:42554964-42554983 None:intergenic 40.0%
ATCAAGGAAGAAGAAGGTGA+AGG - chr5_1:42555549-42555568 Msa0731540:CDS 40.0%
! GGAATTTCCATTTTGCTCCT+GGG - chr5_1:42555613-42555632 Msa0731540:intron 40.0%
CAAATGAACTAGTGACCCTT+TGG - chr5_1:42555864-42555883 Msa0731540:intron 40.0%
AATGAACTAGTGACCCTTTG+GGG - chr5_1:42555866-42555885 Msa0731540:intron 40.0%
AGGAGGTGAGGTGATTATAA+AGG - chr5_1:42555904-42555923 Msa0731540:intron 40.0%
!! TATGATGGATGAGTGTGAAG+AGG - chr5_1:42555948-42555967 Msa0731540:intron 40.0%
!! ATGATGGATGAGTGTGAAGA+GGG - chr5_1:42555949-42555968 Msa0731540:intron 40.0%
! ACAGACAGAGATTTAGAGCA+AGG - chr5_1:42556352-42556371 Msa0731540:intron 40.0%
! CAGACAGAGATTTAGAGCAA+GGG - chr5_1:42556353-42556372 Msa0731540:intron 40.0%
!! AACAATTTTGGTGGCAGCAA+AGG + chr5_1:42556519-42556538 None:intergenic 40.0%
TTTGCTGCCACCAAAATTGT+TGG - chr5_1:42556518-42556537 Msa0731540:intron 40.0%
! CTGGTATCCAACAATTTTGG+TGG + chr5_1:42556528-42556547 None:intergenic 40.0%
! GAGCTGGTATCCAACAATTT+TGG + chr5_1:42556531-42556550 None:intergenic 40.0%
AACCAAAATCAGATCCAAGC+TGG - chr5_1:42556587-42556606 Msa0731540:intron 40.0%
TCTGACGATGAAGGTTCTTA+TGG - chr5_1:42556633-42556652 Msa0731540:intron 40.0%
CTGACGATGAAGGTTCTTAT+GGG - chr5_1:42556634-42556653 Msa0731540:intron 40.0%
GGTTCTTATGGGATATGTCA+TGG - chr5_1:42556645-42556664 Msa0731540:intron 40.0%
!! ATTTTAGGTCACTGAGAGAG+TGG - chr5_1:42556765-42556784 Msa0731540:intron 40.0%
!! TTTTAGGTCACTGAGAGAGT+GGG - chr5_1:42556766-42556785 Msa0731540:intron 40.0%
!!! TGTTTTGACTGGTACTTCAC+AGG + chr5_1:42556822-42556841 None:intergenic 40.0%
!!! TTTACTGAGGGTGTTTTGAC+TGG + chr5_1:42556833-42556852 None:intergenic 40.0%
! AACTATAGAGTACTCGAGCT+AGG + chr5_1:42556899-42556918 None:intergenic 40.0%
TCGAGTACTCTATAGTTGTG+AGG - chr5_1:42556902-42556921 Msa0731540:intron 40.0%
ACTCTATAGTTGTGAGGAAC+AGG - chr5_1:42556908-42556927 Msa0731540:intron 40.0%
AAGTAAGAAGGGTAGCAGAT+TGG - chr5_1:42557031-42557050 Msa0731540:intron 40.0%
AGTAAGAAGGGTAGCAGATT+GGG - chr5_1:42557032-42557051 Msa0731540:intron 40.0%
ACTAGGGTAAACAGAGAAAG+AGG - chr5_1:42557069-42557088 Msa0731540:intron 40.0%
AGCACTCAAAAAACAAGGTC+TGG - chr5_1:42557237-42557256 Msa0731540:intron 40.0%
! TAATGGGTCAAGCTAAAGTG+AGG - chr5_1:42557263-42557282 Msa0731540:intron 40.0%
GTTGAATAAGATCCAAGACC+AGG - chr5_1:42557312-42557331 Msa0731540:intron 40.0%
TTATTATTGCAGCTGCAAGG+AGG - chr5_1:42557351-42557370 Msa0731540:intron 40.0%
! AGGGTTGAATGCACTGTTTT+GGG + chr5_1:42557402-42557421 None:intergenic 40.0%
! AAGGGTTGAATGCACTGTTT+TGG + chr5_1:42557403-42557422 None:intergenic 40.0%
AAAACAGTGCATTCAACCCT+TGG - chr5_1:42557402-42557421 Msa0731540:intron 40.0%
AAACAGTGCATTCAACCCTT+GGG - chr5_1:42557403-42557422 Msa0731540:intron 40.0%
GAAACAGAAATCTTCCCCAA+GGG + chr5_1:42557421-42557440 None:intergenic 40.0%
TGAAACAGAAATCTTCCCCA+AGG + chr5_1:42557422-42557441 None:intergenic 40.0%
! GTCATCATCCTTCAGGTTAT+GGG - chr5_1:42557452-42557471 Msa0731540:intron 40.0%
!! TCCTTTCAAGTTTCACCTTG+AGG - chr5_1:42557506-42557525 Msa0731540:intron 40.0%
TCCTCAAGGTGAAACTTGAA+AGG + chr5_1:42557510-42557529 None:intergenic 40.0%
!! TAGTTGGTGGCGATATTGAT+AGG - chr5_1:42557541-42557560 Msa0731540:intron 40.0%
TGATAGGCACATCAGAAATG+TGG - chr5_1:42557557-42557576 Msa0731540:intron 40.0%
! AAAAAGTACAGGTGGCTCTT+TGG - chr5_1:42557624-42557643 Msa0731540:intron 40.0%
! AAAAGTACAGGTGGCTCTTT+GGG - chr5_1:42557625-42557644 Msa0731540:intron 40.0%
TAGTTCAAAGGAAGTGAGGT+GGG - chr5_1:42557665-42557684 Msa0731540:intron 40.0%
TGTATAGAGGATTAATCCCC+TGG - chr5_1:42557855-42557874 Msa0731540:intron 40.0%
GTATAGAGGATTAATCCCCT+GGG - chr5_1:42557856-42557875 Msa0731540:intron 40.0%
CAAAGGCTATTCTGTTGATG+TGG + chr5_1:42558054-42558073 None:intergenic 40.0%
CACATCAACAGAATAGCCTT+TGG - chr5_1:42558052-42558071 Msa0731540:intron 40.0%
TGAGAACATAAAGAGCTCAC+CGG + chr5_1:42558111-42558130 None:intergenic 40.0%
GTTACAAATGCAACTCCCAA+GGG + chr5_1:42558461-42558480 None:intergenic 40.0%
TGTTACAAATGCAACTCCCA+AGG + chr5_1:42558462-42558481 None:intergenic 40.0%
!! GTGGCTATGAATTTTGATCC+AGG - chr5_1:42558521-42558540 Msa0731540:intron 40.0%
TTGCAGTGAAATGAGACAGT+TGG + chr5_1:42558659-42558678 None:intergenic 40.0%
CTGTCTCATTTCACTGCAAT+TGG - chr5_1:42558660-42558679 Msa0731540:intron 40.0%
!! TTTTATAGCCTTAACGTCCC+TGG - chr5_1:42558803-42558822 Msa0731540:intron 40.0%
AAGTGTAACTCGTTGTCACA+CGG + chr5_1:42558902-42558921 None:intergenic 40.0%
TGGTTAATCCAGTGTGAAAG+GGG + chr5_1:42559120-42559139 None:intergenic 40.0%
CTGGTTAATCCAGTGTGAAA+GGG + chr5_1:42559121-42559140 None:intergenic 40.0%
ACTGGTTAATCCAGTGTGAA+AGG + chr5_1:42559122-42559141 None:intergenic 40.0%
GTTTAGGTAAGAAGGAAGAG+AGG - chr5_1:42559166-42559185 Msa0731540:intron 40.0%
AATAAACCAGACTGAAGGAG+TGG + chr5_1:42559867-42559886 None:intergenic 40.0%
! TCTGTAAGGCAAGTGTCTTT+TGG - chr5_1:42560312-42560331 Msa0731540:intron 40.0%
! CTGTAAGGCAAGTGTCTTTT+GGG - chr5_1:42560313-42560332 Msa0731540:intron 40.0%
AACCCTTAAGTGTGTTTGGA+TGG - chr5_1:42560356-42560375 Msa0731540:intron 40.0%
CTCCATCCAAACACACTTAA+GGG + chr5_1:42560361-42560380 None:intergenic 40.0%
CTTAAGTGTGTTTGGATGGA+GGG - chr5_1:42560360-42560379 Msa0731540:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + chr5_1:42560572-42560591 None:intergenic 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr5_1:42560576-42560595 None:intergenic 40.0%
! TAAGGGTGTGTTTGGATTGA+GGG + chr5_1:42560582-42560601 None:intergenic 40.0%
!! CAGGAAAGTGCCAATTCAAA+AGG + chr5_1:42560731-42560750 None:intergenic 40.0%
GCCAGTGGTAAAATTTGACA+AGG + chr5_1:42560802-42560821 None:intergenic 40.0%
GAAAAACAACATGAAGCCAG+TGG + chr5_1:42560817-42560836 None:intergenic 40.0%
!!! CTGGCTTCATGTTGTTTTTC+AGG - chr5_1:42560817-42560836 Msa0731540:intron 40.0%
!!! GCTTCATGTTGTTTTTCAGG+TGG - chr5_1:42560820-42560839 Msa0731540:intron 40.0%
! GATCAATAACCTGGTTTGAC+TGG + chr5_1:42560883-42560902 None:intergenic 40.0%
TCTCTGTGACAGAACACTTT+AGG - chr5_1:42560978-42560997 Msa0731540:intron 40.0%
! TGTGACAGAACACTTTAGGA+CGG - chr5_1:42560982-42561001 Msa0731540:intron 40.0%
CGTAGAAGAAAAAAACCCCA+GGG + chr5_1:42561033-42561052 None:intergenic 40.0%
TCGTAGAAGAAAAAAACCCC+AGG + chr5_1:42561034-42561053 None:intergenic 40.0%
CTACGACCTTTCTCCAATTA+AGG - chr5_1:42561048-42561067 Msa0731540:intron 40.0%
CCTGTATGCAAAAGCAAGAA+TGG + chr5_1:42561441-42561460 None:intergenic 40.0%
!! CCATTCTTGCTTTTGCATAC+AGG - chr5_1:42561438-42561457 Msa0731540:five_prime_UTR 40.0%
! AAAGTACTCCAACAACAGCA+AGG + chr5_1:42561576-42561595 None:intergenic 40.0%
!! TTTCGCGATTTGGTTGAAGC+AGG + chr5_1:42549574-42549593 None:intergenic 45.0%
TTGCTCTATCAACTGGAACG+GGG + chr5_1:42549599-42549618 None:intergenic 45.0%
TATAGTCGCACTCTTTCTGG+CGG - chr5_1:42549805-42549824 Msa0731540:intron 45.0%
TGACTTTGTGGGAAAAGGCT+TGG - chr5_1:42550674-42550693 Msa0731540:intron 45.0%
AGTATAGAACACGCTAGTGC+AGG + chr5_1:42551162-42551181 None:intergenic 45.0%
TTGTTCTCCGCTAATGTCCA+TGG + chr5_1:42551196-42551215 None:intergenic 45.0%
CATTAGCGGAGAACAACATC+TGG - chr5_1:42551200-42551219 Msa0731540:intron 45.0%
CCATGAATCAAGTGTGAGCA+AGG + chr5_1:42551743-42551762 None:intergenic 45.0%
CCTTGCTCACACTTGATTCA+TGG - chr5_1:42551740-42551759 Msa0731540:intron 45.0%
AAACCCTTGCAAAGACATGG+AGG - chr5_1:42551803-42551822 Msa0731540:intron 45.0%
CAAGGCATGATTAGCAGTCA+AGG - chr5_1:42552056-42552075 Msa0731540:intron 45.0%
!!! CAATTTTATGGCGTTGGCCA+TGG - chr5_1:42552215-42552234 Msa0731540:intron 45.0%
AACTTTGAACCGCTCCAACT+TGG + chr5_1:42552300-42552319 None:intergenic 45.0%
TCAAAGTTCGCAGAATACGG+CGG - chr5_1:42552312-42552331 Msa0731540:intron 45.0%
!! TCGCTACAAAGAAGAGCGTT+TGG - chr5_1:42552387-42552406 Msa0731540:intron 45.0%
!! TACAAAGAAGAGCGTTTGGC+CGG - chr5_1:42552391-42552410 Msa0731540:intron 45.0%
! GTTTTGTAGCTCCGAATGAC+AGG - chr5_1:42552503-42552522 Msa0731540:intron 45.0%
GTTGCTTAAAGTTGCAGAGG+CGG - chr5_1:42552555-42552574 Msa0731540:intron 45.0%
TGAAGGAGAAGACTAGGTCT+AGG - chr5_1:42552589-42552608 Msa0731540:intron 45.0%
! CGCTGGCTAATCCATGTAAT+GGG - chr5_1:42552948-42552967 Msa0731540:intron 45.0%
GGCATCAAACAAGTGATGCA+TGG + chr5_1:42553021-42553040 None:intergenic 45.0%
AGAGGGTTCTCAATGTGCTT+GGG + chr5_1:42553324-42553343 Msa0731550:CDS 45.0%
GCATTCAGGGATTGGGATAA+AGG - chr5_1:42553535-42553554 Msa0731540:intron 45.0%
CAGGGATTGGGATAAAGGAT+TGG - chr5_1:42553540-42553559 Msa0731540:intron 45.0%
AGACCAAGCTCTCGAATTCT+TGG - chr5_1:42553570-42553589 Msa0731540:intron 45.0%
CAAGCTCTCGAATTCTTGGA+GGG - chr5_1:42553574-42553593 Msa0731540:intron 45.0%
AAGCTCTCGAATTCTTGGAG+GGG - chr5_1:42553575-42553594 Msa0731540:intron 45.0%
CCCAAGAAATTCGAGAGTCT+TGG + chr5_1:42553607-42553626 None:intergenic 45.0%
CTGCTCTGATACCAGTTGAT+AGG + chr5_1:42553674-42553693 None:intergenic 45.0%
! TATCAGAGCAGTTCTGATCC+AGG - chr5_1:42553683-42553702 Msa0731540:intron 45.0%
! ATCAGAGCAGTTCTGATCCA+GGG - chr5_1:42553684-42553703 Msa0731540:intron 45.0%
AATTCACAGTAGGGGGGAAA+TGG - chr5_1:42553712-42553731 Msa0731540:intron 45.0%
! TTTTGATGTCGTGGGAACAC+AGG - chr5_1:42553796-42553815 Msa0731540:intron 45.0%
GGTAGAAGGTCTCTATACTC+TGG + chr5_1:42553953-42553972 None:intergenic 45.0%
TCGGATGAAGAAGAGGAATC+TGG - chr5_1:42553977-42553996 Msa0731540:intron 45.0%
GATTGAAGGCTGAATGTGTG+AGG + chr5_1:42554025-42554044 None:intergenic 45.0%
ACTCATTCAGACAGCAGAAG+AGG - chr5_1:42554072-42554091 Msa0731540:intron 45.0%
TCAGACAGCAGAAGAGGAAA+AGG - chr5_1:42554078-42554097 Msa0731540:intron 45.0%
TGAGTAGTGTGTTCGAATCG+AGG - chr5_1:42554230-42554249 Msa0731540:intron 45.0%
GAGTAGTGTGTTCGAATCGA+GGG - chr5_1:42554231-42554250 Msa0731540:intron 45.0%
ACAAACACATCTGGATCTGG+CGG + chr5_1:42554334-42554353 None:intergenic 45.0%
ACCACAAACACATCTGGATC+TGG + chr5_1:42554337-42554356 None:intergenic 45.0%
CTCTTCACCACAAACACATC+TGG + chr5_1:42554343-42554362 None:intergenic 45.0%
GATGTGTTTGTGGTGAAGAG+TGG - chr5_1:42554343-42554362 Msa0731540:intron 45.0%
!! GTGAAGAGTGGATTATCCTC+TGG - chr5_1:42554355-42554374 Msa0731540:intron 45.0%
! ATCCTCTGGTTTGATCGAAC+TGG - chr5_1:42554369-42554388 Msa0731540:intron 45.0%
! GAGGAATTTTCGGCAGCAAT+AGG + chr5_1:42554402-42554421 None:intergenic 45.0%
! GCATCAGACACTCTCTTTTG+GGG + chr5_1:42554424-42554443 None:intergenic 45.0%
TGAAGTAGAGTGACAGAGCA+AGG + chr5_1:42554471-42554490 None:intergenic 45.0%
! TACTTCAAGTTATGGGACCC+TGG - chr5_1:42554484-42554503 Msa0731540:intron 45.0%
GGATAACATAACTGTCCACC+AGG + chr5_1:42554505-42554524 None:intergenic 45.0%
TATCCTTCACCTTGAGGACA+AGG - chr5_1:42554520-42554539 Msa0731540:intron 45.0%
GCATTCAGGGATTGGGATAA+AGG - chr5_1:42553535-42553554 Msa0731540:intron 45.0%
CAGGGATTGGGATAAAGGAT+TGG - chr5_1:42553540-42553559 Msa0731540:intron 45.0%
AGACCAAGCTCTCGAATTCT+TGG - chr5_1:42553570-42553589 Msa0731540:intron 45.0%
CAAGCTCTCGAATTCTTGGA+GGG - chr5_1:42553574-42553593 Msa0731540:intron 45.0%
AAGCTCTCGAATTCTTGGAG+GGG - chr5_1:42553575-42553594 Msa0731540:intron 45.0%
CCCAAGAAATTCGAGAGTCT+TGG + chr5_1:42553607-42553626 None:intergenic 45.0%
ATTTGTCTCATCCCCCTGAT+AGG + chr5_1:42554871-42554890 None:intergenic 45.0%
ATAGGGACTTGGGCATTATG+AGG + chr5_1:42554946-42554965 None:intergenic 45.0%
TGAACTGCTGATAGGGACTT+GGG + chr5_1:42554956-42554975 None:intergenic 45.0%
GGTGAAGGATGCAATGTGTA+TGG - chr5_1:42555564-42555583 Msa0731540:CDS 45.0%
TTGGAAGTAAACAAGGTGGC+AGG - chr5_1:42555591-42555610 Msa0731540:CDS 45.0%
TGGAAGTAAACAAGGTGGCA+GGG - chr5_1:42555592-42555611 Msa0731540:CDS 45.0%
! GGGAATTTCCATTTTGCTCC+TGG - chr5_1:42555612-42555631 Msa0731540:intron 45.0%
! AGCTTTTCCCAGGAGCAAAA+TGG + chr5_1:42555623-42555642 None:intergenic 45.0%
! GATTGCTGAAAGCTTTTCCC+AGG + chr5_1:42555633-42555652 None:intergenic 45.0%
GGGAAAAGCTTTCAGCAATC+TGG - chr5_1:42555633-42555652 Msa0731540:intron 45.0%
!!! TGACCTGCTGGCTTTTCAAA+AGG - chr5_1:42555668-42555687 Msa0731540:intron 45.0%
!! ACTCCTTTTGAAAAGCCAGC+AGG + chr5_1:42555674-42555693 None:intergenic 45.0%
ATGAACTAGTGACCCTTTGG+GGG - chr5_1:42555867-42555886 Msa0731540:intron 45.0%
TGAGTGTGAAGAGGGAATTC+AGG - chr5_1:42555957-42555976 Msa0731540:intron 45.0%
GAGTGTGAAGAGGGAATTCA+GGG - chr5_1:42555958-42555977 Msa0731540:intron 45.0%
AGTGTGAAGAGGGAATTCAG+GGG - chr5_1:42555959-42555978 Msa0731540:intron 45.0%
GAATTCAGGGGCTGAGTATT+GGG - chr5_1:42555971-42555990 Msa0731540:intron 45.0%
TGGGTGATTCCCATCATAGA+AGG - chr5_1:42555990-42556009 Msa0731540:intron 45.0%
GGGTGATTCCCATCATAGAA+GGG - chr5_1:42555991-42556010 Msa0731540:intron 45.0%
GGTGATTCCCATCATAGAAG+GGG - chr5_1:42555992-42556011 Msa0731540:intron 45.0%
!! AGAAGGGGTGCTCTCAATAT+TGG - chr5_1:42556007-42556026 Msa0731540:intron 45.0%
GAGATGAATCGCCTTGCAAA+AGG + chr5_1:42556049-42556068 None:intergenic 45.0%
ATTGGAAGAGATGAGGGAGA+TGG - chr5_1:42556231-42556250 Msa0731540:intron 45.0%
! AAGAAATATGGAGGAGGCGT+TGG - chr5_1:42556285-42556304 Msa0731540:intron 45.0%
TTGGAGAGGCAAGCAAAGAA+AGG - chr5_1:42556304-42556323 Msa0731540:intron 45.0%
! AGATTTAGAGCAAGGGAGCA+AGG - chr5_1:42556360-42556379 Msa0731540:intron 45.0%
AGTATAGATCCAGAGAGGTG+AGG - chr5_1:42556464-42556483 Msa0731540:intron 45.0%
GTATAGATCCAGAGAGGTGA+GGG - chr5_1:42556465-42556484 Msa0731540:intron 45.0%
AGATCAAGACTCACCACAGA+TGG - chr5_1:42556488-42556507 Msa0731540:intron 45.0%
AGCAAAGGATCTTCCATCTG+TGG + chr5_1:42556504-42556523 None:intergenic 45.0%
! GACCAGCTTGGATCTGATTT+TGG + chr5_1:42556592-42556611 None:intergenic 45.0%
! CATCCTTCAGGTTTGGATCT+CGG - chr5_1:42556696-42556715 Msa0731540:intron 45.0%
! ATCCTTCAGGTTTGGATCTC+GGG - chr5_1:42556697-42556716 Msa0731540:intron 45.0%
ATGGGTCTTCAGTAACGACA+GGG - chr5_1:42556789-42556808 Msa0731540:intron 45.0%
TTCAGTAACGACAGGGCTTT+GGG - chr5_1:42556796-42556815 Msa0731540:intron 45.0%
! TTGTCTGGTGGCTTTACTGA+GGG + chr5_1:42556845-42556864 None:intergenic 45.0%
! TTTGTCTGGTGGCTTTACTG+AGG + chr5_1:42556846-42556865 None:intergenic 45.0%
GAAACTGCAACTTTGTCTGG+TGG + chr5_1:42556857-42556876 None:intergenic 45.0%
AGTTGCAGTTTCAATGCCAC+TGG - chr5_1:42556865-42556884 Msa0731540:intron 45.0%
! TATAGAGTACTCGAGCTAGG+TGG + chr5_1:42556896-42556915 None:intergenic 45.0%
TTGTTCTTTGCATGACGGCT+TGG + chr5_1:42557011-42557030 None:intergenic 45.0%
TCTCTGTTTACCCTAGTCAG+CGG + chr5_1:42557066-42557085 None:intergenic 45.0%
!!! GTTTTTTGAGTGCTTCCCCT+GGG + chr5_1:42557231-42557250 None:intergenic 45.0%
!!! TGTTTTTTGAGTGCTTCCCC+TGG + chr5_1:42557232-42557251 None:intergenic 45.0%
!! GGGGAAGCACTCAAAAAACA+AGG - chr5_1:42557232-42557251 Msa0731540:intron 45.0%
GAATAAGATCCAAGACCAGG+TGG - chr5_1:42557315-42557334 Msa0731540:intron 45.0%
GGCTTATTATTGCAGCTGCA+AGG - chr5_1:42557348-42557367 Msa0731540:intron 45.0%
! TGCAAGGAGGCTCTGTTTTA+TGG - chr5_1:42557364-42557383 Msa0731540:intron 45.0%
AACAGTGCATTCAACCCTTG+GGG - chr5_1:42557404-42557423 Msa0731540:intron 45.0%
TTGCTTGGTCATCATCCTTC+AGG - chr5_1:42557445-42557464 Msa0731540:intron 45.0%
! GGTCATCATCCTTCAGGTTA+TGG - chr5_1:42557451-42557470 Msa0731540:intron 45.0%
CTAAATTCACCTCGTCCTCA+AGG + chr5_1:42557524-42557543 None:intergenic 45.0%
GAGGACGAGGTGAATTTAGT+TGG - chr5_1:42557525-42557544 Msa0731540:intron 45.0%
GACGAGGTGAATTTAGTTGG+TGG - chr5_1:42557528-42557547 Msa0731540:intron 45.0%
AGTGAATGGTTAGAAGGGAG+AGG - chr5_1:42557589-42557608 Msa0731540:intron 45.0%
GTGAATGGTTAGAAGGGAGA+GGG - chr5_1:42557590-42557609 Msa0731540:intron 45.0%
TGAATGGTTAGAAGGGAGAG+GGG - chr5_1:42557591-42557610 Msa0731540:intron 45.0%
GTAGTTCAAAGGAAGTGAGG+TGG - chr5_1:42557664-42557683 Msa0731540:intron 45.0%
GTGTCTGATGAGTGTGAAGT+CGG - chr5_1:42557696-42557715 Msa0731540:intron 45.0%
TGAGTGTGAAGTCGGAATTG+AGG - chr5_1:42557704-42557723 Msa0731540:intron 45.0%
GAGTGTGAAGTCGGAATTGA+GGG - chr5_1:42557705-42557724 Msa0731540:intron 45.0%
AGTGTGAAGTCGGAATTGAG+GGG - chr5_1:42557706-42557725 Msa0731540:intron 45.0%
TGTGGTGGCTTAACTGCATT+AGG + chr5_1:42558036-42558055 None:intergenic 45.0%
AGGCTATTCTGTTGATGTGG+TGG + chr5_1:42558051-42558070 None:intergenic 45.0%
!! GCCTTTGGAGACTATTTTCC+CGG - chr5_1:42558067-42558086 Msa0731540:intron 45.0%
ACCGGGAAAATAGTCTCCAA+AGG + chr5_1:42558071-42558090 None:intergenic 45.0%
TCAAGAGGGTTTACAACACC+GGG + chr5_1:42558088-42558107 None:intergenic 45.0%
GTCAAGAGGGTTTACAACAC+CGG + chr5_1:42558089-42558108 None:intergenic 45.0%
GTGTTGTAAACCCTCTTGAC+CGG - chr5_1:42558089-42558108 Msa0731540:intron 45.0%
! TAATTTTGTGGTCGGTCCCT+TGG - chr5_1:42558442-42558461 Msa0731540:intron 45.0%
! AATTTTGTGGTCGGTCCCTT+GGG - chr5_1:42558443-42558462 Msa0731540:intron 45.0%
TTAGTCCCTGGAGTTAACCA+GGG + chr5_1:42558823-42558842 None:intergenic 45.0%
TTTAGTCCCTGGAGTTAACC+AGG + chr5_1:42558824-42558843 None:intergenic 45.0%
CCAGGGACTAAAGTGATCAA+CGG - chr5_1:42558832-42558851 Msa0731540:intron 45.0%
GGACTAAAGTGATCAACGGA+AGG - chr5_1:42558836-42558855 Msa0731540:intron 45.0%
AATTAGCCCTCGATTGGTAG+AGG + chr5_1:42559427-42559446 None:intergenic 45.0%
GGAGGCAAGAGAAGTTAGTT+AGG + chr5_1:42559498-42559517 None:intergenic 45.0%
TTCACAGACTGCCAGTTCAT+AGG - chr5_1:42559590-42559609 Msa0731540:intron 45.0%
TGCCTGCACCACTAATATCA+TGG - chr5_1:42559814-42559833 Msa0731540:intron 45.0%
GTCCATGATATTAGTGGTGC+AGG + chr5_1:42559819-42559838 None:intergenic 45.0%
! GACTGTTTTGCTCATTCCTG+TGG - chr5_1:42559836-42559855 Msa0731540:intron 45.0%
CAGCTAGGGACACATCAAAA+AGG + chr5_1:42560091-42560110 None:intergenic 45.0%
CCTCCATCCAAACACACTTA+AGG + chr5_1:42560362-42560381 None:intergenic 45.0%
CCTTAAGTGTGTTTGGATGG+AGG - chr5_1:42560359-42560378 Msa0731540:intron 45.0%
TGTGTTTGGATGGAGGGTTT+AGG - chr5_1:42560366-42560385 Msa0731540:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG - chr5_1:42560370-42560389 Msa0731540:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + chr5_1:42560571-42560590 None:intergenic 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr5_1:42560573-42560592 None:intergenic 45.0%
! CTAAGGGTGTGTTTGGATTG+AGG + chr5_1:42560583-42560602 None:intergenic 45.0%
! AACAGAGCTAAGGGTGTGTT+TGG + chr5_1:42560590-42560609 None:intergenic 45.0%
!! AACACACCCTTAGCTCTGTT+AGG - chr5_1:42560590-42560609 Msa0731540:intron 45.0%
AGGCATCCTAACAGAGCTAA+GGG + chr5_1:42560599-42560618 None:intergenic 45.0%
! AAGGCATCCTAACAGAGCTA+AGG + chr5_1:42560600-42560619 None:intergenic 45.0%
GTGAAGTAGGCAAAGGTGAA+AGG + chr5_1:42560619-42560638 None:intergenic 45.0%
TGATGCAGTGAAGTAGGCAA+AGG + chr5_1:42560626-42560645 None:intergenic 45.0%
TTTGCCTACTTCACTGCATC+AGG - chr5_1:42560625-42560644 Msa0731540:intron 45.0%
TCTTCCTGATGCAGTGAAGT+AGG + chr5_1:42560632-42560651 None:intergenic 45.0%
ACTTCACTGCATCAGGAAGA+TGG - chr5_1:42560632-42560651 Msa0731540:intron 45.0%
CTCACGTCAGTGTACATAGT+TGG + chr5_1:42560848-42560867 None:intergenic 45.0%
ACTATGTACACTGACGTGAG+TGG - chr5_1:42560848-42560867 Msa0731540:intron 45.0%
CTATGTACACTGACGTGAGT+GGG - chr5_1:42560849-42560868 Msa0731540:intron 45.0%
GAACACTATCCAGTCAAACC+AGG - chr5_1:42560871-42560890 Msa0731540:intron 45.0%
GAAGAAAAAAACCCCAGGGA+GGG + chr5_1:42561029-42561048 None:intergenic 45.0%
AGAAGAAAAAAACCCCAGGG+AGG + chr5_1:42561030-42561049 None:intergenic 45.0%
AACAACAACCCAAAGGGCTA+TGG + chr5_1:42561108-42561127 None:intergenic 45.0%
ACCAATGTGTGTGCCATAGT+TGG - chr5_1:42561307-42561326 Msa0731540:CDS 45.0%
TCCAACTATGGCACACACAT+TGG + chr5_1:42561311-42561330 None:intergenic 45.0%
AATGTGTGTGCCATAGTTGG+AGG - chr5_1:42561310-42561329 Msa0731540:CDS 45.0%
!! AGCACATACCTTGCTGTTGT+TGG - chr5_1:42561565-42561584 Msa0731540:five_prime_UTR 45.0%
!! AAAAAAAAAAAAAACTTATT+TGG - chr5_1:42552649-42552668 Msa0731540:intron 5.0%
!! AAAAAAAAAAAAACTTATTT+GGG - chr5_1:42552650-42552669 Msa0731540:intron 5.0%
!! TTATAAAATAAAATTATTAC+AGG + chr5_1:42560187-42560206 None:intergenic 5.0%
!!! TAATTTTCATTTTTAAATTA+CGG + chr5_1:42560532-42560551 None:intergenic 5.0%
GGCTATAAGCCTAGATCAGG+TGG - chr5_1:42550350-42550369 Msa0731540:intron 50.0%
CGCATTCAACCACCTGATCT+AGG + chr5_1:42550362-42550381 None:intergenic 50.0%
AGATCAGGTGGTTGAATGCG+TGG - chr5_1:42550362-42550381 Msa0731540:intron 50.0%
!! AGATGGTGGAACGCAAGCTT+AGG - chr5_1:42550454-42550473 Msa0731540:intron 50.0%
GAACGCAAGCTTAGGTGGTT+TGG - chr5_1:42550462-42550481 Msa0731540:intron 50.0%
CTCGATGCCATGGACATTAG+CGG - chr5_1:42551186-42551205 Msa0731540:intron 50.0%
CTGCCTCCATGTCTTTGCAA+GGG + chr5_1:42551809-42551828 None:intergenic 50.0%
! ATCCTGTTATGGTGCTGAGG+CGG - chr5_1:42551856-42551875 Msa0731540:intron 50.0%
GGCGGTAAGCCATAAGGATA+AGG - chr5_1:42551874-42551893 Msa0731540:intron 50.0%
GAGCGCAATCTTGACAACCA+TGG + chr5_1:42552235-42552254 None:intergenic 50.0%
TTTGAACCGCTCCAACTTGG+TGG + chr5_1:42552297-42552316 None:intergenic 50.0%
!! ACAAAGAAGAGCGTTTGGCC+GGG - chr5_1:42552392-42552411 Msa0731540:intron 50.0%
AACTTTAAGCAACCCGCAGC+AGG + chr5_1:42552548-42552567 None:intergenic 50.0%
CGGGTTGCTTAAAGTTGCAG+AGG - chr5_1:42552552-42552571 Msa0731540:intron 50.0%
AGGCGGCTGTGTTATGTTGA+AGG - chr5_1:42552572-42552591 Msa0731540:intron 50.0%
!! GATTTTGACAACCATGGCGC+TGG - chr5_1:42552931-42552950 Msa0731540:intron 50.0%
!! GCGCTGGCTAATCCATGTAA+TGG - chr5_1:42552947-42552966 Msa0731540:intron 50.0%
TTTGCGCTTGCAGTCAGATG+AGG - chr5_1:42553060-42553079 Msa0731540:CDS 50.0%
TGCTTCACGAACTTCCTCAC+AGG + chr5_1:42553098-42553117 None:intergenic 50.0%
AAGCCCGGATTCAATTGACC+AGG - chr5_1:42553144-42553163 Msa0731540:intron 50.0%
CAGAGGGTTCTCAATGTGCT+TGG + chr5_1:42553325-42553344 Msa0731550:CDS 50.0%
CCTCCAAGAATTCGAGAGCT+TGG + chr5_1:42553576-42553595 None:intergenic 50.0%
CCAAGCTCTCGAATTCTTGG+AGG - chr5_1:42553573-42553592 Msa0731540:intron 50.0%
ATGCCACAATTTGACGGCAG+CGG - chr5_1:42553737-42553756 Msa0731540:intron 50.0%
CTATCCAACTCGCATGTGGA+TGG + chr5_1:42553898-42553917 None:intergenic 50.0%
AACGCTATCCAACTCGCATG+TGG + chr5_1:42553902-42553921 None:intergenic 50.0%
! GGATGGGTTTCACTCGAGTT+TGG - chr5_1:42554283-42554302 Msa0731540:intron 50.0%
TGGGTTTCACTCGAGTTTGG+CGG - chr5_1:42554286-42554305 Msa0731540:intron 50.0%
GCCAGATCCAGATGTGTTTG+TGG - chr5_1:42554333-42554352 Msa0731540:intron 50.0%
TGCCAGTTCGATCAAACCAG+AGG + chr5_1:42554374-42554393 None:intergenic 50.0%
!! TCAGACACTCTCTTTTGGGG+AGG + chr5_1:42554421-42554440 None:intergenic 50.0%
! TTCAAGTTATGGGACCCTGG+TGG - chr5_1:42554487-42554506 Msa0731540:intron 50.0%
CCTCCAAGAATTCGAGAGCT+TGG + chr5_1:42553576-42553595 None:intergenic 50.0%
CCAAGCTCTCGAATTCTTGG+AGG - chr5_1:42553573-42553592 Msa0731540:intron 50.0%
CTGAACTGCTGATAGGGACT+TGG + chr5_1:42554957-42554976 None:intergenic 50.0%
AGTGAGCAGTTAGTAGGGAG+AGG - chr5_1:42555830-42555849 Msa0731540:intron 50.0%
GTGAGCAGTTAGTAGGGAGA+GGG - chr5_1:42555831-42555850 Msa0731540:intron 50.0%
TGAGCAGTTAGTAGGGAGAG+GGG - chr5_1:42555832-42555851 Msa0731540:intron 50.0%
GGAATTCAGGGGCTGAGTAT+TGG - chr5_1:42555970-42555989 Msa0731540:intron 50.0%
!! GAGAGCACCCCTTCTATGAT+GGG + chr5_1:42556002-42556021 None:intergenic 50.0%
!! TGAGAGCACCCCTTCTATGA+TGG + chr5_1:42556003-42556022 None:intergenic 50.0%
GCTCAGATCCTTGGAGTTAC+TGG - chr5_1:42556176-42556195 Msa0731540:intron 50.0%
GAGATGAGGGAGATGGTAGT+AGG - chr5_1:42556238-42556257 Msa0731540:intron 50.0%
TGGTAGTAGGACAGAAACGC+AGG - chr5_1:42556251-42556270 Msa0731540:intron 50.0%
GGTAGTAGGACAGAAACGCA+GGG - chr5_1:42556252-42556271 Msa0731540:intron 50.0%
GTTGGATACCAGCTCGACTA+TGG - chr5_1:42556536-42556555 Msa0731540:intron 50.0%
TCACACATCCATAGTCGAGC+TGG + chr5_1:42556547-42556566 None:intergenic 50.0%
AGATCCAAGCTGGTCCACTA+TGG - chr5_1:42556597-42556616 Msa0731540:intron 50.0%
!! TTCTCCATAGTGGACCAGCT+TGG + chr5_1:42556604-42556623 None:intergenic 50.0%
AAGCTGGTCCACTATGGAGA+AGG - chr5_1:42556603-42556622 Msa0731540:intron 50.0%
TGGTCCACTATGGAGAAGGA+AGG - chr5_1:42556607-42556626 Msa0731540:intron 50.0%
GGTCCACTATGGAGAAGGAA+GGG - chr5_1:42556608-42556627 Msa0731540:intron 50.0%
ATGCCCTTCCTTCTCCATAG+TGG + chr5_1:42556614-42556633 None:intergenic 50.0%
GATGGGTCTTCAGTAACGAC+AGG - chr5_1:42556788-42556807 Msa0731540:intron 50.0%
CTTCAGTAACGACAGGGCTT+TGG - chr5_1:42556795-42556814 Msa0731540:intron 50.0%
GTTGTGAGGAACAGGTTGTC+TGG - chr5_1:42556916-42556935 Msa0731540:intron 50.0%
!! CTTTTAGGAGGGGGTCTCAT+GGG + chr5_1:42557128-42557147 None:intergenic 50.0%
!! TCTTTTAGGAGGGGGTCTCA+TGG + chr5_1:42557129-42557148 None:intergenic 50.0%
TGTCTCTAACCACCTGGTCT+TGG + chr5_1:42557327-42557346 None:intergenic 50.0%
AGACCAGGTGGTTAGAGACA+AGG - chr5_1:42557327-42557346 Msa0731540:intron 50.0%
! AAGCCTTGTCTCTAACCACC+TGG + chr5_1:42557333-42557352 None:intergenic 50.0%
TCTAGGGACCCATAACCTGA+AGG + chr5_1:42557463-42557482 None:intergenic 50.0%
CAAGTTTCACCTTGAGGACG+AGG - chr5_1:42557512-42557531 Msa0731540:intron 50.0%
!! TACAGGTGGCTCTTTGGGAT+TGG - chr5_1:42557630-42557649 Msa0731540:intron 50.0%
AGGAAGTGAGGTGGGAATGT+AGG - chr5_1:42557673-42557692 Msa0731540:intron 50.0%
GGAAGTGAGGTGGGAATGTA+GGG - chr5_1:42557674-42557693 Msa0731540:intron 50.0%
GGAATTGAGGGGCTGTGTAT+CGG - chr5_1:42557717-42557736 Msa0731540:intron 50.0%
GAATTGAGGGGCTGTGTATC+GGG - chr5_1:42557718-42557737 Msa0731540:intron 50.0%
AAAGAGCTCACCGGTCAAGA+GGG + chr5_1:42558102-42558121 None:intergenic 50.0%
TAAAGAGCTCACCGGTCAAG+AGG + chr5_1:42558103-42558122 None:intergenic 50.0%
TGGACACAAGAAACACCCAG+TGG - chr5_1:42558216-42558235 Msa0731540:intron 50.0%
GGACACAAGAAACACCCAGT+GGG - chr5_1:42558217-42558236 Msa0731540:intron 50.0%
GGAGTTAACCAGGGACGTTA+AGG + chr5_1:42558814-42558833 None:intergenic 50.0%
TAACGTCCCTGGTTAACTCC+AGG - chr5_1:42558814-42558833 Msa0731540:intron 50.0%
AACGTCCCTGGTTAACTCCA+GGG - chr5_1:42558815-42558834 Msa0731540:intron 50.0%
CCGTTGATCACTTTAGTCCC+TGG + chr5_1:42558835-42558854 None:intergenic 50.0%
TCCTCTCCTCTACCAATCGA+GGG - chr5_1:42559418-42559437 Msa0731540:intron 50.0%
TGCCAGTTCATAGGAGCTGT+CGG - chr5_1:42559599-42559618 Msa0731540:intron 50.0%
!! TCGTGTAAGATGGTGCTGAC+TGG - chr5_1:42559649-42559668 Msa0731540:intron 50.0%
!! TGTAAGATGGTGCTGACTGG+TGG - chr5_1:42559652-42559671 Msa0731540:intron 50.0%
!! GTAAGATGGTGCTGACTGGT+GGG - chr5_1:42559653-42559672 Msa0731540:intron 50.0%
GATGGTGATCGAAGTTGCCT+AGG + chr5_1:42559694-42559713 None:intergenic 50.0%
!! TGAAGGAGTGGTGTTACCAC+AGG + chr5_1:42559855-42559874 None:intergenic 50.0%
GTAACACCACTCCTTCAGTC+TGG - chr5_1:42559858-42559877 Msa0731540:intron 50.0%
!!! GTCTTTTGGGACGTCTCTCA+AGG - chr5_1:42560326-42560345 Msa0731540:intron 50.0%
GTTTGGATGGAGGGTTTAGG+AGG - chr5_1:42560369-42560388 Msa0731540:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG - chr5_1:42560371-42560390 Msa0731540:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG + chr5_1:42560566-42560585 None:intergenic 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG + chr5_1:42560567-42560586 None:intergenic 50.0%
!! CACTTTAGGACGGCAGATGT+AGG - chr5_1:42560992-42561011 Msa0731540:intron 50.0%
TGGTGGAACGCAAGCTTAGG+TGG - chr5_1:42550457-42550476 Msa0731540:intron 55.0%
CCTGCCTCCATGTCTTTGCA+AGG + chr5_1:42551810-42551829 None:intergenic 55.0%
CCTTGCAAAGACATGGAGGC+AGG - chr5_1:42551807-42551826 Msa0731540:intron 55.0%
! CGGATCCTGTTATGGTGCTG+AGG - chr5_1:42551853-42551872 Msa0731540:intron 55.0%
TACCGCCTCAGCACCATAAC+AGG + chr5_1:42551861-42551880 None:intergenic 55.0%
TGCTGAGGCGGTAAGCCATA+AGG - chr5_1:42551868-42551887 Msa0731540:intron 55.0%
! AAGCCTCCACCAAGTTGGAG+CGG - chr5_1:42552288-42552307 Msa0731540:intron 55.0%
!! AGCGAAACAGAGCGCCGATT+TGG + chr5_1:42552372-42552391 None:intergenic 55.0%
GGTTCGGAAACGGGTCATAC+GGG + chr5_1:42552422-42552441 None:intergenic 55.0%
! CGGTTCGGAAACGGGTCATA+CGG + chr5_1:42552423-42552442 None:intergenic 55.0%
CGTATGACCCGTTTCCGAAC+CGG - chr5_1:42552421-42552440 Msa0731540:intron 55.0%
!! AATCTGCGCCGGTTCGGAAA+CGG + chr5_1:42552432-42552451 None:intergenic 55.0%
TACAACCTGGGACGCGATTC+TGG + chr5_1:42552468-42552487 None:intergenic 55.0%
!! ACATGGATTAGCCAGCGCCA+TGG + chr5_1:42552945-42552964 None:intergenic 55.0%
TCACCGCTGCCGTCAAATTG+TGG + chr5_1:42553743-42553762 None:intergenic 55.0%
TGATGTCGTGGGAACACAGG+AGG - chr5_1:42553799-42553818 Msa0731540:intron 55.0%
GATGTCGTGGGAACACAGGA+GGG - chr5_1:42553800-42553819 Msa0731540:intron 55.0%
ACAGGAGGGTGAGAAGTTGC+TGG - chr5_1:42553814-42553833 Msa0731540:intron 55.0%
! TACGAGAGCACGGTTTCGCA+AGG + chr5_1:42553852-42553871 None:intergenic 55.0%
TGCGAAACCGTGCTCTCGTA+TGG - chr5_1:42553852-42553871 Msa0731540:intron 55.0%
GAAACCGTGCTCTCGTATGG+TGG - chr5_1:42553855-42553874 Msa0731540:intron 55.0%
ACTGCCACCATACGAGAGCA+CGG + chr5_1:42553862-42553881 None:intergenic 55.0%
GATGCCATCCACATGCGAGT+TGG - chr5_1:42553891-42553910 Msa0731540:intron 55.0%
ACATCTGGATCTGGCGGCTT+TGG + chr5_1:42554328-42554347 None:intergenic 55.0%
CGTACATGTGCATGACCTGC+TGG - chr5_1:42555656-42555675 Msa0731540:intron 55.0%
! ACTAGTGACCCTTTGGGGGT+TGG - chr5_1:42555871-42555890 Msa0731540:intron 55.0%
! GGTGTCGAAGCTCAGATCCT+TGG - chr5_1:42556167-42556186 Msa0731540:intron 55.0%
!! ATATGGAGGAGGCGTTGGAG+AGG - chr5_1:42556290-42556309 Msa0731540:intron 55.0%
GAGCAAGGGAGCAAGGAAGA+AGG - chr5_1:42556367-42556386 Msa0731540:intron 55.0%
CAAGGAAGAAGGCAGCAAGC+TGG - chr5_1:42556378-42556397 Msa0731540:intron 55.0%
CTTGATCTCCCTCACCTCTC+TGG + chr5_1:42556476-42556495 None:intergenic 55.0%
!! GGAAGGGCATCTGACGATGA+AGG - chr5_1:42556624-42556643 Msa0731540:intron 55.0%
TGCCCGAGATCCAAACCTGA+AGG + chr5_1:42556702-42556721 None:intergenic 55.0%
AGGTCACTGAGAGAGTGGGA+TGG - chr5_1:42556770-42556789 Msa0731540:intron 55.0%
GGTCACTGAGAGAGTGGGAT+GGG - chr5_1:42556771-42556790 Msa0731540:intron 55.0%
GAGCTAGGTGGTACAACCAG+TGG + chr5_1:42556884-42556903 None:intergenic 55.0%
TCGGGTGATTCCCATCTCAG+AGG - chr5_1:42557736-42557755 Msa0731540:intron 55.0%
CGGGTGATTCCCATCTCAGA+GGG - chr5_1:42557737-42557756 Msa0731540:intron 55.0%
GGGTGATTCCCATCTCAGAG+GGG - chr5_1:42557738-42557757 Msa0731540:intron 55.0%
!! GAGAGCAACCCCTCTGAGAT+GGG + chr5_1:42557749-42557768 None:intergenic 55.0%
! TGAGAGCAACCCCTCTGAGA+TGG + chr5_1:42557750-42557769 None:intergenic 55.0%
! ATCCTCTATGGGGGCGTGTA+AGG - chr5_1:42558732-42558751 Msa0731540:intron 55.0%
TACCTTACACGCCCCCATAG+AGG + chr5_1:42558737-42558756 None:intergenic 55.0%
TGCACTCTCCCCTTTCACAC+TGG - chr5_1:42559109-42559128 Msa0731540:intron 55.0%
CTCCTCTCCTCTACCAATCG+AGG - chr5_1:42559417-42559436 Msa0731540:intron 55.0%
AGCCGACAGCTCCTATGAAC+TGG + chr5_1:42559604-42559623 None:intergenic 55.0%
GGAAACAACAGCCACCACCT+AGG - chr5_1:42559674-42559693 Msa0731540:intron 55.0%
GATCGAAGTTGCCTAGGTGG+TGG + chr5_1:42559688-42559707 None:intergenic 55.0%
GGTGATCGAAGTTGCCTAGG+TGG + chr5_1:42559691-42559710 None:intergenic 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG - chr5_1:42560375-42560394 Msa0731540:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG - chr5_1:42560376-42560395 Msa0731540:intron 55.0%
! GAACGGGGCGTTTCGCGATT+TGG + chr5_1:42549584-42549603 None:intergenic 60.0%
GCACCAAGCCTCCACCAAGT+TGG - chr5_1:42552283-42552302 Msa0731540:intron 60.0%
! GCTCCAACTTGGTGGAGGCT+TGG + chr5_1:42552289-42552308 None:intergenic 60.0%
! GAACCGCTCCAACTTGGTGG+AGG + chr5_1:42552294-42552313 None:intergenic 60.0%
ACGGGTCATACGGGTCAACC+CGG + chr5_1:42552413-42552432 None:intergenic 60.0%
!! ATCTGCGCCGGTTCGGAAAC+GGG + chr5_1:42552431-42552450 None:intergenic 60.0%
ACACTGGTGCGAATCTGCGC+CGG + chr5_1:42552443-42552462 None:intergenic 60.0%
! GGACGCGATTCTGGCTACAC+TGG + chr5_1:42552459-42552478 None:intergenic 60.0%
TGTAGCCAGAATCGCGTCCC+AGG - chr5_1:42552460-42552479 Msa0731540:intron 60.0%
AGGTTGGGCACTCTCAAGCC+CGG - chr5_1:42553129-42553148 Msa0731540:intron 60.0%
ACGGCAGCGGTGACGCTTAT+TGG - chr5_1:42553750-42553769 Msa0731540:intron 60.0%
GCAGCGGTGACGCTTATTGG+TGG - chr5_1:42553753-42553772 Msa0731540:intron 60.0%
GGAGGGTGAGAAGTTGCTGG+AGG - chr5_1:42553817-42553836 Msa0731540:intron 60.0%
GGGTGAGAAGTTGCTGGAGG+CGG - chr5_1:42553820-42553839 Msa0731540:intron 60.0%
GTGCTCTCGTATGGTGGCAG+TGG - chr5_1:42553861-42553880 Msa0731540:intron 60.0%
CTCTCGTATGGTGGCAGTGG+TGG - chr5_1:42553864-42553883 Msa0731540:intron 60.0%
GCTTTGGCAACGGTGGAGGT+AGG + chr5_1:42554312-42554331 None:intergenic 60.0%
! GGATCTGGCGGCTTTGGCAA+CGG + chr5_1:42554322-42554341 None:intergenic 60.0%
! AGTGACCCTTTGGGGGTTGG+AGG - chr5_1:42555874-42555893 Msa0731540:intron 60.0%
! GTGACCCTTTGGGGGTTGGA+GGG - chr5_1:42555875-42555894 Msa0731540:intron 60.0%
CCAACCCTCCAACCCCCAAA+GGG + chr5_1:42555882-42555901 None:intergenic 60.0%
TCCAACCCTCCAACCCCCAA+AGG + chr5_1:42555883-42555902 None:intergenic 60.0%
TGGGGGTTGGAGGGTTGGAA+AGG - chr5_1:42555884-42555903 Msa0731540:intron 60.0%
GGGTTGGAGGGTTGGAAAGG+AGG - chr5_1:42555887-42555906 Msa0731540:intron 60.0%
GGAGGGTTGGAAAGGAGGTG+AGG - chr5_1:42555892-42555911 Msa0731540:intron 60.0%
AAGGATGTGAGGGGGAGCTG+AGG - chr5_1:42555923-42555942 Msa0731540:intron 60.0%
AGGATGTGAGGGGGAGCTGA+GGG - chr5_1:42555924-42555943 Msa0731540:intron 60.0%
!! TGCATGACGGCTTGGTCCGA+TGG + chr5_1:42557003-42557022 None:intergenic 60.0%
CAGAGGGGTTGCTCTCACTG+TGG - chr5_1:42557753-42557772 Msa0731540:intron 60.0%
GCCCTCGATTGGTAGAGGAG+AGG + chr5_1:42559422-42559441 None:intergenic 60.0%
GGTTTAGGAGGGGAAGGGAG+AGG - chr5_1:42560381-42560400 Msa0731540:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr5_1:42560381-42560400 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr5_1:42560380-42560399 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr5_1:42560379-42560398 None:intergenic 60.0%
!! GGTGCGAATCTGCGCCGGTT+CGG + chr5_1:42552438-42552457 None:intergenic 65.0%
! TCTGGCGGCTTTGGCAACGG+TGG + chr5_1:42554319-42554338 None:intergenic 65.0%
! CCCTTTGGGGGTTGGAGGGT+TGG - chr5_1:42555879-42555898 Msa0731540:intron 65.0%
GGATGTGAGGGGGAGCTGAG+GGG - chr5_1:42555925-42555944 Msa0731540:intron 65.0%
! GGGGGAGCTGAGGGGTATGA+TGG - chr5_1:42555933-42555952 Msa0731540:intron 65.0%
! GGTGCTAGCGCCGCTGACTA+GGG - chr5_1:42557053-42557072 Msa0731540:intron 65.0%
GCCGATTGCAGTCCCTCCCT+GGG - chr5_1:42561014-42561033 Msa0731540:intron 65.0%
CCCCAGGGAGGGACTGCAAT+CGG + chr5_1:42561018-42561037 None:intergenic 65.0%
CCGATTGCAGTCCCTCCCTG+GGG - chr5_1:42561015-42561034 Msa0731540:intron 65.0%
GCGGAGCGTACTGCGCACAG+AGG - chr5_1:42552331-42552350 Msa0731540:intron 70.0%
! GGCGGCTTTGGCAACGGTGG+AGG + chr5_1:42554316-42554335 None:intergenic 70.0%
! GGGTGCTAGCGCCGCTGACT+AGG - chr5_1:42557052-42557071 Msa0731540:intron 70.0%
GGCCGATTGCAGTCCCTCCC+TGG - chr5_1:42561013-42561032 Msa0731540:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 42549544 42561597 42549544 ID=Msa0731540;Name=Msa0731540
chr5_1 mRNA 42549544 42561597 42549544 ID=Msa0731540-mRNA-1;Parent=Msa0731540;Name=Msa0731540-mRNA-1;_AED=0.22;_eAED=0.29;_QI=195|0.90|0.91|1|0.81|0.91|12|0|372
chr5_1 exon 42549544 42549654 42549544 ID=Msa0731540-mRNA-1:exon:12281;Parent=Msa0731540-mRNA-1
chr5_1 exon 42550072 42550164 42550072 ID=Msa0731540-mRNA-1:exon:12280;Parent=Msa0731540-mRNA-1
chr5_1 exon 42550249 42550302 42550249 ID=Msa0731540-mRNA-1:exon:12279;Parent=Msa0731540-mRNA-1
chr5_1 exon 42552881 42552932 42552881 ID=Msa0731540-mRNA-1:exon:12278;Parent=Msa0731540-mRNA-1
chr5_1 exon 42553031 42553098 42553031 ID=Msa0731540-mRNA-1:exon:12277;Parent=Msa0731540-mRNA-1
chr5_1 exon 42555440 42555619 42555440 ID=Msa0731540-mRNA-1:exon:12276;Parent=Msa0731540-mRNA-1
chr5_1 exon 42557976 42558068 42557976 ID=Msa0731540-mRNA-1:exon:12275;Parent=Msa0731540-mRNA-1
chr5_1 exon 42559264 42559344 42559264 ID=Msa0731540-mRNA-1:exon:12274;Parent=Msa0731540-mRNA-1
chr5_1 exon 42559719 42559799 42559719 ID=Msa0731540-mRNA-1:exon:12273;Parent=Msa0731540-mRNA-1
chr5_1 exon 42559914 42559997 42559914 ID=Msa0731540-mRNA-1:exon:12272;Parent=Msa0731540-mRNA-1
chr5_1 exon 42561089 42561162 42561089 ID=Msa0731540-mRNA-1:exon:12271;Parent=Msa0731540-mRNA-1
chr5_1 exon 42561258 42561597 42561258 ID=Msa0731540-mRNA-1:exon:12270;Parent=Msa0731540-mRNA-1
chr5_1 five_prime_UTR 42561403 42561597 42561403 ID=Msa0731540-mRNA-1:five_prime_utr;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42561258 42561402 42561258 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42561089 42561162 42561089 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42559914 42559997 42559914 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42559719 42559799 42559719 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42559264 42559344 42559264 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42557976 42558068 42557976 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42555440 42555619 42555440 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42553031 42553098 42553031 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42552881 42552932 42552881 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42550249 42550302 42550249 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42550072 42550164 42550072 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
chr5_1 CDS 42549544 42549654 42549544 ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1
Gene Sequence

>Msa0731540

ATGATGGATACCATAATGAACAAGCTTCGTAATCTCGATGCATATCCTAAAATCAACGAAGATTTCTATAGTCGCACTCTTTCTGGCGGTCTTATCACTATCGTTTCTTCCATTCTCATGCTCTTGCTTTTCTTCTCCGAGCTTCGGTTGTATCTTCATGCTGCAACTGAAACTAAGCTTGTTGTAGATACTTCTAGAGGAGAAACGCTTCGTATTAATTTTGATGTTACATTTCCTGCACTAGCGTGTTCTATACTTAGTCTCGATGCCATGGACATTAGCGGAGAACAACATCTGGATGTAAGACATGATATAACCAAGAAAAGAATAGACTCTCATGGCAATGTGATAGAAACAAGGCAAGATGGAATCGGTTCTCCCAACATTGAAAAACCCTTGCAAAGACATGGAGGCAGGCTTGAGCACAATGAGACTTATTGCGGATCCTGTTATGGTGCTGAGGCGTCAGATGAGGAATGTTGTAATTCCTGTGAGGAAGTTCGTGAAGCATATCGAAAGAAAGGTTGGGCACTCTCAAGCCCGGATTCAATTGACCAGTGCAAAAGAGAAGGGTTCTTAGAAAGAATCAAGGAAGAAGAAGGTGAAGGATGCAATGTGTATGGCTTTTTGGAAGTAAACAAGGTGGCAGGGAATTTCCATTTTGCTCCTGGGAAAAGCTTTCAGCAATCTGGCGTACATGTGCATGACCTGCTGGCTTTTCAAAAGGAGTCATTTAATTTAAGCCACCACATCAACAGAATAGCCTTTGGAGACTATTTTCCCGGTGTTGTAAACCCTCTTGACCGTGTGCATTGGACACAAGAAACACCCAGTGGGATGTATCAGTATTTTATAAAGGTGGTACCAACTATGTACACTGACGTGAGTGGGAACACTATCCAGTCAAACCAGTTCTCTGTGACAGAACACTTTAGGACGGCAGATGTAGGCCGATTGCAGTCCCTCCCTGGGGTTTTTTTCTTCTACGACCTTTCTCCAATTAAGATTCATTTATCTATCATGGCCAAAAGGCTATCAAGAAGAAGATGGAACTCGGCAAATTTAGCTGATTGTTATTCTCTCAGCACATACCTTGCTGTTGTTGGAGTACTTTCC

Protein sequence

>Msa0731540

MMDTIMNKLRNLDAYPKINEDFYSRTLSGGLITIVSSILMLLLFFSELRLYLHAATETKLVVDTSRGETLRINFDVTFPALACSILSLDAMDISGEQHLDVRHDITKKRIDSHGNVIETRQDGIGSPNIEKPLQRHGGRLEHNETYCGSCYGAEASDEECCNSCEEVREAYRKKGWALSSPDSIDQCKREGFLERIKEEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKESFNLSHHINRIAFGDYFPGVVNPLDRVHWTQETPSGMYQYFIKVVPTMYTDVSGNTIQSNQFSVTEHFRTADVGRLQSLPGVFFFYDLSPIKIHLSIMAKRLSRRRWNSANLADCYSLSTYLAVVGVLS