Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0731540 | XP_003615024.1 | 98.806 | 335 | 4 | 0 | 2 | 336 | 1 | 335 | 0.0 | 699 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0731540 | sp|Q803I2|ERGI3_DANRE | 50.145 | 345 | 148 | 4 | 6 | 339 | 4 | 335 | 5.91e-126 | 370 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0731540 | G7KA80 | 98.806 | 335 | 4 | 0 | 2 | 336 | 1 | 335 | 0.0 | 699 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0731540 | Msa1440900 | 0.801238 | 9.896430e-49 | -8.615850e-47 |
Msa0140880 | Msa0731540 | 0.820743 | 5.838178e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0731540 | MtrunA17_Chr5g0425571 | 98.806 | 335 | 4 | 0 | 2 | 336 | 1 | 335 | 0.0 | 699 |
Msa0731540 | MtrunA17_Chr4g0050511 | 67.062 | 337 | 109 | 1 | 2 | 338 | 1 | 335 | 0.0 | 512 |
Msa0731540 | MtrunA17_Chr3g0120271 | 33.154 | 371 | 200 | 6 | 9 | 371 | 7 | 337 | 2.79e-60 | 198 |
Msa0731540 | MtrunA17_Chr4g0041801 | 38.318 | 107 | 65 | 1 | 7 | 112 | 5 | 111 | 3.41e-16 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0731540 | AT1G36050.2 | 80.000 | 335 | 67 | 0 | 2 | 336 | 1 | 335 | 0.0 | 598 |
Msa0731540 | AT1G36050.1 | 80.000 | 335 | 67 | 0 | 2 | 336 | 1 | 335 | 0.0 | 598 |
Msa0731540 | AT1G22200.1 | 76.418 | 335 | 79 | 0 | 2 | 336 | 1 | 335 | 0.0 | 565 |
Msa0731540 | AT1G22200.2 | 76.418 | 335 | 79 | 0 | 2 | 336 | 1 | 335 | 0.0 | 565 |
Msa0731540 | AT3G22290.2 | 33.690 | 374 | 200 | 11 | 5 | 371 | 3 | 335 | 5.21e-60 | 197 |
Msa0731540 | AT3G22290.1 | 33.690 | 374 | 200 | 11 | 5 | 371 | 3 | 335 | 5.21e-60 | 197 |
Msa0731540 | AT3G20560.1 | 40.187 | 107 | 63 | 1 | 8 | 113 | 6 | 112 | 8.07e-18 | 85.1 |
Msa0731540 | AT1G50950.2 | 39.815 | 108 | 64 | 1 | 7 | 113 | 5 | 112 | 5.71e-17 | 82.4 |
Msa0731540 | AT1G50950.1 | 39.815 | 108 | 64 | 1 | 7 | 113 | 5 | 112 | 6.35e-17 | 82.4 |
Msa0731540 | AT4G27080.1 | 37.963 | 108 | 66 | 1 | 7 | 113 | 5 | 112 | 2.95e-16 | 80.5 |
Msa0731540 | AT4G27080.2 | 38.614 | 101 | 61 | 1 | 14 | 113 | 64 | 164 | 6.15e-14 | 73.6 |
Find 92 sgRNAs with CRISPR-Local
Find 897 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTATAGTCGCACTCTTTC+TGG | 0.133582 | 5_1:-42561317 | Msa0731540:CDS |
AGCAAATCTCAAACAAAATT+TGG | 0.156381 | 5_1:-42561505 | Msa0731540:five_prime_UTR |
CTACGACCTTTCTCCAATTA+AGG | 0.195998 | 5_1:-42550071 | Msa0731540:intron |
TCATAATCATAATCAAAATT+AGG | 0.222925 | 5_1:-42561426 | Msa0731540:five_prime_UTR |
ATTACGAAGCTTGTTCATTA+TGG | 0.253518 | 5_1:+42561370 | None:intergenic |
TCTTCTTCTTGATAGCCTTT+TGG | 0.307819 | 5_1:+42549613 | None:intergenic |
GCTGTTGTTGGAGTACTTTC+CGG | 0.321260 | 5_1:-42549542 | None:intergenic |
GGCCGATTGCAGTCCCTCCC+TGG | 0.324323 | 5_1:-42550106 | Msa0731540:CDS |
AGCACATACCTTGCTGTTGT+TGG | 0.341824 | 5_1:-42549554 | Msa0731540:CDS |
TCTCTGTGACAGAACACTTT+AGG | 0.345410 | 5_1:-42550141 | Msa0731540:CDS |
GAACGGGGCGTTTCGCGATT+TGG | 0.352631 | 5_1:+42561538 | None:intergenic |
AAACAAAATTTGGATTGAAC+GGG | 0.358155 | 5_1:-42561495 | Msa0731540:five_prime_UTR |
TTAGATTCATTTATCTATCA+TGG | 0.373404 | 5_1:-42549636 | Msa0731540:intron |
TACCGCCTCAGCACCATAAC+AGG | 0.379587 | 5_1:+42559261 | None:intergenic |
TTGAGATTTGCTCTATCAAC+TGG | 0.383095 | 5_1:+42561516 | None:intergenic |
TTTGCTCTATCAACTGGAAC+GGG | 0.387685 | 5_1:+42561522 | None:intergenic |
GCCGATTGCAGTCCCTCCCT+GGG | 0.388413 | 5_1:-42550105 | Msa0731540:CDS |
GGGAAAAGCTTTCAGCAATC+TGG | 0.414672 | 5_1:-42555486 | Msa0731540:CDS |
CCCCAGGGAGGGACTGCAAT+CGG | 0.422047 | 5_1:+42550104 | None:intergenic |
CAAACCTGGTCAATTGAATC+CGG | 0.433588 | 5_1:+42557971 | None:intergenic |
GATCAATAACCTGGTTTGAC+TGG | 0.437886 | 5_1:+42550239 | None:intergenic |
ACTTATTGCGGATCCTGTTA+TGG | 0.450203 | 5_1:-42559274 | Msa0731540:CDS |
TTCGATTTCGATCTTCATGA+TGG | 0.458620 | 5_1:-42561396 | Msa0731540:exon |
TTGGAAGTAAACAAGGTGGC+AGG | 0.459413 | 5_1:-42555528 | Msa0731540:CDS |
CGTACATGTGCATGACCTGC+TGG | 0.468545 | 5_1:-42555463 | Msa0731540:CDS |
CTGCCTCCATGTCTTTGCAA+GGG | 0.472630 | 5_1:+42559313 | None:intergenic |
GAAAAGCAAGAGCATGAGAA+TGG | 0.476070 | 5_1:+42561271 | None:intergenic |
CACATCAACAGAATAGCCTT+TGG | 0.482453 | 5_1:-42553067 | Msa0731540:CDS |
CCTGCCTCCATGTCTTTGCA+AGG | 0.483999 | 5_1:+42559312 | None:intergenic |
CATTAGCGGAGAACAACATC+TGG | 0.491394 | 5_1:-42559919 | Msa0731540:CDS |
GAAAGAGAAATTACGAAGCT+CGG | 0.495749 | 5_1:+42561244 | None:intergenic |
GAAAGAATCAAGGAAGAAGA+AGG | 0.501222 | 5_1:-42555576 | Msa0731540:CDS |
CAAACAAAATTTGGATTGAA+CGG | 0.501951 | 5_1:-42561496 | Msa0731540:five_prime_UTR |
AAGCATATCGAAAGAAAGGT+TGG | 0.504184 | 5_1:-42558006 | Msa0731540:CDS |
CGTGAAGCATATCGAAAGAA+AGG | 0.504663 | 5_1:-42558010 | Msa0731540:CDS |
GAAACAAGGCAAGATGGAAT+CGG | 0.513498 | 5_1:-42559729 | Msa0731540:CDS |
ATTTATCTATCATGGCCAAA+AGG | 0.514131 | 5_1:-42549628 | Msa0731540:CDS |
TTTCGCGATTTGGTTGAAGC+AGG | 0.527853 | 5_1:+42561548 | None:intergenic |
GTGATAGAAACAAGGCAAGA+TGG | 0.530527 | 5_1:-42559735 | Msa0731540:CDS |
TCTTGATTATCAGTGTGCAT+TGG | 0.532026 | 5_1:-42552923 | Msa0731540:intron |
AAAACACCTTAATTGGAGAA+AGG | 0.535317 | 5_1:+42550065 | None:intergenic |
AAAGGCTATCAAGAAGAAGA+TGG | 0.538983 | 5_1:-42549610 | Msa0731540:CDS |
TTGTTCTCCGCTAATGTCCA+TGG | 0.540332 | 5_1:+42559926 | None:intergenic |
CTCGATGCCATGGACATTAG+CGG | 0.540952 | 5_1:-42559933 | Msa0731540:CDS |
GTCAAGAGGGTTTACAACAC+CGG | 0.543744 | 5_1:+42553033 | None:intergenic |
CTCACGTCAGTGTACATAGT+TGG | 0.544532 | 5_1:+42550274 | None:intergenic |
ATCACTTAGTGCAAAAGAGA+AGG | 0.545278 | 5_1:-42555606 | Msa0731540:intron |
AGGGTTCTTAGAAAGAATCA+AGG | 0.554292 | 5_1:-42555586 | Msa0731540:CDS |
AAAATACTGATACATCCCAC+TGG | 0.555074 | 5_1:+42552887 | None:intergenic |
AGCATATCGAAAGAAAGGTT+GGG | 0.557532 | 5_1:-42558005 | Msa0731540:CDS |
CCTTGCAAAGACATGGAGGC+AGG | 0.557759 | 5_1:-42559312 | Msa0731540:CDS |
AGGCTATTCTGTTGATGTGG+TGG | 0.558845 | 5_1:+42553071 | None:intergenic |
AGTATAGAACACGCTAGTGC+AGG | 0.559960 | 5_1:+42559960 | None:intergenic |
TATACTTAGTCTCGATGCCA+TGG | 0.561660 | 5_1:-42559943 | Msa0731540:CDS |
GGTGAAGGATGCAATGTGTA+TGG | 0.569301 | 5_1:-42555555 | Msa0731540:CDS |
GTGTTGTAAACCCTCTTGAC+CGG | 0.574958 | 5_1:-42553030 | Msa0731540:intron |
AGGTTGGGCACTCTCAAGCC+CGG | 0.575134 | 5_1:-42557990 | Msa0731540:CDS |
AAACCTGGTCAATTGAATCC+GGG | 0.575289 | 5_1:+42557972 | None:intergenic |
AAGCCCGGATTCAATTGACC+AGG | 0.575812 | 5_1:-42557975 | Msa0731540:intron |
ATCAAGGAAGAAGAAGGTGA+AGG | 0.577027 | 5_1:-42555570 | Msa0731540:CDS |
AAGAAAAGAATAGACTCTCA+TGG | 0.579216 | 5_1:-42559762 | Msa0731540:CDS |
CAAAGGCTATTCTGTTGATG+TGG | 0.582521 | 5_1:+42553068 | None:intergenic |
TAAAGAGCTCACCGGTCAAG+AGG | 0.585229 | 5_1:+42553019 | None:intergenic |
TCAAGAGGGTTTACAACACC+GGG | 0.589163 | 5_1:+42553034 | None:intergenic |
TGCTTCACGAACTTCCTCAC+AGG | 0.590612 | 5_1:+42558024 | None:intergenic |
TCACTTAGTGCAAAAGAGAA+GGG | 0.593153 | 5_1:-42555605 | Msa0731540:intron |
TGGAAGTAAACAAGGTGGCA+GGG | 0.593479 | 5_1:-42555527 | Msa0731540:CDS |
ATCAAGAAGAAGATGGAACT+CGG | 0.594892 | 5_1:-42549603 | Msa0731540:CDS |
TTTGCGCTTGCAGTCAGATG+AGG | 0.596325 | 5_1:-42558059 | Msa0731540:intron |
CACTTTAGGACGGCAGATGT+AGG | 0.596476 | 5_1:-42550127 | Msa0731540:CDS |
CTTGTTGTAGATACTTCTAG+AGG | 0.598128 | 5_1:-42561108 | Msa0731540:CDS |
GAGCACAATGAGACTTATTG+CGG | 0.606344 | 5_1:-42559286 | Msa0731540:CDS |
CTATGTACACTGACGTGAGT+GGG | 0.606656 | 5_1:-42550270 | Msa0731540:CDS |
ATTTGCTCTATCAACTGGAA+CGG | 0.609514 | 5_1:+42561521 | None:intergenic |
AAAGAGCTCACCGGTCAAGA+GGG | 0.621153 | 5_1:+42553020 | None:intergenic |
ATCCTGTTATGGTGCTGAGG+CGG | 0.626803 | 5_1:-42559263 | Msa0731540:intron |
TATAGTCGCACTCTTTCTGG+CGG | 0.635746 | 5_1:-42561314 | Msa0731540:CDS |
GAACACTATCCAGTCAAACC+AGG | 0.636074 | 5_1:-42550248 | Msa0731540:intron |
ACCGGGAAAATAGTCTCCAA+AGG | 0.641478 | 5_1:+42553051 | None:intergenic |
CGGATCCTGTTATGGTGCTG+AGG | 0.643851 | 5_1:-42559266 | Msa0731540:CDS |
AACAAAATTTGGATTGAACG+GGG | 0.658205 | 5_1:-42561494 | Msa0731540:five_prime_UTR |
AAATACTGATACATCCCACT+GGG | 0.661329 | 5_1:+42552888 | None:intergenic |
TGTGACAGAACACTTTAGGA+CGG | 0.663702 | 5_1:-42550137 | Msa0731540:CDS |
ACTATGTACACTGACGTGAG+TGG | 0.665706 | 5_1:-42550271 | Msa0731540:CDS |
AAAGTACTCCAACAACAGCA+AGG | 0.667437 | 5_1:+42549546 | None:intergenic |
CCGATTGCAGTCCCTCCCTG+GGG | 0.667693 | 5_1:-42550104 | Msa0731540:CDS |
TTGCTCTATCAACTGGAACG+GGG | 0.676838 | 5_1:+42561523 | None:intergenic |
ATGGCAATGTGATAGAAACA+AGG | 0.687509 | 5_1:-42559743 | Msa0731540:CDS |
AAACCCTTGCAAAGACATGG+AGG | 0.692409 | 5_1:-42559316 | Msa0731540:CDS |
GGACACAAGAAACACCCAGT+GGG | 0.693082 | 5_1:-42552902 | Msa0731540:CDS |
TGGACACAAGAAACACCCAG+TGG | 0.786125 | 5_1:-42552903 | Msa0731540:CDS |
GGAATGTTGTAATTCCTGTG+AGG | 0.801380 | 5_1:-42558038 | Msa0731540:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTTTTAT+AGG | - | chr5_1:42550329-42550348 | Msa0731540:intron | 0.0% |
!!! | TGTTTAAATTTTTATATTGT+TGG | - | chr5_1:42550062-42550081 | Msa0731540:intron | 10.0% |
!!! | AATGCATTTTTATTTTATAT+CGG | - | chr5_1:42551470-42551489 | Msa0731540:intron | 10.0% |
!!! | TTTTTTTTTTTTTTGTACAA+TGG | + | chr5_1:42552643-42552662 | None:intergenic | 10.0% |
!! | AATTCATAATAGTTTAATAT+AGG | + | chr5_1:42552783-42552802 | None:intergenic | 10.0% |
!!! | TTATAATTTTTTCTATTTAG+TGG | - | chr5_1:42552843-42552862 | Msa0731540:intron | 10.0% |
!!! | TATAATTTTTTCTATTTAGT+GGG | - | chr5_1:42552844-42552863 | Msa0731540:intron | 10.0% |
!! | TGTTCAAAAAAAAAAAAAAA+AGG | + | chr5_1:42554983-42555002 | None:intergenic | 10.0% |
!! | CAAAAAAAAAAAAAAATAGA+AGG | + | chr5_1:42555014-42555033 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTTTTGAAGA+AGG | - | chr5_1:42555018-42555037 | Msa0731540:intron | 10.0% |
!!! | ACTAATTTGTTAAATATAAT+TGG | - | chr5_1:42555405-42555424 | Msa0731540:intron | 10.0% |
!! | TTTGAAAAATAAAGAATTAT+TGG | + | chr5_1:42559019-42559038 | None:intergenic | 10.0% |
!!! | TAATTCTTTATTTTTCAAAA+TGG | - | chr5_1:42559020-42559039 | Msa0731540:intron | 10.0% |
!!! | AATTCTTTATTTTTCAAAAT+GGG | - | chr5_1:42559021-42559040 | Msa0731540:intron | 10.0% |
!! | TAACATTTACATTTAATTAA+TGG | - | chr5_1:42560285-42560304 | Msa0731540:intron | 10.0% |
!! | TCATAATCATAATCAAAATT+AGG | - | chr5_1:42549693-42549712 | Msa0731540:intron | 15.0% |
!!! | TTCATTTTCGTTTTTTTTTT+TGG | - | chr5_1:42549944-42549963 | Msa0731540:intron | 15.0% |
!!! | TCATTTTCGTTTTTTTTTTT+GGG | - | chr5_1:42549945-42549964 | Msa0731540:intron | 15.0% |
!!! | AGTAATAATCTTTTCATTTT+TGG | - | chr5_1:42551517-42551536 | Msa0731540:intron | 15.0% |
!! | TTATAATTATAATAGCTAGA+AGG | + | chr5_1:42552097-42552116 | None:intergenic | 15.0% |
!!! | TAATAGATGATACAATTTTA+TGG | - | chr5_1:42552203-42552222 | Msa0731540:intron | 15.0% |
!! | CAGTTTATTTATATTTATGT+AGG | + | chr5_1:42552682-42552701 | None:intergenic | 15.0% |
!! | TAATAAAAATGCTACTATAA+AGG | + | chr5_1:42555185-42555204 | Msa0731560:CDS | 15.0% |
!! | CTATTTGTAATGAATAATTA+TGG | - | chr5_1:42555259-42555278 | Msa0731540:intron | 15.0% |
!!! | GTTATTTGTTTCTATTAAAT+TGG | - | chr5_1:42556146-42556165 | Msa0731540:intron | 15.0% |
!! | TTCAAAATTTAGTGTATATA+TGG | - | chr5_1:42558317-42558336 | Msa0731540:intron | 15.0% |
!! | TCAAAATTTAGTGTATATAT+GGG | - | chr5_1:42558318-42558337 | Msa0731540:intron | 15.0% |
!! | GAATGAAATAAAATTTAAAC+AGG | + | chr5_1:42558692-42558711 | None:intergenic | 15.0% |
!!! | TAATTGTTTTCATTAAAATC+AGG | - | chr5_1:42558873-42558892 | Msa0731540:intron | 15.0% |
!!! | AATTGTTTTCATTAAAATCA+GGG | - | chr5_1:42558874-42558893 | Msa0731540:intron | 15.0% |
!!! | TACTGATTATTATTTTGATT+TGG | + | chr5_1:42559302-42559321 | None:intergenic | 15.0% |
!!! | GACTTTTCATTTTTAAATTA+CGG | - | chr5_1:42560403-42560422 | Msa0731540:intron | 15.0% |
!!! | AATAAAAAGTGAAAATGTTT+TGG | - | chr5_1:42560951-42560970 | Msa0731540:intron | 15.0% |
!!! | AACTGATTTAGAATTATTTT+TGG | + | chr5_1:42561188-42561207 | None:intergenic | 15.0% |
!! | ATAAGTTAATTATCCAAACA+AGG | + | chr5_1:42550211-42550230 | None:intergenic | 20.0% |
!! | TGTTTGGATAATTAACTTAT+TGG | - | chr5_1:42550211-42550230 | Msa0731540:intron | 20.0% |
!! | AGATTTGAAAATTAATGAGT+TGG | - | chr5_1:42550594-42550613 | Msa0731540:intron | 20.0% |
!! | TACTTTATCTTCTCTTATAA+AGG | + | chr5_1:42550875-42550894 | None:intergenic | 20.0% |
!! | TATAAGAGAAGATAAAGTAA+AGG | - | chr5_1:42550876-42550895 | Msa0731540:intron | 20.0% |
!! | AAATAAGGTGAAAACAATTT+AGG | - | chr5_1:42550958-42550977 | Msa0731540:intron | 20.0% |
!! | GTATGTATAATAGAAAAACT+CGG | - | chr5_1:42551228-42551247 | Msa0731540:intron | 20.0% |
!! | GTTTGTGAAAACTAAATAAA+AGG | + | chr5_1:42551565-42551584 | None:intergenic | 20.0% |
!!! | TTATTTAGTTTTCACAAACT+TGG | - | chr5_1:42551566-42551585 | Msa0731540:intron | 20.0% |
!!! | TTAAAAGACATTTTCTCTTT+AGG | - | chr5_1:42551603-42551622 | Msa0731540:intron | 20.0% |
!! | ATATCAACTAATAAGAAATC+TGG | - | chr5_1:42551973-42551992 | Msa0731540:intron | 20.0% |
!! | TTATGAAAACTTATTTGAGT+TGG | - | chr5_1:42552018-42552037 | Msa0731540:intron | 20.0% |
!! | AACCTATTATGAGATATTTA+TGG | - | chr5_1:42552158-42552177 | Msa0731540:intron | 20.0% |
!! | ATCTATTAAAAATCCAAACT+AGG | + | chr5_1:42552191-42552210 | None:intergenic | 20.0% |
!! | ATAAACTGTTATGACTTATT+TGG | - | chr5_1:42552694-42552713 | Msa0731540:intron | 20.0% |
!! | TAAACTGTTATGACTTATTT+GGG | - | chr5_1:42552695-42552714 | Msa0731540:intron | 20.0% |
!!! | AAAAGTCTTTTTTTTGTACT+CGG | + | chr5_1:42552722-42552741 | None:intergenic | 20.0% |
!!! | TACAAAAAAAAGACTTTTGT+GGG | - | chr5_1:42552724-42552743 | Msa0731540:intron | 20.0% |
!!! | AAAATGTTTTTTATAGGTCT+AGG | + | chr5_1:42552750-42552769 | None:intergenic | 20.0% |
!!! | TAGACCTATAAAAAACATTT+TGG | - | chr5_1:42552749-42552768 | Msa0731540:intron | 20.0% |
!!! | GTAACCAAAATGTTTTTTAT+AGG | + | chr5_1:42552756-42552775 | None:intergenic | 20.0% |
!! | ATCGTTGACAAATATATTAT+GGG | - | chr5_1:42553225-42553244 | Msa0731540:intron | 20.0% |
!! | AAATTGCCTAGAAAAATTAT+CGG | - | chr5_1:42554256-42554275 | Msa0731540:intron | 20.0% |
!! | TTATGTAGTAACATAATAGA+AGG | + | chr5_1:42555050-42555069 | Msa0731560:CDS | 20.0% |
!! | TACAAACTAATGATTGTTTA+CGG | + | chr5_1:42555231-42555250 | Msa0731560:CDS | 20.0% |
!! | TACAATATGAATAAAACAGA+TGG | + | chr5_1:42556071-42556090 | None:intergenic | 20.0% |
!!! | GTTTTATTCATATTGTATAG+AGG | - | chr5_1:42556074-42556093 | Msa0731540:intron | 20.0% |
!!! | CTTCATAAGTATTCAATTTT+AGG | - | chr5_1:42556750-42556769 | Msa0731540:intron | 20.0% |
!! | TAATTTGGGAAAAATGAAAA+GGG | - | chr5_1:42557100-42557119 | Msa0731540:intron | 20.0% |
!! | AAAGTGAGGAATATAAAATA+TGG | - | chr5_1:42557277-42557296 | Msa0731540:intron | 20.0% |
!!! | GAAATTATAACAAAAAGTAC+AGG | - | chr5_1:42557613-42557632 | Msa0731540:intron | 20.0% |
!!! | GATGTATCAGTATTTTATAA+AGG | - | chr5_1:42558239-42558258 | Msa0731540:intron | 20.0% |
!! | GAAAACAATTAAATCTTTGA+CGG | + | chr5_1:42558864-42558883 | None:intergenic | 20.0% |
!! | GGAGATAGAATTTAATAATT+GGG | + | chr5_1:42559401-42559420 | None:intergenic | 20.0% |
!! | AGGAGATAGAATTTAATAAT+TGG | + | chr5_1:42559402-42559421 | None:intergenic | 20.0% |
!! | AACAATCGAAAAAATGAAAA+TGG | + | chr5_1:42559731-42559750 | None:intergenic | 20.0% |
!! | TTGATAAAAGGAAAAAACAT+GGG | + | chr5_1:42559897-42559916 | None:intergenic | 20.0% |
!! | ATTGATAAAAGGAAAAAACA+TGG | + | chr5_1:42559898-42559917 | None:intergenic | 20.0% |
!! | TTTAAAAATACATACAGCTA+GGG | + | chr5_1:42560105-42560124 | None:intergenic | 20.0% |
!!! | TTTTAAAAATACATACAGCT+AGG | + | chr5_1:42560106-42560125 | None:intergenic | 20.0% |
!!! | AAAACATACTATAGTTTTAC+TGG | + | chr5_1:42560775-42560794 | None:intergenic | 20.0% |
!! | AATAAGAAAAACACCTTAAT+TGG | + | chr5_1:42561064-42561083 | None:intergenic | 20.0% |
!! | TTAGATTCATTTATCTATCA+TGG | - | chr5_1:42561483-42561502 | Msa0731540:five_prime_UTR | 20.0% |
! | AGCAAATCTCAAACAAAATT+TGG | - | chr5_1:42549614-42549633 | Msa0731540:CDS | 25.0% |
! | CAAACAAAATTTGGATTGAA+CGG | - | chr5_1:42549623-42549642 | Msa0731540:CDS | 25.0% |
! | AAACAAAATTTGGATTGAAC+GGG | - | chr5_1:42549624-42549643 | Msa0731540:CDS | 25.0% |
!!! | TAGAAATCTTCGTTGATTTT+AGG | + | chr5_1:42549787-42549806 | None:intergenic | 25.0% |
! | TGCATAAAAAAAAAAGACGA+TGG | + | chr5_1:42549908-42549927 | None:intergenic | 25.0% |
! | ATTGTGAATTTGTGATGTTA+TGG | - | chr5_1:42550119-42550138 | Msa0731540:CDS | 25.0% |
!! | GAACTATAGATTTTGTAGTA+AGG | - | chr5_1:42550499-42550518 | Msa0731540:intron | 25.0% |
!!! | AGCTTTTTCATTAGATATCT+TGG | - | chr5_1:42550723-42550742 | Msa0731540:intron | 25.0% |
! | GAAGATAAAGTAAAGGTAAA+TGG | - | chr5_1:42550883-42550902 | Msa0731540:intron | 25.0% |
! | TCAAATAAGTAAATCCAAAC+AGG | - | chr5_1:42551050-42551069 | Msa0731540:intron | 25.0% |
! | TTTCAACATCAAAACAACAA+TGG | + | chr5_1:42551118-42551137 | None:intergenic | 25.0% |
!! | TTTGGTTTCTATATATCACA+TGG | - | chr5_1:42551535-42551554 | Msa0731540:intron | 25.0% |
!!! | GGAAGTGATTTTTTTATCAA+TGG | - | chr5_1:42551624-42551643 | Msa0731540:intron | 25.0% |
! | ATATAACATCCTTATCCTTA+TGG | + | chr5_1:42551886-42551905 | None:intergenic | 25.0% |
! | AAATGTTCATAGAAAACTGT+AGG | - | chr5_1:42552133-42552152 | Msa0731540:intron | 25.0% |
! | AGCCATAAATATCTCATAAT+AGG | + | chr5_1:42552163-42552182 | None:intergenic | 25.0% |
! | ATTTATATTTATGTAGGTCC+AGG | + | chr5_1:42552676-42552695 | None:intergenic | 25.0% |
!!! | AAAGTCTTTTTTTTGTACTC+GGG | + | chr5_1:42552721-42552740 | None:intergenic | 25.0% |
!! | GTACAAAAAAAAGACTTTTG+TGG | - | chr5_1:42552723-42552742 | Msa0731540:intron | 25.0% |
!! | ATTAAGTTTTTCCCATTACA+TGG | + | chr5_1:42552962-42552981 | None:intergenic | 25.0% |
! | CATCGTTGACAAATATATTA+TGG | - | chr5_1:42553224-42553243 | Msa0731540:intron | 25.0% |
! | GTACTTATAAACTGTATACT+TGG | + | chr5_1:42553302-42553321 | None:intergenic | 25.0% |
! | GTATTATAAATAAGATGCAG+AGG | - | chr5_1:42553503-42553522 | Msa0731540:intron | 25.0% |
! | GTATTATAAATAAGATGCAG+AGG | - | chr5_1:42553503-42553522 | Msa0731540:intron | 25.0% |
! | ATAAAGGAAACAAGATTTGT+CGG | + | chr5_1:42555169-42555188 | Msa0731560:CDS | 25.0% |
!!! | ACAATCATTAGTTTGTAATG+CGG | - | chr5_1:42555234-42555253 | Msa0731540:intron | 25.0% |
! | TAAGATTAACTCCTTGTAAA+TGG | + | chr5_1:42555291-42555310 | None:intergenic | 25.0% |
!! | TTACTTGTGTTTTCAAAGAA+TGG | - | chr5_1:42555331-42555350 | Msa0731540:intron | 25.0% |
! | ACCTTCAATTTATATATGCA+TGG | - | chr5_1:42555374-42555393 | Msa0731540:intron | 25.0% |
! | TCCATGCATATATAAATTGA+AGG | + | chr5_1:42555378-42555397 | None:intergenic | 25.0% |
! | ATATACAAGTTATACAGACA+GGG | + | chr5_1:42555451-42555470 | None:intergenic | 25.0% |
!! | ATATGATTTTTGTTCTCAGA+TGG | - | chr5_1:42555712-42555731 | Msa0731540:intron | 25.0% |
! | TAGAATTAATGACAAACAGA+TGG | + | chr5_1:42556102-42556121 | None:intergenic | 25.0% |
! | TACTGGTACTATTAAATGAA+TGG | - | chr5_1:42556193-42556212 | Msa0731540:intron | 25.0% |
! | GTTGAAGAACAAATAATTAC+TGG | - | chr5_1:42556428-42556447 | Msa0731540:intron | 25.0% |
! | TTGTCTGGATATAGAATAAT+TGG | - | chr5_1:42556931-42556950 | Msa0731540:intron | 25.0% |
! | AAAGAGGAAGAAAAGTAATT+TGG | - | chr5_1:42557085-42557104 | Msa0731540:intron | 25.0% |
! | AAGAGGAAGAAAAGTAATTT+GGG | - | chr5_1:42557086-42557105 | Msa0731540:intron | 25.0% |
! | GTAATTTGGGAAAAATGAAA+AGG | - | chr5_1:42557099-42557118 | Msa0731540:intron | 25.0% |
! | ACAGCAAAATAAATTCTCTA+GGG | + | chr5_1:42557479-42557498 | None:intergenic | 25.0% |
!! | ATTATAACAAAAAGTACAGG+TGG | - | chr5_1:42557616-42557635 | Msa0731540:intron | 25.0% |
!!! | GTTTTATTCATCTTGTATAG+AGG | - | chr5_1:42557842-42557861 | Msa0731540:intron | 25.0% |
! | AGAATGATAAGTGAAACTAT+TGG | + | chr5_1:42557901-42557920 | None:intergenic | 25.0% |
! | TCTTAAAATATGATGACTGA+TGG | + | chr5_1:42557999-42558018 | None:intergenic | 25.0% |
! | ACTGATAATCAAGAAAATGT+TGG | + | chr5_1:42558190-42558209 | None:intergenic | 25.0% |
! | AATAACAAAGTTACAAATGG+TGG | + | chr5_1:42558395-42558414 | None:intergenic | 25.0% |
! | AGCAATAACAAAGTTACAAA+TGG | + | chr5_1:42558398-42558417 | None:intergenic | 25.0% |
!!! | AACTTTGTTATTGCTTCTAT+TGG | - | chr5_1:42558403-42558422 | Msa0731540:intron | 25.0% |
! | GTTGCATTTGTAACAATTTA+CGG | - | chr5_1:42558467-42558486 | Msa0731540:intron | 25.0% |
!! | CTATTAGTGATGAAACTTTT+TGG | - | chr5_1:42558564-42558583 | Msa0731540:intron | 25.0% |
! | TCTTTCTATATATCCTCTAT+GGG | - | chr5_1:42558721-42558740 | Msa0731540:intron | 25.0% |
! | TACTCAATTATGTTCAATTG+TGG | + | chr5_1:42558967-42558986 | None:intergenic | 25.0% |
! | TAAGAAGTGAATATTAGTGA+TGG | - | chr5_1:42559193-42559212 | Msa0731540:intron | 25.0% |
! | AAGACTTAATCCCTATTTAT+AGG | - | chr5_1:42559248-42559267 | Msa0731540:intron | 25.0% |
! | AGACTTAATCCCTATTTATA+GGG | - | chr5_1:42559249-42559268 | Msa0731540:intron | 25.0% |
!!! | AAAGAGTATCCCTATAAATA+GGG | + | chr5_1:42559261-42559280 | None:intergenic | 25.0% |
!!! | TTTTGATTTGGTCTTGATTT+AGG | + | chr5_1:42559290-42559309 | None:intergenic | 25.0% |
!!! | TGAGATTTGAGTTTGTTATT+AGG | + | chr5_1:42559338-42559357 | None:intergenic | 25.0% |
! | AAATGTAAATGTAGTGCTAA+TGG | - | chr5_1:42559558-42559577 | Msa0731540:intron | 25.0% |
! | AATGTAAATGTAGTGCTAAT+GGG | - | chr5_1:42559559-42559578 | Msa0731540:intron | 25.0% |
!!! | ATGGTATCTGTTTTATTTGA+TGG | + | chr5_1:42559712-42559731 | None:intergenic | 25.0% |
! | ACATGTGAGAAATTGATAAA+AGG | + | chr5_1:42559909-42559928 | None:intergenic | 25.0% |
! | TTTATCAATTTCTCACATGT+AGG | - | chr5_1:42559909-42559928 | Msa0731540:intron | 25.0% |
! | GTTGTTGCTAAATGATAATA+GGG | + | chr5_1:42560019-42560038 | None:intergenic | 25.0% |
! | TGTTGTTGCTAAATGATAAT+AGG | + | chr5_1:42560020-42560039 | None:intergenic | 25.0% |
! | ATTATTACAGGCAATATCTT+TGG | + | chr5_1:42560175-42560194 | None:intergenic | 25.0% |
! | TAATTAATGGTTCATCTGTA+AGG | - | chr5_1:42560298-42560317 | Msa0731540:intron | 25.0% |
! | ACATTATAAGATCAATAACC+TGG | + | chr5_1:42560892-42560911 | None:intergenic | 25.0% |
! | CCAATATAATGCAATATCAA+AGG | + | chr5_1:42561230-42561249 | None:intergenic | 25.0% |
! | CCTTTGATATTGCATTATAT+TGG | - | chr5_1:42561227-42561246 | Msa0731540:intron | 25.0% |
AACAAAATTTGGATTGAACG+GGG | - | chr5_1:42549625-42549644 | Msa0731540:CDS | 30.0% | |
! | ATTACGAAGCTTGTTCATTA+TGG | + | chr5_1:42549752-42549771 | None:intergenic | 30.0% |
!!! | TTTTTTTTGGGTGCTGTTTT+AGG | - | chr5_1:42549957-42549976 | Msa0731540:intron | 30.0% |
!!! | TTTTTTTGGGTGCTGTTTTA+GGG | - | chr5_1:42549958-42549977 | Msa0731540:intron | 30.0% |
!!! | AGCTATTTTTAGACCTTGTT+TGG | - | chr5_1:42550195-42550214 | Msa0731540:intron | 30.0% |
TACCTCAACTCTTTCTAATA+TGG | + | chr5_1:42550418-42550437 | None:intergenic | 30.0% | |
TTCTATCATACACCATACTT+TGG | + | chr5_1:42550621-42550640 | None:intergenic | 30.0% | |
TGGTGTATGATAGAACATTA+TGG | - | chr5_1:42550626-42550645 | Msa0731540:intron | 30.0% | |
TGTGAAAACAAGCTGAAAAA+AGG | - | chr5_1:42550752-42550771 | Msa0731540:intron | 30.0% | |
!! | TAAGTTTTGTCAGACTGTTT+GGG | + | chr5_1:42550814-42550833 | None:intergenic | 30.0% |
!! | ATAAGTTTTGTCAGACTGTT+TGG | + | chr5_1:42550815-42550834 | None:intergenic | 30.0% |
GCTTATTTAAGCTTATCTAG+TGG | + | chr5_1:42550839-42550858 | None:intergenic | 30.0% | |
TGTATAATAGAAAAACTCGG+TGG | - | chr5_1:42551231-42551250 | Msa0731540:intron | 30.0% | |
! | ATGAGAGTCTATTCTTTTCT+TGG | + | chr5_1:42551358-42551377 | None:intergenic | 30.0% |
AAGAAAAGAATAGACTCTCA+TGG | - | chr5_1:42551357-42551376 | Msa0731540:intron | 30.0% | |
TAAACCACATTACTTACGTT+GGG | + | chr5_1:42551420-42551439 | None:intergenic | 30.0% | |
CACAACTAGAACGATATTAA+GGG | + | chr5_1:42551694-42551713 | None:intergenic | 30.0% | |
CAGCAATCAATACATAAACA+AGG | + | chr5_1:42551924-42551943 | None:intergenic | 30.0% | |
! | TGGATAAACAGCTTTTAACA+AGG | - | chr5_1:42552038-42552057 | Msa0731540:intron | 30.0% |
TTATGGCTAAATACCTAGTT+TGG | - | chr5_1:42552175-42552194 | Msa0731540:intron | 30.0% | |
! | ATGATACAATTTTATGGCGT+TGG | - | chr5_1:42552209-42552228 | Msa0731540:intron | 30.0% |
TTCTTTCATCTATACAACCT+GGG | + | chr5_1:42552480-42552499 | None:intergenic | 30.0% | |
TTTCTTTCATCTATACAACC+TGG | + | chr5_1:42552481-42552500 | None:intergenic | 30.0% | |
GGTTGTATAGATGAAAGAAA+AGG | - | chr5_1:42552481-42552500 | Msa0731540:intron | 30.0% | |
GTTAGTGGAACATACTTATT+TGG | - | chr5_1:42552616-42552635 | Msa0731540:intron | 30.0% | |
AAAAAAAACTTATTTGGGCC+TGG | - | chr5_1:42552655-42552674 | Msa0731540:intron | 30.0% | |
AATATGTGCAAAGTTCAAGT+AGG | + | chr5_1:42553042-42553061 | None:intergenic | 30.0% | |
TTGAAAGCCAAAATGTCATA+AGG | + | chr5_1:42553175-42553194 | None:intergenic | 30.0% | |
GTTGACAAATATATTATGGG+TGG | - | chr5_1:42553228-42553247 | Msa0731540:intron | 30.0% | |
ACAAATATATTATGGGTGGA+AGG | - | chr5_1:42553232-42553251 | Msa0731540:intron | 30.0% | |
TGTTAAAAGCTAGCAATCAT+GGG | - | chr5_1:42553343-42553362 | Msa0731540:intron | 30.0% | |
! | AAATTTGCACAGATCTGTTT+TGG | + | chr5_1:42554176-42554195 | None:intergenic | 30.0% |
! | TTTTGATATCAGTTCCTATC+AGG | - | chr5_1:42553657-42553676 | Msa0731540:intron | 30.0% |
TTTGATATCAGTTCCTATCA+GGG | - | chr5_1:42553658-42553677 | Msa0731540:intron | 30.0% | |
ATCAAGTAGTATGAGATGTT+GGG | + | chr5_1:42554909-42554928 | None:intergenic | 30.0% | |
ATATGCACAATGTGATCAAA+TGG | + | chr5_1:42555098-42555117 | Msa0731560:CDS | 30.0% | |
TAAAGGAAACAAGATTTGTC+GGG | + | chr5_1:42555168-42555187 | Msa0731560:CDS | 30.0% | |
!!! | TATGGTTTTGTCCATTTACA+AGG | - | chr5_1:42555277-42555296 | Msa0731540:intron | 30.0% |
GATATACAAGTTATACAGAC+AGG | + | chr5_1:42555452-42555471 | None:intergenic | 30.0% | |
! | TCATATACTTTCCTTTTGCA+AGG | - | chr5_1:42556035-42556054 | Msa0731540:intron | 30.0% |
ACATGATAAACTGAAACTGT+TGG | + | chr5_1:42556128-42556147 | None:intergenic | 30.0% | |
CTCTTCCAATCTTCTTATAA+TGG | + | chr5_1:42556221-42556240 | None:intergenic | 30.0% | |
! | GGAAGCTTTGATAAGAAATA+TGG | - | chr5_1:42556273-42556292 | Msa0731540:intron | 30.0% |
! | AGCTTTGATAAGAAATATGG+AGG | - | chr5_1:42556276-42556295 | Msa0731540:intron | 30.0% |
TTTGATAAGAAATATGGAGG+AGG | - | chr5_1:42556279-42556298 | Msa0731540:intron | 30.0% | |
GAAGAACAAATAATTACTGG+TGG | - | chr5_1:42556431-42556450 | Msa0731540:intron | 30.0% | |
AATAAAGTATAGATCCAGAG+AGG | - | chr5_1:42556459-42556478 | Msa0731540:intron | 30.0% | |
TATGTCATGGACAATCAATA+AGG | - | chr5_1:42556658-42556677 | Msa0731540:intron | 30.0% | |
! | AAAGTTTTTGATCATCCTTC+AGG | - | chr5_1:42556684-42556703 | Msa0731540:intron | 30.0% |
! | AATACTTATGAAGCGTTTGT+TGG | + | chr5_1:42556743-42556762 | None:intergenic | 30.0% |
CAAACACAAATAAAAGCCAT+CGG | - | chr5_1:42556984-42557003 | Msa0731540:intron | 30.0% | |
! | TACTTTTGTTCTTTGCATGA+CGG | + | chr5_1:42557016-42557035 | None:intergenic | 30.0% |
TGCAAAGAACAAAAGTAAGA+AGG | - | chr5_1:42557019-42557038 | Msa0731540:intron | 30.0% | |
GCAAAGAACAAAAGTAAGAA+GGG | - | chr5_1:42557020-42557039 | Msa0731540:intron | 30.0% | |
!!! | TGACTTGTTTTCTTTTAGGA+GGG | + | chr5_1:42557139-42557158 | None:intergenic | 30.0% |
!!! | TTGACTTGTTTTCTTTTAGG+AGG | + | chr5_1:42557140-42557159 | None:intergenic | 30.0% |
!!! | GGTTTGACTTGTTTTCTTTT+AGG | + | chr5_1:42557143-42557162 | None:intergenic | 30.0% |
ACTAGACTCTTCTCATTATT+GGG | + | chr5_1:42557164-42557183 | None:intergenic | 30.0% | |
TACTAGACTCTTCTCATTAT+TGG | + | chr5_1:42557165-42557184 | None:intergenic | 30.0% | |
CACAGCAAAATAAATTCTCT+AGG | + | chr5_1:42557480-42557499 | None:intergenic | 30.0% | |
!!! | CTAGAGAATTTATTTTGCTG+TGG | - | chr5_1:42557478-42557497 | Msa0731540:intron | 30.0% |
AATAGAGTGAATGGTTAGAA+GGG | - | chr5_1:42557584-42557603 | Msa0731540:intron | 30.0% | |
AGAGTATGAAAGTAGTTCAA+AGG | - | chr5_1:42557653-42557672 | Msa0731540:intron | 30.0% | |
! | TTTACTTTCTTTTTCTCGCA+AGG | - | chr5_1:42557785-42557804 | Msa0731540:intron | 30.0% |
! | TTACTTTCTTTTTCTCGCAA+GGG | - | chr5_1:42557786-42557805 | Msa0731540:intron | 30.0% |
AACAGTAGAGTAAATGACAA+TGG | + | chr5_1:42557825-42557844 | None:intergenic | 30.0% | |
TAGAATTAATGACAAACCCA+GGG | + | chr5_1:42557875-42557894 | None:intergenic | 30.0% | |
ATAGAATTAATGACAAACCC+AGG | + | chr5_1:42557876-42557895 | None:intergenic | 30.0% | |
CAAGAATATTAAGCAGTACA+CGG | + | chr5_1:42558281-42558300 | None:intergenic | 30.0% | |
TTAATATTCTTGTTCTGCAG+AGG | - | chr5_1:42558289-42558308 | Msa0731540:intron | 30.0% | |
!!! | AGTGTATGGCTTTAATTTTG+TGG | - | chr5_1:42558430-42558449 | Msa0731540:intron | 30.0% |
!!! | TATGGCTTTAATTTTGTGGT+CGG | - | chr5_1:42558434-42558453 | Msa0731540:intron | 30.0% |
ATAAGTCAAAATTACATCCG+TGG | - | chr5_1:42558502-42558521 | Msa0731540:intron | 30.0% | |
!! | ATTTTGATCCAGGGATATAT+TGG | - | chr5_1:42558531-42558550 | Msa0731540:intron | 30.0% |
GACATTTACATACAATGACT+TGG | - | chr5_1:42558586-42558605 | Msa0731540:intron | 30.0% | |
CTCTTTCTATATATCCTCTA+TGG | - | chr5_1:42558720-42558739 | Msa0731540:intron | 30.0% | |
CTTTCTATATATCCTCTATG+GGG | - | chr5_1:42558722-42558741 | Msa0731540:intron | 30.0% | |
TTTCTATATATCCTCTATGG+GGG | - | chr5_1:42558723-42558742 | Msa0731540:intron | 30.0% | |
TTACACTTTCAGTAGTTCTT+AGG | - | chr5_1:42558914-42558933 | Msa0731540:intron | 30.0% | |
! | CTTTTGCAATCTTCATTCTT+TGG | + | chr5_1:42558992-42559011 | None:intergenic | 30.0% |
TAAACTCTCACAAATTCAAC+AGG | + | chr5_1:42559151-42559170 | None:intergenic | 30.0% | |
TGTTGAATTTGTGAGAGTTT+AGG | - | chr5_1:42559150-42559169 | Msa0731540:intron | 30.0% | |
!! | GAAAGAGTATCCCTATAAAT+AGG | + | chr5_1:42559262-42559281 | None:intergenic | 30.0% |
GTTAGGATATAGAATAAAGG+AGG | + | chr5_1:42559516-42559535 | None:intergenic | 30.0% | |
CGTGTTAGGATATAGAATAA+AGG | + | chr5_1:42559519-42559538 | None:intergenic | 30.0% | |
TAGCACTACATTTACATTTG+AGG | + | chr5_1:42559557-42559576 | None:intergenic | 30.0% | |
! | CTGTCATATGAAGTGTTAAA+AGG | + | chr5_1:42559772-42559791 | None:intergenic | 30.0% |
AAAACAGTCCATGATATTAG+TGG | + | chr5_1:42559825-42559844 | None:intergenic | 30.0% | |
TAAAAACCCTTAAGTGTGTT+TGG | - | chr5_1:42560352-42560371 | Msa0731540:intron | 30.0% | |
TGATGTTACATATATTGCAC+AGG | + | chr5_1:42560750-42560769 | None:intergenic | 30.0% | |
AAAACACCTTAATTGGAGAA+AGG | + | chr5_1:42561057-42561076 | None:intergenic | 30.0% | |
TTATAATTACCATAGCCCTT+TGG | - | chr5_1:42561096-42561115 | Msa0731540:CDS | 30.0% | |
TATAATTACCATAGCCCTTT+GGG | - | chr5_1:42561097-42561116 | Msa0731540:CDS | 30.0% | |
TCAAATTAATGACTGCAACT+AGG | - | chr5_1:42561141-42561160 | Msa0731540:CDS | 30.0% | |
! | ATATTGGAATTGCATTTTGC+AGG | - | chr5_1:42561243-42561262 | Msa0731540:intron | 30.0% |
!! | TTACTTAGTTGGCTTGAATA+TGG | - | chr5_1:42561372-42561391 | Msa0731540:CDS | 30.0% |
ATTTATCTATCATGGCCAAA+AGG | - | chr5_1:42561491-42561510 | Msa0731540:five_prime_UTR | 30.0% | |
ATTTGCTCTATCAACTGGAA+CGG | + | chr5_1:42549601-42549620 | None:intergenic | 35.0% | |
! | TTGAGATTTGCTCTATCAAC+TGG | + | chr5_1:42549606-42549625 | None:intergenic | 35.0% |
TTCGATTTCGATCTTCATGA+TGG | - | chr5_1:42549723-42549742 | Msa0731540:intron | 35.0% | |
GAAAGAGAAATTACGAAGCT+CGG | + | chr5_1:42549878-42549897 | None:intergenic | 35.0% | |
! | CTTGTTGTAGATACTTCTAG+AGG | - | chr5_1:42550011-42550030 | Msa0731540:intron | 35.0% |
GACCATATTAGAAAGAGTTG+AGG | - | chr5_1:42550413-42550432 | Msa0731540:intron | 35.0% | |
AGCATCTATAGTAGGAAAGA+TGG | - | chr5_1:42550437-42550456 | Msa0731540:intron | 35.0% | |
ATCTATAGTAGGAAAGATGG+TGG | - | chr5_1:42550440-42550459 | Msa0731540:intron | 35.0% | |
! | AAGGAGAGTATATCAGATGA+AGG | - | chr5_1:42550518-42550537 | Msa0731540:intron | 35.0% |
! | TAATGAGTTGGACCAAAGTA+TGG | - | chr5_1:42550606-42550625 | Msa0731540:intron | 35.0% |
! | TTATAAAGGCTTGCTTGGAT+TGG | + | chr5_1:42550861-42550880 | None:intergenic | 35.0% |
! | TTCTCTTATAAAGGCTTGCT+TGG | + | chr5_1:42550866-42550885 | None:intergenic | 35.0% |
TTGGAGAGCTCATGAAAATA+AGG | - | chr5_1:42550943-42550962 | Msa0731540:intron | 35.0% | |
TAGCATAAGCACTTGTCAAA+CGG | + | chr5_1:42551020-42551039 | None:intergenic | 35.0% | |
ATCCAAACAGGTCTATAATG+TGG | - | chr5_1:42551062-42551081 | Msa0731540:intron | 35.0% | |
ATGGCAATGTGATAGAAACA+AGG | - | chr5_1:42551376-42551395 | Msa0731540:intron | 35.0% | |
CTAAACCACATTACTTACGT+TGG | + | chr5_1:42551421-42551440 | None:intergenic | 35.0% | |
GCACAACTAGAACGATATTA+AGG | + | chr5_1:42551695-42551714 | None:intergenic | 35.0% | |
CTAGAAGGAAGAAATTTGCA+GGG | + | chr5_1:42552082-42552101 | None:intergenic | 35.0% | |
AGAGCATGAAATCACCAAAT+CGG | - | chr5_1:42552355-42552374 | Msa0731540:intron | 35.0% | |
AAAAAGCAGATCCTGTCATT+CGG | + | chr5_1:42552517-42552536 | None:intergenic | 35.0% | |
!!! | TTTTTTGTTGTTTCCTGCTG+CGG | - | chr5_1:42552532-42552551 | Msa0731540:intron | 35.0% |
TTATGTTGAAGGAGAAGACT+AGG | - | chr5_1:42552583-42552602 | Msa0731540:intron | 35.0% | |
AGATCTCACTAAAGATCGTT+GGG | + | chr5_1:42552910-42552929 | None:intergenic | 35.0% | |
AACAAGTGATGCATGGAAAT+AGG | + | chr5_1:42553014-42553033 | None:intergenic | 35.0% | |
AAGCATATCGAAAGAAAGGT+TGG | - | chr5_1:42553113-42553132 | Msa0731540:intron | 35.0% | |
AGCATATCGAAAGAAAGGTT+GGG | - | chr5_1:42553114-42553133 | Msa0731540:intron | 35.0% | |
AAATGTCATAAGGACAAACC+TGG | + | chr5_1:42553165-42553184 | None:intergenic | 35.0% | |
! | GGTTTGTCCTTATGACATTT+TGG | - | chr5_1:42553165-42553184 | Msa0731540:intron | 35.0% |
!!! | GATTGCTAGCTTTTAACAGA+GGG | + | chr5_1:42553341-42553360 | Msa0731550:CDS | 35.0% |
!!! | TGATTGCTAGCTTTTAACAG+AGG | + | chr5_1:42553342-42553361 | Msa0731550:CDS | 35.0% |
CTGTTAAAAGCTAGCAATCA+TGG | - | chr5_1:42553342-42553361 | Msa0731540:intron | 35.0% | |
GTTAAAAGCTAGCAATCATG+GGG | - | chr5_1:42553344-42553363 | Msa0731540:intron | 35.0% | |
TTAAAAGCTAGCAATCATGG+GGG | - | chr5_1:42553345-42553364 | Msa0731540:intron | 35.0% | |
TGTTAGTAATAGGACTCCTA+AGG | - | chr5_1:42553368-42553387 | Msa0731540:intron | 35.0% | |
GTTAGTAATAGGACTCCTAA+GGG | - | chr5_1:42553369-42553388 | Msa0731540:intron | 35.0% | |
TATCTATAACTTCTGCCCTT+AGG | + | chr5_1:42553387-42553406 | Msa0731550:CDS | 35.0% | |
GCAGAAGTTATAGATACTAG+TGG | - | chr5_1:42553391-42553410 | Msa0731540:intron | 35.0% | |
GACTTCTATGTAACAGCTAT+AGG | - | chr5_1:42553475-42553494 | Msa0731540:intron | 35.0% | |
TAAGATGCAGAGGAAAAGAA+AGG | - | chr5_1:42553513-42553532 | Msa0731540:intron | 35.0% | |
! | ATTGGGATAAAGGATTGGTA+GGG | - | chr5_1:42553545-42553564 | Msa0731540:intron | 35.0% |
TGATATCAGTTCCTATCAAC+TGG | - | chr5_1:42553660-42553679 | Msa0731540:intron | 35.0% | |
AGGGAAAGAAATTCACAGTA+GGG | - | chr5_1:42553703-42553722 | Msa0731540:intron | 35.0% | |
!! | TGAGAAACATTTTGATGTCG+TGG | - | chr5_1:42553787-42553806 | Msa0731540:intron | 35.0% |
!! | GAGAAACATTTTGATGTCGT+GGG | - | chr5_1:42553788-42553807 | Msa0731540:intron | 35.0% |
TAGAGACCTTCTACCTATAT+CGG | - | chr5_1:42553958-42553977 | Msa0731540:intron | 35.0% | |
GATCAGTTTCTTCTGATTGA+AGG | + | chr5_1:42554039-42554058 | None:intergenic | 35.0% | |
CAATCAGAAGAAACTGATCA+AGG | - | chr5_1:42554040-42554059 | Msa0731540:intron | 35.0% | |
TTCCACAATGATGACATTCA+TGG | + | chr5_1:42554140-42554159 | None:intergenic | 35.0% | |
ACAGATCTGTGCAAATTTCT+TGG | - | chr5_1:42554178-42554197 | Msa0731540:intron | 35.0% | |
! | GACAGACTCTTTTATGAACA+TGG | - | chr5_1:42554205-42554224 | Msa0731540:intron | 35.0% |
CCTAGAAAAATTATCGGAGA+GGG | - | chr5_1:42554262-42554281 | Msa0731540:intron | 35.0% | |
AAAAATTATCGGAGAGGGAT+GGG | - | chr5_1:42554267-42554286 | Msa0731540:intron | 35.0% | |
! | TGTCACTCTACTTCAAGTTA+TGG | - | chr5_1:42554476-42554495 | Msa0731540:intron | 35.0% |
! | GTCACTCTACTTCAAGTTAT+GGG | - | chr5_1:42554477-42554496 | Msa0731540:intron | 35.0% |
TTATGTTATCCTTCACCTTG+AGG | - | chr5_1:42554514-42554533 | Msa0731540:intron | 35.0% | |
TGTTAGTAATAGGACTCCTA+AGG | - | chr5_1:42553368-42553387 | Msa0731540:intron | 35.0% | |
GTTAGTAATAGGACTCCTAA+GGG | - | chr5_1:42553369-42553388 | Msa0731540:intron | 35.0% | |
TATCTATAACTTCTGCCCTT+AGG | + | chr5_1:42553387-42553406 | Msa0731550:CDS | 35.0% | |
GCAGAAGTTATAGATACTAG+TGG | - | chr5_1:42553391-42553410 | Msa0731540:intron | 35.0% | |
GACTTCTATGTAACAGCTAT+AGG | - | chr5_1:42553475-42553494 | Msa0731540:intron | 35.0% | |
TAAGATGCAGAGGAAAAGAA+AGG | - | chr5_1:42553513-42553532 | Msa0731540:intron | 35.0% | |
! | ATTGGGATAAAGGATTGGTA+GGG | - | chr5_1:42553545-42553564 | Msa0731540:intron | 35.0% |
TTGATATCAGTTCCTATCAG+GGG | - | chr5_1:42554856-42554875 | Msa0731540:intron | 35.0% | |
CATCAAGTAGTATGAGATGT+TGG | + | chr5_1:42554910-42554929 | None:intergenic | 35.0% | |
ACATCTCATACTACTTGATG+TGG | - | chr5_1:42554910-42554929 | Msa0731540:intron | 35.0% | |
CATCTCATACTACTTGATGT+GGG | - | chr5_1:42554911-42554930 | Msa0731540:intron | 35.0% | |
ATCACTTAGTGCAAAAGAGA+AGG | - | chr5_1:42555513-42555532 | Msa0731540:CDS | 35.0% | |
TCACTTAGTGCAAAAGAGAA+GGG | - | chr5_1:42555514-42555533 | Msa0731540:CDS | 35.0% | |
AGGGTTCTTAGAAAGAATCA+AGG | - | chr5_1:42555533-42555552 | Msa0731540:CDS | 35.0% | |
GAAAGAATCAAGGAAGAAGA+AGG | - | chr5_1:42555543-42555562 | Msa0731540:CDS | 35.0% | |
! | ATGCAATGTGTATGGCTTTT+TGG | - | chr5_1:42555572-42555591 | Msa0731540:CDS | 35.0% |
!! | TGGCTTTTTGGAAGTAAACA+AGG | - | chr5_1:42555584-42555603 | Msa0731540:CDS | 35.0% |
!! | CTTTTTGGAAGTAAACAAGG+TGG | - | chr5_1:42555587-42555606 | Msa0731540:CDS | 35.0% |
TAAAGAAGTGAGCAGTTAGT+AGG | - | chr5_1:42555824-42555843 | Msa0731540:intron | 35.0% | |
AAAGAAGTGAGCAGTTAGTA+GGG | - | chr5_1:42555825-42555844 | Msa0731540:intron | 35.0% | |
AAATGAACTAGTGACCCTTT+GGG | - | chr5_1:42555865-42555884 | Msa0731540:intron | 35.0% | |
AGGTGATTATAAAGGATGTG+AGG | - | chr5_1:42555912-42555931 | Msa0731540:intron | 35.0% | |
GGTGATTATAAAGGATGTGA+GGG | - | chr5_1:42555913-42555932 | Msa0731540:intron | 35.0% | |
GTGATTATAAAGGATGTGAG+GGG | - | chr5_1:42555914-42555933 | Msa0731540:intron | 35.0% | |
TGATTATAAAGGATGTGAGG+GGG | - | chr5_1:42555915-42555934 | Msa0731540:intron | 35.0% | |
TAATAGTACCAGTAACTCCA+AGG | + | chr5_1:42556187-42556206 | None:intergenic | 35.0% | |
TGGAGCCATTATAAGAAGAT+TGG | - | chr5_1:42556213-42556232 | Msa0731540:intron | 35.0% | |
TAAGAAGATTGGAAGAGATG+AGG | - | chr5_1:42556224-42556243 | Msa0731540:intron | 35.0% | |
AAGAAGATTGGAAGAGATGA+GGG | - | chr5_1:42556225-42556244 | Msa0731540:intron | 35.0% | |
AAAACGATACTGCAGAATCA+AGG | - | chr5_1:42556327-42556346 | Msa0731540:intron | 35.0% | |
!! | TTTTGATCATCCTTCAGGTT+TGG | - | chr5_1:42556689-42556708 | Msa0731540:intron | 35.0% |
ATTGAAACTGCAACTTTGTC+TGG | + | chr5_1:42556860-42556879 | None:intergenic | 35.0% | |
!! | ACTTGTTTTCTTTTAGGAGG+GGG | + | chr5_1:42557137-42557156 | None:intergenic | 35.0% |
!! | GACTTGTTTTCTTTTAGGAG+GGG | + | chr5_1:42557138-42557157 | None:intergenic | 35.0% |
!! | ACTCAAGTCTTTAAGATACG+TGG | - | chr5_1:42557184-42557203 | Msa0731540:intron | 35.0% |
! | AGTTCGAAAATGTTTTACCC+AGG | - | chr5_1:42557211-42557230 | Msa0731540:intron | 35.0% |
! | GTTCGAAAATGTTTTACCCA+GGG | - | chr5_1:42557212-42557231 | Msa0731540:intron | 35.0% |
! | TTCGAAAATGTTTTACCCAG+GGG | - | chr5_1:42557213-42557232 | Msa0731540:intron | 35.0% |
AAAACAAGGTCTGGCATTAA+TGG | - | chr5_1:42557246-42557265 | Msa0731540:intron | 35.0% | |
AAACAAGGTCTGGCATTAAT+GGG | - | chr5_1:42557247-42557266 | Msa0731540:intron | 35.0% | |
ATTTCTGTTTCATGCTTGCT+TGG | - | chr5_1:42557430-42557449 | Msa0731540:intron | 35.0% | |
TGTGGTAAGAATAGAGTGAA+TGG | - | chr5_1:42557575-42557594 | Msa0731540:intron | 35.0% | |
GAATAGAGTGAATGGTTAGA+AGG | - | chr5_1:42557583-42557602 | Msa0731540:intron | 35.0% | |
AAAGTAGTTCAAAGGAAGTG+AGG | - | chr5_1:42557661-42557680 | Msa0731540:intron | 35.0% | |
! | TACTTTCTTTTTCTCGCAAG+GGG | - | chr5_1:42557787-42557806 | Msa0731540:intron | 35.0% |
AGAATTAATGACAAACCCAG+GGG | + | chr5_1:42557874-42557893 | None:intergenic | 35.0% | |
TCTTGATTATCAGTGTGCAT+TGG | - | chr5_1:42558196-42558215 | Msa0731540:intron | 35.0% | |
AAATACTGATACATCCCACT+GGG | + | chr5_1:42558234-42558253 | None:intergenic | 35.0% | |
AAAATACTGATACATCCCAC+TGG | + | chr5_1:42558235-42558254 | None:intergenic | 35.0% | |
!! | CTTCTATTGGTGTTAGTGTA+TGG | - | chr5_1:42558416-42558435 | Msa0731540:intron | 35.0% |
TGGATCAAAATTCATAGCCA+CGG | + | chr5_1:42558522-42558541 | None:intergenic | 35.0% | |
!! | TGGCTATGAATTTTGATCCA+GGG | - | chr5_1:42558522-42558541 | Msa0731540:intron | 35.0% |
AAGTATGACCAATATATCCC+TGG | + | chr5_1:42558542-42558561 | None:intergenic | 35.0% | |
GCTGTTGTGTATAATTGACA+AGG | + | chr5_1:42558780-42558799 | None:intergenic | 35.0% | |
TTAGGATCCTTACTTTGTGT+AGG | - | chr5_1:42558932-42558951 | Msa0731540:intron | 35.0% | |
ACATTCTCCTACACAAAGTA+AGG | + | chr5_1:42558942-42558961 | None:intergenic | 35.0% | |
AAATTCAACAGGTTTCTGAC+TGG | + | chr5_1:42559140-42559159 | None:intergenic | 35.0% | |
TTGTGAGAGTTTAGGTAAGA+AGG | - | chr5_1:42559158-42559177 | Msa0731540:intron | 35.0% | |
! | CTTTTAAATTAGCCCTCGAT+TGG | + | chr5_1:42559433-42559452 | None:intergenic | 35.0% |
GCAATTGAAATCGTGTAAGA+TGG | - | chr5_1:42559639-42559658 | Msa0731540:intron | 35.0% | |
CACTTCATATGACAGCTTTA+AGG | - | chr5_1:42559777-42559796 | Msa0731540:CDS | 35.0% | |
AAGCAAATAAACCAGACTGA+AGG | + | chr5_1:42559872-42559891 | None:intergenic | 35.0% | |
CAATTTCTCACATGTAGGAT+TGG | - | chr5_1:42559914-42559933 | Msa0731540:CDS | 35.0% | |
CACAATCTACTATCTACAGA+CGG | + | chr5_1:42560704-42560723 | None:intergenic | 35.0% | |
! | ATTGTGTGTGCCTTTTGAAT+TGG | - | chr5_1:42560718-42560737 | Msa0731540:intron | 35.0% |
! | ACCTTGTCAAATTTTACCAC+TGG | - | chr5_1:42560798-42560817 | Msa0731540:intron | 35.0% |
AATCTGAACAACAACCCAAA+GGG | + | chr5_1:42561114-42561133 | None:intergenic | 35.0% | |
AAATCTGAACAACAACCCAA+AGG | + | chr5_1:42561115-42561134 | None:intergenic | 35.0% | |
CATTTGTATACCTCCAACTA+TGG | + | chr5_1:42561323-42561342 | None:intergenic | 35.0% | |
! | CATAGTTGGAGGTATACAAA+TGG | - | chr5_1:42561321-42561340 | Msa0731540:CDS | 35.0% |
AGACAGACTGAAGACAAATA+GGG | + | chr5_1:42561353-42561372 | None:intergenic | 35.0% | |
AAGACAGACTGAAGACAAAT+AGG | + | chr5_1:42561354-42561373 | None:intergenic | 35.0% | |
TTCAGTCTGTCTTACTTAGT+TGG | - | chr5_1:42561361-42561380 | Msa0731540:CDS | 35.0% | |
! | ACAGGAATTTTCACTGTTTC+TGG | - | chr5_1:42561456-42561475 | Msa0731540:five_prime_UTR | 35.0% |
!! | TCTTCTTCTTGATAGCCTTT+TGG | + | chr5_1:42561509-42561528 | None:intergenic | 35.0% |
AAAGGCTATCAAGAAGAAGA+TGG | - | chr5_1:42561509-42561528 | Msa0731540:five_prime_UTR | 35.0% | |
ATCAAGAAGAAGATGGAACT+CGG | - | chr5_1:42561516-42561535 | Msa0731540:five_prime_UTR | 35.0% | |
TTTGCTCTATCAACTGGAAC+GGG | + | chr5_1:42549600-42549619 | None:intergenic | 40.0% | |
TTCTATAGTCGCACTCTTTC+TGG | - | chr5_1:42549802-42549821 | Msa0731540:intron | 40.0% | |
! | GAAAAGCAAGAGCATGAGAA+TGG | + | chr5_1:42549851-42549870 | None:intergenic | 40.0% |
ATAGGCTATAAGCCTAGATC+AGG | - | chr5_1:42550347-42550366 | Msa0731540:intron | 40.0% | |
GTTGAGGTAGCATCTATAGT+AGG | - | chr5_1:42550429-42550448 | Msa0731540:intron | 40.0% | |
CAAAGTCATGTCAGCTACAT+GGG | + | chr5_1:42550662-42550681 | None:intergenic | 40.0% | |
ACAAAGTCATGTCAGCTACA+TGG | + | chr5_1:42550663-42550682 | None:intergenic | 40.0% | |
ATGTAGCTGACATGACTTTG+TGG | - | chr5_1:42550662-42550681 | Msa0731540:intron | 40.0% | |
TGTAGCTGACATGACTTTGT+GGG | - | chr5_1:42550663-42550682 | Msa0731540:intron | 40.0% | |
TGACATGACTTTGTGGGAAA+AGG | - | chr5_1:42550669-42550688 | Msa0731540:intron | 40.0% | |
!! | GCTGTTTTCATAAGCTAGCT+TGG | - | chr5_1:42550924-42550943 | Msa0731540:intron | 40.0% |
CACCACATTATAGACCTGTT+TGG | + | chr5_1:42551067-42551086 | None:intergenic | 40.0% | |
TATACTTAGTCTCGATGCCA+TGG | - | chr5_1:42551176-42551195 | Msa0731540:intron | 40.0% | |
GTGATAGAAACAAGGCAAGA+TGG | - | chr5_1:42551384-42551403 | Msa0731540:intron | 40.0% | |
GAAACAAGGCAAGATGGAAT+CGG | - | chr5_1:42551390-42551409 | Msa0731540:intron | 40.0% | |
TTCTCCCAACGTAAGTAATG+TGG | - | chr5_1:42551413-42551432 | Msa0731540:intron | 40.0% | |
AGGGAGATACGAAGAAATTC+TGG | + | chr5_1:42551723-42551742 | None:intergenic | 40.0% | |
CATGAATCAAGTGTGAGCAA+GGG | + | chr5_1:42551742-42551761 | None:intergenic | 40.0% | |
GAAAAACCCTTGCAAAGACA+TGG | - | chr5_1:42551800-42551819 | Msa0731540:intron | 40.0% | |
GAGCACAATGAGACTTATTG+CGG | - | chr5_1:42551833-42551852 | Msa0731540:intron | 40.0% | |
ACTTATTGCGGATCCTGTTA+TGG | - | chr5_1:42551845-42551864 | Msa0731540:intron | 40.0% | |
GCTAGAAGGAAGAAATTTGC+AGG | + | chr5_1:42552083-42552102 | None:intergenic | 40.0% | |
GGTTCAAAGTTCGCAGAATA+CGG | - | chr5_1:42552309-42552328 | Msa0731540:intron | 40.0% | |
!!! | TTTTTGTTGTTTCCTGCTGC+GGG | - | chr5_1:42552533-42552552 | Msa0731540:intron | 40.0% |
CTAGGTCTAGGTTAAGTTAG+TGG | - | chr5_1:42552601-42552620 | Msa0731540:intron | 40.0% | |
GTAGATCGTACGATGTAACA+AGG | + | chr5_1:42552880-42552899 | None:intergenic | 40.0% | |
GATCTCACTAAAGATCGTTG+GGG | + | chr5_1:42552909-42552928 | None:intergenic | 40.0% | |
GAGATCTCACTAAAGATCGT+TGG | + | chr5_1:42552911-42552930 | None:intergenic | 40.0% | |
!! | GATCTCGATTTTGACAACCA+TGG | - | chr5_1:42552925-42552944 | Msa0731540:intron | 40.0% |
GGAATGTTGTAATTCCTGTG+AGG | - | chr5_1:42553081-42553100 | Msa0731540:intron | 40.0% | |
CGTGAAGCATATCGAAAGAA+AGG | - | chr5_1:42553109-42553128 | Msa0731540:intron | 40.0% | |
AAACCTGGTCAATTGAATCC+GGG | + | chr5_1:42553150-42553169 | None:intergenic | 40.0% | |
CAAACCTGGTCAATTGAATC+CGG | + | chr5_1:42553151-42553170 | None:intergenic | 40.0% | |
!! | ATCATGGGGGTGTTAGTAAT+AGG | - | chr5_1:42553358-42553377 | Msa0731540:intron | 40.0% |
!! | AGAGGAAAAGAAAGGCATTC+AGG | - | chr5_1:42553521-42553540 | Msa0731540:intron | 40.0% |
!! | GAGGAAAAGAAAGGCATTCA+GGG | - | chr5_1:42553522-42553541 | Msa0731540:intron | 40.0% |
!! | AAAGAAAGGCATTCAGGGAT+TGG | - | chr5_1:42553527-42553546 | Msa0731540:intron | 40.0% |
!! | AAGAAAGGCATTCAGGGATT+GGG | - | chr5_1:42553528-42553547 | Msa0731540:intron | 40.0% |
! | GATTGGGATAAAGGATTGGT+AGG | - | chr5_1:42553544-42553563 | Msa0731540:intron | 40.0% |
ACCAAGACTCTCGAATTTCT+TGG | - | chr5_1:42553603-42553622 | Msa0731540:intron | 40.0% | |
CCAAGACTCTCGAATTTCTT+GGG | - | chr5_1:42553604-42553623 | Msa0731540:intron | 40.0% | |
CTACTGTGAATTTCTTTCCC+TGG | + | chr5_1:42553704-42553723 | None:intergenic | 40.0% | |
CAGGGAAAGAAATTCACAGT+AGG | - | chr5_1:42553702-42553721 | Msa0731540:intron | 40.0% | |
GGGAAAGAAATTCACAGTAG+GGG | - | chr5_1:42553704-42553723 | Msa0731540:intron | 40.0% | |
GGAAAGAAATTCACAGTAGG+GGG | - | chr5_1:42553705-42553724 | Msa0731540:intron | 40.0% | |
GAAAGAAATTCACAGTAGGG+GGG | - | chr5_1:42553706-42553725 | Msa0731540:intron | 40.0% | |
ATGGACATGCCACAATTTGA+CGG | - | chr5_1:42553731-42553750 | Msa0731540:intron | 40.0% | |
CGTTTCACGTTGCATTCATT+TGG | - | chr5_1:42553918-42553937 | Msa0731540:intron | 40.0% | |
CTTCATCCGATATAGGTAGA+AGG | + | chr5_1:42553967-42553986 | None:intergenic | 40.0% | |
ACCTATATCGGATGAAGAAG+AGG | - | chr5_1:42553970-42553989 | Msa0731540:intron | 40.0% | |
TCCTCTTCTTCATCCGATAT+AGG | + | chr5_1:42553974-42553993 | None:intergenic | 40.0% | |
TGAAGAAGAGGAATCTGGAT+TGG | - | chr5_1:42553982-42554001 | Msa0731540:intron | 40.0% | |
! | AAGAGGAATCTGGATTGGAA+TGG | - | chr5_1:42553987-42554006 | Msa0731540:intron | 40.0% |
! | AGAGGAATCTGGATTGGAAT+GGG | - | chr5_1:42553988-42554007 | Msa0731540:intron | 40.0% |
GGTAGAGAATGCAGAAGAAA+TGG | - | chr5_1:42554099-42554118 | Msa0731540:intron | 40.0% | |
CACAATGATGACATTCATGG+AGG | + | chr5_1:42554137-42554156 | None:intergenic | 40.0% | |
CTCCATGAATGTCATCATTG+TGG | - | chr5_1:42554135-42554154 | Msa0731540:intron | 40.0% | |
GCCTAGAAAAATTATCGGAG+AGG | - | chr5_1:42554261-42554280 | Msa0731540:intron | 40.0% | |
! | CCCTCTCCGATAATTTTTCT+AGG | + | chr5_1:42554265-42554284 | None:intergenic | 40.0% |
GAAAAATTATCGGAGAGGGA+TGG | - | chr5_1:42554266-42554285 | Msa0731540:intron | 40.0% | |
!! | CTCTTTTGGGGAGGAATTTT+CGG | + | chr5_1:42554412-42554431 | None:intergenic | 40.0% |
! | TGCATCAGACACTCTCTTTT+GGG | + | chr5_1:42554425-42554444 | None:intergenic | 40.0% |
! | ATGCATCAGACACTCTCTTT+TGG | + | chr5_1:42554426-42554445 | None:intergenic | 40.0% |
GATAACATAACTGTCCACCA+GGG | + | chr5_1:42554504-42554523 | None:intergenic | 40.0% | |
!! | GGGGGAGTATTGTTAGTAAT+AGG | - | chr5_1:42554555-42554574 | Msa0731540:intron | 40.0% |
!! | AGAGGAAAAGAAAGGCATTC+AGG | - | chr5_1:42553521-42553540 | Msa0731540:intron | 40.0% |
!! | GAGGAAAAGAAAGGCATTCA+GGG | - | chr5_1:42553522-42553541 | Msa0731540:intron | 40.0% |
!! | AAAGAAAGGCATTCAGGGAT+TGG | - | chr5_1:42553527-42553546 | Msa0731540:intron | 40.0% |
!! | AAGAAAGGCATTCAGGGATT+GGG | - | chr5_1:42553528-42553547 | Msa0731540:intron | 40.0% |
! | GATTGGGATAAAGGATTGGT+AGG | - | chr5_1:42553544-42553563 | Msa0731540:intron | 40.0% |
ACCAAGACTCTCGAATTTCT+TGG | - | chr5_1:42553603-42553622 | Msa0731540:intron | 40.0% | |
CCAAGACTCTCGAATTTCTT+GGG | - | chr5_1:42553604-42553623 | Msa0731540:intron | 40.0% | |
TGATATCAGTTCCTATCAGG+GGG | - | chr5_1:42554857-42554876 | Msa0731540:intron | 40.0% | |
AAGTAGTATGAGATGTTGGG+TGG | + | chr5_1:42554906-42554925 | None:intergenic | 40.0% | |
ATACTACTTGATGTGGGACT+TGG | - | chr5_1:42554917-42554936 | Msa0731540:intron | 40.0% | |
AGGAATCTGAACTGCTGATA+GGG | + | chr5_1:42554963-42554982 | None:intergenic | 40.0% | |
AAGGAATCTGAACTGCTGAT+AGG | + | chr5_1:42554964-42554983 | None:intergenic | 40.0% | |
ATCAAGGAAGAAGAAGGTGA+AGG | - | chr5_1:42555549-42555568 | Msa0731540:CDS | 40.0% | |
! | GGAATTTCCATTTTGCTCCT+GGG | - | chr5_1:42555613-42555632 | Msa0731540:intron | 40.0% |
CAAATGAACTAGTGACCCTT+TGG | - | chr5_1:42555864-42555883 | Msa0731540:intron | 40.0% | |
AATGAACTAGTGACCCTTTG+GGG | - | chr5_1:42555866-42555885 | Msa0731540:intron | 40.0% | |
AGGAGGTGAGGTGATTATAA+AGG | - | chr5_1:42555904-42555923 | Msa0731540:intron | 40.0% | |
!! | TATGATGGATGAGTGTGAAG+AGG | - | chr5_1:42555948-42555967 | Msa0731540:intron | 40.0% |
!! | ATGATGGATGAGTGTGAAGA+GGG | - | chr5_1:42555949-42555968 | Msa0731540:intron | 40.0% |
! | ACAGACAGAGATTTAGAGCA+AGG | - | chr5_1:42556352-42556371 | Msa0731540:intron | 40.0% |
! | CAGACAGAGATTTAGAGCAA+GGG | - | chr5_1:42556353-42556372 | Msa0731540:intron | 40.0% |
!! | AACAATTTTGGTGGCAGCAA+AGG | + | chr5_1:42556519-42556538 | None:intergenic | 40.0% |
TTTGCTGCCACCAAAATTGT+TGG | - | chr5_1:42556518-42556537 | Msa0731540:intron | 40.0% | |
! | CTGGTATCCAACAATTTTGG+TGG | + | chr5_1:42556528-42556547 | None:intergenic | 40.0% |
! | GAGCTGGTATCCAACAATTT+TGG | + | chr5_1:42556531-42556550 | None:intergenic | 40.0% |
AACCAAAATCAGATCCAAGC+TGG | - | chr5_1:42556587-42556606 | Msa0731540:intron | 40.0% | |
TCTGACGATGAAGGTTCTTA+TGG | - | chr5_1:42556633-42556652 | Msa0731540:intron | 40.0% | |
CTGACGATGAAGGTTCTTAT+GGG | - | chr5_1:42556634-42556653 | Msa0731540:intron | 40.0% | |
GGTTCTTATGGGATATGTCA+TGG | - | chr5_1:42556645-42556664 | Msa0731540:intron | 40.0% | |
!! | ATTTTAGGTCACTGAGAGAG+TGG | - | chr5_1:42556765-42556784 | Msa0731540:intron | 40.0% |
!! | TTTTAGGTCACTGAGAGAGT+GGG | - | chr5_1:42556766-42556785 | Msa0731540:intron | 40.0% |
!!! | TGTTTTGACTGGTACTTCAC+AGG | + | chr5_1:42556822-42556841 | None:intergenic | 40.0% |
!!! | TTTACTGAGGGTGTTTTGAC+TGG | + | chr5_1:42556833-42556852 | None:intergenic | 40.0% |
! | AACTATAGAGTACTCGAGCT+AGG | + | chr5_1:42556899-42556918 | None:intergenic | 40.0% |
TCGAGTACTCTATAGTTGTG+AGG | - | chr5_1:42556902-42556921 | Msa0731540:intron | 40.0% | |
ACTCTATAGTTGTGAGGAAC+AGG | - | chr5_1:42556908-42556927 | Msa0731540:intron | 40.0% | |
AAGTAAGAAGGGTAGCAGAT+TGG | - | chr5_1:42557031-42557050 | Msa0731540:intron | 40.0% | |
AGTAAGAAGGGTAGCAGATT+GGG | - | chr5_1:42557032-42557051 | Msa0731540:intron | 40.0% | |
ACTAGGGTAAACAGAGAAAG+AGG | - | chr5_1:42557069-42557088 | Msa0731540:intron | 40.0% | |
AGCACTCAAAAAACAAGGTC+TGG | - | chr5_1:42557237-42557256 | Msa0731540:intron | 40.0% | |
! | TAATGGGTCAAGCTAAAGTG+AGG | - | chr5_1:42557263-42557282 | Msa0731540:intron | 40.0% |
GTTGAATAAGATCCAAGACC+AGG | - | chr5_1:42557312-42557331 | Msa0731540:intron | 40.0% | |
TTATTATTGCAGCTGCAAGG+AGG | - | chr5_1:42557351-42557370 | Msa0731540:intron | 40.0% | |
! | AGGGTTGAATGCACTGTTTT+GGG | + | chr5_1:42557402-42557421 | None:intergenic | 40.0% |
! | AAGGGTTGAATGCACTGTTT+TGG | + | chr5_1:42557403-42557422 | None:intergenic | 40.0% |
AAAACAGTGCATTCAACCCT+TGG | - | chr5_1:42557402-42557421 | Msa0731540:intron | 40.0% | |
AAACAGTGCATTCAACCCTT+GGG | - | chr5_1:42557403-42557422 | Msa0731540:intron | 40.0% | |
GAAACAGAAATCTTCCCCAA+GGG | + | chr5_1:42557421-42557440 | None:intergenic | 40.0% | |
TGAAACAGAAATCTTCCCCA+AGG | + | chr5_1:42557422-42557441 | None:intergenic | 40.0% | |
! | GTCATCATCCTTCAGGTTAT+GGG | - | chr5_1:42557452-42557471 | Msa0731540:intron | 40.0% |
!! | TCCTTTCAAGTTTCACCTTG+AGG | - | chr5_1:42557506-42557525 | Msa0731540:intron | 40.0% |
TCCTCAAGGTGAAACTTGAA+AGG | + | chr5_1:42557510-42557529 | None:intergenic | 40.0% | |
!! | TAGTTGGTGGCGATATTGAT+AGG | - | chr5_1:42557541-42557560 | Msa0731540:intron | 40.0% |
TGATAGGCACATCAGAAATG+TGG | - | chr5_1:42557557-42557576 | Msa0731540:intron | 40.0% | |
! | AAAAAGTACAGGTGGCTCTT+TGG | - | chr5_1:42557624-42557643 | Msa0731540:intron | 40.0% |
! | AAAAGTACAGGTGGCTCTTT+GGG | - | chr5_1:42557625-42557644 | Msa0731540:intron | 40.0% |
TAGTTCAAAGGAAGTGAGGT+GGG | - | chr5_1:42557665-42557684 | Msa0731540:intron | 40.0% | |
TGTATAGAGGATTAATCCCC+TGG | - | chr5_1:42557855-42557874 | Msa0731540:intron | 40.0% | |
GTATAGAGGATTAATCCCCT+GGG | - | chr5_1:42557856-42557875 | Msa0731540:intron | 40.0% | |
CAAAGGCTATTCTGTTGATG+TGG | + | chr5_1:42558054-42558073 | None:intergenic | 40.0% | |
CACATCAACAGAATAGCCTT+TGG | - | chr5_1:42558052-42558071 | Msa0731540:intron | 40.0% | |
TGAGAACATAAAGAGCTCAC+CGG | + | chr5_1:42558111-42558130 | None:intergenic | 40.0% | |
GTTACAAATGCAACTCCCAA+GGG | + | chr5_1:42558461-42558480 | None:intergenic | 40.0% | |
TGTTACAAATGCAACTCCCA+AGG | + | chr5_1:42558462-42558481 | None:intergenic | 40.0% | |
!! | GTGGCTATGAATTTTGATCC+AGG | - | chr5_1:42558521-42558540 | Msa0731540:intron | 40.0% |
TTGCAGTGAAATGAGACAGT+TGG | + | chr5_1:42558659-42558678 | None:intergenic | 40.0% | |
CTGTCTCATTTCACTGCAAT+TGG | - | chr5_1:42558660-42558679 | Msa0731540:intron | 40.0% | |
!! | TTTTATAGCCTTAACGTCCC+TGG | - | chr5_1:42558803-42558822 | Msa0731540:intron | 40.0% |
AAGTGTAACTCGTTGTCACA+CGG | + | chr5_1:42558902-42558921 | None:intergenic | 40.0% | |
TGGTTAATCCAGTGTGAAAG+GGG | + | chr5_1:42559120-42559139 | None:intergenic | 40.0% | |
CTGGTTAATCCAGTGTGAAA+GGG | + | chr5_1:42559121-42559140 | None:intergenic | 40.0% | |
ACTGGTTAATCCAGTGTGAA+AGG | + | chr5_1:42559122-42559141 | None:intergenic | 40.0% | |
GTTTAGGTAAGAAGGAAGAG+AGG | - | chr5_1:42559166-42559185 | Msa0731540:intron | 40.0% | |
AATAAACCAGACTGAAGGAG+TGG | + | chr5_1:42559867-42559886 | None:intergenic | 40.0% | |
! | TCTGTAAGGCAAGTGTCTTT+TGG | - | chr5_1:42560312-42560331 | Msa0731540:intron | 40.0% |
! | CTGTAAGGCAAGTGTCTTTT+GGG | - | chr5_1:42560313-42560332 | Msa0731540:intron | 40.0% |
AACCCTTAAGTGTGTTTGGA+TGG | - | chr5_1:42560356-42560375 | Msa0731540:intron | 40.0% | |
CTCCATCCAAACACACTTAA+GGG | + | chr5_1:42560361-42560380 | None:intergenic | 40.0% | |
CTTAAGTGTGTTTGGATGGA+GGG | - | chr5_1:42560360-42560379 | Msa0731540:intron | 40.0% | |
TTTGGATTGAGGGTTTAGGA+GGG | + | chr5_1:42560572-42560591 | None:intergenic | 40.0% | |
TGTGTTTGGATTGAGGGTTT+AGG | + | chr5_1:42560576-42560595 | None:intergenic | 40.0% | |
! | TAAGGGTGTGTTTGGATTGA+GGG | + | chr5_1:42560582-42560601 | None:intergenic | 40.0% |
!! | CAGGAAAGTGCCAATTCAAA+AGG | + | chr5_1:42560731-42560750 | None:intergenic | 40.0% |
GCCAGTGGTAAAATTTGACA+AGG | + | chr5_1:42560802-42560821 | None:intergenic | 40.0% | |
GAAAAACAACATGAAGCCAG+TGG | + | chr5_1:42560817-42560836 | None:intergenic | 40.0% | |
!!! | CTGGCTTCATGTTGTTTTTC+AGG | - | chr5_1:42560817-42560836 | Msa0731540:intron | 40.0% |
!!! | GCTTCATGTTGTTTTTCAGG+TGG | - | chr5_1:42560820-42560839 | Msa0731540:intron | 40.0% |
! | GATCAATAACCTGGTTTGAC+TGG | + | chr5_1:42560883-42560902 | None:intergenic | 40.0% |
TCTCTGTGACAGAACACTTT+AGG | - | chr5_1:42560978-42560997 | Msa0731540:intron | 40.0% | |
! | TGTGACAGAACACTTTAGGA+CGG | - | chr5_1:42560982-42561001 | Msa0731540:intron | 40.0% |
CGTAGAAGAAAAAAACCCCA+GGG | + | chr5_1:42561033-42561052 | None:intergenic | 40.0% | |
TCGTAGAAGAAAAAAACCCC+AGG | + | chr5_1:42561034-42561053 | None:intergenic | 40.0% | |
CTACGACCTTTCTCCAATTA+AGG | - | chr5_1:42561048-42561067 | Msa0731540:intron | 40.0% | |
CCTGTATGCAAAAGCAAGAA+TGG | + | chr5_1:42561441-42561460 | None:intergenic | 40.0% | |
!! | CCATTCTTGCTTTTGCATAC+AGG | - | chr5_1:42561438-42561457 | Msa0731540:five_prime_UTR | 40.0% |
! | AAAGTACTCCAACAACAGCA+AGG | + | chr5_1:42561576-42561595 | None:intergenic | 40.0% |
!! | TTTCGCGATTTGGTTGAAGC+AGG | + | chr5_1:42549574-42549593 | None:intergenic | 45.0% |
TTGCTCTATCAACTGGAACG+GGG | + | chr5_1:42549599-42549618 | None:intergenic | 45.0% | |
TATAGTCGCACTCTTTCTGG+CGG | - | chr5_1:42549805-42549824 | Msa0731540:intron | 45.0% | |
TGACTTTGTGGGAAAAGGCT+TGG | - | chr5_1:42550674-42550693 | Msa0731540:intron | 45.0% | |
AGTATAGAACACGCTAGTGC+AGG | + | chr5_1:42551162-42551181 | None:intergenic | 45.0% | |
TTGTTCTCCGCTAATGTCCA+TGG | + | chr5_1:42551196-42551215 | None:intergenic | 45.0% | |
CATTAGCGGAGAACAACATC+TGG | - | chr5_1:42551200-42551219 | Msa0731540:intron | 45.0% | |
CCATGAATCAAGTGTGAGCA+AGG | + | chr5_1:42551743-42551762 | None:intergenic | 45.0% | |
CCTTGCTCACACTTGATTCA+TGG | - | chr5_1:42551740-42551759 | Msa0731540:intron | 45.0% | |
AAACCCTTGCAAAGACATGG+AGG | - | chr5_1:42551803-42551822 | Msa0731540:intron | 45.0% | |
CAAGGCATGATTAGCAGTCA+AGG | - | chr5_1:42552056-42552075 | Msa0731540:intron | 45.0% | |
!!! | CAATTTTATGGCGTTGGCCA+TGG | - | chr5_1:42552215-42552234 | Msa0731540:intron | 45.0% |
AACTTTGAACCGCTCCAACT+TGG | + | chr5_1:42552300-42552319 | None:intergenic | 45.0% | |
TCAAAGTTCGCAGAATACGG+CGG | - | chr5_1:42552312-42552331 | Msa0731540:intron | 45.0% | |
!! | TCGCTACAAAGAAGAGCGTT+TGG | - | chr5_1:42552387-42552406 | Msa0731540:intron | 45.0% |
!! | TACAAAGAAGAGCGTTTGGC+CGG | - | chr5_1:42552391-42552410 | Msa0731540:intron | 45.0% |
! | GTTTTGTAGCTCCGAATGAC+AGG | - | chr5_1:42552503-42552522 | Msa0731540:intron | 45.0% |
GTTGCTTAAAGTTGCAGAGG+CGG | - | chr5_1:42552555-42552574 | Msa0731540:intron | 45.0% | |
TGAAGGAGAAGACTAGGTCT+AGG | - | chr5_1:42552589-42552608 | Msa0731540:intron | 45.0% | |
! | CGCTGGCTAATCCATGTAAT+GGG | - | chr5_1:42552948-42552967 | Msa0731540:intron | 45.0% |
GGCATCAAACAAGTGATGCA+TGG | + | chr5_1:42553021-42553040 | None:intergenic | 45.0% | |
AGAGGGTTCTCAATGTGCTT+GGG | + | chr5_1:42553324-42553343 | Msa0731550:CDS | 45.0% | |
GCATTCAGGGATTGGGATAA+AGG | - | chr5_1:42553535-42553554 | Msa0731540:intron | 45.0% | |
CAGGGATTGGGATAAAGGAT+TGG | - | chr5_1:42553540-42553559 | Msa0731540:intron | 45.0% | |
AGACCAAGCTCTCGAATTCT+TGG | - | chr5_1:42553570-42553589 | Msa0731540:intron | 45.0% | |
CAAGCTCTCGAATTCTTGGA+GGG | - | chr5_1:42553574-42553593 | Msa0731540:intron | 45.0% | |
AAGCTCTCGAATTCTTGGAG+GGG | - | chr5_1:42553575-42553594 | Msa0731540:intron | 45.0% | |
CCCAAGAAATTCGAGAGTCT+TGG | + | chr5_1:42553607-42553626 | None:intergenic | 45.0% | |
CTGCTCTGATACCAGTTGAT+AGG | + | chr5_1:42553674-42553693 | None:intergenic | 45.0% | |
! | TATCAGAGCAGTTCTGATCC+AGG | - | chr5_1:42553683-42553702 | Msa0731540:intron | 45.0% |
! | ATCAGAGCAGTTCTGATCCA+GGG | - | chr5_1:42553684-42553703 | Msa0731540:intron | 45.0% |
AATTCACAGTAGGGGGGAAA+TGG | - | chr5_1:42553712-42553731 | Msa0731540:intron | 45.0% | |
! | TTTTGATGTCGTGGGAACAC+AGG | - | chr5_1:42553796-42553815 | Msa0731540:intron | 45.0% |
GGTAGAAGGTCTCTATACTC+TGG | + | chr5_1:42553953-42553972 | None:intergenic | 45.0% | |
TCGGATGAAGAAGAGGAATC+TGG | - | chr5_1:42553977-42553996 | Msa0731540:intron | 45.0% | |
GATTGAAGGCTGAATGTGTG+AGG | + | chr5_1:42554025-42554044 | None:intergenic | 45.0% | |
ACTCATTCAGACAGCAGAAG+AGG | - | chr5_1:42554072-42554091 | Msa0731540:intron | 45.0% | |
TCAGACAGCAGAAGAGGAAA+AGG | - | chr5_1:42554078-42554097 | Msa0731540:intron | 45.0% | |
TGAGTAGTGTGTTCGAATCG+AGG | - | chr5_1:42554230-42554249 | Msa0731540:intron | 45.0% | |
GAGTAGTGTGTTCGAATCGA+GGG | - | chr5_1:42554231-42554250 | Msa0731540:intron | 45.0% | |
ACAAACACATCTGGATCTGG+CGG | + | chr5_1:42554334-42554353 | None:intergenic | 45.0% | |
ACCACAAACACATCTGGATC+TGG | + | chr5_1:42554337-42554356 | None:intergenic | 45.0% | |
CTCTTCACCACAAACACATC+TGG | + | chr5_1:42554343-42554362 | None:intergenic | 45.0% | |
GATGTGTTTGTGGTGAAGAG+TGG | - | chr5_1:42554343-42554362 | Msa0731540:intron | 45.0% | |
!! | GTGAAGAGTGGATTATCCTC+TGG | - | chr5_1:42554355-42554374 | Msa0731540:intron | 45.0% |
! | ATCCTCTGGTTTGATCGAAC+TGG | - | chr5_1:42554369-42554388 | Msa0731540:intron | 45.0% |
! | GAGGAATTTTCGGCAGCAAT+AGG | + | chr5_1:42554402-42554421 | None:intergenic | 45.0% |
! | GCATCAGACACTCTCTTTTG+GGG | + | chr5_1:42554424-42554443 | None:intergenic | 45.0% |
TGAAGTAGAGTGACAGAGCA+AGG | + | chr5_1:42554471-42554490 | None:intergenic | 45.0% | |
! | TACTTCAAGTTATGGGACCC+TGG | - | chr5_1:42554484-42554503 | Msa0731540:intron | 45.0% |
GGATAACATAACTGTCCACC+AGG | + | chr5_1:42554505-42554524 | None:intergenic | 45.0% | |
TATCCTTCACCTTGAGGACA+AGG | - | chr5_1:42554520-42554539 | Msa0731540:intron | 45.0% | |
GCATTCAGGGATTGGGATAA+AGG | - | chr5_1:42553535-42553554 | Msa0731540:intron | 45.0% | |
CAGGGATTGGGATAAAGGAT+TGG | - | chr5_1:42553540-42553559 | Msa0731540:intron | 45.0% | |
AGACCAAGCTCTCGAATTCT+TGG | - | chr5_1:42553570-42553589 | Msa0731540:intron | 45.0% | |
CAAGCTCTCGAATTCTTGGA+GGG | - | chr5_1:42553574-42553593 | Msa0731540:intron | 45.0% | |
AAGCTCTCGAATTCTTGGAG+GGG | - | chr5_1:42553575-42553594 | Msa0731540:intron | 45.0% | |
CCCAAGAAATTCGAGAGTCT+TGG | + | chr5_1:42553607-42553626 | None:intergenic | 45.0% | |
ATTTGTCTCATCCCCCTGAT+AGG | + | chr5_1:42554871-42554890 | None:intergenic | 45.0% | |
ATAGGGACTTGGGCATTATG+AGG | + | chr5_1:42554946-42554965 | None:intergenic | 45.0% | |
TGAACTGCTGATAGGGACTT+GGG | + | chr5_1:42554956-42554975 | None:intergenic | 45.0% | |
GGTGAAGGATGCAATGTGTA+TGG | - | chr5_1:42555564-42555583 | Msa0731540:CDS | 45.0% | |
TTGGAAGTAAACAAGGTGGC+AGG | - | chr5_1:42555591-42555610 | Msa0731540:CDS | 45.0% | |
TGGAAGTAAACAAGGTGGCA+GGG | - | chr5_1:42555592-42555611 | Msa0731540:CDS | 45.0% | |
! | GGGAATTTCCATTTTGCTCC+TGG | - | chr5_1:42555612-42555631 | Msa0731540:intron | 45.0% |
! | AGCTTTTCCCAGGAGCAAAA+TGG | + | chr5_1:42555623-42555642 | None:intergenic | 45.0% |
! | GATTGCTGAAAGCTTTTCCC+AGG | + | chr5_1:42555633-42555652 | None:intergenic | 45.0% |
GGGAAAAGCTTTCAGCAATC+TGG | - | chr5_1:42555633-42555652 | Msa0731540:intron | 45.0% | |
!!! | TGACCTGCTGGCTTTTCAAA+AGG | - | chr5_1:42555668-42555687 | Msa0731540:intron | 45.0% |
!! | ACTCCTTTTGAAAAGCCAGC+AGG | + | chr5_1:42555674-42555693 | None:intergenic | 45.0% |
ATGAACTAGTGACCCTTTGG+GGG | - | chr5_1:42555867-42555886 | Msa0731540:intron | 45.0% | |
TGAGTGTGAAGAGGGAATTC+AGG | - | chr5_1:42555957-42555976 | Msa0731540:intron | 45.0% | |
GAGTGTGAAGAGGGAATTCA+GGG | - | chr5_1:42555958-42555977 | Msa0731540:intron | 45.0% | |
AGTGTGAAGAGGGAATTCAG+GGG | - | chr5_1:42555959-42555978 | Msa0731540:intron | 45.0% | |
GAATTCAGGGGCTGAGTATT+GGG | - | chr5_1:42555971-42555990 | Msa0731540:intron | 45.0% | |
TGGGTGATTCCCATCATAGA+AGG | - | chr5_1:42555990-42556009 | Msa0731540:intron | 45.0% | |
GGGTGATTCCCATCATAGAA+GGG | - | chr5_1:42555991-42556010 | Msa0731540:intron | 45.0% | |
GGTGATTCCCATCATAGAAG+GGG | - | chr5_1:42555992-42556011 | Msa0731540:intron | 45.0% | |
!! | AGAAGGGGTGCTCTCAATAT+TGG | - | chr5_1:42556007-42556026 | Msa0731540:intron | 45.0% |
GAGATGAATCGCCTTGCAAA+AGG | + | chr5_1:42556049-42556068 | None:intergenic | 45.0% | |
ATTGGAAGAGATGAGGGAGA+TGG | - | chr5_1:42556231-42556250 | Msa0731540:intron | 45.0% | |
! | AAGAAATATGGAGGAGGCGT+TGG | - | chr5_1:42556285-42556304 | Msa0731540:intron | 45.0% |
TTGGAGAGGCAAGCAAAGAA+AGG | - | chr5_1:42556304-42556323 | Msa0731540:intron | 45.0% | |
! | AGATTTAGAGCAAGGGAGCA+AGG | - | chr5_1:42556360-42556379 | Msa0731540:intron | 45.0% |
AGTATAGATCCAGAGAGGTG+AGG | - | chr5_1:42556464-42556483 | Msa0731540:intron | 45.0% | |
GTATAGATCCAGAGAGGTGA+GGG | - | chr5_1:42556465-42556484 | Msa0731540:intron | 45.0% | |
AGATCAAGACTCACCACAGA+TGG | - | chr5_1:42556488-42556507 | Msa0731540:intron | 45.0% | |
AGCAAAGGATCTTCCATCTG+TGG | + | chr5_1:42556504-42556523 | None:intergenic | 45.0% | |
! | GACCAGCTTGGATCTGATTT+TGG | + | chr5_1:42556592-42556611 | None:intergenic | 45.0% |
! | CATCCTTCAGGTTTGGATCT+CGG | - | chr5_1:42556696-42556715 | Msa0731540:intron | 45.0% |
! | ATCCTTCAGGTTTGGATCTC+GGG | - | chr5_1:42556697-42556716 | Msa0731540:intron | 45.0% |
ATGGGTCTTCAGTAACGACA+GGG | - | chr5_1:42556789-42556808 | Msa0731540:intron | 45.0% | |
TTCAGTAACGACAGGGCTTT+GGG | - | chr5_1:42556796-42556815 | Msa0731540:intron | 45.0% | |
! | TTGTCTGGTGGCTTTACTGA+GGG | + | chr5_1:42556845-42556864 | None:intergenic | 45.0% |
! | TTTGTCTGGTGGCTTTACTG+AGG | + | chr5_1:42556846-42556865 | None:intergenic | 45.0% |
GAAACTGCAACTTTGTCTGG+TGG | + | chr5_1:42556857-42556876 | None:intergenic | 45.0% | |
AGTTGCAGTTTCAATGCCAC+TGG | - | chr5_1:42556865-42556884 | Msa0731540:intron | 45.0% | |
! | TATAGAGTACTCGAGCTAGG+TGG | + | chr5_1:42556896-42556915 | None:intergenic | 45.0% |
TTGTTCTTTGCATGACGGCT+TGG | + | chr5_1:42557011-42557030 | None:intergenic | 45.0% | |
TCTCTGTTTACCCTAGTCAG+CGG | + | chr5_1:42557066-42557085 | None:intergenic | 45.0% | |
!!! | GTTTTTTGAGTGCTTCCCCT+GGG | + | chr5_1:42557231-42557250 | None:intergenic | 45.0% |
!!! | TGTTTTTTGAGTGCTTCCCC+TGG | + | chr5_1:42557232-42557251 | None:intergenic | 45.0% |
!! | GGGGAAGCACTCAAAAAACA+AGG | - | chr5_1:42557232-42557251 | Msa0731540:intron | 45.0% |
GAATAAGATCCAAGACCAGG+TGG | - | chr5_1:42557315-42557334 | Msa0731540:intron | 45.0% | |
GGCTTATTATTGCAGCTGCA+AGG | - | chr5_1:42557348-42557367 | Msa0731540:intron | 45.0% | |
! | TGCAAGGAGGCTCTGTTTTA+TGG | - | chr5_1:42557364-42557383 | Msa0731540:intron | 45.0% |
AACAGTGCATTCAACCCTTG+GGG | - | chr5_1:42557404-42557423 | Msa0731540:intron | 45.0% | |
TTGCTTGGTCATCATCCTTC+AGG | - | chr5_1:42557445-42557464 | Msa0731540:intron | 45.0% | |
! | GGTCATCATCCTTCAGGTTA+TGG | - | chr5_1:42557451-42557470 | Msa0731540:intron | 45.0% |
CTAAATTCACCTCGTCCTCA+AGG | + | chr5_1:42557524-42557543 | None:intergenic | 45.0% | |
GAGGACGAGGTGAATTTAGT+TGG | - | chr5_1:42557525-42557544 | Msa0731540:intron | 45.0% | |
GACGAGGTGAATTTAGTTGG+TGG | - | chr5_1:42557528-42557547 | Msa0731540:intron | 45.0% | |
AGTGAATGGTTAGAAGGGAG+AGG | - | chr5_1:42557589-42557608 | Msa0731540:intron | 45.0% | |
GTGAATGGTTAGAAGGGAGA+GGG | - | chr5_1:42557590-42557609 | Msa0731540:intron | 45.0% | |
TGAATGGTTAGAAGGGAGAG+GGG | - | chr5_1:42557591-42557610 | Msa0731540:intron | 45.0% | |
GTAGTTCAAAGGAAGTGAGG+TGG | - | chr5_1:42557664-42557683 | Msa0731540:intron | 45.0% | |
GTGTCTGATGAGTGTGAAGT+CGG | - | chr5_1:42557696-42557715 | Msa0731540:intron | 45.0% | |
TGAGTGTGAAGTCGGAATTG+AGG | - | chr5_1:42557704-42557723 | Msa0731540:intron | 45.0% | |
GAGTGTGAAGTCGGAATTGA+GGG | - | chr5_1:42557705-42557724 | Msa0731540:intron | 45.0% | |
AGTGTGAAGTCGGAATTGAG+GGG | - | chr5_1:42557706-42557725 | Msa0731540:intron | 45.0% | |
TGTGGTGGCTTAACTGCATT+AGG | + | chr5_1:42558036-42558055 | None:intergenic | 45.0% | |
AGGCTATTCTGTTGATGTGG+TGG | + | chr5_1:42558051-42558070 | None:intergenic | 45.0% | |
!! | GCCTTTGGAGACTATTTTCC+CGG | - | chr5_1:42558067-42558086 | Msa0731540:intron | 45.0% |
ACCGGGAAAATAGTCTCCAA+AGG | + | chr5_1:42558071-42558090 | None:intergenic | 45.0% | |
TCAAGAGGGTTTACAACACC+GGG | + | chr5_1:42558088-42558107 | None:intergenic | 45.0% | |
GTCAAGAGGGTTTACAACAC+CGG | + | chr5_1:42558089-42558108 | None:intergenic | 45.0% | |
GTGTTGTAAACCCTCTTGAC+CGG | - | chr5_1:42558089-42558108 | Msa0731540:intron | 45.0% | |
! | TAATTTTGTGGTCGGTCCCT+TGG | - | chr5_1:42558442-42558461 | Msa0731540:intron | 45.0% |
! | AATTTTGTGGTCGGTCCCTT+GGG | - | chr5_1:42558443-42558462 | Msa0731540:intron | 45.0% |
TTAGTCCCTGGAGTTAACCA+GGG | + | chr5_1:42558823-42558842 | None:intergenic | 45.0% | |
TTTAGTCCCTGGAGTTAACC+AGG | + | chr5_1:42558824-42558843 | None:intergenic | 45.0% | |
CCAGGGACTAAAGTGATCAA+CGG | - | chr5_1:42558832-42558851 | Msa0731540:intron | 45.0% | |
GGACTAAAGTGATCAACGGA+AGG | - | chr5_1:42558836-42558855 | Msa0731540:intron | 45.0% | |
AATTAGCCCTCGATTGGTAG+AGG | + | chr5_1:42559427-42559446 | None:intergenic | 45.0% | |
GGAGGCAAGAGAAGTTAGTT+AGG | + | chr5_1:42559498-42559517 | None:intergenic | 45.0% | |
TTCACAGACTGCCAGTTCAT+AGG | - | chr5_1:42559590-42559609 | Msa0731540:intron | 45.0% | |
TGCCTGCACCACTAATATCA+TGG | - | chr5_1:42559814-42559833 | Msa0731540:intron | 45.0% | |
GTCCATGATATTAGTGGTGC+AGG | + | chr5_1:42559819-42559838 | None:intergenic | 45.0% | |
! | GACTGTTTTGCTCATTCCTG+TGG | - | chr5_1:42559836-42559855 | Msa0731540:intron | 45.0% |
CAGCTAGGGACACATCAAAA+AGG | + | chr5_1:42560091-42560110 | None:intergenic | 45.0% | |
CCTCCATCCAAACACACTTA+AGG | + | chr5_1:42560362-42560381 | None:intergenic | 45.0% | |
CCTTAAGTGTGTTTGGATGG+AGG | - | chr5_1:42560359-42560378 | Msa0731540:intron | 45.0% | |
TGTGTTTGGATGGAGGGTTT+AGG | - | chr5_1:42560366-42560385 | Msa0731540:intron | 45.0% | |
TTTGGATGGAGGGTTTAGGA+GGG | - | chr5_1:42560370-42560389 | Msa0731540:intron | 45.0% | |
TTGGATTGAGGGTTTAGGAG+GGG | + | chr5_1:42560571-42560590 | None:intergenic | 45.0% | |
GTTTGGATTGAGGGTTTAGG+AGG | + | chr5_1:42560573-42560592 | None:intergenic | 45.0% | |
! | CTAAGGGTGTGTTTGGATTG+AGG | + | chr5_1:42560583-42560602 | None:intergenic | 45.0% |
! | AACAGAGCTAAGGGTGTGTT+TGG | + | chr5_1:42560590-42560609 | None:intergenic | 45.0% |
!! | AACACACCCTTAGCTCTGTT+AGG | - | chr5_1:42560590-42560609 | Msa0731540:intron | 45.0% |
AGGCATCCTAACAGAGCTAA+GGG | + | chr5_1:42560599-42560618 | None:intergenic | 45.0% | |
! | AAGGCATCCTAACAGAGCTA+AGG | + | chr5_1:42560600-42560619 | None:intergenic | 45.0% |
GTGAAGTAGGCAAAGGTGAA+AGG | + | chr5_1:42560619-42560638 | None:intergenic | 45.0% | |
TGATGCAGTGAAGTAGGCAA+AGG | + | chr5_1:42560626-42560645 | None:intergenic | 45.0% | |
TTTGCCTACTTCACTGCATC+AGG | - | chr5_1:42560625-42560644 | Msa0731540:intron | 45.0% | |
TCTTCCTGATGCAGTGAAGT+AGG | + | chr5_1:42560632-42560651 | None:intergenic | 45.0% | |
ACTTCACTGCATCAGGAAGA+TGG | - | chr5_1:42560632-42560651 | Msa0731540:intron | 45.0% | |
CTCACGTCAGTGTACATAGT+TGG | + | chr5_1:42560848-42560867 | None:intergenic | 45.0% | |
ACTATGTACACTGACGTGAG+TGG | - | chr5_1:42560848-42560867 | Msa0731540:intron | 45.0% | |
CTATGTACACTGACGTGAGT+GGG | - | chr5_1:42560849-42560868 | Msa0731540:intron | 45.0% | |
GAACACTATCCAGTCAAACC+AGG | - | chr5_1:42560871-42560890 | Msa0731540:intron | 45.0% | |
GAAGAAAAAAACCCCAGGGA+GGG | + | chr5_1:42561029-42561048 | None:intergenic | 45.0% | |
AGAAGAAAAAAACCCCAGGG+AGG | + | chr5_1:42561030-42561049 | None:intergenic | 45.0% | |
AACAACAACCCAAAGGGCTA+TGG | + | chr5_1:42561108-42561127 | None:intergenic | 45.0% | |
ACCAATGTGTGTGCCATAGT+TGG | - | chr5_1:42561307-42561326 | Msa0731540:CDS | 45.0% | |
TCCAACTATGGCACACACAT+TGG | + | chr5_1:42561311-42561330 | None:intergenic | 45.0% | |
AATGTGTGTGCCATAGTTGG+AGG | - | chr5_1:42561310-42561329 | Msa0731540:CDS | 45.0% | |
!! | AGCACATACCTTGCTGTTGT+TGG | - | chr5_1:42561565-42561584 | Msa0731540:five_prime_UTR | 45.0% |
!! | AAAAAAAAAAAAAACTTATT+TGG | - | chr5_1:42552649-42552668 | Msa0731540:intron | 5.0% |
!! | AAAAAAAAAAAAACTTATTT+GGG | - | chr5_1:42552650-42552669 | Msa0731540:intron | 5.0% |
!! | TTATAAAATAAAATTATTAC+AGG | + | chr5_1:42560187-42560206 | None:intergenic | 5.0% |
!!! | TAATTTTCATTTTTAAATTA+CGG | + | chr5_1:42560532-42560551 | None:intergenic | 5.0% |
GGCTATAAGCCTAGATCAGG+TGG | - | chr5_1:42550350-42550369 | Msa0731540:intron | 50.0% | |
CGCATTCAACCACCTGATCT+AGG | + | chr5_1:42550362-42550381 | None:intergenic | 50.0% | |
AGATCAGGTGGTTGAATGCG+TGG | - | chr5_1:42550362-42550381 | Msa0731540:intron | 50.0% | |
!! | AGATGGTGGAACGCAAGCTT+AGG | - | chr5_1:42550454-42550473 | Msa0731540:intron | 50.0% |
GAACGCAAGCTTAGGTGGTT+TGG | - | chr5_1:42550462-42550481 | Msa0731540:intron | 50.0% | |
CTCGATGCCATGGACATTAG+CGG | - | chr5_1:42551186-42551205 | Msa0731540:intron | 50.0% | |
CTGCCTCCATGTCTTTGCAA+GGG | + | chr5_1:42551809-42551828 | None:intergenic | 50.0% | |
! | ATCCTGTTATGGTGCTGAGG+CGG | - | chr5_1:42551856-42551875 | Msa0731540:intron | 50.0% |
GGCGGTAAGCCATAAGGATA+AGG | - | chr5_1:42551874-42551893 | Msa0731540:intron | 50.0% | |
GAGCGCAATCTTGACAACCA+TGG | + | chr5_1:42552235-42552254 | None:intergenic | 50.0% | |
TTTGAACCGCTCCAACTTGG+TGG | + | chr5_1:42552297-42552316 | None:intergenic | 50.0% | |
!! | ACAAAGAAGAGCGTTTGGCC+GGG | - | chr5_1:42552392-42552411 | Msa0731540:intron | 50.0% |
AACTTTAAGCAACCCGCAGC+AGG | + | chr5_1:42552548-42552567 | None:intergenic | 50.0% | |
CGGGTTGCTTAAAGTTGCAG+AGG | - | chr5_1:42552552-42552571 | Msa0731540:intron | 50.0% | |
AGGCGGCTGTGTTATGTTGA+AGG | - | chr5_1:42552572-42552591 | Msa0731540:intron | 50.0% | |
!! | GATTTTGACAACCATGGCGC+TGG | - | chr5_1:42552931-42552950 | Msa0731540:intron | 50.0% |
!! | GCGCTGGCTAATCCATGTAA+TGG | - | chr5_1:42552947-42552966 | Msa0731540:intron | 50.0% |
TTTGCGCTTGCAGTCAGATG+AGG | - | chr5_1:42553060-42553079 | Msa0731540:CDS | 50.0% | |
TGCTTCACGAACTTCCTCAC+AGG | + | chr5_1:42553098-42553117 | None:intergenic | 50.0% | |
AAGCCCGGATTCAATTGACC+AGG | - | chr5_1:42553144-42553163 | Msa0731540:intron | 50.0% | |
CAGAGGGTTCTCAATGTGCT+TGG | + | chr5_1:42553325-42553344 | Msa0731550:CDS | 50.0% | |
CCTCCAAGAATTCGAGAGCT+TGG | + | chr5_1:42553576-42553595 | None:intergenic | 50.0% | |
CCAAGCTCTCGAATTCTTGG+AGG | - | chr5_1:42553573-42553592 | Msa0731540:intron | 50.0% | |
ATGCCACAATTTGACGGCAG+CGG | - | chr5_1:42553737-42553756 | Msa0731540:intron | 50.0% | |
CTATCCAACTCGCATGTGGA+TGG | + | chr5_1:42553898-42553917 | None:intergenic | 50.0% | |
AACGCTATCCAACTCGCATG+TGG | + | chr5_1:42553902-42553921 | None:intergenic | 50.0% | |
! | GGATGGGTTTCACTCGAGTT+TGG | - | chr5_1:42554283-42554302 | Msa0731540:intron | 50.0% |
TGGGTTTCACTCGAGTTTGG+CGG | - | chr5_1:42554286-42554305 | Msa0731540:intron | 50.0% | |
GCCAGATCCAGATGTGTTTG+TGG | - | chr5_1:42554333-42554352 | Msa0731540:intron | 50.0% | |
TGCCAGTTCGATCAAACCAG+AGG | + | chr5_1:42554374-42554393 | None:intergenic | 50.0% | |
!! | TCAGACACTCTCTTTTGGGG+AGG | + | chr5_1:42554421-42554440 | None:intergenic | 50.0% |
! | TTCAAGTTATGGGACCCTGG+TGG | - | chr5_1:42554487-42554506 | Msa0731540:intron | 50.0% |
CCTCCAAGAATTCGAGAGCT+TGG | + | chr5_1:42553576-42553595 | None:intergenic | 50.0% | |
CCAAGCTCTCGAATTCTTGG+AGG | - | chr5_1:42553573-42553592 | Msa0731540:intron | 50.0% | |
CTGAACTGCTGATAGGGACT+TGG | + | chr5_1:42554957-42554976 | None:intergenic | 50.0% | |
AGTGAGCAGTTAGTAGGGAG+AGG | - | chr5_1:42555830-42555849 | Msa0731540:intron | 50.0% | |
GTGAGCAGTTAGTAGGGAGA+GGG | - | chr5_1:42555831-42555850 | Msa0731540:intron | 50.0% | |
TGAGCAGTTAGTAGGGAGAG+GGG | - | chr5_1:42555832-42555851 | Msa0731540:intron | 50.0% | |
GGAATTCAGGGGCTGAGTAT+TGG | - | chr5_1:42555970-42555989 | Msa0731540:intron | 50.0% | |
!! | GAGAGCACCCCTTCTATGAT+GGG | + | chr5_1:42556002-42556021 | None:intergenic | 50.0% |
!! | TGAGAGCACCCCTTCTATGA+TGG | + | chr5_1:42556003-42556022 | None:intergenic | 50.0% |
GCTCAGATCCTTGGAGTTAC+TGG | - | chr5_1:42556176-42556195 | Msa0731540:intron | 50.0% | |
GAGATGAGGGAGATGGTAGT+AGG | - | chr5_1:42556238-42556257 | Msa0731540:intron | 50.0% | |
TGGTAGTAGGACAGAAACGC+AGG | - | chr5_1:42556251-42556270 | Msa0731540:intron | 50.0% | |
GGTAGTAGGACAGAAACGCA+GGG | - | chr5_1:42556252-42556271 | Msa0731540:intron | 50.0% | |
GTTGGATACCAGCTCGACTA+TGG | - | chr5_1:42556536-42556555 | Msa0731540:intron | 50.0% | |
TCACACATCCATAGTCGAGC+TGG | + | chr5_1:42556547-42556566 | None:intergenic | 50.0% | |
AGATCCAAGCTGGTCCACTA+TGG | - | chr5_1:42556597-42556616 | Msa0731540:intron | 50.0% | |
!! | TTCTCCATAGTGGACCAGCT+TGG | + | chr5_1:42556604-42556623 | None:intergenic | 50.0% |
AAGCTGGTCCACTATGGAGA+AGG | - | chr5_1:42556603-42556622 | Msa0731540:intron | 50.0% | |
TGGTCCACTATGGAGAAGGA+AGG | - | chr5_1:42556607-42556626 | Msa0731540:intron | 50.0% | |
GGTCCACTATGGAGAAGGAA+GGG | - | chr5_1:42556608-42556627 | Msa0731540:intron | 50.0% | |
ATGCCCTTCCTTCTCCATAG+TGG | + | chr5_1:42556614-42556633 | None:intergenic | 50.0% | |
GATGGGTCTTCAGTAACGAC+AGG | - | chr5_1:42556788-42556807 | Msa0731540:intron | 50.0% | |
CTTCAGTAACGACAGGGCTT+TGG | - | chr5_1:42556795-42556814 | Msa0731540:intron | 50.0% | |
GTTGTGAGGAACAGGTTGTC+TGG | - | chr5_1:42556916-42556935 | Msa0731540:intron | 50.0% | |
!! | CTTTTAGGAGGGGGTCTCAT+GGG | + | chr5_1:42557128-42557147 | None:intergenic | 50.0% |
!! | TCTTTTAGGAGGGGGTCTCA+TGG | + | chr5_1:42557129-42557148 | None:intergenic | 50.0% |
TGTCTCTAACCACCTGGTCT+TGG | + | chr5_1:42557327-42557346 | None:intergenic | 50.0% | |
AGACCAGGTGGTTAGAGACA+AGG | - | chr5_1:42557327-42557346 | Msa0731540:intron | 50.0% | |
! | AAGCCTTGTCTCTAACCACC+TGG | + | chr5_1:42557333-42557352 | None:intergenic | 50.0% |
TCTAGGGACCCATAACCTGA+AGG | + | chr5_1:42557463-42557482 | None:intergenic | 50.0% | |
CAAGTTTCACCTTGAGGACG+AGG | - | chr5_1:42557512-42557531 | Msa0731540:intron | 50.0% | |
!! | TACAGGTGGCTCTTTGGGAT+TGG | - | chr5_1:42557630-42557649 | Msa0731540:intron | 50.0% |
AGGAAGTGAGGTGGGAATGT+AGG | - | chr5_1:42557673-42557692 | Msa0731540:intron | 50.0% | |
GGAAGTGAGGTGGGAATGTA+GGG | - | chr5_1:42557674-42557693 | Msa0731540:intron | 50.0% | |
GGAATTGAGGGGCTGTGTAT+CGG | - | chr5_1:42557717-42557736 | Msa0731540:intron | 50.0% | |
GAATTGAGGGGCTGTGTATC+GGG | - | chr5_1:42557718-42557737 | Msa0731540:intron | 50.0% | |
AAAGAGCTCACCGGTCAAGA+GGG | + | chr5_1:42558102-42558121 | None:intergenic | 50.0% | |
TAAAGAGCTCACCGGTCAAG+AGG | + | chr5_1:42558103-42558122 | None:intergenic | 50.0% | |
TGGACACAAGAAACACCCAG+TGG | - | chr5_1:42558216-42558235 | Msa0731540:intron | 50.0% | |
GGACACAAGAAACACCCAGT+GGG | - | chr5_1:42558217-42558236 | Msa0731540:intron | 50.0% | |
GGAGTTAACCAGGGACGTTA+AGG | + | chr5_1:42558814-42558833 | None:intergenic | 50.0% | |
TAACGTCCCTGGTTAACTCC+AGG | - | chr5_1:42558814-42558833 | Msa0731540:intron | 50.0% | |
AACGTCCCTGGTTAACTCCA+GGG | - | chr5_1:42558815-42558834 | Msa0731540:intron | 50.0% | |
CCGTTGATCACTTTAGTCCC+TGG | + | chr5_1:42558835-42558854 | None:intergenic | 50.0% | |
TCCTCTCCTCTACCAATCGA+GGG | - | chr5_1:42559418-42559437 | Msa0731540:intron | 50.0% | |
TGCCAGTTCATAGGAGCTGT+CGG | - | chr5_1:42559599-42559618 | Msa0731540:intron | 50.0% | |
!! | TCGTGTAAGATGGTGCTGAC+TGG | - | chr5_1:42559649-42559668 | Msa0731540:intron | 50.0% |
!! | TGTAAGATGGTGCTGACTGG+TGG | - | chr5_1:42559652-42559671 | Msa0731540:intron | 50.0% |
!! | GTAAGATGGTGCTGACTGGT+GGG | - | chr5_1:42559653-42559672 | Msa0731540:intron | 50.0% |
GATGGTGATCGAAGTTGCCT+AGG | + | chr5_1:42559694-42559713 | None:intergenic | 50.0% | |
!! | TGAAGGAGTGGTGTTACCAC+AGG | + | chr5_1:42559855-42559874 | None:intergenic | 50.0% |
GTAACACCACTCCTTCAGTC+TGG | - | chr5_1:42559858-42559877 | Msa0731540:intron | 50.0% | |
!!! | GTCTTTTGGGACGTCTCTCA+AGG | - | chr5_1:42560326-42560345 | Msa0731540:intron | 50.0% |
GTTTGGATGGAGGGTTTAGG+AGG | - | chr5_1:42560369-42560388 | Msa0731540:intron | 50.0% | |
TTGGATGGAGGGTTTAGGAG+GGG | - | chr5_1:42560371-42560390 | Msa0731540:intron | 50.0% | |
TTGAGGGTTTAGGAGGGGAA+GGG | + | chr5_1:42560566-42560585 | None:intergenic | 50.0% | |
ATTGAGGGTTTAGGAGGGGA+AGG | + | chr5_1:42560567-42560586 | None:intergenic | 50.0% | |
!! | CACTTTAGGACGGCAGATGT+AGG | - | chr5_1:42560992-42561011 | Msa0731540:intron | 50.0% |
TGGTGGAACGCAAGCTTAGG+TGG | - | chr5_1:42550457-42550476 | Msa0731540:intron | 55.0% | |
CCTGCCTCCATGTCTTTGCA+AGG | + | chr5_1:42551810-42551829 | None:intergenic | 55.0% | |
CCTTGCAAAGACATGGAGGC+AGG | - | chr5_1:42551807-42551826 | Msa0731540:intron | 55.0% | |
! | CGGATCCTGTTATGGTGCTG+AGG | - | chr5_1:42551853-42551872 | Msa0731540:intron | 55.0% |
TACCGCCTCAGCACCATAAC+AGG | + | chr5_1:42551861-42551880 | None:intergenic | 55.0% | |
TGCTGAGGCGGTAAGCCATA+AGG | - | chr5_1:42551868-42551887 | Msa0731540:intron | 55.0% | |
! | AAGCCTCCACCAAGTTGGAG+CGG | - | chr5_1:42552288-42552307 | Msa0731540:intron | 55.0% |
!! | AGCGAAACAGAGCGCCGATT+TGG | + | chr5_1:42552372-42552391 | None:intergenic | 55.0% |
GGTTCGGAAACGGGTCATAC+GGG | + | chr5_1:42552422-42552441 | None:intergenic | 55.0% | |
! | CGGTTCGGAAACGGGTCATA+CGG | + | chr5_1:42552423-42552442 | None:intergenic | 55.0% |
CGTATGACCCGTTTCCGAAC+CGG | - | chr5_1:42552421-42552440 | Msa0731540:intron | 55.0% | |
!! | AATCTGCGCCGGTTCGGAAA+CGG | + | chr5_1:42552432-42552451 | None:intergenic | 55.0% |
TACAACCTGGGACGCGATTC+TGG | + | chr5_1:42552468-42552487 | None:intergenic | 55.0% | |
!! | ACATGGATTAGCCAGCGCCA+TGG | + | chr5_1:42552945-42552964 | None:intergenic | 55.0% |
TCACCGCTGCCGTCAAATTG+TGG | + | chr5_1:42553743-42553762 | None:intergenic | 55.0% | |
TGATGTCGTGGGAACACAGG+AGG | - | chr5_1:42553799-42553818 | Msa0731540:intron | 55.0% | |
GATGTCGTGGGAACACAGGA+GGG | - | chr5_1:42553800-42553819 | Msa0731540:intron | 55.0% | |
ACAGGAGGGTGAGAAGTTGC+TGG | - | chr5_1:42553814-42553833 | Msa0731540:intron | 55.0% | |
! | TACGAGAGCACGGTTTCGCA+AGG | + | chr5_1:42553852-42553871 | None:intergenic | 55.0% |
TGCGAAACCGTGCTCTCGTA+TGG | - | chr5_1:42553852-42553871 | Msa0731540:intron | 55.0% | |
GAAACCGTGCTCTCGTATGG+TGG | - | chr5_1:42553855-42553874 | Msa0731540:intron | 55.0% | |
ACTGCCACCATACGAGAGCA+CGG | + | chr5_1:42553862-42553881 | None:intergenic | 55.0% | |
GATGCCATCCACATGCGAGT+TGG | - | chr5_1:42553891-42553910 | Msa0731540:intron | 55.0% | |
ACATCTGGATCTGGCGGCTT+TGG | + | chr5_1:42554328-42554347 | None:intergenic | 55.0% | |
CGTACATGTGCATGACCTGC+TGG | - | chr5_1:42555656-42555675 | Msa0731540:intron | 55.0% | |
! | ACTAGTGACCCTTTGGGGGT+TGG | - | chr5_1:42555871-42555890 | Msa0731540:intron | 55.0% |
! | GGTGTCGAAGCTCAGATCCT+TGG | - | chr5_1:42556167-42556186 | Msa0731540:intron | 55.0% |
!! | ATATGGAGGAGGCGTTGGAG+AGG | - | chr5_1:42556290-42556309 | Msa0731540:intron | 55.0% |
GAGCAAGGGAGCAAGGAAGA+AGG | - | chr5_1:42556367-42556386 | Msa0731540:intron | 55.0% | |
CAAGGAAGAAGGCAGCAAGC+TGG | - | chr5_1:42556378-42556397 | Msa0731540:intron | 55.0% | |
CTTGATCTCCCTCACCTCTC+TGG | + | chr5_1:42556476-42556495 | None:intergenic | 55.0% | |
!! | GGAAGGGCATCTGACGATGA+AGG | - | chr5_1:42556624-42556643 | Msa0731540:intron | 55.0% |
TGCCCGAGATCCAAACCTGA+AGG | + | chr5_1:42556702-42556721 | None:intergenic | 55.0% | |
AGGTCACTGAGAGAGTGGGA+TGG | - | chr5_1:42556770-42556789 | Msa0731540:intron | 55.0% | |
GGTCACTGAGAGAGTGGGAT+GGG | - | chr5_1:42556771-42556790 | Msa0731540:intron | 55.0% | |
GAGCTAGGTGGTACAACCAG+TGG | + | chr5_1:42556884-42556903 | None:intergenic | 55.0% | |
TCGGGTGATTCCCATCTCAG+AGG | - | chr5_1:42557736-42557755 | Msa0731540:intron | 55.0% | |
CGGGTGATTCCCATCTCAGA+GGG | - | chr5_1:42557737-42557756 | Msa0731540:intron | 55.0% | |
GGGTGATTCCCATCTCAGAG+GGG | - | chr5_1:42557738-42557757 | Msa0731540:intron | 55.0% | |
!! | GAGAGCAACCCCTCTGAGAT+GGG | + | chr5_1:42557749-42557768 | None:intergenic | 55.0% |
! | TGAGAGCAACCCCTCTGAGA+TGG | + | chr5_1:42557750-42557769 | None:intergenic | 55.0% |
! | ATCCTCTATGGGGGCGTGTA+AGG | - | chr5_1:42558732-42558751 | Msa0731540:intron | 55.0% |
TACCTTACACGCCCCCATAG+AGG | + | chr5_1:42558737-42558756 | None:intergenic | 55.0% | |
TGCACTCTCCCCTTTCACAC+TGG | - | chr5_1:42559109-42559128 | Msa0731540:intron | 55.0% | |
CTCCTCTCCTCTACCAATCG+AGG | - | chr5_1:42559417-42559436 | Msa0731540:intron | 55.0% | |
AGCCGACAGCTCCTATGAAC+TGG | + | chr5_1:42559604-42559623 | None:intergenic | 55.0% | |
GGAAACAACAGCCACCACCT+AGG | - | chr5_1:42559674-42559693 | Msa0731540:intron | 55.0% | |
GATCGAAGTTGCCTAGGTGG+TGG | + | chr5_1:42559688-42559707 | None:intergenic | 55.0% | |
GGTGATCGAAGTTGCCTAGG+TGG | + | chr5_1:42559691-42559710 | None:intergenic | 55.0% | |
ATGGAGGGTTTAGGAGGGGA+AGG | - | chr5_1:42560375-42560394 | Msa0731540:intron | 55.0% | |
TGGAGGGTTTAGGAGGGGAA+GGG | - | chr5_1:42560376-42560395 | Msa0731540:intron | 55.0% | |
! | GAACGGGGCGTTTCGCGATT+TGG | + | chr5_1:42549584-42549603 | None:intergenic | 60.0% |
GCACCAAGCCTCCACCAAGT+TGG | - | chr5_1:42552283-42552302 | Msa0731540:intron | 60.0% | |
! | GCTCCAACTTGGTGGAGGCT+TGG | + | chr5_1:42552289-42552308 | None:intergenic | 60.0% |
! | GAACCGCTCCAACTTGGTGG+AGG | + | chr5_1:42552294-42552313 | None:intergenic | 60.0% |
ACGGGTCATACGGGTCAACC+CGG | + | chr5_1:42552413-42552432 | None:intergenic | 60.0% | |
!! | ATCTGCGCCGGTTCGGAAAC+GGG | + | chr5_1:42552431-42552450 | None:intergenic | 60.0% |
ACACTGGTGCGAATCTGCGC+CGG | + | chr5_1:42552443-42552462 | None:intergenic | 60.0% | |
! | GGACGCGATTCTGGCTACAC+TGG | + | chr5_1:42552459-42552478 | None:intergenic | 60.0% |
TGTAGCCAGAATCGCGTCCC+AGG | - | chr5_1:42552460-42552479 | Msa0731540:intron | 60.0% | |
AGGTTGGGCACTCTCAAGCC+CGG | - | chr5_1:42553129-42553148 | Msa0731540:intron | 60.0% | |
ACGGCAGCGGTGACGCTTAT+TGG | - | chr5_1:42553750-42553769 | Msa0731540:intron | 60.0% | |
GCAGCGGTGACGCTTATTGG+TGG | - | chr5_1:42553753-42553772 | Msa0731540:intron | 60.0% | |
GGAGGGTGAGAAGTTGCTGG+AGG | - | chr5_1:42553817-42553836 | Msa0731540:intron | 60.0% | |
GGGTGAGAAGTTGCTGGAGG+CGG | - | chr5_1:42553820-42553839 | Msa0731540:intron | 60.0% | |
GTGCTCTCGTATGGTGGCAG+TGG | - | chr5_1:42553861-42553880 | Msa0731540:intron | 60.0% | |
CTCTCGTATGGTGGCAGTGG+TGG | - | chr5_1:42553864-42553883 | Msa0731540:intron | 60.0% | |
GCTTTGGCAACGGTGGAGGT+AGG | + | chr5_1:42554312-42554331 | None:intergenic | 60.0% | |
! | GGATCTGGCGGCTTTGGCAA+CGG | + | chr5_1:42554322-42554341 | None:intergenic | 60.0% |
! | AGTGACCCTTTGGGGGTTGG+AGG | - | chr5_1:42555874-42555893 | Msa0731540:intron | 60.0% |
! | GTGACCCTTTGGGGGTTGGA+GGG | - | chr5_1:42555875-42555894 | Msa0731540:intron | 60.0% |
CCAACCCTCCAACCCCCAAA+GGG | + | chr5_1:42555882-42555901 | None:intergenic | 60.0% | |
TCCAACCCTCCAACCCCCAA+AGG | + | chr5_1:42555883-42555902 | None:intergenic | 60.0% | |
TGGGGGTTGGAGGGTTGGAA+AGG | - | chr5_1:42555884-42555903 | Msa0731540:intron | 60.0% | |
GGGTTGGAGGGTTGGAAAGG+AGG | - | chr5_1:42555887-42555906 | Msa0731540:intron | 60.0% | |
GGAGGGTTGGAAAGGAGGTG+AGG | - | chr5_1:42555892-42555911 | Msa0731540:intron | 60.0% | |
AAGGATGTGAGGGGGAGCTG+AGG | - | chr5_1:42555923-42555942 | Msa0731540:intron | 60.0% | |
AGGATGTGAGGGGGAGCTGA+GGG | - | chr5_1:42555924-42555943 | Msa0731540:intron | 60.0% | |
!! | TGCATGACGGCTTGGTCCGA+TGG | + | chr5_1:42557003-42557022 | None:intergenic | 60.0% |
CAGAGGGGTTGCTCTCACTG+TGG | - | chr5_1:42557753-42557772 | Msa0731540:intron | 60.0% | |
GCCCTCGATTGGTAGAGGAG+AGG | + | chr5_1:42559422-42559441 | None:intergenic | 60.0% | |
GGTTTAGGAGGGGAAGGGAG+AGG | - | chr5_1:42560381-42560400 | Msa0731540:intron | 60.0% | |
GGTTTAGGAGGGGAAGGGAG+GGG | + | chr5_1:42560381-42560400 | None:intergenic | 60.0% | |
GGGTTTAGGAGGGGAAGGGA+GGG | + | chr5_1:42560380-42560399 | None:intergenic | 60.0% | |
AGGGTTTAGGAGGGGAAGGG+AGG | + | chr5_1:42560379-42560398 | None:intergenic | 60.0% | |
!! | GGTGCGAATCTGCGCCGGTT+CGG | + | chr5_1:42552438-42552457 | None:intergenic | 65.0% |
! | TCTGGCGGCTTTGGCAACGG+TGG | + | chr5_1:42554319-42554338 | None:intergenic | 65.0% |
! | CCCTTTGGGGGTTGGAGGGT+TGG | - | chr5_1:42555879-42555898 | Msa0731540:intron | 65.0% |
GGATGTGAGGGGGAGCTGAG+GGG | - | chr5_1:42555925-42555944 | Msa0731540:intron | 65.0% | |
! | GGGGGAGCTGAGGGGTATGA+TGG | - | chr5_1:42555933-42555952 | Msa0731540:intron | 65.0% |
! | GGTGCTAGCGCCGCTGACTA+GGG | - | chr5_1:42557053-42557072 | Msa0731540:intron | 65.0% |
GCCGATTGCAGTCCCTCCCT+GGG | - | chr5_1:42561014-42561033 | Msa0731540:intron | 65.0% | |
CCCCAGGGAGGGACTGCAAT+CGG | + | chr5_1:42561018-42561037 | None:intergenic | 65.0% | |
CCGATTGCAGTCCCTCCCTG+GGG | - | chr5_1:42561015-42561034 | Msa0731540:intron | 65.0% | |
GCGGAGCGTACTGCGCACAG+AGG | - | chr5_1:42552331-42552350 | Msa0731540:intron | 70.0% | |
! | GGCGGCTTTGGCAACGGTGG+AGG | + | chr5_1:42554316-42554335 | None:intergenic | 70.0% |
! | GGGTGCTAGCGCCGCTGACT+AGG | - | chr5_1:42557052-42557071 | Msa0731540:intron | 70.0% |
GGCCGATTGCAGTCCCTCCC+TGG | - | chr5_1:42561013-42561032 | Msa0731540:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_1 | gene | 42549544 | 42561597 | 42549544 | ID=Msa0731540;Name=Msa0731540 |
chr5_1 | mRNA | 42549544 | 42561597 | 42549544 | ID=Msa0731540-mRNA-1;Parent=Msa0731540;Name=Msa0731540-mRNA-1;_AED=0.22;_eAED=0.29;_QI=195|0.90|0.91|1|0.81|0.91|12|0|372 |
chr5_1 | exon | 42549544 | 42549654 | 42549544 | ID=Msa0731540-mRNA-1:exon:12281;Parent=Msa0731540-mRNA-1 |
chr5_1 | exon | 42550072 | 42550164 | 42550072 | ID=Msa0731540-mRNA-1:exon:12280;Parent=Msa0731540-mRNA-1 |
chr5_1 | exon | 42550249 | 42550302 | 42550249 | ID=Msa0731540-mRNA-1:exon:12279;Parent=Msa0731540-mRNA-1 |
chr5_1 | exon | 42552881 | 42552932 | 42552881 | ID=Msa0731540-mRNA-1:exon:12278;Parent=Msa0731540-mRNA-1 |
chr5_1 | exon | 42553031 | 42553098 | 42553031 | ID=Msa0731540-mRNA-1:exon:12277;Parent=Msa0731540-mRNA-1 |
chr5_1 | exon | 42555440 | 42555619 | 42555440 | ID=Msa0731540-mRNA-1:exon:12276;Parent=Msa0731540-mRNA-1 |
chr5_1 | exon | 42557976 | 42558068 | 42557976 | ID=Msa0731540-mRNA-1:exon:12275;Parent=Msa0731540-mRNA-1 |
chr5_1 | exon | 42559264 | 42559344 | 42559264 | ID=Msa0731540-mRNA-1:exon:12274;Parent=Msa0731540-mRNA-1 |
chr5_1 | exon | 42559719 | 42559799 | 42559719 | ID=Msa0731540-mRNA-1:exon:12273;Parent=Msa0731540-mRNA-1 |
chr5_1 | exon | 42559914 | 42559997 | 42559914 | ID=Msa0731540-mRNA-1:exon:12272;Parent=Msa0731540-mRNA-1 |
chr5_1 | exon | 42561089 | 42561162 | 42561089 | ID=Msa0731540-mRNA-1:exon:12271;Parent=Msa0731540-mRNA-1 |
chr5_1 | exon | 42561258 | 42561597 | 42561258 | ID=Msa0731540-mRNA-1:exon:12270;Parent=Msa0731540-mRNA-1 |
chr5_1 | five_prime_UTR | 42561403 | 42561597 | 42561403 | ID=Msa0731540-mRNA-1:five_prime_utr;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42561258 | 42561402 | 42561258 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42561089 | 42561162 | 42561089 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42559914 | 42559997 | 42559914 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42559719 | 42559799 | 42559719 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42559264 | 42559344 | 42559264 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42557976 | 42558068 | 42557976 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42555440 | 42555619 | 42555440 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42553031 | 42553098 | 42553031 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42552881 | 42552932 | 42552881 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42550249 | 42550302 | 42550249 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42550072 | 42550164 | 42550072 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
chr5_1 | CDS | 42549544 | 42549654 | 42549544 | ID=Msa0731540-mRNA-1:cds;Parent=Msa0731540-mRNA-1 |
Gene Sequence |
Protein sequence |