Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735490 | XP_003616032.1 | 98.061 | 361 | 4 | 2 | 1 | 361 | 1 | 358 | 0.0 | 714 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735490 | sp|O22873|BZP18_ARATH | 51.000 | 400 | 109 | 15 | 12 | 361 | 5 | 367 | 2.09e-102 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735490 | G7K0T5 | 98.061 | 361 | 4 | 2 | 1 | 361 | 1 | 358 | 0.0 | 714 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0735490 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0735490 | Msa0814530 | 0.848833 | 4.764617e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735490 | MtrunA17_Chr5g0432701 | 98.061 | 361 | 4 | 2 | 1 | 361 | 1 | 358 | 0.0 | 714 |
| Msa0735490 | MtrunA17_Chr3g0107491 | 70.930 | 344 | 64 | 6 | 52 | 361 | 36 | 377 | 1.65e-168 | 474 |
| Msa0735490 | MtrunA17_Chr3g0128781 | 52.532 | 316 | 131 | 8 | 54 | 361 | 7 | 311 | 3.64e-94 | 283 |
| Msa0735490 | MtrunA17_Chr2g0329551 | 52.549 | 255 | 68 | 9 | 54 | 261 | 72 | 320 | 9.73e-65 | 211 |
| Msa0735490 | MtrunA17_Chr6g0463571 | 54.425 | 226 | 74 | 7 | 52 | 255 | 26 | 244 | 4.08e-61 | 198 |
| Msa0735490 | MtrunA17_Chr4g0036071 | 73.684 | 114 | 30 | 0 | 147 | 260 | 345 | 458 | 1.69e-48 | 171 |
| Msa0735490 | MtrunA17_Chr1g0156051 | 53.165 | 158 | 64 | 2 | 127 | 274 | 342 | 499 | 2.99e-31 | 124 |
| Msa0735490 | MtrunA17_Chr2g0316551 | 51.064 | 94 | 46 | 0 | 161 | 254 | 207 | 300 | 3.01e-22 | 96.3 |
| Msa0735490 | MtrunA17_Chr2g0325131 | 50.538 | 93 | 46 | 0 | 162 | 254 | 191 | 283 | 4.05e-21 | 93.2 |
| Msa0735490 | MtrunA17_Chr4g0040891 | 48.387 | 93 | 48 | 0 | 162 | 254 | 194 | 286 | 2.30e-20 | 90.5 |
| Msa0735490 | MtrunA17_Chr1g0202051 | 41.818 | 110 | 62 | 2 | 147 | 255 | 109 | 217 | 3.50e-16 | 78.2 |
| Msa0735490 | MtrunA17_Chr8g0380611 | 40.426 | 94 | 51 | 1 | 161 | 254 | 233 | 321 | 3.65e-12 | 67.0 |
| Msa0735490 | MtrunA17_Chr2g0306581 | 55.172 | 58 | 26 | 0 | 150 | 207 | 1 | 58 | 6.32e-12 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0735490 | AT2G40620.1 | 51.000 | 400 | 109 | 15 | 12 | 361 | 5 | 367 | 2.12e-103 | 309 |
| Msa0735490 | AT1G06850.1 | 57.621 | 269 | 87 | 7 | 97 | 350 | 70 | 326 | 1.08e-86 | 265 |
| Msa0735490 | AT2G31370.5 | 45.541 | 314 | 107 | 10 | 24 | 280 | 14 | 320 | 1.77e-66 | 215 |
| Msa0735490 | AT2G31370.2 | 45.541 | 314 | 107 | 10 | 24 | 280 | 14 | 320 | 8.14e-66 | 214 |
| Msa0735490 | AT2G31370.4 | 45.541 | 314 | 107 | 10 | 24 | 280 | 14 | 320 | 8.14e-66 | 214 |
| Msa0735490 | AT2G31370.1 | 45.541 | 314 | 107 | 10 | 24 | 280 | 14 | 320 | 8.14e-66 | 214 |
| Msa0735490 | AT2G31370.7 | 45.541 | 314 | 107 | 10 | 24 | 280 | 14 | 320 | 8.14e-66 | 214 |
| Msa0735490 | AT2G31370.3 | 45.541 | 314 | 107 | 10 | 24 | 280 | 14 | 320 | 8.14e-66 | 214 |
| Msa0735490 | AT2G31370.6 | 45.541 | 314 | 107 | 10 | 24 | 280 | 14 | 320 | 8.14e-66 | 214 |
| Msa0735490 | AT1G06070.1 | 50.198 | 253 | 83 | 7 | 54 | 270 | 73 | 318 | 7.25e-60 | 199 |
| Msa0735490 | AT4G38900.2 | 67.626 | 139 | 35 | 2 | 131 | 259 | 353 | 491 | 3.82e-49 | 173 |
| Msa0735490 | AT4G38900.3 | 67.626 | 139 | 35 | 2 | 131 | 259 | 353 | 491 | 3.82e-49 | 173 |
| Msa0735490 | AT1G43700.1 | 62.179 | 156 | 45 | 4 | 119 | 260 | 137 | 292 | 4.11e-49 | 169 |
| Msa0735490 | AT4G38900.1 | 64.828 | 145 | 35 | 3 | 131 | 259 | 353 | 497 | 1.39e-46 | 167 |
| Msa0735490 | AT2G21230.4 | 60.870 | 138 | 45 | 1 | 131 | 259 | 330 | 467 | 6.02e-43 | 156 |
| Msa0735490 | AT2G21230.1 | 60.870 | 138 | 45 | 1 | 131 | 259 | 330 | 467 | 6.02e-43 | 156 |
| Msa0735490 | AT1G06850.2 | 62.963 | 135 | 35 | 3 | 97 | 217 | 70 | 203 | 2.96e-41 | 145 |
| Msa0735490 | AT2G21230.3 | 64.706 | 119 | 36 | 1 | 147 | 259 | 355 | 473 | 5.15e-40 | 148 |
| Msa0735490 | AT2G21230.2 | 71.875 | 96 | 27 | 0 | 147 | 242 | 355 | 450 | 1.06e-36 | 138 |
| Msa0735490 | AT3G58120.1 | 49.462 | 93 | 47 | 0 | 162 | 254 | 202 | 294 | 1.76e-21 | 94.4 |
| Msa0735490 | AT2G42380.2 | 48.936 | 94 | 48 | 0 | 161 | 254 | 185 | 278 | 3.40e-21 | 93.2 |
| Msa0735490 | AT2G12900.1 | 43.269 | 104 | 58 | 1 | 154 | 257 | 109 | 211 | 5.04e-21 | 91.7 |
| Msa0735490 | AT2G13150.1 | 37.037 | 135 | 75 | 2 | 131 | 256 | 110 | 243 | 3.68e-18 | 83.6 |
| Msa0735490 | AT2G12940.1 | 38.532 | 109 | 66 | 1 | 148 | 256 | 135 | 242 | 1.58e-17 | 82.4 |
| Msa0735490 | AT2G42380.5 | 46.988 | 83 | 44 | 0 | 161 | 243 | 185 | 267 | 4.35e-17 | 80.9 |
| Msa0735490 | AT3G58120.2 | 47.500 | 80 | 42 | 0 | 162 | 241 | 202 | 281 | 3.20e-16 | 78.6 |
| Msa0735490 | AT2G21235.1 | 34.722 | 144 | 62 | 3 | 162 | 273 | 359 | 502 | 9.43e-15 | 75.9 |
| Msa0735490 | AT2G42380.1 | 43.617 | 94 | 42 | 1 | 161 | 254 | 185 | 267 | 1.17e-14 | 74.3 |
| Msa0735490 | AT1G58110.1 | 42.353 | 85 | 49 | 0 | 171 | 255 | 238 | 322 | 2.11e-12 | 68.2 |
| Msa0735490 | AT1G58110.2 | 42.353 | 85 | 49 | 0 | 171 | 255 | 238 | 322 | 2.11e-12 | 68.2 |
Find 147 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTAATTATTTGTTCTTT+GGG | 0.142916 | 5_1:-50833233 | Msa0735490:three_prime_UTR |
| CTTTGGGGTGCTCGCTAAAA+AGG | 0.173781 | 5_1:-50833217 | Msa0735490:three_prime_UTR |
| CTCGTTGTATCATTGTATTT+TGG | 0.182569 | 5_1:-50833159 | Msa0735490:three_prime_UTR |
| ATTCTTAATTATTTGTTCTT+TGG | 0.192606 | 5_1:-50833234 | Msa0735490:three_prime_UTR |
| AACATCCAGTTGCCATTATT+TGG | 0.230060 | 5_1:-50833554 | Msa0735490:CDS |
| TTTGGATTTGAATTGGGATT+AGG | 0.258134 | 5_1:+50837303 | None:intergenic |
| TTGGATTTGAATTGGGATTA+GGG | 0.289035 | 5_1:+50837304 | None:intergenic |
| TTCATTGACACTCCAATTCA+TGG | 0.291636 | 5_1:-50833048 | Msa0735490:three_prime_UTR |
| ATTTGGATTTGGATTTGAAT+TGG | 0.293787 | 5_1:+50837296 | None:intergenic |
| AGCTATGCCTCCTGATAAAT+TGG | 0.296982 | 5_1:-50836881 | Msa0735490:CDS |
| TAGTTGTACATCTGATTGTT+TGG | 0.297796 | 5_1:-50832977 | Msa0735490:three_prime_UTR |
| TGAGATGCATTGTGAGGATT+TGG | 0.311548 | 5_1:+50837279 | None:intergenic |
| GAGTTCGTTTGGGGAGATTA+TGG | 0.335399 | 5_1:-50836914 | Msa0735490:CDS |
| GTTGATGGGTCGAGTTCGTT+TGG | 0.349009 | 5_1:-50836925 | Msa0735490:CDS |
| ATTCCACCACAAGGTCCTTC+TGG | 0.351170 | 5_1:-50833584 | Msa0735490:CDS |
| TTTGGATTTGGATTTGAATT+GGG | 0.352095 | 5_1:+50837297 | None:intergenic |
| TTCTGAATATGAATGAGAAT+TGG | 0.357804 | 5_1:+50833490 | None:intergenic |
| TTGATGGGTCGAGTTCGTTT+GGG | 0.357989 | 5_1:-50836924 | Msa0735490:CDS |
| GAAGGACCTTGTGGTGGAAT+TGG | 0.359677 | 5_1:+50833587 | None:intergenic |
| CAAAGCTCAGCCAATTTATC+AGG | 0.368831 | 5_1:+50836871 | None:intergenic |
| TTGATTCAGTAAATTGCATT+TGG | 0.368971 | 5_1:+50833618 | None:intergenic |
| GCATTGTGAGGATTTGGATT+TGG | 0.369319 | 5_1:+50837285 | None:intergenic |
| CTGATAAATTGGCTGAGCTT+TGG | 0.380438 | 5_1:-50836870 | Msa0735490:CDS |
| AGTTGTACATCTGATTGTTT+GGG | 0.386264 | 5_1:-50832976 | Msa0735490:three_prime_UTR |
| GCGAGGGAAGAGTGAGGGTT+TGG | 0.388039 | 5_1:+50837209 | None:intergenic |
| TGGAGATGGTGGAGCAGATC+CGG | 0.389694 | 5_1:-50837007 | Msa0735490:CDS |
| CTAGCTATTCATAAAGTTCA+AGG | 0.389780 | 5_1:+50832928 | None:intergenic |
| AAGAACTCTAGTCCATGAAT+TGG | 0.397754 | 5_1:+50833036 | None:intergenic |
| CCAGTCAACATATGTACTTC+AGG | 0.401612 | 5_1:-50833283 | Msa0735490:three_prime_UTR |
| CGGCATAGTAATTCGGTTGA+TGG | 0.408325 | 5_1:-50836940 | Msa0735490:CDS |
| TGATGAGATGGCATGCTAGA+TGG | 0.419162 | 5_1:+50833524 | None:intergenic |
| TGATGATACAAATGAACAAA+GGG | 0.420881 | 5_1:+50833117 | None:intergenic |
| GTGGAGGGTGGTTGTGGTGG+TGG | 0.421120 | 5_1:+50837249 | None:intergenic |
| GAAGAGTGAGGGTTTGGCGG+TGG | 0.426383 | 5_1:+50837215 | None:intergenic |
| TGTGCTCGACGGTGGTGGGA+AGG | 0.436298 | 5_1:+50837174 | None:intergenic |
| GATGGGGAGTGACCAAATAA+TGG | 0.440624 | 5_1:+50833542 | None:intergenic |
| AATCCCATGGATAAGTTAGA+AGG | 0.447249 | 5_1:+50833327 | None:intergenic |
| ATAATGGCAACTGGATGTTC+CGG | 0.448057 | 5_1:+50833558 | None:intergenic |
| GTTGATGATCCGCCGGTGAA+TGG | 0.450476 | 5_1:+50837096 | None:intergenic |
| GCCGCCGTGGAGGGTGGTTG+TGG | 0.451630 | 5_1:+50837243 | None:intergenic |
| GAAAGAAGTTGAGAGATTGA+AGG | 0.452522 | 5_1:-50833693 | Msa0735490:CDS |
| CGGAGTGTGCTCGACGGTGG+TGG | 0.459985 | 5_1:+50837169 | None:intergenic |
| GAGGGTGGTTGTGGTGGTGG+TGG | 0.461056 | 5_1:+50837252 | None:intergenic |
| GTGGTTGCTGCCGCCGTGGA+GGG | 0.462825 | 5_1:+50837234 | None:intergenic |
| GCTTAACAGTTTACTATAGC+AGG | 0.463870 | 5_1:+50832950 | None:intergenic |
| ACCACCACAACCACCCTCCA+CGG | 0.464749 | 5_1:-50837247 | Msa0735490:CDS |
| GTCCCTGAAAACGACCAATC+TGG | 0.466033 | 5_1:+50833453 | None:intergenic |
| GAGGCACCGGCATAGTAATT+CGG | 0.477726 | 5_1:-50836947 | Msa0735490:CDS |
| TGCAGAAAGAGAAGGATCTT+CGG | 0.478143 | 5_1:+50833394 | None:intergenic |
| TCGTTTGGGGAGATTATGGA+TGG | 0.478452 | 5_1:-50836910 | Msa0735490:CDS |
| AGTGACCAAATAATGGCAAC+TGG | 0.481233 | 5_1:+50833549 | None:intergenic |
| GTTGCTCCATGGCTTGCAGA+CGG | 0.483654 | 5_1:+50833882 | None:intergenic |
| AGGGAAGAGTGAGGGTTTGG+CGG | 0.487102 | 5_1:+50837212 | None:intergenic |
| ATCCGGTGAGGTCGAGGCAC+CGG | 0.490393 | 5_1:-50836960 | Msa0735490:CDS |
| AATATGAATGAGAATTGGTT+TGG | 0.494880 | 5_1:+50833495 | None:intergenic |
| ACGGTGGTGGGAAGGGAGAT+TGG | 0.498701 | 5_1:+50837182 | None:intergenic |
| TTATTGTAGCGAGACACAAC+AGG | 0.501264 | 5_1:-50833935 | Msa0735490:intron |
| CTTAGAAGTAGAGAAAGAAA+AGG | 0.502426 | 5_1:-50837419 | Msa0735490:five_prime_UTR |
| GATCCGGGTGGAAACGATGA+GGG | 0.505257 | 5_1:-50836991 | Msa0735490:CDS |
| TTGACCTTCTAACTTATCCA+TGG | 0.505538 | 5_1:-50833331 | Msa0735490:three_prime_UTR |
| TCTTAATTATTTGTTCTTTG+GGG | 0.508199 | 5_1:-50833232 | Msa0735490:three_prime_UTR |
| ACAAATGAACAAAGGGGAAG+GGG | 0.508524 | 5_1:+50833124 | None:intergenic |
| GTGCTCGACGGTGGTGGGAA+GGG | 0.509858 | 5_1:+50837175 | None:intergenic |
| AGAAGAATCCGGTGAGGTCG+AGG | 0.511220 | 5_1:-50836966 | Msa0735490:CDS |
| GAGAGGTCCATCATGTCGTC+TGG | 0.512123 | 5_1:+50837129 | None:intergenic |
| TGCCCAACTGACACTATACC+AGG | 0.512274 | 5_1:-50834348 | Msa0735490:intron |
| TGCTCGTTCAAAAGAGAGAA+AGG | 0.513956 | 5_1:-50834435 | Msa0735490:CDS |
| TGACCTTCTAACTTATCCAT+GGG | 0.516968 | 5_1:-50833330 | Msa0735490:three_prime_UTR |
| AAGGGAGATTGGTGGTGCGA+GGG | 0.518221 | 5_1:+50837193 | None:intergenic |
| GAGTTGTAGCTTCAGTCTGT+AGG | 0.522836 | 5_1:+50834375 | None:intergenic |
| CACAAGGTCCTTCTGGTCAC+CGG | 0.525022 | 5_1:-50833577 | Msa0735490:CDS |
| CGTCGAGAACAAGTCATCTT+CGG | 0.525043 | 5_1:+50837050 | None:intergenic |
| GTTGCTGCCGCCGTGGAGGG+TGG | 0.525810 | 5_1:+50837237 | None:intergenic |
| GAAGGGAGATTGGTGGTGCG+AGG | 0.527352 | 5_1:+50837192 | None:intergenic |
| TTCTAGTTCATGTATATAGC+GGG | 0.529677 | 5_1:+50834412 | None:intergenic |
| GCCGTGGAGGGTGGTTGTGG+TGG | 0.530989 | 5_1:+50837246 | None:intergenic |
| GAGAGATTGAAGGTTGCTAC+TGG | 0.533814 | 5_1:-50833683 | Msa0735490:CDS |
| GCCGGTGAATGGATCGGAAG+GGG | 0.535786 | 5_1:+50837107 | None:intergenic |
| TGAATGGATCGGAAGGGGAG+AGG | 0.537969 | 5_1:+50837112 | None:intergenic |
| TCCCCTTCCGATCCATTCAC+CGG | 0.539027 | 5_1:-50837108 | Msa0735490:CDS |
| GGTGGTTGCTGCCGCCGTGG+AGG | 0.539358 | 5_1:+50837233 | None:intergenic |
| GAGATGTGCTTGTTGCTCCA+TGG | 0.539738 | 5_1:+50833871 | None:intergenic |
| TACATTGACATGGATAAGCT+TGG | 0.540603 | 5_1:-50837027 | Msa0735490:CDS |
| AACCTGGTATAGTGTCAGTT+GGG | 0.543208 | 5_1:+50834346 | None:intergenic |
| GATGAGATGGCATGCTAGAT+GGG | 0.545329 | 5_1:+50833525 | None:intergenic |
| CCGCCGGTGAATGGATCGGA+AGG | 0.545671 | 5_1:+50837105 | None:intergenic |
| GGAGTGTGCTCGACGGTGGT+GGG | 0.545945 | 5_1:+50837170 | None:intergenic |
| GGAGATGGTGGAGCAGATCC+GGG | 0.548529 | 5_1:-50837006 | Msa0735490:CDS |
| TTATTACAAAATGACCAGAT+TGG | 0.549243 | 5_1:-50833467 | Msa0735490:CDS |
| AGTTGTAGCTTCAGTCTGTA+GGG | 0.555319 | 5_1:+50834376 | None:intergenic |
| AAACCTGGTATAGTGTCAGT+TGG | 0.558403 | 5_1:+50834345 | None:intergenic |
| TAAGCTCCGTCTGCAAGCCA+TGG | 0.558627 | 5_1:-50833888 | Msa0735490:CDS |
| GGCATAGTAATTCGGTTGAT+GGG | 0.562173 | 5_1:-50836939 | Msa0735490:CDS |
| GTGGTGGGAAGGGAGATTGG+TGG | 0.562570 | 5_1:+50837185 | None:intergenic |
| AACTTCGCAGCAAAACCCTA+CGG | 0.565622 | 5_1:+50833186 | None:intergenic |
| ATGATGATACAAATGAACAA+AGG | 0.568945 | 5_1:+50833116 | None:intergenic |
| GTTTGGTGCAGTTGATGAGA+TGG | 0.569320 | 5_1:+50833512 | None:intergenic |
| TACAAATGAACAAAGGGGAA+GGG | 0.570276 | 5_1:+50833123 | None:intergenic |
| TTGATCCTAAGCGTGCCAAA+AGG | 0.570345 | 5_1:-50836843 | Msa0735490:intron |
| CCGCTTACCAGACGACATGA+TGG | 0.571319 | 5_1:-50837136 | Msa0735490:CDS |
| GTGGTGCGAGGGAAGAGTGA+GGG | 0.571974 | 5_1:+50837204 | None:intergenic |
| TGATCCGCCGGTGAATGGAT+CGG | 0.573063 | 5_1:+50837101 | None:intergenic |
| ATGGATAAGCTTGGAGATGG+TGG | 0.575379 | 5_1:-50837018 | Msa0735490:CDS |
| CCTGAAGTACATATGTTGAC+TGG | 0.577049 | 5_1:+50833283 | None:intergenic |
| ACGGCGAGCCTCGATGAGAT+CGG | 0.578645 | 5_1:-50837075 | Msa0735490:CDS |
| TGCCGGTGCCTCGACCTCAC+CGG | 0.579218 | 5_1:+50836958 | None:intergenic |
| GGTGGTGCGAGGGAAGAGTG+AGG | 0.580195 | 5_1:+50837203 | None:intergenic |
| ACCACAACCACCCTCCACGG+CGG | 0.580939 | 5_1:-50837244 | Msa0735490:CDS |
| ATTCACCGGCGGATCATCAA+CGG | 0.584726 | 5_1:-50837094 | Msa0735490:CDS |
| ACTTCGCAGCAAAACCCTAC+GGG | 0.593591 | 5_1:+50833187 | None:intergenic |
| GGACTTGACATTAGTAGCAA+AGG | 0.593896 | 5_1:-50833434 | Msa0735490:CDS |
| CTCTCACTTGCAGAAAGAGA+AGG | 0.594947 | 5_1:+50833386 | None:intergenic |
| TGGATGTTCCGGTGACCAGA+AGG | 0.596869 | 5_1:+50833569 | None:intergenic |
| CATCAACCGAATTACTATGC+CGG | 0.601186 | 5_1:+50836941 | None:intergenic |
| GGCGGTGGTTGCTGCCGCCG+TGG | 0.602033 | 5_1:+50837230 | None:intergenic |
| GCTCGCCGTTGATGATCCGC+CGG | 0.602248 | 5_1:+50837089 | None:intergenic |
| AGATCCGGGTGGAAACGATG+AGG | 0.602416 | 5_1:-50836992 | Msa0735490:CDS |
| TGGTAAGCGGAATGTGAGAT+CGG | 0.602899 | 5_1:+50837149 | None:intergenic |
| GTTCTAGTTCATGTATATAG+CGG | 0.607918 | 5_1:+50834411 | None:intergenic |
| CGTTTGGGGAGATTATGGAT+GGG | 0.615032 | 5_1:-50836909 | Msa0735490:CDS |
| AGCTCAGCCAATTTATCAGG+AGG | 0.617494 | 5_1:+50836874 | None:intergenic |
| TCCGGGTGGAAACGATGAGG+GGG | 0.617907 | 5_1:-50836989 | Msa0735490:CDS |
| GGATAAGTTAGAAGGTCAAG+TGG | 0.623664 | 5_1:+50833335 | None:intergenic |
| ATACAAATGAACAAAGGGGA+AGG | 0.623744 | 5_1:+50833122 | None:intergenic |
| ATCCGGGTGGAAACGATGAG+GGG | 0.624542 | 5_1:-50836990 | Msa0735490:CDS |
| TATACATGAACTAGAACGCA+AGG | 0.631345 | 5_1:-50834405 | Msa0735490:CDS |
| CAACAAGCACATCTCCGTGA+TGG | 0.633902 | 5_1:-50833863 | Msa0735490:intron |
| TGATGGGTCGAGTTCGTTTG+GGG | 0.634252 | 5_1:-50836923 | Msa0735490:CDS |
| CCATCATGTCGTCTGGTAAG+CGG | 0.636641 | 5_1:+50837136 | None:intergenic |
| GGTGATAATTGTTACCATCA+CGG | 0.643305 | 5_1:+50833849 | None:intergenic |
| GACATGGATAAGCTTGGAGA+TGG | 0.645716 | 5_1:-50837021 | Msa0735490:CDS |
| CGGTGACCAGAAGGACCTTG+TGG | 0.645804 | 5_1:+50833578 | None:intergenic |
| GTTCTCGACGTACATTGACA+TGG | 0.649912 | 5_1:-50837037 | Msa0735490:CDS |
| GATAAGTTAGAAGGTCAAGT+GGG | 0.652487 | 5_1:+50833336 | None:intergenic |
| CGCCGGTGAATGGATCGGAA+GGG | 0.655187 | 5_1:+50837106 | None:intergenic |
| TGACCAGAAGGACCTTGTGG+TGG | 0.657394 | 5_1:+50833581 | None:intergenic |
| CTTCGGATCCGATCTCATCG+AGG | 0.668290 | 5_1:+50837067 | None:intergenic |
| GATCGGAGTGTGCTCGACGG+TGG | 0.675351 | 5_1:+50837166 | None:intergenic |
| GATGGTGGAGCAGATCCGGG+TGG | 0.680229 | 5_1:-50837003 | Msa0735490:CDS |
| TACGCTCCAATTCCACCACA+AGG | 0.681715 | 5_1:-50833593 | Msa0735490:CDS |
| GATGATACAAATGAACAAAG+GGG | 0.686213 | 5_1:+50833118 | None:intergenic |
| GAAGTACATATGTTGACTGG+AGG | 0.686960 | 5_1:+50833286 | None:intergenic |
| ATGAGATGGCATGCTAGATG+GGG | 0.693250 | 5_1:+50833526 | None:intergenic |
| CGAGATTAAAAGATTCAGTG+TGG | 0.696481 | 5_1:+50833648 | None:intergenic |
| CCTTCCGATCCATTCACCGG+CGG | 0.698144 | 5_1:-50837105 | Msa0735490:CDS |
| TGAGATCGGAGTGTGCTCGA+CGG | 0.715470 | 5_1:+50837163 | None:intergenic |
| GGTAATTGAGATGCATTGTG+AGG | 0.715502 | 5_1:+50837273 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATAGTTAAAATGA+AGG | - | chr5_1:50833689-50833708 | Msa0735490:CDS | 10.0% |
| !!! | TTTAAAATAGTTAAAATGAA+GGG | - | chr5_1:50833690-50833709 | Msa0735490:CDS | 10.0% |
| !!! | AAAATTATGTTTTTCTTTTA+GGG | + | chr5_1:50834285-50834304 | None:intergenic | 10.0% |
| !!! | AAAAATTATGTTTTTCTTTT+AGG | + | chr5_1:50834286-50834305 | None:intergenic | 10.0% |
| !!! | CATATTTTTTTTTATTTAAG+TGG | - | chr5_1:50834641-50834660 | Msa0735490:intron | 10.0% |
| !!! | TATTTTTTTTTATTTAAGTG+GGG | - | chr5_1:50834643-50834662 | Msa0735490:intron | 10.0% |
| !!! | TGAATTTTTTTATTAGTTTA+TGG | - | chr5_1:50835108-50835127 | Msa0735490:intron | 10.0% |
| !!! | AATCAACATCTAATAATTTT+TGG | + | chr5_1:50834132-50834151 | None:intergenic | 15.0% |
| !!! | AAATTATGTTTTTCTTTTAG+GGG | + | chr5_1:50834284-50834303 | None:intergenic | 15.0% |
| !! | ATTGAGTGATTATATAAATT+GGG | - | chr5_1:50834529-50834548 | Msa0735490:intron | 15.0% |
| !!! | AGACTTAATTTATTTTTTTG+AGG | - | chr5_1:50834675-50834694 | Msa0735490:intron | 15.0% |
| !!! | TAACTAAAAATGTTTTTTCT+TGG | + | chr5_1:50834916-50834935 | None:intergenic | 15.0% |
| !!! | AAGAAAAAACATTTTTAGTT+AGG | - | chr5_1:50834915-50834934 | Msa0735490:intron | 15.0% |
| !!! | AGAAAAAACATTTTTAGTTA+GGG | - | chr5_1:50834916-50834935 | Msa0735490:intron | 15.0% |
| !!! | TTTTTTTTTTAATAGTGATG+AGG | - | chr5_1:50835399-50835418 | Msa0735490:intron | 15.0% |
| !!! | TTTTTTTTTAATAGTGATGA+GGG | - | chr5_1:50835400-50835419 | Msa0735490:intron | 15.0% |
| !!! | ATTTTTAATGTATTGTAAGA+AGG | + | chr5_1:50836536-50836555 | None:intergenic | 15.0% |
| !! | ATTCTTAATTATTTGTTCTT+TGG | - | chr5_1:50837127-50837146 | Msa0735490:CDS | 15.0% |
| !! | TTCTTAATTATTTGTTCTTT+GGG | - | chr5_1:50837128-50837147 | Msa0735490:CDS | 15.0% |
| !!! | TTTTAATAAGCTATCTTAGA+TGG | - | chr5_1:50833868-50833887 | Msa0735490:CDS | 20.0% |
| !!! | AATTATGTTTTTCTTTTAGG+GGG | + | chr5_1:50834283-50834302 | None:intergenic | 20.0% |
| !! | AAAAAAATTAAGTGAAAGAG+AGG | - | chr5_1:50834372-50834391 | Msa0735490:CDS | 20.0% |
| !! | GATTGAGTGATTATATAAAT+TGG | - | chr5_1:50834528-50834547 | Msa0735490:intron | 20.0% |
| !! | TTGAGTGATTATATAAATTG+GGG | - | chr5_1:50834530-50834549 | Msa0735490:intron | 20.0% |
| !! | TTCCAATTATAAACAGAATT+AGG | - | chr5_1:50834875-50834894 | Msa0735490:intron | 20.0% |
| !! | GTTAAAAAATTTCAGCAATA+GGG | + | chr5_1:50835037-50835056 | None:intergenic | 20.0% |
| !! | AGTTAAAAAATTTCAGCAAT+AGG | + | chr5_1:50835038-50835057 | None:intergenic | 20.0% |
| !!! | TTGTTTTGATAATTTTTGTG+TGG | - | chr5_1:50835204-50835223 | Msa0735490:intron | 20.0% |
| !!! | TTTTTTTTAATAGTGATGAG+GGG | - | chr5_1:50835401-50835420 | Msa0735490:intron | 20.0% |
| !! | AATTTATGATTAGAGATTAG+AGG | - | chr5_1:50835461-50835480 | Msa0735490:intron | 20.0% |
| !! | TTATACAAAAAGATTCTGAA+TGG | + | chr5_1:50835487-50835506 | None:intergenic | 20.0% |
| !!! | CTTCTTAGATTTAAACTTTT+GGG | - | chr5_1:50835741-50835760 | Msa0735490:intron | 20.0% |
| !!! | TTCTTAGATTTAAACTTTTG+GGG | - | chr5_1:50835742-50835761 | Msa0735490:intron | 20.0% |
| !! | TTTACTCATACTTAAATTTG+TGG | - | chr5_1:50836366-50836385 | Msa0735490:intron | 20.0% |
| !! | TCTTAATTATTTGTTCTTTG+GGG | - | chr5_1:50837129-50837148 | Msa0735490:CDS | 20.0% |
| ! | TTTGGATTTGGATTTGAATT+GGG | + | chr5_1:50833067-50833086 | None:intergenic | 25.0% |
| ! | ATTTGGATTTGGATTTGAAT+TGG | + | chr5_1:50833068-50833087 | None:intergenic | 25.0% |
| !! | CAATGATGAGTATTTTTCTA+TGG | - | chr5_1:50833600-50833619 | Msa0735490:CDS | 25.0% |
| !!! | TGGTTTGAGTTTTTGTTAAT+TGG | - | chr5_1:50833620-50833639 | Msa0735490:CDS | 25.0% |
| ! | TGAGTGATTATATAAATTGG+GGG | - | chr5_1:50834531-50834550 | Msa0735490:intron | 25.0% |
| !! | GTTACTTCTTTTTCTTTCTT+CGG | + | chr5_1:50834622-50834641 | None:intergenic | 25.0% |
| ! | GACCTAATTCTGTTTATAAT+TGG | + | chr5_1:50834880-50834899 | None:intergenic | 25.0% |
| !! | CAATCTAGAATCACATAATA+AGG | + | chr5_1:50835298-50835317 | None:intergenic | 25.0% |
| ! | AAAAACATTAGTGTTTGACA+TGG | - | chr5_1:50835572-50835591 | Msa0735490:intron | 25.0% |
| ! | ATATGTGTTTGGGTATTTAT+TGG | + | chr5_1:50835627-50835646 | None:intergenic | 25.0% |
| ! | ACTAACAACTATATGTGTTT+GGG | + | chr5_1:50835637-50835656 | None:intergenic | 25.0% |
| ! | ATATAGTTGTTAGTGTATCT+TGG | - | chr5_1:50835643-50835662 | Msa0735490:intron | 25.0% |
| !! | GCTTCTTAGATTTAAACTTT+TGG | - | chr5_1:50835740-50835759 | Msa0735490:intron | 25.0% |
| !! | TCTTAGATTTAAACTTTTGG+GGG | - | chr5_1:50835743-50835762 | Msa0735490:intron | 25.0% |
| ! | TTCAATTGTACTAATTGTTG+TGG | - | chr5_1:50835835-50835854 | Msa0735490:intron | 25.0% |
| !!! | AGTAACTCTGTTTTGTTTAT+TGG | - | chr5_1:50836089-50836108 | Msa0735490:intron | 25.0% |
| ! | ATAATTGGAACAAGGAAATA+AGG | + | chr5_1:50836174-50836193 | None:intergenic | 25.0% |
| !!! | TTTTAGCTATAATTGGAACA+AGG | + | chr5_1:50836182-50836201 | None:intergenic | 25.0% |
| !!! | AGTCATCTTTTAGCTATAAT+TGG | + | chr5_1:50836189-50836208 | None:intergenic | 25.0% |
| !! | TATAGCTAAAAGATGACTTT+TGG | - | chr5_1:50836191-50836210 | Msa0735490:intron | 25.0% |
| ! | TACTATACACATAATCACTT+CGG | - | chr5_1:50836272-50836291 | Msa0735490:intron | 25.0% |
| ! | CAAATAATCAAGAAGTGATT+GGG | + | chr5_1:50836401-50836420 | None:intergenic | 25.0% |
| ! | ACAAATAATCAAGAAGTGAT+TGG | + | chr5_1:50836402-50836421 | None:intergenic | 25.0% |
| ! | TTGAAGTTAATTAACTCAAC+TGG | - | chr5_1:50836603-50836622 | Msa0735490:intron | 25.0% |
| ! | TGAAGTTAATTAACTCAACT+GGG | - | chr5_1:50836604-50836623 | Msa0735490:intron | 25.0% |
| ! | TTGATTCAGTAAATTGCATT+TGG | + | chr5_1:50836746-50836765 | None:intergenic | 25.0% |
| ! | AATATGAATGAGAATTGGTT+TGG | + | chr5_1:50836869-50836888 | None:intergenic | 25.0% |
| ! | TTCTGAATATGAATGAGAAT+TGG | + | chr5_1:50836874-50836893 | None:intergenic | 25.0% |
| ! | TTATTACAAAATGACCAGAT+TGG | - | chr5_1:50836894-50836913 | Msa0735490:CDS | 25.0% |
| !! | TCGTTGTATCATTGTATTTT+GGG | - | chr5_1:50837203-50837222 | Msa0735490:CDS | 25.0% |
| ! | TGATGATACAAATGAACAAA+GGG | + | chr5_1:50837247-50837266 | None:intergenic | 25.0% |
| ! | ATGATGATACAAATGAACAA+AGG | + | chr5_1:50837248-50837267 | None:intergenic | 25.0% |
| TTGGATTTGAATTGGGATTA+GGG | + | chr5_1:50833060-50833079 | None:intergenic | 30.0% | |
| TTTGGATTTGAATTGGGATT+AGG | + | chr5_1:50833061-50833080 | None:intergenic | 30.0% | |
| GTTAAAATGAAGGGAAATTG+AGG | - | chr5_1:50833699-50833718 | Msa0735490:CDS | 30.0% | |
| AATAAGTTGTGAGACTATCT+AGG | - | chr5_1:50833794-50833813 | Msa0735490:intron | 30.0% | |
| !!! | TAATTGTTTTAGACCCTGTT+TGG | + | chr5_1:50834011-50834030 | None:intergenic | 30.0% |
| ATAAATAGGAGTGGTCAAAA+TGG | + | chr5_1:50834197-50834216 | None:intergenic | 30.0% | |
| !!! | CTCGACTCTCTTTTTAAAAT+AGG | - | chr5_1:50834257-50834276 | Msa0735490:intron | 30.0% |
| AGCATCAGATTTATGTCAAA+AGG | - | chr5_1:50834563-50834582 | Msa0735490:intron | 30.0% | |
| !!! | TTTTTTATTTAAGTGGGGTG+TGG | - | chr5_1:50834648-50834667 | Msa0735490:intron | 30.0% |
| !!! | TTTATTTTTTTGAGGCCCAT+AGG | - | chr5_1:50834683-50834702 | Msa0735490:intron | 30.0% |
| TGCTAGATTTAAACAGATGA+GGG | + | chr5_1:50834778-50834797 | None:intergenic | 30.0% | |
| TTGCTAGATTTAAACAGATG+AGG | + | chr5_1:50834779-50834798 | None:intergenic | 30.0% | |
| ! | TTTCCAAGACCAATTTTACA+GGG | + | chr5_1:50834850-50834869 | None:intergenic | 30.0% |
| ! | ATTTCCAAGACCAATTTTAC+AGG | + | chr5_1:50834851-50834870 | None:intergenic | 30.0% |
| !!! | ACATTTTTAGTTAGGGAACT+AGG | - | chr5_1:50834923-50834942 | Msa0735490:intron | 30.0% |
| ACTCATAGAACTTACAAAGT+TGG | + | chr5_1:50835333-50835352 | None:intergenic | 30.0% | |
| AAGCTCAAATACGTCAAATA+TGG | - | chr5_1:50835549-50835568 | Msa0735490:intron | 30.0% | |
| CACTAACAACTATATGTGTT+TGG | + | chr5_1:50835638-50835657 | None:intergenic | 30.0% | |
| !! | TTCTAGTTCATGTATATAGC+GGG | + | chr5_1:50835952-50835971 | None:intergenic | 30.0% |
| !! | GTTCTAGTTCATGTATATAG+CGG | + | chr5_1:50835953-50835972 | None:intergenic | 30.0% |
| TATAAATGTCAACACAAACC+TGG | + | chr5_1:50836034-50836053 | None:intergenic | 30.0% | |
| !! | AATGTTGCTTTGTTTGTGAA+TGG | - | chr5_1:50836321-50836340 | Msa0735490:intron | 30.0% |
| GTAAAAACTGAAAACACTCA+CGG | + | chr5_1:50836351-50836370 | None:intergenic | 30.0% | |
| ! | CACACTGAATCTTTTAATCT+CGG | - | chr5_1:50836714-50836733 | Msa0735490:intron | 30.0% |
| ! | GTAGCACAACATTTTGAATT+TGG | - | chr5_1:50836997-50837016 | Msa0735490:CDS | 30.0% |
| ! | CTCGTTGTATCATTGTATTT+TGG | - | chr5_1:50837202-50837221 | Msa0735490:CDS | 30.0% |
| ! | CGTTGTATCATTGTATTTTG+GGG | - | chr5_1:50837204-50837223 | Msa0735490:CDS | 30.0% |
| GATGATACAAATGAACAAAG+GGG | + | chr5_1:50837246-50837265 | None:intergenic | 30.0% | |
| TAGTTGTACATCTGATTGTT+TGG | - | chr5_1:50837384-50837403 | Msa0735490:five_prime_UTR | 30.0% | |
| AGTTGTACATCTGATTGTTT+GGG | - | chr5_1:50837385-50837404 | Msa0735490:five_prime_UTR | 30.0% | |
| TACATTGACATGGATAAGCT+TGG | - | chr5_1:50833334-50833353 | Msa0735490:three_prime_UTR | 35.0% | |
| AATAAGCTCCTTATCCAAAC+AGG | - | chr5_1:50833994-50834013 | Msa0735490:intron | 35.0% | |
| ATAAGCTCCTTATCCAAACA+GGG | - | chr5_1:50833995-50834014 | Msa0735490:intron | 35.0% | |
| ! | TTTTAGACCCTGTTTGGATA+AGG | + | chr5_1:50834005-50834024 | None:intergenic | 35.0% |
| !! | TTCAAGTTTTACTCACCTTC+CGG | - | chr5_1:50834061-50834080 | Msa0735490:intron | 35.0% |
| GAGAGGTGAAATTTACCTAA+CGG | - | chr5_1:50834389-50834408 | Msa0735490:CDS | 35.0% | |
| !! | ATTTACCTAACGGTGTTGTT+TGG | - | chr5_1:50834399-50834418 | Msa0735490:CDS | 35.0% |
| TAAATCCAAACAACACCGTT+AGG | + | chr5_1:50834407-50834426 | None:intergenic | 35.0% | |
| ATTTATCATTCCTCCGTTGT+GGG | - | chr5_1:50834422-50834441 | Msa0735490:CDS | 35.0% | |
| GTGATTATATAAATTGGGGG+TGG | - | chr5_1:50834534-50834553 | Msa0735490:intron | 35.0% | |
| TATATAAATTGGGGGTGGTT+TGG | - | chr5_1:50834539-50834558 | Msa0735490:intron | 35.0% | |
| ! | TTCCAAGACCAATTTTACAG+GGG | + | chr5_1:50834849-50834868 | None:intergenic | 35.0% |
| CAGATACATGACAGAATTAG+GGG | + | chr5_1:50834987-50835006 | None:intergenic | 35.0% | |
| CCAGATACATGACAGAATTA+GGG | + | chr5_1:50834988-50835007 | None:intergenic | 35.0% | |
| GTTGTTTGTAATTGTGCTTG+TGG | - | chr5_1:50835162-50835181 | Msa0735490:intron | 35.0% | |
| ATTATTTGACTGGGATGAGT+TGG | - | chr5_1:50835254-50835273 | Msa0735490:intron | 35.0% | |
| GTAAGTTCTATGAGTAACTG+AGG | - | chr5_1:50835338-50835357 | Msa0735490:intron | 35.0% | |
| !! | TAGATTTAAACTTTTGGGGG+TGG | - | chr5_1:50835746-50835765 | Msa0735490:intron | 35.0% |
| TATACATGAACTAGAACGCA+AGG | - | chr5_1:50835956-50835975 | Msa0735490:intron | 35.0% | |
| ACATAATCACTTCGGTGATT+TGG | - | chr5_1:50836280-50836299 | Msa0735490:intron | 35.0% | |
| CATAATCACTTCGGTGATTT+GGG | - | chr5_1:50836281-50836300 | Msa0735490:intron | 35.0% | |
| GGTGATAATTGTTACCATCA+CGG | + | chr5_1:50836515-50836534 | None:intergenic | 35.0% | |
| GAAAGAAGTTGAGAGATTGA+AGG | - | chr5_1:50836668-50836687 | Msa0735490:intron | 35.0% | |
| CGAGATTAAAAGATTCAGTG+TGG | + | chr5_1:50836716-50836735 | None:intergenic | 35.0% | |
| AACATCCAGTTGCCATTATT+TGG | - | chr5_1:50836807-50836826 | Msa0735490:intron | 35.0% | |
| GATAAGTTAGAAGGTCAAGT+GGG | + | chr5_1:50837028-50837047 | None:intergenic | 35.0% | |
| TTGACCTTCTAACTTATCCA+TGG | - | chr5_1:50837030-50837049 | Msa0735490:CDS | 35.0% | |
| TGACCTTCTAACTTATCCAT+GGG | - | chr5_1:50837031-50837050 | Msa0735490:CDS | 35.0% | |
| AATCCCATGGATAAGTTAGA+AGG | + | chr5_1:50837037-50837056 | None:intergenic | 35.0% | |
| GCTATGAAAAATGAATCCCA+TGG | + | chr5_1:50837050-50837069 | None:intergenic | 35.0% | |
| TACAAATGAACAAAGGGGAA+GGG | + | chr5_1:50837241-50837260 | None:intergenic | 35.0% | |
| ATACAAATGAACAAAGGGGA+AGG | + | chr5_1:50837242-50837261 | None:intergenic | 35.0% | |
| TTCATTGACACTCCAATTCA+TGG | - | chr5_1:50837313-50837332 | Msa0735490:CDS | 35.0% | |
| AAGAACTCTAGTCCATGAAT+TGG | + | chr5_1:50837328-50837347 | None:intergenic | 35.0% | |
| GCTTAACAGTTTACTATAGC+AGG | + | chr5_1:50837414-50837433 | None:intergenic | 35.0% | |
| GCATTGTGAGGATTTGGATT+TGG | + | chr5_1:50833079-50833098 | None:intergenic | 40.0% | |
| TGAGATGCATTGTGAGGATT+TGG | + | chr5_1:50833085-50833104 | None:intergenic | 40.0% | |
| GGTAATTGAGATGCATTGTG+AGG | + | chr5_1:50833091-50833110 | None:intergenic | 40.0% | |
| CATCAACCGAATTACTATGC+CGG | + | chr5_1:50833423-50833442 | None:intergenic | 40.0% | |
| GGCATAGTAATTCGGTTGAT+GGG | - | chr5_1:50833422-50833441 | Msa0735490:CDS | 40.0% | |
| AGCTATGCCTCCTGATAAAT+TGG | - | chr5_1:50833480-50833499 | Msa0735490:CDS | 40.0% | |
| CAAAGCTCAGCCAATTTATC+AGG | + | chr5_1:50833493-50833512 | None:intergenic | 40.0% | |
| CTGATAAATTGGCTGAGCTT+TGG | - | chr5_1:50833491-50833510 | Msa0735490:CDS | 40.0% | |
| GAACAAGAATTGTTCTGCAC+AGG | + | chr5_1:50834044-50834063 | None:intergenic | 40.0% | |
| TTTGGCATTAACCCTCCTTA+GGG | + | chr5_1:50834114-50834133 | None:intergenic | 40.0% | |
| ! | TTTTGGCATTAACCCTCCTT+AGG | + | chr5_1:50834115-50834134 | None:intergenic | 40.0% |
| ACCACTCCTATTTATGCGAT+GGG | - | chr5_1:50834202-50834221 | Msa0735490:intron | 40.0% | |
| TTCACTCCCATCGCATAAAT+AGG | + | chr5_1:50834211-50834230 | None:intergenic | 40.0% | |
| AGCCTCCTATTTCATAGGAA+CGG | + | chr5_1:50834239-50834258 | None:intergenic | 40.0% | |
| GATTTATCATTCCTCCGTTG+TGG | - | chr5_1:50834421-50834440 | Msa0735490:CDS | 40.0% | |
| GGAAAGGAGAAGGAAACAAA+TGG | - | chr5_1:50834443-50834462 | Msa0735490:CDS | 40.0% | |
| !!! | TTTTTGAGGCCCATAGGTTT+TGG | - | chr5_1:50834689-50834708 | Msa0735490:intron | 40.0% |
| ! | ATTTTACAGGGGTGATACCA+GGG | + | chr5_1:50834838-50834857 | None:intergenic | 40.0% |
| ! | AATTTTACAGGGGTGATACC+AGG | + | chr5_1:50834839-50834858 | None:intergenic | 40.0% |
| TGGTATCACCCCTGTAAAAT+TGG | - | chr5_1:50834838-50834857 | Msa0735490:intron | 40.0% | |
| ! | GGGAACTAGTTCTCAATGAA+GGG | + | chr5_1:50834967-50834986 | None:intergenic | 40.0% |
| CCCTAATTCTGTCATGTATC+TGG | - | chr5_1:50834985-50835004 | Msa0735490:intron | 40.0% | |
| GCCAGATACATGACAGAATT+AGG | + | chr5_1:50834989-50835008 | None:intergenic | 40.0% | |
| GTATCTGGCTACATGTTCAA+TGG | - | chr5_1:50835000-50835019 | Msa0735490:intron | 40.0% | |
| ACTCGTCGCAATTATTTGAC+TGG | - | chr5_1:50835244-50835263 | Msa0735490:intron | 40.0% | |
| CTCGTCGCAATTATTTGACT+GGG | - | chr5_1:50835245-50835264 | Msa0735490:intron | 40.0% | |
| !! | ATGAGTAACTGAGGCATTGT+TGG | - | chr5_1:50835347-50835366 | Msa0735490:intron | 40.0% |
| TCCACGTTGTTCTATGTAGA+TGG | - | chr5_1:50835717-50835736 | Msa0735490:intron | 40.0% | |
| CCACGTTGTTCTATGTAGAT+GGG | - | chr5_1:50835718-50835737 | Msa0735490:intron | 40.0% | |
| !! | ATTTAAACTTTTGGGGGTGG+AGG | - | chr5_1:50835749-50835768 | Msa0735490:intron | 40.0% |
| TGCTCGTTCAAAAGAGAGAA+AGG | - | chr5_1:50835926-50835945 | Msa0735490:intron | 40.0% | |
| AGTTGTAGCTTCAGTCTGTA+GGG | + | chr5_1:50835988-50836007 | None:intergenic | 40.0% | |
| AACCTGGTATAGTGTCAGTT+GGG | + | chr5_1:50836018-50836037 | None:intergenic | 40.0% | |
| AAACCTGGTATAGTGTCAGT+TGG | + | chr5_1:50836019-50836038 | None:intergenic | 40.0% | |
| GAACAAGGAAATAAGGCTCA+AGG | + | chr5_1:50836167-50836186 | None:intergenic | 40.0% | |
| TTATTGTAGCGAGACACAAC+AGG | - | chr5_1:50836426-50836445 | Msa0735490:intron | 40.0% | |
| ATAATGGCAACTGGATGTTC+CGG | + | chr5_1:50836806-50836825 | None:intergenic | 40.0% | |
| AGTGACCAAATAATGGCAAC+TGG | + | chr5_1:50836815-50836834 | None:intergenic | 40.0% | |
| GGACTTGACATTAGTAGCAA+AGG | - | chr5_1:50836927-50836946 | Msa0735490:CDS | 40.0% | |
| TGCAGAAAGAGAAGGATCTT+CGG | + | chr5_1:50836970-50836989 | None:intergenic | 40.0% | |
| GGATAAGTTAGAAGGTCAAG+TGG | + | chr5_1:50837029-50837048 | None:intergenic | 40.0% | |
| ! | GAAGTACATATGTTGACTGG+AGG | + | chr5_1:50837078-50837097 | None:intergenic | 40.0% |
| CCTGAAGTACATATGTTGAC+TGG | + | chr5_1:50837081-50837100 | None:intergenic | 40.0% | |
| CCAGTCAACATATGTACTTC+AGG | - | chr5_1:50837078-50837097 | Msa0735490:CDS | 40.0% | |
| ACAAATGAACAAAGGGGAAG+GGG | + | chr5_1:50837240-50837259 | None:intergenic | 40.0% | |
| TGGTAAGCGGAATGTGAGAT+CGG | + | chr5_1:50833215-50833234 | None:intergenic | 45.0% | |
| CGTCGAGAACAAGTCATCTT+CGG | + | chr5_1:50833314-50833333 | None:intergenic | 45.0% | |
| GTTCTCGACGTACATTGACA+TGG | - | chr5_1:50833324-50833343 | Msa0735490:three_prime_UTR | 45.0% | |
| GACATGGATAAGCTTGGAGA+TGG | - | chr5_1:50833340-50833359 | Msa0735490:three_prime_UTR | 45.0% | |
| ATGGATAAGCTTGGAGATGG+TGG | - | chr5_1:50833343-50833362 | Msa0735490:three_prime_UTR | 45.0% | |
| CGGCATAGTAATTCGGTTGA+TGG | - | chr5_1:50833421-50833440 | Msa0735490:CDS | 45.0% | |
| ! | TTGATGGGTCGAGTTCGTTT+GGG | - | chr5_1:50833437-50833456 | Msa0735490:CDS | 45.0% |
| GAGTTCGTTTGGGGAGATTA+TGG | - | chr5_1:50833447-50833466 | Msa0735490:CDS | 45.0% | |
| TCGTTTGGGGAGATTATGGA+TGG | - | chr5_1:50833451-50833470 | Msa0735490:CDS | 45.0% | |
| CGTTTGGGGAGATTATGGAT+GGG | - | chr5_1:50833452-50833471 | Msa0735490:CDS | 45.0% | |
| AGCTCAGCCAATTTATCAGG+AGG | + | chr5_1:50833490-50833509 | None:intergenic | 45.0% | |
| TTGATCCTAAGCGTGCCAAA+AGG | - | chr5_1:50833518-50833537 | Msa0735490:CDS | 45.0% | |
| ! | CATTTCGCGAACGAACCTTT+TGG | + | chr5_1:50833536-50833555 | None:intergenic | 45.0% |
| CAATCTGTCGAACCTTCTCT+CGG | - | chr5_1:50833735-50833754 | Msa0735490:intron | 45.0% | |
| TTCTCTCGGAGTTGTGCTAA+GGG | - | chr5_1:50833749-50833768 | Msa0735490:intron | 45.0% | |
| AGTTGTGCTAAGGGTCTGTT+TGG | - | chr5_1:50833758-50833777 | Msa0735490:intron | 45.0% | |
| TTGGCATTAACCCTCCTTAG+GGG | + | chr5_1:50834113-50834132 | None:intergenic | 45.0% | |
| GACCACTCCTATTTATGCGA+TGG | - | chr5_1:50834201-50834220 | Msa0735490:intron | 45.0% | |
| TCCCATCGCATAAATAGGAG+TGG | + | chr5_1:50834206-50834225 | None:intergenic | 45.0% | |
| TTTATGCGATGGGAGTGAAC+AGG | - | chr5_1:50834212-50834231 | Msa0735490:intron | 45.0% | |
| TTATGCGATGGGAGTGAACA+GGG | - | chr5_1:50834213-50834232 | Msa0735490:intron | 45.0% | |
| AGTCGAGCCTCCTATTTCAT+AGG | + | chr5_1:50834244-50834263 | None:intergenic | 45.0% | |
| TTCCTTCTCCTTTCCCACAA+CGG | + | chr5_1:50834438-50834457 | None:intergenic | 45.0% | |
| ! | CACCCCTGTAAAATTGGTCT+TGG | - | chr5_1:50834844-50834863 | Msa0735490:intron | 45.0% |
| ! | GGGGAACTAGTTCTCAATGA+AGG | + | chr5_1:50834968-50834987 | None:intergenic | 45.0% |
| CCCATCTACATAGAACAACG+TGG | + | chr5_1:50835721-50835740 | None:intergenic | 45.0% | |
| GTGGAGGATAATGTGAGAGT+GGG | - | chr5_1:50835765-50835784 | Msa0735490:intron | 45.0% | |
| TGGAGGATAATGTGAGAGTG+GGG | - | chr5_1:50835766-50835785 | Msa0735490:intron | 45.0% | |
| GAGTTGTAGCTTCAGTCTGT+AGG | + | chr5_1:50835989-50836008 | None:intergenic | 45.0% | |
| GAGAGATTGAAGGTTGCTAC+TGG | - | chr5_1:50836678-50836697 | Msa0735490:intron | 45.0% | |
| GATGGGGAGTGACCAAATAA+TGG | + | chr5_1:50836822-50836841 | None:intergenic | 45.0% | |
| ATGAGATGGCATGCTAGATG+GGG | + | chr5_1:50836838-50836857 | None:intergenic | 45.0% | |
| GATGAGATGGCATGCTAGAT+GGG | + | chr5_1:50836839-50836858 | None:intergenic | 45.0% | |
| TGATGAGATGGCATGCTAGA+TGG | + | chr5_1:50836840-50836859 | None:intergenic | 45.0% | |
| !! | GTTTGGTGCAGTTGATGAGA+TGG | + | chr5_1:50836852-50836871 | None:intergenic | 45.0% |
| !! | TGACCAGATTGGTCGTTTTC+AGG | - | chr5_1:50836905-50836924 | Msa0735490:CDS | 45.0% |
| !! | GACCAGATTGGTCGTTTTCA+GGG | - | chr5_1:50836906-50836925 | Msa0735490:CDS | 45.0% |
| CTCTCACTTGCAGAAAGAGA+AGG | + | chr5_1:50836978-50836997 | None:intergenic | 45.0% | |
| ! | TTTGGGGTGCTCGCTAAAAA+GGG | - | chr5_1:50837145-50837164 | Msa0735490:CDS | 45.0% |
| AACTTCGCAGCAAAACCCTA+CGG | + | chr5_1:50837178-50837197 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTATTAGTTT+AGG | - | chr5_1:50833664-50833683 | Msa0735490:CDS | 5.0% |
| !!! | TTTTTTTTTTTATTAGTTTA+GGG | - | chr5_1:50833665-50833684 | Msa0735490:CDS | 5.0% |
| !!! | ATATTTTTTTTTATTTAAGT+GGG | - | chr5_1:50834642-50834661 | Msa0735490:intron | 5.0% |
| CCATCATGTCGTCTGGTAAG+CGG | + | chr5_1:50833228-50833247 | None:intergenic | 50.0% | |
| ATTCACCGGCGGATCATCAA+CGG | - | chr5_1:50833267-50833286 | Msa0735490:three_prime_UTR | 50.0% | |
| !! | GAGGCACCGGCATAGTAATT+CGG | - | chr5_1:50833414-50833433 | Msa0735490:CDS | 50.0% |
| ! | GTTGATGGGTCGAGTTCGTT+TGG | - | chr5_1:50833436-50833455 | Msa0735490:CDS | 50.0% |
| ! | TGATGGGTCGAGTTCGTTTG+GGG | - | chr5_1:50833438-50833457 | Msa0735490:CDS | 50.0% |
| ! | ACGAACCTTTTGGCACGCTT+AGG | + | chr5_1:50833526-50833545 | None:intergenic | 50.0% |
| CTTAGCACAACTCCGAGAGA+AGG | + | chr5_1:50833750-50833769 | None:intergenic | 50.0% | |
| CTTCTCTCGGAGTTGTGCTA+AGG | - | chr5_1:50833748-50833767 | Msa0735490:intron | 50.0% | |
| TAATCCGGAATTTGGCCGGA+AGG | + | chr5_1:50834079-50834098 | None:intergenic | 50.0% | |
| CCTGTAATCCGGAATTTGGC+CGG | + | chr5_1:50834083-50834102 | None:intergenic | 50.0% | |
| GAGGCCTGTAATCCGGAATT+TGG | + | chr5_1:50834087-50834106 | None:intergenic | 50.0% | |
| TTACAGGCCTCTTTCCCCTA+AGG | - | chr5_1:50834096-50834115 | Msa0735490:intron | 50.0% | |
| TAACCCTCCTTAGGGGAAAG+AGG | + | chr5_1:50834106-50834125 | None:intergenic | 50.0% | |
| GTGGTCAAAATGGCTGCTAG+TGG | + | chr5_1:50834187-50834206 | None:intergenic | 50.0% | |
| CAGGGCCGTTCCTATGAAAT+AGG | - | chr5_1:50834231-50834250 | Msa0735490:intron | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | - | chr5_1:50834234-50834253 | Msa0735490:intron | 50.0% | |
| TCATTCCTCCGTTGTGGGAA+AGG | - | chr5_1:50834427-50834446 | Msa0735490:CDS | 50.0% | |
| !! | TTGAGGCCCATAGGTTTTGG+AGG | - | chr5_1:50834692-50834711 | Msa0735490:intron | 50.0% |
| GGGTTAAGTGTTTCACTCCC+AGG | + | chr5_1:50834758-50834777 | None:intergenic | 50.0% | |
| ATCGACAGTTAGAGTGACCC+TGG | - | chr5_1:50834818-50834837 | Msa0735490:intron | 50.0% | |
| GGTGGAGGATAATGTGAGAG+TGG | - | chr5_1:50835764-50835783 | Msa0735490:intron | 50.0% | |
| TGCCCAACTGACACTATACC+AGG | - | chr5_1:50836013-50836032 | Msa0735490:intron | 50.0% | |
| ! | GAGATGTGCTTGTTGCTCCA+TGG | + | chr5_1:50836493-50836512 | None:intergenic | 50.0% |
| CAACAAGCACATCTCCGTGA+TGG | - | chr5_1:50836498-50836517 | Msa0735490:intron | 50.0% | |
| TACGCTCCAATTCCACCACA+AGG | - | chr5_1:50836768-50836787 | Msa0735490:intron | 50.0% | |
| ! | GAAGGACCTTGTGGTGGAAT+TGG | + | chr5_1:50836777-50836796 | None:intergenic | 50.0% |
| ATTCCACCACAAGGTCCTTC+TGG | - | chr5_1:50836777-50836796 | Msa0735490:intron | 50.0% | |
| GTCCCTGAAAACGACCAATC+TGG | + | chr5_1:50836911-50836930 | None:intergenic | 50.0% | |
| !! | CTTTGGGGTGCTCGCTAAAA+AGG | - | chr5_1:50837144-50837163 | Msa0735490:CDS | 50.0% |
| ! | TTGGGGTGCTCGCTAAAAAG+GGG | - | chr5_1:50837146-50837165 | Msa0735490:CDS | 50.0% |
| !! | TAAAAAGGGGAAGCACCCGT+AGG | - | chr5_1:50837159-50837178 | Msa0735490:CDS | 50.0% |
| !! | AAAAAGGGGAAGCACCCGTA+GGG | - | chr5_1:50837160-50837179 | Msa0735490:CDS | 50.0% |
| ACTTCGCAGCAAAACCCTAC+GGG | + | chr5_1:50837177-50837196 | None:intergenic | 50.0% | |
| AGGGAAGAGTGAGGGTTTGG+CGG | + | chr5_1:50833152-50833171 | None:intergenic | 55.0% | |
| !! | AAGGGAGATTGGTGGTGCGA+GGG | + | chr5_1:50833171-50833190 | None:intergenic | 55.0% |
| TGAGATCGGAGTGTGCTCGA+CGG | + | chr5_1:50833201-50833220 | None:intergenic | 55.0% | |
| CCGCTTACCAGACGACATGA+TGG | - | chr5_1:50833225-50833244 | Msa0735490:three_prime_UTR | 55.0% | |
| GAGAGGTCCATCATGTCGTC+TGG | + | chr5_1:50833235-50833254 | None:intergenic | 55.0% | |
| TGAATGGATCGGAAGGGGAG+AGG | + | chr5_1:50833252-50833271 | None:intergenic | 55.0% | |
| TCCCCTTCCGATCCATTCAC+CGG | - | chr5_1:50833253-50833272 | Msa0735490:three_prime_UTR | 55.0% | |
| TGATCCGCCGGTGAATGGAT+CGG | + | chr5_1:50833263-50833282 | None:intergenic | 55.0% | |
| !! | GTTGATGATCCGCCGGTGAA+TGG | + | chr5_1:50833268-50833287 | None:intergenic | 55.0% |
| CTTCGGATCCGATCTCATCG+AGG | + | chr5_1:50833297-50833316 | None:intergenic | 55.0% | |
| !! | TGGAGATGGTGGAGCAGATC+CGG | - | chr5_1:50833354-50833373 | Msa0735490:exon | 55.0% |
| AGATCCGGGTGGAAACGATG+AGG | - | chr5_1:50833369-50833388 | Msa0735490:exon | 55.0% | |
| GATCCGGGTGGAAACGATGA+GGG | - | chr5_1:50833370-50833389 | Msa0735490:CDS | 55.0% | |
| ATCCGGGTGGAAACGATGAG+GGG | - | chr5_1:50833371-50833390 | Msa0735490:CDS | 55.0% | |
| CGATGAGGGGGAGAAGAATC+CGG | - | chr5_1:50833384-50833403 | Msa0735490:CDS | 55.0% | |
| AGAAGAATCCGGTGAGGTCG+AGG | - | chr5_1:50833395-50833414 | Msa0735490:CDS | 55.0% | |
| CTCACCTTCCGGCCAAATTC+CGG | - | chr5_1:50834072-50834091 | Msa0735490:intron | 55.0% | |
| CCGGCCAAATTCCGGATTAC+AGG | - | chr5_1:50834080-50834099 | Msa0735490:intron | 55.0% | |
| GGGGAAAGAGGCCTGTAATC+CGG | + | chr5_1:50834094-50834113 | None:intergenic | 55.0% | |
| AGGCCTCTTTCCCCTAAGGA+GGG | - | chr5_1:50834100-50834119 | Msa0735490:intron | 55.0% | |
| CTTCTCCTTTCCCACAACGG+AGG | + | chr5_1:50834435-50834454 | None:intergenic | 55.0% | |
| CTCCGTTGTGGGAAAGGAGA+AGG | - | chr5_1:50834433-50834452 | Msa0735490:CDS | 55.0% | |
| AAGTGTTTCACTCCCAGGCC+CGG | + | chr5_1:50834753-50834772 | None:intergenic | 55.0% | |
| TAAGCTCCGTCTGCAAGCCA+TGG | - | chr5_1:50836473-50836492 | Msa0735490:intron | 55.0% | |
| ! | GTTGCTCCATGGCTTGCAGA+CGG | + | chr5_1:50836482-50836501 | None:intergenic | 55.0% |
| TGACCAGAAGGACCTTGTGG+TGG | + | chr5_1:50836783-50836802 | None:intergenic | 55.0% | |
| CACAAGGTCCTTCTGGTCAC+CGG | - | chr5_1:50836784-50836803 | Msa0735490:intron | 55.0% | |
| TGGATGTTCCGGTGACCAGA+AGG | + | chr5_1:50836795-50836814 | None:intergenic | 55.0% | |
| ACCACCACAACCACCCTCCA+CGG | - | chr5_1:50833114-50833133 | Msa0735490:three_prime_UTR | 60.0% | |
| GAAGAGTGAGGGTTTGGCGG+TGG | + | chr5_1:50833149-50833168 | None:intergenic | 60.0% | |
| GCGAGGGAAGAGTGAGGGTT+TGG | + | chr5_1:50833155-50833174 | None:intergenic | 60.0% | |
| GTGGTGCGAGGGAAGAGTGA+GGG | + | chr5_1:50833160-50833179 | None:intergenic | 60.0% | |
| !! | GAAGGGAGATTGGTGGTGCG+AGG | + | chr5_1:50833172-50833191 | None:intergenic | 60.0% |
| ! | GTGGTGGGAAGGGAGATTGG+TGG | + | chr5_1:50833179-50833198 | None:intergenic | 60.0% |
| !! | ACGGTGGTGGGAAGGGAGAT+TGG | + | chr5_1:50833182-50833201 | None:intergenic | 60.0% |
| GCCGGTGAATGGATCGGAAG+GGG | + | chr5_1:50833257-50833276 | None:intergenic | 60.0% | |
| CGCCGGTGAATGGATCGGAA+GGG | + | chr5_1:50833258-50833277 | None:intergenic | 60.0% | |
| CCTTCCGATCCATTCACCGG+CGG | - | chr5_1:50833256-50833275 | Msa0735490:three_prime_UTR | 60.0% | |
| ACGGCGAGCCTCGATGAGAT+CGG | - | chr5_1:50833286-50833305 | Msa0735490:three_prime_UTR | 60.0% | |
| !! | GGAGATGGTGGAGCAGATCC+GGG | - | chr5_1:50833355-50833374 | Msa0735490:exon | 60.0% |
| TCCGGGTGGAAACGATGAGG+GGG | - | chr5_1:50833372-50833391 | Msa0735490:CDS | 60.0% | |
| TCCCCCTCATCGTTTCCACC+CGG | + | chr5_1:50833376-50833395 | None:intergenic | 60.0% | |
| AGGGGGAGAAGAATCCGGTG+AGG | - | chr5_1:50833389-50833408 | Msa0735490:CDS | 60.0% | |
| CAGGCCTCTTTCCCCTAAGG+AGG | - | chr5_1:50834099-50834118 | Msa0735490:intron | 60.0% | |
| !!! | GCCCATAGGTTTTGGAGGCC+CGG | - | chr5_1:50834697-50834716 | Msa0735490:intron | 60.0% |
| GCCGGGCCTCCAAAACCTAT+GGG | + | chr5_1:50834701-50834720 | None:intergenic | 60.0% | |
| AGCCGGGCCTCCAAAACCTA+TGG | + | chr5_1:50834702-50834721 | None:intergenic | 60.0% | |
| !!! | TAGGTTTTGGAGGCCCGGCT+TGG | - | chr5_1:50834702-50834721 | Msa0735490:intron | 60.0% |
| GCAAGCAGCTCAACCAAGCC+GGG | + | chr5_1:50834718-50834737 | None:intergenic | 60.0% | |
| CGCAAGCAGCTCAACCAAGC+CGG | + | chr5_1:50834719-50834738 | None:intergenic | 60.0% | |
| CGGTGACCAGAAGGACCTTG+TGG | + | chr5_1:50836786-50836805 | None:intergenic | 60.0% | |
| !! | GAGGGTGGTTGTGGTGGTGG+TGG | + | chr5_1:50833112-50833131 | None:intergenic | 65.0% |
| GTGGAGGGTGGTTGTGGTGG+TGG | + | chr5_1:50833115-50833134 | None:intergenic | 65.0% | |
| ACCACAACCACCCTCCACGG+CGG | - | chr5_1:50833117-50833136 | Msa0735490:three_prime_UTR | 65.0% | |
| GGTGGTGCGAGGGAAGAGTG+AGG | + | chr5_1:50833161-50833180 | None:intergenic | 65.0% | |
| !! | GTGCTCGACGGTGGTGGGAA+GGG | + | chr5_1:50833189-50833208 | None:intergenic | 65.0% |
| !! | TGTGCTCGACGGTGGTGGGA+AGG | + | chr5_1:50833190-50833209 | None:intergenic | 65.0% |
| GGAGTGTGCTCGACGGTGGT+GGG | + | chr5_1:50833194-50833213 | None:intergenic | 65.0% | |
| GATCGGAGTGTGCTCGACGG+TGG | + | chr5_1:50833198-50833217 | None:intergenic | 65.0% | |
| CCGCCGGTGAATGGATCGGA+AGG | + | chr5_1:50833259-50833278 | None:intergenic | 65.0% | |
| !! | GCTCGCCGTTGATGATCCGC+CGG | + | chr5_1:50833275-50833294 | None:intergenic | 65.0% |
| !! | GATGGTGGAGCAGATCCGGG+TGG | - | chr5_1:50833358-50833377 | Msa0735490:exon | 65.0% |
| ATCCGGTGAGGTCGAGGCAC+CGG | - | chr5_1:50833401-50833420 | Msa0735490:CDS | 65.0% | |
| GCCGTGGAGGGTGGTTGTGG+TGG | + | chr5_1:50833118-50833137 | None:intergenic | 70.0% | |
| GTGGTTGCTGCCGCCGTGGA+GGG | + | chr5_1:50833130-50833149 | None:intergenic | 70.0% | |
| CGGAGTGTGCTCGACGGTGG+TGG | + | chr5_1:50833195-50833214 | None:intergenic | 70.0% | |
| TGCCGGTGCCTCGACCTCAC+CGG | + | chr5_1:50833406-50833425 | None:intergenic | 70.0% | |
| GAGCTGCTTGCGCACCCCCA+AGG | - | chr5_1:50834727-50834746 | Msa0735490:intron | 70.0% | |
| TGCTTGCGCACCCCCAAGGC+CGG | - | chr5_1:50834731-50834750 | Msa0735490:intron | 70.0% | |
| TCACTCCCAGGCCCGGCCTT+GGG | + | chr5_1:50834746-50834765 | None:intergenic | 70.0% | |
| TTCACTCCCAGGCCCGGCCT+TGG | + | chr5_1:50834747-50834766 | None:intergenic | 70.0% | |
| GCCGCCGTGGAGGGTGGTTG+TGG | + | chr5_1:50833121-50833140 | None:intergenic | 75.0% | |
| GTTGCTGCCGCCGTGGAGGG+TGG | + | chr5_1:50833127-50833146 | None:intergenic | 75.0% | |
| GGTGGTTGCTGCCGCCGTGG+AGG | + | chr5_1:50833131-50833150 | None:intergenic | 75.0% | |
| GCTTGCGCACCCCCAAGGCC+GGG | - | chr5_1:50834732-50834751 | Msa0735490:intron | 75.0% | |
| ACTCCCAGGCCCGGCCTTGG+GGG | + | chr5_1:50834744-50834763 | None:intergenic | 75.0% | |
| CACTCCCAGGCCCGGCCTTG+GGG | + | chr5_1:50834745-50834764 | None:intergenic | 75.0% | |
| ! | GGCGGTGGTTGCTGCCGCCG+TGG | + | chr5_1:50833134-50833153 | None:intergenic | 80.0% |
| ! | GCACCCCCAAGGCCGGGCCT+GGG | - | chr5_1:50834738-50834757 | Msa0735490:intron | 80.0% |
| ! | CGCACCCCCAAGGCCGGGCC+TGG | - | chr5_1:50834737-50834756 | Msa0735490:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 50832943 | 50837440 | 50832943 | ID=Msa0735490;Name=Msa0735490 |
| chr5_1 | mRNA | 50832943 | 50837440 | 50832943 | ID=Msa0735490-mRNA-1;Parent=Msa0735490;Name=Msa0735490-mRNA-1;_AED=0.07;_eAED=0.07;_QI=94|1|1|1|1|1|4|427|361 |
| chr5_1 | exon | 50832943 | 50833734 | 50832943 | ID=Msa0735490-mRNA-1:exon:14344;Parent=Msa0735490-mRNA-1 |
| chr5_1 | exon | 50833864 | 50833948 | 50833864 | ID=Msa0735490-mRNA-1:exon:14343;Parent=Msa0735490-mRNA-1 |
| chr5_1 | exon | 50834349 | 50834481 | 50834349 | ID=Msa0735490-mRNA-1:exon:14342;Parent=Msa0735490-mRNA-1 |
| chr5_1 | exon | 50836844 | 50837440 | 50836844 | ID=Msa0735490-mRNA-1:exon:14341;Parent=Msa0735490-mRNA-1 |
| chr5_1 | five_prime_UTR | 50837347 | 50837440 | 50837347 | ID=Msa0735490-mRNA-1:five_prime_utr;Parent=Msa0735490-mRNA-1 |
| chr5_1 | CDS | 50836844 | 50837346 | 50836844 | ID=Msa0735490-mRNA-1:cds;Parent=Msa0735490-mRNA-1 |
| chr5_1 | CDS | 50834349 | 50834481 | 50834349 | ID=Msa0735490-mRNA-1:cds;Parent=Msa0735490-mRNA-1 |
| chr5_1 | CDS | 50833864 | 50833948 | 50833864 | ID=Msa0735490-mRNA-1:cds;Parent=Msa0735490-mRNA-1 |
| chr5_1 | CDS | 50833370 | 50833734 | 50833370 | ID=Msa0735490-mRNA-1:cds;Parent=Msa0735490-mRNA-1 |
| chr5_1 | three_prime_UTR | 50832943 | 50833369 | 50832943 | ID=Msa0735490-mRNA-1:three_prime_utr;Parent=Msa0735490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
