AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0742520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742520 MtrunA17_Chr5g0444311 89.610 462 41 1 1 455 1 462 0.0 793
Msa0742520 MtrunA17_Chr8g0362521 64.773 440 149 6 19 455 15 451 0.0 528
Msa0742520 MtrunA17_Chr8g0362461 60.310 451 133 11 14 454 4 418 1.31e-168 480
Msa0742520 MtrunA17_Chr8g0362021 58.370 454 171 9 9 454 9 452 2.64e-164 471
Msa0742520 MtrunA17_Chr2g0319941 53.020 447 192 7 17 454 19 456 1.93e-139 407
Msa0742520 MtrunA17_Chr8g0362491 48.932 468 207 12 4 454 10 462 1.03e-136 401
Msa0742520 MtrunA17_Chr8g0360061 50.844 474 189 13 14 454 14 476 2.72e-136 400
Msa0742520 MtrunA17_Chr8g0363951 66.045 268 85 3 190 454 1 265 8.63e-116 340
Msa0742520 MtrunA17_Chr4g0014361 52.698 315 124 4 161 455 3 312 3.50e-96 292
Msa0742520 MtrunA17_Chr8g0362591 41.538 455 236 10 19 454 7 450 2.65e-94 292
Msa0742520 MtrunA17_Chr8g0360071 41.845 466 240 11 8 454 2 455 1.30e-90 283
Msa0742520 MtrunA17_Chr4g0025351 40.725 469 247 11 10 454 12 473 4.07e-90 282
Msa0742520 MtrunA17_Chr8g0358771 46.797 359 171 11 105 454 3 350 1.23e-86 269
Msa0742520 MtrunA17_Chr8g0369261 39.565 460 241 13 5 454 1 433 6.81e-84 265
Msa0742520 MtrunA17_Chr8g0363821 37.363 455 233 14 19 454 23 444 2.56e-75 243
Msa0742520 MtrunA17_Chr8g0363981 36.748 449 241 11 11 454 17 427 8.39e-75 241
Msa0742520 MtrunA17_Chr8g0363971 33.197 488 263 13 6 454 13 476 3.28e-62 209
Msa0742520 MtrunA17_Chr8g0340591 46.269 268 130 8 192 454 9 267 1.81e-60 198
Msa0742520 MtrunA17_Chr4g0011341 42.857 301 152 11 162 454 18 306 4.38e-57 191
Msa0742520 MtrunA17_Chr8g0363941 59.060 149 57 2 16 161 13 160 8.54e-54 178
Msa0742520 MtrunA17_Chr8g0373051 33.551 459 209 20 9 454 2 377 1.63e-50 176
Msa0742520 MtrunA17_Chr4g0014371 52.439 164 65 4 5 161 1 158 3.19e-49 165
Msa0742520 MtrunA17_Chr8g0362001 41.034 290 145 11 18 298 83 355 1.16e-47 167
Msa0742520 MtrunA17_Chr4g0011381 42.623 244 124 8 198 436 2 234 1.18e-42 150
Msa0742520 MtrunA17_Chr8g0363791 35.249 261 150 6 200 454 14 261 2.00e-34 129
Msa0742520 MtrunA17_Chr5g0438191 30.090 442 269 17 15 447 9 419 5.28e-33 129
Msa0742520 MtrunA17_Chr5g0405101 46.452 155 74 6 12 161 12 162 7.27e-33 122
Msa0742520 MtrunA17_Chr5g0435741 30.337 445 271 19 15 447 29 446 1.99e-32 128
Msa0742520 MtrunA17_Chr8g0363801 46.154 143 74 2 19 161 9 148 6.61e-31 116
Msa0742520 MtrunA17_Chr5g0405111 42.935 184 92 4 187 359 3 184 8.40e-31 118
Msa0742520 MtrunA17_Chr5g0405111 48.276 87 42 2 370 454 131 216 5.31e-15 73.9
Msa0742520 MtrunA17_Chr2g0278121 26.797 459 268 13 12 452 9 417 2.56e-30 122
Msa0742520 MtrunA17_Chr6g0466481 27.632 456 235 17 14 454 3 378 2.78e-30 120
Msa0742520 MtrunA17_Chr6g0465671 27.632 456 235 17 14 454 3 378 4.09e-30 120
Msa0742520 MtrunA17_Chr3g0137721 27.669 459 249 15 11 452 3 395 1.08e-29 119
Msa0742520 MtrunA17_Chr8g0340611 43.791 153 75 6 19 162 10 160 1.78e-29 112
Msa0742520 MtrunA17_Chr6g0458601 26.742 445 253 15 14 452 59 436 3.51e-29 119
Msa0742520 MtrunA17_Chr8g0356821 50.000 146 63 6 198 337 1 142 1.19e-28 110
Msa0742520 MtrunA17_Chr8g0340521 44.512 164 78 6 2 161 32 186 1.49e-28 111
Msa0742520 MtrunA17_Chr7g0246351 25.926 459 242 17 19 452 6 391 5.26e-28 114
Msa0742520 MtrunA17_Chr8g0340581 46.667 150 67 7 19 161 16 159 8.78e-28 108
Msa0742520 MtrunA17_Chr5g0423901 27.679 448 241 16 18 454 8 383 2.17e-27 112
Msa0742520 MtrunA17_Chr7g0224001 26.444 450 248 17 19 454 14 394 3.10e-27 112
Msa0742520 MtrunA17_Chr3g0114151 25.618 445 264 18 18 454 23 408 4.60e-27 112
Msa0742520 MtrunA17_Chr5g0419701 27.252 444 250 16 20 452 5 386 5.08e-27 112
Msa0742520 MtrunA17_Chr1g0166251 26.517 445 250 17 18 454 10 385 1.86e-26 110
Msa0742520 MtrunA17_Chr2g0297931 25.764 458 268 17 7 453 2 398 3.87e-26 109
Msa0742520 MtrunA17_Chr3g0137681 26.304 460 240 16 11 452 2 380 6.14e-26 108
Msa0742520 MtrunA17_Chr7g0227851 27.152 453 234 20 17 454 9 380 1.38e-25 107
Msa0742520 MtrunA17_Chr2g0278791 25.000 452 238 16 18 452 1 368 2.86e-25 107
Msa0742520 MtrunA17_Chr7g0262091 25.934 455 238 19 18 454 17 390 3.03e-25 107
Msa0742520 MtrunA17_Chr3g0137701 26.667 450 248 16 17 452 7 388 3.52e-25 107
Msa0742520 MtrunA17_Chr6g0465731 28.200 461 224 20 14 452 3 378 3.71e-25 106
Msa0742520 MtrunA17_Chr4g0011351 39.548 177 82 7 6 161 4 176 1.07e-24 101
Msa0742520 MtrunA17_Chr3g0138571 27.152 453 234 15 19 454 13 386 1.48e-24 104
Msa0742520 MtrunA17_Chr4g0027471 28.540 452 247 20 15 410 5 436 3.18e-24 104
Msa0742520 MtrunA17_Chr1g0208801 27.876 452 234 20 18 452 7 383 3.81e-24 103
Msa0742520 MtrunA17_Chr3g0138371 25.771 454 240 17 16 454 17 388 4.30e-24 103
Msa0742520 MtrunA17_Chr7g0262121 24.946 465 266 15 1 455 2 393 1.43e-23 102
Msa0742520 MtrunA17_Chr5g0431711 26.098 410 226 16 18 425 10 344 2.69e-23 101
Msa0742520 MtrunA17_Chr4g0027431 28.873 426 253 18 15 417 5 403 3.53e-23 101
Msa0742520 MtrunA17_Chr4g0063321 40.609 197 105 9 79 268 6 197 3.56e-23 96.7
Msa0742520 MtrunA17_Chr2g0321161 39.597 149 83 3 309 454 10 154 6.26e-23 95.1
Msa0742520 MtrunA17_Chr6g0471031 24.499 449 264 16 18 454 60 445 6.40e-23 100
Msa0742520 MtrunA17_Chr4g0027441 28.767 438 260 18 12 425 2 411 2.33e-22 99.4
Msa0742520 MtrunA17_Chr1g0193401 27.152 453 239 19 19 454 179 557 2.51e-22 99.8
Msa0742520 MtrunA17_Chr4g0041631 26.226 469 293 18 16 454 18 463 3.29e-22 99.0
Msa0742520 MtrunA17_Chr3g0093361 24.943 441 245 13 19 454 43 402 7.31e-22 97.1
Msa0742520 MtrunA17_Chr5g0423851 27.455 448 234 15 18 454 7 374 7.44e-22 97.1
Msa0742520 MtrunA17_Chr4g0027411 25.532 470 286 15 15 433 5 461 1.13e-21 97.4
Msa0742520 MtrunA17_Chr5g0395311 25.393 445 252 18 21 452 28 405 1.58e-21 96.7
Msa0742520 MtrunA17_Chr5g0396401 25.442 452 244 16 16 454 5 376 1.89e-20 92.8
Msa0742520 MtrunA17_Chr7g0227641 26.517 445 231 20 17 454 9 364 5.08e-20 91.3
Msa0742520 MtrunA17_Chr3g0139601 26.626 492 277 18 19 454 13 476 1.79e-19 90.9
Msa0742520 MtrunA17_Chr4g0041581 25.828 453 297 17 19 455 23 452 3.21e-19 89.7
Msa0742520 MtrunA17_Chr2g0278091 24.508 457 233 18 18 455 11 374 3.30e-19 89.0
Msa0742520 MtrunA17_Chr4g0049751 30.636 346 188 16 5 327 1 317 3.62e-19 89.4
Msa0742520 MtrunA17_Chr5g0431691 25.837 418 230 15 16 425 2 347 3.89e-19 89.0
Msa0742520 MtrunA17_Chr3g0096461 26.695 472 288 16 15 454 19 464 8.07e-19 89.0
Msa0742520 MtrunA17_Chr5g0419431 25.758 462 248 19 9 452 4 388 1.32e-18 87.4
Msa0742520 MtrunA17_Chr4g0027461 28.614 339 182 14 15 312 5 324 1.38e-18 86.7
Msa0742520 MtrunA17_Chr3g0107721 25.109 458 280 16 19 454 3 419 2.56e-18 86.7
Msa0742520 MtrunA17_Chr3g0087391 24.684 474 217 21 19 452 19 392 3.63e-18 86.3
Msa0742520 MtrunA17_Chr1g0164901 30.411 365 210 16 17 358 7 350 3.99e-18 85.9
Msa0742520 MtrunA17_Chr7g0226481 29.150 247 139 8 18 260 10 224 6.39e-18 84.7
Msa0742520 MtrunA17_Chr2g0321151 39.456 147 71 5 47 187 3 137 4.53e-17 79.0
Msa0742520 MtrunA17_Chr7g0231691 31.227 269 161 8 177 429 144 404 8.04e-17 82.4
Msa0742520 MtrunA17_Chr4g0027231 28.017 464 260 22 15 425 96 538 8.79e-17 82.8
Msa0742520 MtrunA17_Chr7g0235821 24.215 446 251 15 19 454 5 373 1.22e-16 81.3
Msa0742520 MtrunA17_Chr2g0278801 27.881 269 138 10 18 262 1 237 5.02e-16 77.4
Msa0742520 MtrunA17_Chr2g0277281 30.435 207 126 6 18 214 10 208 5.75e-16 79.7
Msa0742520 MtrunA17_Chr4g0041601 25.424 472 294 20 19 455 19 467 8.38e-16 79.7
Msa0742520 MtrunA17_Chr7g0227771 27.570 214 140 6 19 231 4 203 1.18e-15 75.5
Msa0742520 MtrunA17_Chr2g0314171 25.740 439 263 19 14 423 36 440 1.43e-15 79.0
Msa0742520 MtrunA17_Chr8g0358761 55.738 61 26 1 8 68 2 61 4.20e-15 70.1
Msa0742520 MtrunA17_Chr4g0019511 24.728 368 198 14 103 454 13 317 4.21e-15 76.3
Msa0742520 MtrunA17_Chr7g0235851 23.991 446 252 16 19 454 5 373 4.71e-15 76.6
Msa0742520 MtrunA17_Chr7g0236211 31.754 211 128 9 9 216 2 199 4.82e-15 76.6
Msa0742520 MtrunA17_Chr6g0458501 24.838 463 249 18 6 454 30 407 5.97e-15 76.6
Msa0742520 MtrunA17_Chr7g0235431 27.333 450 229 18 14 454 13 373 1.05e-14 75.5
Msa0742520 MtrunA17_Chr3g0086141 33.824 204 113 9 19 214 3 192 1.84e-14 72.4
Msa0742520 MtrunA17_Chr3g0091171 27.041 196 129 5 19 212 5 188 2.54e-14 74.3
Msa0742520 MtrunA17_Chr7g0238361 25.776 419 233 17 19 423 3 357 4.11e-14 73.9
Msa0742520 MtrunA17_Chr5g0420741 31.443 194 117 6 21 212 20 199 4.90e-14 72.4
Msa0742520 MtrunA17_Chr7g0222771 27.245 323 176 11 16 308 21 314 5.05e-14 73.2
Msa0742520 MtrunA17_Chr7g0227651 32.524 206 112 8 18 214 10 197 1.05e-13 72.4
Msa0742520 MtrunA17_Chr2g0303241 25.874 429 258 19 17 426 19 406 1.21e-13 72.8
Msa0742520 MtrunA17_Chr7g0227821 31.343 201 118 8 17 212 9 194 1.48e-13 70.1
Msa0742520 MtrunA17_Chr4g0049111 26.368 402 256 15 9 392 33 412 1.65e-13 72.4
Msa0742520 MtrunA17_Chr8g0340541 44.595 74 39 1 383 454 30 103 1.68e-13 66.6
Msa0742520 MtrunA17_Chr7g0215541 24.894 470 212 21 1 455 1 344 1.79e-13 71.6
Msa0742520 MtrunA17_Chr2g0325431 24.783 460 286 18 15 454 15 434 1.85e-13 72.0
Msa0742520 MtrunA17_Chr7g0235361 30.476 210 125 9 7 211 28 221 2.62e-13 71.2
Msa0742520 MtrunA17_Chr5g0438051 28.910 211 128 6 19 214 6 209 4.97e-13 70.5
Msa0742520 MtrunA17_Chr0c09g0493551 31.707 205 116 7 14 212 3 189 5.05e-13 69.7
Msa0742520 MtrunA17_Chr8g0340531 42.400 125 64 5 197 317 5 125 6.64e-13 65.9
Msa0742520 MtrunA17_Chr7g0251931 31.481 162 94 4 300 454 45 196 7.76e-13 67.4
Msa0742520 MtrunA17_Chr1g0154471 26.681 476 249 24 15 454 13 424 8.47e-13 70.1
Msa0742520 MtrunA17_Chr5g0416781 24.123 456 308 16 19 454 19 456 1.16e-12 69.7
Msa0742520 MtrunA17_Chr6g0457681 31.492 181 96 9 1 165 36 204 1.35e-12 69.3
Msa0742520 MtrunA17_Chr7g0231671 24.726 457 304 16 19 454 19 456 1.47e-12 69.3
Msa0742520 MtrunA17_Chr3g0091161 29.699 266 163 10 5 263 1 249 1.47e-12 68.9
Msa0742520 MtrunA17_Chr1g0150231 24.348 460 282 16 19 455 25 441 3.45e-12 68.2
Msa0742520 MtrunA17_Chr1g0167231 35.036 137 76 4 327 454 2 134 4.64e-12 63.5
Msa0742520 MtrunA17_Chr7g0235841 34.586 133 78 3 325 452 23 151 6.06e-12 63.9
Msa0742520 MtrunA17_Chr6g0467501 31.390 223 115 11 18 213 210 421 6.91e-12 67.8
Msa0742520 MtrunA17_Chr4g0023251 30.049 203 127 8 18 214 1 194 7.04e-12 66.2
Msa0742520 MtrunA17_Chr8g0340571 43.373 83 44 2 365 445 14 95 7.93e-12 61.6
Msa0742520 MtrunA17_Chr5g0399361 28.436 211 119 9 267 454 27 228 8.40e-12 64.7
Msa0742520 MtrunA17_Chr2g0330751 28.782 271 166 12 16 271 39 297 8.43e-12 67.4
Msa0742520 MtrunA17_Chr7g0227631 26.230 366 192 18 100 454 10 308 9.91e-12 65.9
Msa0742520 MtrunA17_Chr3g0086041 28.708 209 129 9 8 212 15 207 9.92e-12 66.6
Msa0742520 MtrunA17_Chr5g0419561 29.798 198 120 8 18 212 11 192 1.20e-11 66.2
Msa0742520 MtrunA17_Chr2g0278101 27.206 272 145 11 18 262 11 256 1.28e-11 65.5
Msa0742520 MtrunA17_Chr3g0080241 33.582 134 74 5 325 450 12 138 1.36e-11 62.8
Msa0742520 MtrunA17_Chr7g0236151 30.928 194 93 8 19 211 9 162 1.55e-11 65.5
Msa0742520 MtrunA17_Chr7g0236191 30.928 194 93 8 19 211 9 162 1.55e-11 65.5
Msa0742520 MtrunA17_Chr3g0124051 28.667 300 161 11 201 454 3 295 1.60e-11 65.1
Msa0742520 MtrunA17_Chr1g0148661 28.692 237 148 11 12 247 11 227 1.60e-11 65.1
Msa0742520 MtrunA17_Chr4g0023311 22.340 470 289 17 18 425 31 486 1.80e-11 66.2
Msa0742520 MtrunA17_Chr5g0416541 25.253 396 237 17 13 387 14 371 1.92e-11 65.5
Msa0742520 MtrunA17_Chr1g0181881 26.374 182 109 6 1 177 1 162 2.52e-11 62.0
Msa0742520 MtrunA17_Chr2g0330731 27.344 256 167 12 5 252 57 301 3.77e-11 65.1
Msa0742520 MtrunA17_Chr4g0049071 25.895 363 206 13 3 335 34 363 4.31e-11 64.7
Msa0742520 MtrunA17_Chr3g0136291 26.154 195 129 6 18 211 13 193 5.00e-11 63.9
Msa0742520 MtrunA17_Chr3g0085961 25.455 330 215 11 5 322 1 311 5.14e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742520 AT4G26340.1 29.139 453 270 19 18 454 1 418 3.26e-34 133
Msa0742520 AT5G53840.1 27.115 461 296 17 8 455 7 440 5.20e-34 132
Msa0742520 AT1G16930.2 28.879 464 268 20 19 452 15 446 2.95e-33 130
Msa0742520 AT1G16930.1 28.879 464 268 20 19 452 15 446 2.95e-33 130
Msa0742520 AT1G16930.3 28.879 464 268 20 19 452 15 446 2.95e-33 130
Msa0742520 AT5G53635.1 27.333 450 285 13 21 454 2 425 5.12e-33 129
Msa0742520 AT5G56420.1 26.770 452 279 17 19 454 6 421 3.36e-32 127
Msa0742520 AT5G56420.2 26.770 452 279 17 19 454 6 421 3.36e-32 127
Msa0742520 AT5G56420.3 26.770 452 279 17 19 454 6 421 3.36e-32 127
Msa0742520 AT5G56440.1 28.821 458 265 19 18 450 1 422 2.48e-31 125
Msa0742520 AT4G00315.1 27.473 455 299 15 18 455 1 441 3.21e-31 125
Msa0742520 AT1G66310.1 27.409 467 296 16 1 452 1 439 4.76e-31 124
Msa0742520 AT4G13965.1 31.544 447 261 19 17 452 8 420 1.01e-30 123
Msa0742520 AT4G00160.1 30.853 457 264 26 19 454 16 441 1.23e-30 123
Msa0742520 AT4G13985.1 26.261 476 307 20 1 452 1 456 2.03e-30 123
Msa0742520 AT1G78750.2 27.696 473 294 17 6 452 5 455 2.71e-30 122
Msa0742520 AT1G78750.1 27.696 473 294 17 6 452 5 455 2.71e-30 122
Msa0742520 AT5G60610.2 29.454 421 249 17 18 425 1 386 3.38e-30 121
Msa0742520 AT5G60610.1 29.454 421 249 17 18 425 1 386 3.38e-30 121
Msa0742520 AT1G06630.2 28.691 359 234 11 19 367 12 358 2.36e-29 119
Msa0742520 AT1G06630.6 28.691 359 234 11 19 367 12 358 2.36e-29 119
Msa0742520 AT1G06630.4 28.691 359 234 11 19 367 12 358 2.36e-29 119
Msa0742520 AT1G06630.3 28.691 359 234 11 19 367 12 358 2.36e-29 119
Msa0742520 AT5G56820.1 30.222 450 257 19 19 452 15 423 2.74e-29 119
Msa0742520 AT1G51370.1 27.171 449 277 16 19 452 19 432 3.27e-29 119
Msa0742520 AT5G56560.2 27.655 452 270 14 20 454 6 417 3.56e-29 119
Msa0742520 AT1G06630.9 28.691 359 234 11 19 367 21 367 3.70e-29 119
Msa0742520 AT1G13780.1 27.253 466 284 16 19 452 10 452 3.87e-29 119
Msa0742520 AT5G44950.1 28.326 466 268 22 19 452 4 435 4.04e-29 119
Msa0742520 AT1G55660.1 26.535 456 302 14 18 455 52 492 5.72e-29 119
Msa0742520 AT1G06630.5 29.060 351 227 11 19 359 12 350 5.81e-29 117
Msa0742520 AT1G06630.8 29.060 351 227 11 19 359 12 350 5.81e-29 117
Msa0742520 AT1G06630.1 28.691 359 234 11 19 367 12 358 8.50e-29 118
Msa0742520 AT2G26030.3 28.785 469 265 24 19 452 4 438 1.42e-28 117
Msa0742520 AT2G26030.1 28.785 469 265 24 19 452 4 438 1.42e-28 117
Msa0742520 AT2G26030.4 28.205 468 274 22 19 452 4 443 1.96e-28 117
Msa0742520 AT1G06630.7 30.201 298 192 9 19 312 12 297 2.11e-28 114
Msa0742520 AT2G04230.1 28.791 455 264 18 13 445 7 423 2.62e-28 117
Msa0742520 AT1G69630.1 27.195 467 277 19 16 452 15 448 6.20e-28 115
Msa0742520 AT5G22730.1 26.708 483 294 20 1 452 10 463 6.38e-28 115
Msa0742520 AT5G22730.3 26.708 483 294 20 1 452 10 463 6.38e-28 115
Msa0742520 AT5G22670.1 25.708 459 286 13 19 452 11 439 1.18e-27 115
Msa0742520 AT4G10400.2 25.056 443 291 15 18 454 1 408 1.57e-27 114
Msa0742520 AT4G10400.3 25.056 443 291 15 18 454 1 408 1.57e-27 114
Msa0742520 AT4G10400.1 25.056 443 291 15 18 454 1 408 1.57e-27 114
Msa0742520 AT5G27750.1 27.137 468 289 17 19 452 5 454 1.71e-27 114
Msa0742520 AT1G66300.1 27.609 460 276 21 17 452 27 453 4.54e-27 113
Msa0742520 AT5G22610.2 26.327 471 287 17 19 453 18 464 4.67e-27 114
Msa0742520 AT5G22700.2 26.757 441 267 15 19 433 6 416 6.21e-27 112
Msa0742520 AT5G22700.3 26.757 441 267 15 19 433 6 416 6.21e-27 112
Msa0742520 AT5G22700.1 26.757 441 267 15 19 433 6 416 6.21e-27 112
Msa0742520 AT5G22700.4 26.757 441 267 15 19 433 6 416 6.21e-27 112
Msa0742520 AT5G22700.5 26.757 441 267 15 19 433 43 453 7.87e-27 112
Msa0742520 AT5G44980.2 27.766 461 281 20 17 454 2 433 1.68e-26 111
Msa0742520 AT5G44980.1 27.766 461 281 20 17 454 2 433 1.68e-26 111
Msa0742520 AT3G50710.1 27.489 462 270 22 18 452 1 424 1.80e-26 111
Msa0742520 AT3G49030.1 28.416 461 266 21 19 455 21 441 3.04e-26 110
Msa0742520 AT5G56380.2 27.389 471 277 22 18 455 1 439 3.46e-26 110
Msa0742520 AT5G56380.1 27.389 471 277 22 18 455 1 439 3.46e-26 110
Msa0742520 AT5G56400.1 28.035 453 282 14 17 454 31 454 3.79e-26 110
Msa0742520 AT1G22000.1 26.882 465 263 18 20 452 30 449 4.69e-26 110
Msa0742520 AT1G78760.1 25.159 473 300 18 1 452 1 440 5.50e-26 110
Msa0742520 AT5G22610.1 26.201 458 274 17 19 453 18 434 6.94e-26 110
Msa0742520 AT1G32375.2 26.444 450 289 15 18 454 1 421 1.14e-25 108
Msa0742520 AT1G32375.1 26.444 450 289 15 18 454 1 421 1.14e-25 108
Msa0742520 AT5G22720.1 26.850 473 278 20 19 454 23 464 1.47e-25 109
Msa0742520 AT5G38570.1 26.457 446 248 16 18 454 1 375 2.07e-25 107
Msa0742520 AT3G52680.1 29.167 480 280 20 1 455 1 445 2.16e-25 108
Msa0742520 AT5G22660.2 25.641 468 277 17 19 452 13 443 3.29e-25 107
Msa0742520 AT2G26860.1 27.040 429 267 17 18 429 1 400 1.03e-24 105
Msa0742520 AT2G26860.2 27.040 429 267 17 18 429 1 400 1.03e-24 105
Msa0742520 AT1G80470.1 25.214 468 296 20 5 452 1 434 1.51e-24 106
Msa0742520 AT5G44960.1 24.670 454 287 16 16 454 2 415 5.76e-24 103
Msa0742520 AT3G59200.2 30.811 370 213 14 19 359 7 362 7.39e-24 102
Msa0742520 AT5G56370.1 26.144 459 278 16 18 454 1 420 1.52e-23 102
Msa0742520 AT5G56370.2 26.144 459 278 16 18 454 1 420 1.52e-23 102
Msa0742520 AT1G51370.3 26.126 444 266 16 19 452 19 410 1.67e-23 102
Msa0742520 AT3G58900.4 27.149 442 269 17 18 425 1 423 1.74e-23 103
Msa0742520 AT3G59200.1 28.964 473 281 19 19 453 7 462 3.15e-23 102
Msa0742520 AT4G10420.1 28.981 314 200 11 146 454 26 321 4.05e-23 100
Msa0742520 AT1G05080.1 26.269 453 292 16 19 455 13 439 5.17e-23 101
Msa0742520 AT5G27750.2 28.108 370 226 12 19 359 5 363 5.23e-23 100
Msa0742520 AT3G49030.2 27.333 450 259 19 19 455 21 415 5.65e-23 100
Msa0742520 AT5G56810.1 29.299 471 273 21 7 454 2 435 5.98e-23 101
Msa0742520 AT1G78730.1 25.720 486 258 21 1 452 1 417 6.88e-23 100
Msa0742520 AT3G58980.1 27.215 474 277 20 18 455 1 442 9.18e-23 101
Msa0742520 AT1G66290.1 25.800 469 289 22 7 452 18 450 1.97e-22 99.8
Msa0742520 AT5G38590.2 26.037 434 286 14 18 446 1 404 2.55e-22 99.0
Msa0742520 AT3G49020.1 27.815 453 282 17 19 455 22 445 2.68e-22 99.4
Msa0742520 AT3G44810.1 31.366 322 205 9 21 333 9 323 4.00e-22 99.0
Msa0742520 AT1G13780.2 28.443 334 195 12 19 324 10 327 5.90e-22 97.1
Msa0742520 AT5G22700.6 25.581 430 245 15 19 433 43 412 8.50e-22 97.8
Msa0742520 AT3G60040.4 27.273 363 231 11 19 360 13 363 1.08e-21 98.6
Msa0742520 AT3G60040.2 27.348 362 230 11 19 359 232 581 2.09e-21 97.8
Msa0742520 AT3G60040.5 27.348 362 230 11 19 359 230 579 2.22e-21 97.8
Msa0742520 AT3G60040.1 27.348 362 230 11 19 359 232 581 2.42e-21 97.8
Msa0742520 AT3G60040.3 27.348 362 230 11 19 359 233 582 2.56e-21 97.8
Msa0742520 AT5G62970.1 26.004 473 291 20 18 455 1 449 3.32e-21 96.3
Msa0742520 AT3G42770.1 26.058 449 290 15 21 453 1 423 4.36e-21 96.3
Msa0742520 AT5G56700.2 26.359 368 249 10 73 434 8 359 5.69e-21 94.4
Msa0742520 AT3G51530.1 27.546 432 267 17 4 421 12 411 9.03e-21 94.7
Msa0742520 AT4G15060.2 26.995 426 254 19 4 410 11 398 9.42e-21 94.7
Msa0742520 AT3G26920.3 29.070 344 211 14 124 454 16 339 9.80e-21 93.6
Msa0742520 AT3G26920.1 29.070 344 211 14 124 454 16 339 9.80e-21 93.6
Msa0742520 AT5G18780.2 25.664 452 294 16 19 452 11 438 1.24e-20 94.4
Msa0742520 AT5G18780.1 25.664 452 294 16 19 452 11 438 1.24e-20 94.4
Msa0742520 AT3G58860.1 26.233 446 294 16 14 442 2 429 1.40e-20 94.4
Msa0742520 AT2G42720.1 25.546 458 301 14 18 453 1 440 1.55e-20 94.0
Msa0742520 AT4G09920.1 26.421 299 193 10 18 310 1 278 2.43e-20 92.0
Msa0742520 AT4G09920.5 26.421 299 193 10 18 310 1 278 2.43e-20 92.0
Msa0742520 AT3G44060.1 24.554 448 298 14 21 453 1 423 2.94e-20 93.2
Msa0742520 AT1G16940.1 24.944 445 276 16 21 452 13 412 3.72e-20 92.8
Msa0742520 AT5G56410.1 26.437 435 268 20 18 425 1 410 4.50e-20 93.2
Msa0742520 AT1G66320.1 24.628 471 296 16 7 452 18 454 4.88e-20 92.8
Msa0742520 AT4G09920.2 26.421 299 193 10 18 310 1 278 5.50e-20 90.5
Msa0742520 AT4G09920.4 26.421 299 193 10 18 310 1 278 5.50e-20 90.5
Msa0742520 AT4G09920.3 26.421 299 193 10 18 310 1 278 5.50e-20 90.5
Msa0742520 AT3G59240.1 27.975 479 279 26 16 453 2 455 5.73e-20 92.8
Msa0742520 AT5G56390.1 26.211 454 288 15 18 454 1 424 7.14e-20 92.0
Msa0742520 AT5G18770.1 27.074 458 286 20 19 451 24 458 8.66e-20 92.0
Msa0742520 AT3G26922.1 29.831 295 180 11 19 308 14 286 1.18e-19 89.7
Msa0742520 AT3G26922.2 29.831 295 180 11 19 308 14 286 1.18e-19 89.7
Msa0742520 AT5G56690.1 27.488 422 263 19 21 425 4 399 1.44e-19 90.9
Msa0742520 AT1G55030.2 27.876 452 271 20 19 454 19 431 2.59e-19 90.5
Msa0742520 AT1G55030.1 27.876 452 271 20 19 454 9 421 2.79e-19 90.1
Msa0742520 AT1G55660.2 30.081 246 158 8 18 259 52 287 2.87e-19 89.4
Msa0742520 AT4G15060.1 29.221 308 181 13 17 308 170 456 4.24e-19 90.5
Msa0742520 AT4G26350.1 25.424 472 272 19 18 454 1 427 6.77e-19 89.0
Msa0742520 AT5G41840.1 27.441 379 228 15 19 359 14 383 1.12e-18 89.0
Msa0742520 AT3G58900.3 30.357 280 166 11 18 284 1 264 1.29e-18 86.7
Msa0742520 AT3G58900.2 30.357 280 166 11 18 284 1 264 1.33e-18 87.0
Msa0742520 AT3G58900.1 30.357 280 166 11 18 284 1 264 1.33e-18 87.0
Msa0742520 AT3G26930.2 28.200 461 269 20 19 455 21 443 1.36e-18 88.2
Msa0742520 AT1G51370.2 26.722 363 218 14 19 368 19 346 1.43e-18 87.0
Msa0742520 AT5G44940.1 23.312 459 244 20 16 452 2 374 1.54e-18 87.4
Msa0742520 AT3G49480.2 24.444 450 270 17 19 435 12 424 1.69e-18 88.2
Msa0742520 AT3G58880.1 26.340 429 282 12 18 425 2 417 2.05e-18 87.8
Msa0742520 AT3G62430.1 26.496 468 281 21 18 454 1 436 2.90e-18 87.0
Msa0742520 AT5G25850.1 26.639 488 272 18 18 451 19 474 3.06e-18 87.4
Msa0742520 AT1G78840.1 23.871 465 298 15 16 455 2 435 7.24e-18 85.9
Msa0742520 AT1G78840.2 23.871 465 298 15 16 455 2 435 7.24e-18 85.9
Msa0742520 AT3G58920.1 26.016 492 286 21 18 455 1 468 7.94e-18 86.3
Msa0742520 AT4G14103.3 32.601 273 158 14 19 281 8 264 1.15e-17 85.1
Msa0742520 AT4G14103.1 32.601 273 158 14 19 281 8 264 1.15e-17 85.1
Msa0742520 AT4G14103.2 32.601 273 158 14 19 281 8 264 1.59e-17 85.1
Msa0742520 AT4G14096.2 28.075 374 210 16 19 381 8 333 2.95e-17 84.3
Msa0742520 AT4G14096.1 28.075 374 210 16 19 381 8 333 2.95e-17 84.3
Msa0742520 AT3G58930.3 24.268 478 312 16 18 454 1 469 3.44e-17 84.3
Msa0742520 AT3G58930.1 24.268 478 312 16 18 454 1 469 3.44e-17 84.3
Msa0742520 AT3G58930.5 24.268 478 312 16 18 454 1 469 3.44e-17 84.3
Msa0742520 AT3G52680.2 32.075 265 153 11 1 255 1 248 4.69e-17 82.8
Msa0742520 AT5G44850.1 24.806 387 219 16 73 452 7 328 4.85e-17 82.4
Msa0742520 AT5G38590.1 26.599 297 192 11 18 310 1 275 5.01e-17 81.6
Msa0742520 AT5G02700.1 27.157 394 224 15 16 383 24 380 8.55e-17 82.8
Msa0742520 AT5G22730.2 26.546 388 233 18 1 359 10 374 8.92e-17 82.4
Msa0742520 AT3G26922.4 29.054 296 156 12 19 308 14 261 1.17e-16 80.5
Msa0742520 AT3G54910.3 26.790 377 247 13 84 454 19 372 1.19e-16 81.6
Msa0742520 AT3G54910.1 26.790 377 247 13 84 454 19 372 1.19e-16 81.6
Msa0742520 AT3G54910.2 26.790 377 247 13 84 454 19 372 1.19e-16 81.6
Msa0742520 AT5G25860.1 26.975 367 228 14 19 359 12 364 1.41e-16 82.0
Msa0742520 AT5G56370.3 26.875 320 189 11 18 315 1 297 1.55e-16 80.9
Msa0742520 AT2G42730.1 25.000 456 310 17 19 453 5 449 2.42e-16 81.6
Msa0742520 AT1G60400.1 26.126 333 201 15 18 330 13 320 3.28e-16 80.9
Msa0742520 AT3G62440.1 25.417 480 284 21 18 451 1 452 3.42e-16 80.9
Msa0742520 AT1G66300.2 24.130 460 246 20 17 452 27 407 5.85e-16 80.1
Msa0742520 AT5G56560.1 29.010 293 167 10 179 454 338 606 7.02e-16 80.5
Msa0742520 AT5G56560.1 27.326 344 185 12 20 362 6 285 8.08e-12 67.8
Msa0742520 AT4G13960.2 26.796 362 232 12 18 359 1 349 7.82e-16 80.1
Msa0742520 AT4G13960.1 26.796 362 232 12 18 359 1 349 7.82e-16 80.1
Msa0742520 AT5G56810.2 31.818 264 148 11 7 257 2 246 8.99e-16 78.2
Msa0742520 AT3G28410.1 26.633 398 229 16 16 383 25 389 1.14e-15 79.3
Msa0742520 AT5G18770.2 28.011 357 220 15 19 356 24 362 1.22e-15 79.0
Msa0742520 AT4G22280.1 25.442 452 282 19 18 454 1 412 1.24e-15 79.0
Msa0742520 AT5G41830.2 28.686 373 228 15 15 359 9 371 1.65e-15 79.3
Msa0742520 AT4G27050.2 23.958 480 294 19 17 454 2 452 2.09e-15 78.6
Msa0742520 AT4G27050.3 23.958 480 294 19 17 454 2 452 2.09e-15 78.6
Msa0742520 AT4G27050.5 23.958 480 294 19 17 454 2 452 2.09e-15 78.6
Msa0742520 AT4G27050.4 23.958 480 294 19 17 454 2 452 2.09e-15 78.6
Msa0742520 AT4G27050.1 23.958 480 294 19 17 454 2 452 2.09e-15 78.6
Msa0742520 AT5G44980.3 27.508 309 187 14 17 306 2 292 2.45e-15 77.0
Msa0742520 AT5G44980.4 27.508 309 187 14 17 306 2 292 2.45e-15 77.0
Msa0742520 AT3G26920.2 27.381 336 188 14 124 454 16 300 2.56e-15 77.0
Msa0742520 AT3G26930.1 26.559 433 257 19 47 455 3 398 4.35e-15 77.4
Msa0742520 AT3G56780.2 22.800 500 280 15 21 452 9 470 4.36e-15 77.8
Msa0742520 AT5G50270.1 27.078 421 267 16 18 425 1 394 7.45e-15 76.6
Msa0742520 AT4G00320.1 28.021 389 210 20 15 359 9 371 1.10e-14 76.6
Msa0742520 AT5G22660.1 26.087 322 186 10 19 314 13 308 1.16e-14 75.1
Msa0742520 AT5G18780.3 26.075 372 238 14 19 376 11 359 1.32e-14 75.5
Msa0742520 AT5G18780.4 26.075 372 238 14 19 376 11 359 1.32e-14 75.5
Msa0742520 AT5G44970.1 25.938 320 203 14 123 423 46 350 1.35e-14 75.9
Msa0742520 AT5G02930.1 28.425 292 166 13 2 281 10 270 1.52e-14 75.9
Msa0742520 AT1G26890.1 25.682 440 250 14 2 406 21 418 1.72e-14 75.5
Msa0742520 AT3G59210.2 29.167 384 227 19 14 370 2 367 1.77e-14 75.9
Msa0742520 AT3G59210.1 29.167 384 227 19 14 370 2 367 1.77e-14 75.9
Msa0742520 AT3G59210.5 29.167 384 227 19 14 370 2 367 1.77e-14 75.9
Msa0742520 AT3G59210.4 29.167 384 227 19 14 370 2 367 1.77e-14 75.9
Msa0742520 AT3G59210.3 29.167 384 227 19 14 370 2 367 1.77e-14 75.9
Msa0742520 AT3G58940.1 24.824 427 277 13 18 425 1 402 1.92e-14 76.3
Msa0742520 AT3G58940.2 24.824 427 277 13 18 425 1 402 1.92e-14 76.3
Msa0742520 AT5G44490.2 23.427 461 299 20 19 452 17 450 2.21e-14 75.5
Msa0742520 AT5G44490.1 23.043 460 302 19 19 452 17 450 2.37e-14 75.5
Msa0742520 AT5G38390.1 27.027 444 254 19 18 425 1 410 2.75e-14 75.1
Msa0742520 AT3G26922.3 27.957 279 174 11 35 308 1 257 5.32e-14 72.8
Msa0742520 AT3G26922.5 27.957 279 174 11 35 308 1 257 5.32e-14 72.8
Msa0742520 AT3G59190.1 25.799 407 259 17 14 403 7 387 5.98e-14 73.6
Msa0742520 AT1G56610.2 30.901 233 139 6 24 251 15 230 7.58e-14 73.9
Msa0742520 AT5G56700.1 29.756 205 132 7 87 286 22 219 9.31e-14 72.0
Msa0742520 AT5G15620.1 25.105 474 283 24 18 455 1 438 9.36e-14 73.6
Msa0742520 AT3G59190.2 28.929 280 184 10 14 286 7 278 9.80e-14 73.6
Msa0742520 AT2G29930.3 24.947 473 292 21 19 454 12 458 1.12e-13 73.2
Msa0742520 AT2G29930.1 24.947 473 292 21 19 454 12 458 1.12e-13 73.2
Msa0742520 AT5G02920.1 27.126 247 149 8 19 259 28 249 1.20e-13 71.2
Msa0742520 AT1G56610.1 30.901 233 139 6 24 251 78 293 1.32e-13 73.2
Msa0742520 AT5G56325.1 25.940 266 174 9 199 454 11 263 1.35e-13 71.2
Msa0742520 AT4G22280.2 27.324 355 219 15 18 359 1 329 1.41e-13 72.0
Msa0742520 AT5G41630.1 30.000 200 127 6 19 211 12 205 2.58e-13 72.0
Msa0742520 AT1G48400.1 29.880 251 149 10 19 255 10 247 3.18e-13 72.0
Msa0742520 AT3G59160.1 26.463 393 232 16 14 359 8 390 3.56e-13 71.6
Msa0742520 AT1G48400.2 29.880 251 149 10 19 255 10 247 3.85e-13 71.6
Msa0742520 AT5G22600.2 26.331 338 199 12 148 453 1 320 4.43e-13 70.5
Msa0742520 AT5G22600.1 26.331 338 199 12 148 453 1 320 4.43e-13 70.5
Msa0742520 AT3G59000.1 23.950 476 307 19 18 454 1 460 5.30e-13 71.2
Msa0742520 AT2G26030.5 27.899 276 165 13 201 452 18 283 6.83e-13 69.3
Msa0742520 AT1G66640.1 24.823 423 253 16 51 452 35 413 7.15e-13 70.5
Msa0742520 AT3G03040.1 25.815 368 235 12 18 359 1 356 9.01e-13 70.5
Msa0742520 AT1G52650.1 23.270 477 301 19 18 454 1 452 2.13e-12 69.3
Msa0742520 AT1G49610.1 28.054 221 104 8 16 236 23 188 2.14e-12 68.6
Msa0742520 AT5G56570.1 22.126 461 308 17 3 454 20 438 5.57e-12 67.8
Msa0742520 AT5G56800.1 25.795 283 186 9 181 455 78 344 7.90e-12 67.0
Msa0742520 AT3G54160.1 23.919 393 262 17 84 453 46 424 1.23e-11 66.6
Msa0742520 AT1G58310.1 29.268 287 167 11 19 281 8 282 1.23e-11 67.0
Msa0742520 AT4G03220.1 23.340 497 301 22 18 455 23 498 1.75e-11 66.6
Msa0742520 AT3G52690.1 28.041 296 179 13 175 454 20 297 2.22e-11 65.1
Msa0742520 AT3G59180.1 27.190 331 197 16 84 388 38 350 2.50e-11 65.9
Msa0742520 AT3G49480.1 25.914 301 193 11 148 435 1 284 8.05e-11 63.5

Find 126 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTTGTTAACCACTTTAT+TGG 0.143333 5_1:+62458500 Msa0742520:three_prime_UTR
ACTACTAGACATGTATAATT+TGG 0.197938 5_1:+62454502 Msa0742520:CDS
GGTTCAACAGATTCACTTTC+AGG 0.208119 5_1:-62454797 None:intergenic
CTCGCAAATGGCGCAATATT+TGG 0.238835 5_1:+62453676 Msa0742520:CDS
GACTCCAGACCAACAATAAA+AGG 0.279633 5_1:-62458346 None:intergenic
TTACCGCCGCCGGCTTCAAC+AGG 0.285165 5_1:+62453949 Msa0742520:CDS
CGAAGTGTGGCCAAAGATTC+AGG 0.291932 5_1:-62454593 None:intergenic
TAAAGCAAGTGGCGAAATTC+AGG 0.293563 5_1:-62455016 None:intergenic
TGAATCTTTGGCCACACTTC+GGG 0.320102 5_1:+62454595 Msa0742520:CDS
AAATGGGATACAAGACATTT+AGG 0.331229 5_1:-62455269 None:intergenic
CTGTCCTGTTCTCGAAAATC+TGG 0.345977 5_1:+62454556 Msa0742520:CDS
ATTCATCACCTTCATATGAA+TGG 0.356856 5_1:+62455225 Msa0742520:CDS
TGTGGTACGAATGCAGGTTT+TGG 0.357467 5_1:-62453643 None:intergenic
GTCAATCGAGTGGTTATAGA+AGG 0.357684 5_1:-62453871 None:intergenic
GGCCTCCTTCTTCCAATGTC+GGG 0.367638 5_1:-62453508 None:intergenic
AACCACTTTATTGGAAATAC+AGG 0.371022 5_1:+62458509 Msa0742520:three_prime_UTR
GATGAAACTCCTCGAGGTTT+GGG 0.377236 5_1:-62453917 None:intergenic
AGATGAAACTCCTCGAGGTT+TGG 0.379740 5_1:-62453918 None:intergenic
GAAGGTCAATAAAGGTCAAA+TGG 0.381046 5_1:-62455286 None:intergenic
GTTATCGAATTCATAAATTA+CGG 0.385345 5_1:-62453739 None:intergenic
GGAGAGGATGTGATGTAGTA+AGG 0.386148 5_1:-62453610 None:intergenic
GGGCAAGAGAAGAGGGAAAC+AGG 0.388572 5_1:-62453975 None:intergenic
ATGTGATGTAGTAAGGAGTT+TGG 0.398364 5_1:-62453603 None:intergenic
TCCGCAAATCTCGCATTGTT+CGG 0.399549 5_1:+62453811 Msa0742520:CDS
GACTCTGCCGCCTCCGCCAT+CGG 0.401729 5_1:-62453540 None:intergenic
TCCGAACAATGCGAGATTTG+CGG 0.403727 5_1:-62453812 None:intergenic
AGCATCACGAAACGTGATAT+TGG 0.407324 5_1:-62454717 None:intergenic
CTCCTCGAGGTTTGGGCCAA+TGG 0.421806 5_1:-62453910 None:intergenic
AGTCTTCTCCGAGCTCTCTC+TGG 0.426037 5_1:+62454827 Msa0742520:CDS
CACCCCTCGTTTCTCGCAAA+TGG 0.426304 5_1:+62453664 Msa0742520:CDS
TCTGCAATTGCAAGACAATT+CGG 0.426595 5_1:+62454448 Msa0742520:CDS
TTTCGTGATGCTGCTTCTGT+TGG 0.427729 5_1:+62454728 Msa0742520:CDS
ACTTGCTTTATATAGAGCTT+TGG 0.428633 5_1:+62455029 Msa0742520:CDS
TTGGAAGAATCTCGAAGCCT+TGG 0.433104 5_1:+62453695 Msa0742520:CDS
TGACACGTGGCAGATGCCTT+TGG 0.439487 5_1:-62455446 None:intergenic
AATTTCCGAGATATTCTTGA+AGG 0.442176 5_1:-62455304 None:intergenic
TTAACAAATAATCAGATAGA+TGG 0.443857 5_1:-62458488 None:intergenic
TTCATCACCTTCATATGAAT+GGG 0.445404 5_1:+62455226 Msa0742520:CDS
TTATCGAATTCATAAATTAC+GGG 0.447046 5_1:-62453738 None:intergenic
GGATACTCCGATGGCGGAGG+CGG 0.450270 5_1:+62453533 Msa0742520:CDS
TGCCTGAGAGAGACAAGGTT+AGG 0.451617 5_1:-62453996 None:intergenic
TTCACTTCCCATTCATATGA+AGG 0.453446 5_1:-62455233 None:intergenic
TCAGCACGTTCACGTGGCTC+TGG 0.454535 5_1:+62458269 Msa0742520:three_prime_UTR
GTAGTAAGGAGTTTGGTAGT+TGG 0.454541 5_1:-62453596 None:intergenic
ATATTCTTGAAGGTCAATAA+AGG 0.454998 5_1:-62455294 None:intergenic
GCCCTAACCTTGTCTCTCTC+AGG 0.455076 5_1:+62453994 Msa0742520:CDS
CTGAATCTTTGGCCACACTT+CGG 0.455360 5_1:+62454594 Msa0742520:CDS
GATCAGGCGCGTCTATTTCA+AGG 0.461395 5_1:-62454676 None:intergenic
ATCAATGTTGAGAATGAGGT+TGG 0.461553 5_1:+62454647 Msa0742520:CDS
GACATTTGCAGTGTGCTTTG+CGG 0.462046 5_1:+62458191 Msa0742520:intron
TCTCGGAAATTTAAATGAGC+TGG 0.464659 5_1:+62455316 Msa0742520:CDS
TTCGTGATGCTGCTTCTGTT+GGG 0.465190 5_1:+62454729 Msa0742520:CDS
CGTTCACGTGGCTCTGGCCG+TGG 0.465821 5_1:+62458275 Msa0742520:three_prime_UTR
GTTTAATTCCAGAGAGAGCT+CGG 0.466178 5_1:-62454835 None:intergenic
GAAATAACTGAATGGGGACT+TGG 0.472171 5_1:-62458582 None:intergenic
TTCGTGATTAGTTAGTCTCA+TGG 0.474626 5_1:+62458317 Msa0742520:three_prime_UTR
TGGCCTCCTTCTTCCAATGT+CGG 0.475475 5_1:-62453509 None:intergenic
TCAATGTTGAGAATGAGGTT+GGG 0.476409 5_1:+62454648 Msa0742520:CDS
AACCTGTATTTCCAATAAAG+TGG 0.477096 5_1:-62458511 None:intergenic
ATTGACCTTCAAGAATATCT+CGG 0.477906 5_1:+62455299 Msa0742520:CDS
GGCAGATGCCTTTGGTAGAT+CGG 0.483284 5_1:-62455438 None:intergenic
TCTGTGAATGTCCTTCTCTC+TGG 0.486132 5_1:+62454533 Msa0742520:CDS
AAGGTCAATAAAGGTCAAAT+GGG 0.501175 5_1:-62455285 None:intergenic
CACCCTGTTGAAGCCGGCGG+CGG 0.502744 5_1:-62453952 None:intergenic
CAATGTTGAGAATGAGGTTG+GGG 0.505466 5_1:+62454649 Msa0742520:CDS
AACAGGCACCCTGTTGAAGC+CGG 0.507985 5_1:-62453958 None:intergenic
TTCACTAAGAAGAAGACGTT+GGG 0.508016 5_1:+62458215 Msa0742520:three_prime_UTR
GTTATGAGAGTTTGTAGCAC+AGG 0.517195 5_1:-62455100 None:intergenic
ACGTGATATTGGTGAGACTA+AGG 0.517984 5_1:-62454706 None:intergenic
AGACTAAGGTACTTGAGATC+AGG 0.518799 5_1:-62454692 None:intergenic
CTCCGCCATCGGAGTATCCA+TGG 0.520160 5_1:-62453529 None:intergenic
ACGTGGATCAATGCCGCCAT+TGG 0.525825 5_1:+62453894 Msa0742520:CDS
AATTCAGGAAAATCTAAGAC+AGG 0.526097 5_1:-62455001 None:intergenic
GCTCGGAGAAGACTGAGTAC+AGG 0.526432 5_1:-62454818 None:intergenic
GAATTCATAAATTACGGGGC+TGG 0.526816 5_1:-62453733 None:intergenic
GAGGGGTGTGGTACGAATGC+AGG 0.527172 5_1:-62453649 None:intergenic
TCTGTCAATGTCGTCATCGT+CGG 0.528078 5_1:-62453568 None:intergenic
CTCACTCTGCTTACCGCCGC+CGG 0.531519 5_1:+62453939 Msa0742520:CDS
AACAGATTCACTTTCAGGAG+TGG 0.531982 5_1:-62454792 None:intergenic
TAACAAATAATCAGATAGAT+GGG 0.540497 5_1:-62458487 None:intergenic
CACTGAGCTGCATCATCTCA+AGG 0.547168 5_1:+62455479 Msa0742520:exon
GTCAATGTCGTCATCGTCGG+AGG 0.548656 5_1:-62453565 None:intergenic
CACTCCCCGACATTGGAAGA+AGG 0.550649 5_1:+62453503 Msa0742520:five_prime_UTR
GCCTGAGAGAGACAAGGTTA+GGG 0.552761 5_1:-62453995 None:intergenic
GCGCCATTTGCGAGAAACGA+GGG 0.554555 5_1:-62453667 None:intergenic
GAACAGGACAGCCAGAGAGA+AGG 0.554699 5_1:-62454544 None:intergenic
AAGGTTAGGGCAAGAGAAGA+GGG 0.555833 5_1:-62453982 None:intergenic
GAGGACAGTGTTGACGAAAA+CGG 0.556678 5_1:-62453784 None:intergenic
CAAGGTTAGGGCAAGAGAAG+AGG 0.557826 5_1:-62453983 None:intergenic
TACCGCCGCCGGCTTCAACA+GGG 0.559701 5_1:+62453950 Msa0742520:CDS
CTCGAGGTTTGGGCCAATGG+CGG 0.559983 5_1:-62453907 None:intergenic
GAAGGTGATGAATCAAATGA+TGG 0.561486 5_1:-62455215 None:intergenic
CATGGATACTCCGATGGCGG+AGG 0.564213 5_1:+62453530 Msa0742520:exon
TGCGAGATTTGCGGAGAGTG+AGG 0.565813 5_1:-62453803 None:intergenic
TCTCATAACATTCAACTACA+AGG 0.568167 5_1:+62455114 Msa0742520:CDS
GCTGCTTAGTTTAACTACAA+AGG 0.572115 5_1:+62454865 Msa0742520:CDS
GCCTCCTTCTTCCAATGTCG+GGG 0.579676 5_1:-62453507 None:intergenic
AACAAACATAATAGCTGCCA+CGG 0.588532 5_1:-62458292 None:intergenic
TTTGCGAGAAACGAGGGGTG+TGG 0.589736 5_1:-62453661 None:intergenic
ACATTGGAAGAAGGAGGCCA+TGG 0.589874 5_1:+62453512 Msa0742520:exon
GGAACTGTCGCAGAAATCCA+AGG 0.603410 5_1:-62453712 None:intergenic
AAAGCTCTATATAAAGCAAG+TGG 0.607124 5_1:-62455027 None:intergenic
TGAAGATGACACCCGAAGTG+TGG 0.610539 5_1:-62454606 None:intergenic
TTCAGGAAAATCTAAGACAG+GGG 0.611075 5_1:-62454999 None:intergenic
GGAGGCCATGGATACTCCGA+TGG 0.617706 5_1:+62453524 Msa0742520:exon
AGAAGACGTTGGGAGCAAAA+CGG 0.618443 5_1:+62458225 Msa0742520:three_prime_UTR
TGTCATCTTCAACCTTGAAG+AGG 0.618499 5_1:+62454618 Msa0742520:CDS
GGCCATGGATACTCCGATGG+CGG 0.619860 5_1:+62453527 Msa0742520:exon
TGTTGGGAACTTGCACAATG+TGG 0.624137 5_1:+62454745 Msa0742520:CDS
CTTCACTAAGAAGAAGACGT+TGG 0.628875 5_1:+62458214 Msa0742520:three_prime_UTR
TGCGCCATTTGCGAGAAACG+AGG 0.635364 5_1:-62453668 None:intergenic
TTAATTTCAGCACGTTCACG+TGG 0.635504 5_1:+62458263 Msa0742520:three_prime_UTR
CGCCATTTGCGAGAAACGAG+GGG 0.635930 5_1:-62453666 None:intergenic
CGCCATTGGCCCAAACCTCG+AGG 0.640548 5_1:+62453908 Msa0742520:CDS
TCAATCGAGTGGTTATAGAA+GGG 0.641238 5_1:-62453870 None:intergenic
ATTCAGGAAAATCTAAGACA+GGG 0.645585 5_1:-62455000 None:intergenic
GAACGTGATAGCATGAGAGA+CGG 0.645881 5_1:-62453839 None:intergenic
AGGCACCCTGTTGAAGCCGG+CGG 0.664495 5_1:-62453955 None:intergenic
TGATCCACGTGTCAATCGAG+TGG 0.668936 5_1:-62453881 None:intergenic
AGTTGCAGCAACTTCAGTGA+CGG 0.673174 5_1:-62454482 None:intergenic
TATCGAATTCATAAATTACG+GGG 0.674759 5_1:-62453737 None:intergenic
TCCCCGACATTGGAAGAAGG+AGG 0.686621 5_1:+62453506 Msa0742520:five_prime_UTR
GTGAAATTTAACTTGACACG+TGG 0.694107 5_1:-62455459 None:intergenic
ATTGTTGCCTGAGAGAGACA+AGG 0.696101 5_1:-62454001 None:intergenic
ATAACCACTCGATTGACACG+TGG 0.713847 5_1:+62453877 Msa0742520:CDS
GAGTGAGATGAAACTCCTCG+AGG 0.759501 5_1:-62453923 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATTTTTTTTTTTAAAGA+AGG + chr5_1:62458533-62458552 Msa0742520:three_prime_UTR 10.0%
!! AAACAATATAGTTGAAAATT+TGG - chr5_1:62455604-62455623 None:intergenic 15.0%
!! AAATAAATTTAGATACTTTG+GGG - chr5_1:62455647-62455666 None:intergenic 15.0%
!! CAAATAAATTTAGATACTTT+GGG - chr5_1:62455648-62455667 None:intergenic 15.0%
!! ACAAATAAATTTAGATACTT+TGG - chr5_1:62455649-62455668 None:intergenic 15.0%
!! GTTTAGGAATTATAAATAAA+AGG - chr5_1:62455894-62455913 None:intergenic 15.0%
!!! TAAGTTACAATTTCTATTTT+TGG + chr5_1:62456287-62456306 Msa0742520:intron 15.0%
!! GTGAAATAGATTAAAAATTA+GGG + chr5_1:62457614-62457633 Msa0742520:intron 15.0%
!! ATCATATTTCAAATTTCATT+AGG - chr5_1:62458171-62458190 None:intergenic 15.0%
!! TTATCGAATTCATAAATTAC+GGG - chr5_1:62453741-62453760 None:intergenic 20.0%
!! GTTATCGAATTCATAAATTA+CGG - chr5_1:62453742-62453761 None:intergenic 20.0%
!! CGATAAAAAAACAAAAAGAA+AGG - chr5_1:62454036-62454055 None:intergenic 20.0%
!! ATTAACAGCTTATTTCAATA+GGG + chr5_1:62454281-62454300 Msa0742520:intron 20.0%
!!! ATTTTCAACTATATTGTTTG+TGG + chr5_1:62455605-62455624 Msa0742520:intron 20.0%
!! AATAAATTTAGATACTTTGG+GGG - chr5_1:62455646-62455665 None:intergenic 20.0%
!! TGTTCTCATAATTAAATCTA+AGG + chr5_1:62455677-62455696 Msa0742520:intron 20.0%
!! TTTATTAATGATACATCTCA+AGG - chr5_1:62455950-62455969 None:intergenic 20.0%
!! TTGGAATTTAGTTAGAATTA+AGG + chr5_1:62456091-62456110 Msa0742520:intron 20.0%
!! TGGAATTTAGTTAGAATTAA+GGG + chr5_1:62456092-62456111 Msa0742520:intron 20.0%
!!! ATACTCTATTTTTACTACTT+CGG - chr5_1:62457106-62457125 None:intergenic 20.0%
!!! GAAAGATGAAGTTTTAATAT+TGG - chr5_1:62457500-62457519 None:intergenic 20.0%
!!! GTTGTTATTGATTATAAGAA+CGG + chr5_1:62457592-62457611 Msa0742520:intron 20.0%
!! GGTGAAATAGATTAAAAATT+AGG + chr5_1:62457613-62457632 Msa0742520:intron 20.0%
!! AATTAGGGTTACATAAAATT+AGG + chr5_1:62457629-62457648 Msa0742520:intron 20.0%
!! ATTAGGGTTACATAAAATTA+GGG + chr5_1:62457630-62457649 Msa0742520:intron 20.0%
!! ATAGAGCATATAAAAAGAAA+TGG - chr5_1:62458401-62458420 None:intergenic 20.0%
!! TAACAAATAATCAGATAGAT+GGG - chr5_1:62458490-62458509 None:intergenic 20.0%
!! TTAACAAATAATCAGATAGA+TGG - chr5_1:62458491-62458510 None:intergenic 20.0%
!!! TTATTTGTTAACCACTTTAT+TGG + chr5_1:62458500-62458519 Msa0742520:three_prime_UTR 20.0%
!!! TTTTTTAAAGAAGGAAATAC+AGG + chr5_1:62458542-62458561 Msa0742520:three_prime_UTR 20.0%
! TATCGAATTCATAAATTACG+GGG - chr5_1:62453740-62453759 None:intergenic 25.0%
! AAACAAAAAGAAAGGATGAA+AGG - chr5_1:62454028-62454047 None:intergenic 25.0%
! TTCAAATTATTATCCCTGTT+GGG - chr5_1:62454153-62454172 None:intergenic 25.0%
! TTTCAAATTATTATCCCTGT+TGG - chr5_1:62454154-62454173 None:intergenic 25.0%
! CATTAACAGCTTATTTCAAT+AGG + chr5_1:62454280-62454299 Msa0742520:intron 25.0%
! ACTACTAGACATGTATAATT+TGG + chr5_1:62454502-62454521 Msa0742520:CDS 25.0%
!!! ATTGATTTTTAACCTCTTCA+AGG - chr5_1:62454633-62454652 None:intergenic 25.0%
! AAAAATCAATGTTGAGAATG+AGG + chr5_1:62454643-62454662 Msa0742520:CDS 25.0%
! AGATCCAAACAAAAAATACA+CGG - chr5_1:62455162-62455181 None:intergenic 25.0%
! ATATTCTTGAAGGTCAATAA+AGG - chr5_1:62455297-62455316 None:intergenic 25.0%
!!! AACTCTTACTTTATTTTACG+TGG + chr5_1:62455510-62455529 Msa0742520:intron 25.0%
! CAATATAGTTGAAAATTTGG+TGG - chr5_1:62455601-62455620 None:intergenic 25.0%
!!! TTTTCTTGCTATTCTATTCT+AGG + chr5_1:62456747-62456766 Msa0742520:intron 25.0%
!!! AACATAAAGTTCTAGGTTTA+AGG - chr5_1:62457293-62457312 None:intergenic 25.0%
! CAATAACAACTATTAATCGA+AGG - chr5_1:62457582-62457601 None:intergenic 25.0%
!! TAAAATTAGGGTTTAAAGCT+TGG + chr5_1:62457642-62457661 Msa0742520:intron 25.0%
!! AACAATTCATCTTTTGTTCT+TGG - chr5_1:62457836-62457855 None:intergenic 25.0%
! ATAATTAGTAGAAGCTGATT+CGG - chr5_1:62458099-62458118 None:intergenic 25.0%
! TTATTTGTAGTCTTTCTTGT+TGG + chr5_1:62458138-62458157 Msa0742520:intron 25.0%
! TATTTGTAGTCTTTCTTGTT+GGG + chr5_1:62458139-62458158 Msa0742520:intron 25.0%
ATCGTCAAATTCTCTATCAT+AGG + chr5_1:62454052-62454071 Msa0742520:intron 30.0%
TCGTCAAATTCTCTATCATA+GGG + chr5_1:62454053-62454072 Msa0742520:intron 30.0%
AGTCTATTCAAACATACAAC+TGG + chr5_1:62454100-62454119 Msa0742520:intron 30.0%
TCAAATTATTATCCCTGTTG+GGG - chr5_1:62454152-62454171 None:intergenic 30.0%
TTCATGACAACTTACTAATC+CGG - chr5_1:62454245-62454264 None:intergenic 30.0%
! ATTCAGGAAAATCTAAGACA+GGG - chr5_1:62455003-62455022 None:intergenic 30.0%
! AATTCAGGAAAATCTAAGAC+AGG - chr5_1:62455004-62455023 None:intergenic 30.0%
AAAGCTCTATATAAAGCAAG+TGG - chr5_1:62455030-62455049 None:intergenic 30.0%
ACTTGCTTTATATAGAGCTT+TGG + chr5_1:62455029-62455048 Msa0742520:CDS 30.0%
TCTCATAACATTCAACTACA+AGG + chr5_1:62455114-62455133 Msa0742520:CDS 30.0%
ATTCATCACCTTCATATGAA+TGG + chr5_1:62455225-62455244 Msa0742520:CDS 30.0%
TTCATCACCTTCATATGAAT+GGG + chr5_1:62455226-62455245 Msa0742520:CDS 30.0%
! AGACATTTAGGAACACTTTT+CGG - chr5_1:62455260-62455279 None:intergenic 30.0%
AAATGGGATACAAGACATTT+AGG - chr5_1:62455272-62455291 None:intergenic 30.0%
AAGGTCAATAAAGGTCAAAT+GGG - chr5_1:62455288-62455307 None:intergenic 30.0%
ATTGACCTTCAAGAATATCT+CGG + chr5_1:62455299-62455318 Msa0742520:CDS 30.0%
AATTTCCGAGATATTCTTGA+AGG - chr5_1:62455307-62455326 None:intergenic 30.0%
! ACAAGCTATGTTTTGCAAAA+TGG + chr5_1:62455344-62455363 Msa0742520:CDS 30.0%
TTCAACTATATTGTTTGTGG+TGG + chr5_1:62455608-62455627 Msa0742520:intron 30.0%
GCTAGTTAGAATATGAGTAA+TGG + chr5_1:62455764-62455783 Msa0742520:intron 30.0%
!! GAGTAATGGATAGTTAAGTT+TGG + chr5_1:62455778-62455797 Msa0742520:intron 30.0%
AATGGATAGTTAAGTTTGGA+TGG + chr5_1:62455782-62455801 Msa0742520:intron 30.0%
ATGGATAGTTAAGTTTGGAT+GGG + chr5_1:62455783-62455802 Msa0742520:intron 30.0%
! GAAAAGAATAAGAGTGTACT+GGG - chr5_1:62455869-62455888 None:intergenic 30.0%
! TGAAAAGAATAAGAGTGTAC+TGG - chr5_1:62455870-62455889 None:intergenic 30.0%
AACTACAACTCATTGAGTTT+AGG - chr5_1:62455910-62455929 None:intergenic 30.0%
ACTCCTAACATAGATTATCA+TGG + chr5_1:62456192-62456211 Msa0742520:intron 30.0%
CTCCTAACATAGATTATCAT+GGG + chr5_1:62456193-62456212 Msa0742520:intron 30.0%
TCCTAACATAGATTATCATG+GGG + chr5_1:62456194-62456213 Msa0742520:intron 30.0%
!!! CAATTTCTATTTTTGGCTGT+TGG + chr5_1:62456294-62456313 Msa0742520:intron 30.0%
GTAAGAACTAGAAGTTAGAA+TGG - chr5_1:62456421-62456440 None:intergenic 30.0%
AGAGATGATACAACTCATTA+TGG - chr5_1:62456445-62456464 None:intergenic 30.0%
TTGTTATAATGCCAATGACA+TGG - chr5_1:62456503-62456522 None:intergenic 30.0%
GCAAGTAAACATTGTTCTAT+TGG - chr5_1:62456624-62456643 None:intergenic 30.0%
TCAAATACATTGACAACACA+AGG - chr5_1:62456774-62456793 None:intergenic 30.0%
AATAACTGGTTAAGGTAAGT+AGG + chr5_1:62456910-62456929 Msa0742520:intron 30.0%
GACATTTCACATTTGTGTTA+AGG + chr5_1:62456948-62456967 Msa0742520:intron 30.0%
! TCACATTTGTGTTAAGGTTT+TGG + chr5_1:62456954-62456973 Msa0742520:intron 30.0%
!!! TTTTGGTTTGAAGCATCAAT+GGG + chr5_1:62456971-62456990 Msa0742520:intron 30.0%
!! CTTTAGTTGATGATTAGAAG+AGG + chr5_1:62457158-62457177 Msa0742520:intron 30.0%
AAGAGGTTAAATTGCAAAGT+TGG + chr5_1:62457175-62457194 Msa0742520:intron 30.0%
AGAGGTTAAATTGCAAAGTT+GGG + chr5_1:62457176-62457195 Msa0742520:intron 30.0%
AAAAAGAGCCTTGAGATTAT+TGG + chr5_1:62457233-62457252 Msa0742520:intron 30.0%
ATGATGAACCAATAATCTCA+AGG - chr5_1:62457244-62457263 None:intergenic 30.0%
!!! TTAAGGTTTTGGTTTGTGAA+GGG - chr5_1:62457276-62457295 None:intergenic 30.0%
!!! TTTAAGGTTTTGGTTTGTGA+AGG - chr5_1:62457277-62457296 None:intergenic 30.0%
!!! AAGTTCTAGGTTTAAGGTTT+TGG - chr5_1:62457287-62457306 None:intergenic 30.0%
TAGGTCTAACATAAAGTTCT+AGG - chr5_1:62457300-62457319 None:intergenic 30.0%
TAGCAATCAACCATGAAAAT+AGG - chr5_1:62457389-62457408 None:intergenic 30.0%
TCATCACAAATATTAAGCGA+AGG - chr5_1:62457526-62457545 None:intergenic 30.0%
! GTTTAAAGCTTGGTTTGATT+AGG + chr5_1:62457652-62457671 Msa0742520:intron 30.0%
! ATTCTAGTGATTAGTTGCTT+AGG - chr5_1:62457903-62457922 None:intergenic 30.0%
!!! TATTTTAACCTAAAAGCCTG+TGG - chr5_1:62457939-62457958 None:intergenic 30.0%
!!! ACAGGCTTTTAGGTTAAAAT+AGG + chr5_1:62457938-62457957 Msa0742520:intron 30.0%
GGGATGAAAATACGAAATAT+GGG - chr5_1:62458078-62458097 None:intergenic 30.0%
! TAATTAGTAGAAGCTGATTC+GGG - chr5_1:62458098-62458117 None:intergenic 30.0%
! TGGATGATTCCTTTTATTGT+TGG + chr5_1:62458337-62458356 Msa0742520:three_prime_UTR 30.0%
AACCACTTTATTGGAAATAC+AGG + chr5_1:62458509-62458528 Msa0742520:three_prime_UTR 30.0%
AACCTGTATTTCCAATAAAG+TGG - chr5_1:62458514-62458533 None:intergenic 30.0%
ATGTGATGTAGTAAGGAGTT+TGG - chr5_1:62453606-62453625 None:intergenic 35.0%
TCAATCGAGTGGTTATAGAA+GGG - chr5_1:62453873-62453892 None:intergenic 35.0%
TCTGCAATTGCAAGACAATT+CGG + chr5_1:62454448-62454467 Msa0742520:CDS 35.0%
!! ATTTCCAGATTTTCGAGAAC+AGG - chr5_1:62454563-62454582 None:intergenic 35.0%
! TTCTTTTGCTCCTGAATCTT+TGG + chr5_1:62454583-62454602 Msa0742520:CDS 35.0%
ATCAATGTTGAGAATGAGGT+TGG + chr5_1:62454647-62454666 Msa0742520:CDS 35.0%
TCAATGTTGAGAATGAGGTT+GGG + chr5_1:62454648-62454667 Msa0742520:CDS 35.0%
GCTGCTTAGTTTAACTACAA+AGG + chr5_1:62454865-62454884 Msa0742520:CDS 35.0%
! TTCAGGAAAATCTAAGACAG+GGG - chr5_1:62455002-62455021 None:intergenic 35.0%
!!! GTGTCCGTGTATTTTTTGTT+TGG + chr5_1:62455155-62455174 Msa0742520:intron 35.0%
!! AATCAAATGATGGATGCATC+TGG - chr5_1:62455208-62455227 None:intergenic 35.0%
GAAGGTGATGAATCAAATGA+TGG - chr5_1:62455218-62455237 None:intergenic 35.0%
TTCACTTCCCATTCATATGA+AGG - chr5_1:62455236-62455255 None:intergenic 35.0%
GAAGGTCAATAAAGGTCAAA+TGG - chr5_1:62455289-62455308 None:intergenic 35.0%
TCTCGGAAATTTAAATGAGC+TGG + chr5_1:62455316-62455335 Msa0742520:CDS 35.0%
! AGTTTTTCGCTAGAACAACA+GGG + chr5_1:62455395-62455414 Msa0742520:CDS 35.0%
AAAAATCTCCGATCTACCAA+AGG + chr5_1:62455430-62455449 Msa0742520:CDS 35.0%
!! GTGAAATTTAACTTGACACG+TGG - chr5_1:62455462-62455481 None:intergenic 35.0%
TGGCATGCATGTAAAAACAA+GGG - chr5_1:62455581-62455600 None:intergenic 35.0%
AGAAGCCTAGAAATACAGTT+AGG + chr5_1:62455713-62455732 Msa0742520:intron 35.0%
CTAGAAATACAGTTAGGCTT+GGG + chr5_1:62455719-62455738 Msa0742520:intron 35.0%
ATAGTTAAGTTTGGATGGGA+AGG + chr5_1:62455787-62455806 Msa0742520:intron 35.0%
TAGTTAAGTTTGGATGGGAA+GGG + chr5_1:62455788-62455807 Msa0742520:intron 35.0%
CATTCAGTTAACTGGAGAAT+TGG + chr5_1:62455815-62455834 Msa0742520:intron 35.0%
AATAGTGAGAGTGAGAGAAA+AGG + chr5_1:62456064-62456083 Msa0742520:intron 35.0%
!! TAGGAGTGTCATCAAAATGA+TGG - chr5_1:62456179-62456198 None:intergenic 35.0%
CCTAACATAGATTATCATGG+GGG + chr5_1:62456195-62456214 Msa0742520:intron 35.0%
ACTAACAGTTGAAATGTGTC+AGG - chr5_1:62456241-62456260 None:intergenic 35.0%
ACTAGAAGTTAGAATGGCAT+AGG - chr5_1:62456415-62456434 None:intergenic 35.0%
TTGTATCATCTCTCCTTATG+AGG + chr5_1:62456452-62456471 Msa0742520:intron 35.0%
TGTATCATCTCTCCTTATGA+GGG + chr5_1:62456453-62456472 Msa0742520:intron 35.0%
GTTGATTACACTCCAATAGA+TGG + chr5_1:62456676-62456695 Msa0742520:intron 35.0%
AGACTAAGATGGGAAATAAC+TGG + chr5_1:62456896-62456915 Msa0742520:intron 35.0%
AGATGGGAAATAACTGGTTA+AGG + chr5_1:62456902-62456921 Msa0742520:intron 35.0%
!!! GTTTTGGTTTGAAGCATCAA+TGG + chr5_1:62456970-62456989 Msa0742520:intron 35.0%
!! TTTGGTTTGAAGCATCAATG+GGG + chr5_1:62456972-62456991 Msa0742520:intron 35.0%
TTGATGTCTTCGTGAGATTT+AGG - chr5_1:62457070-62457089 None:intergenic 35.0%
! AAATAGAGTATCATTCCGAC+AGG + chr5_1:62457115-62457134 Msa0742520:intron 35.0%
! AATAGAGTATCATTCCGACA+GGG + chr5_1:62457116-62457135 Msa0742520:intron 35.0%
GAGGTTAAATTGCAAAGTTG+GGG + chr5_1:62457177-62457196 Msa0742520:intron 35.0%
TAGGCTAAAGAGTAGAAAGT+AGG - chr5_1:62457319-62457338 None:intergenic 35.0%
TAGCCTATCACATATCCTTT+CGG + chr5_1:62457332-62457351 Msa0742520:intron 35.0%
ATCAACCATGAAAATAGGCA+TGG - chr5_1:62457384-62457403 None:intergenic 35.0%
CAATAAAGTTTCGAGCTTCA+AGG - chr5_1:62457419-62457438 None:intergenic 35.0%
CTCGAAACTTTATTGTCTCA+AGG + chr5_1:62457424-62457443 Msa0742520:intron 35.0%
GGAACAAGTGAATATAGACA+AGG - chr5_1:62457479-62457498 None:intergenic 35.0%
CGGGATGAAAATACGAAATA+TGG - chr5_1:62458079-62458098 None:intergenic 35.0%
TTCACTAAGAAGAAGACGTT+GGG + chr5_1:62458215-62458234 Msa0742520:three_prime_UTR 35.0%
AACAAACATAATAGCTGCCA+CGG - chr5_1:62458295-62458314 None:intergenic 35.0%
! TTCGTGATTAGTTAGTCTCA+TGG + chr5_1:62458317-62458336 Msa0742520:three_prime_UTR 35.0%
! GATTCCTTTTATTGTTGGTC+TGG + chr5_1:62458342-62458361 Msa0742520:three_prime_UTR 35.0%
! GTAGTAAGGAGTTTGGTAGT+TGG - chr5_1:62453599-62453618 None:intergenic 40.0%
!! TACGAATGCAGGTTTTGGTA+GGG - chr5_1:62453641-62453660 None:intergenic 40.0%
GAATTCATAAATTACGGGGC+TGG - chr5_1:62453736-62453755 None:intergenic 40.0%
GTCAATCGAGTGGTTATAGA+AGG - chr5_1:62453874-62453893 None:intergenic 40.0%
ACAACTGGATCTATGAAGCA+CGG + chr5_1:62454115-62454134 Msa0742520:intron 40.0%
TTGTGTCGTGTTTGTGACAT+GGG + chr5_1:62454205-62454224 Msa0742520:intron 40.0%
TGTCATCTTCAACCTTGAAG+AGG + chr5_1:62454618-62454637 Msa0742520:CDS 40.0%
CAATGTTGAGAATGAGGTTG+GGG + chr5_1:62454649-62454668 Msa0742520:CDS 40.0%
! AGACTAAGGTACTTGAGATC+AGG - chr5_1:62454695-62454714 None:intergenic 40.0%
ACGTGATATTGGTGAGACTA+AGG - chr5_1:62454709-62454728 None:intergenic 40.0%
AGCATCACGAAACGTGATAT+TGG - chr5_1:62454720-62454739 None:intergenic 40.0%
AACAGATTCACTTTCAGGAG+TGG - chr5_1:62454795-62454814 None:intergenic 40.0%
GGTTCAACAGATTCACTTTC+AGG - chr5_1:62454800-62454819 None:intergenic 40.0%
GTTTAATTCCAGAGAGAGCT+CGG - chr5_1:62454838-62454857 None:intergenic 40.0%
! CTTTTGTCTTGTACAAGCAG+TGG + chr5_1:62454966-62454985 Msa0742520:intron 40.0%
TAAAGCAAGTGGCGAAATTC+AGG - chr5_1:62455019-62455038 None:intergenic 40.0%
GTTATGAGAGTTTGTAGCAC+AGG - chr5_1:62455103-62455122 None:intergenic 40.0%
! CAGTTTTTCGCTAGAACAAC+AGG + chr5_1:62455394-62455413 Msa0742520:CDS 40.0%
! GTTTTTCGCTAGAACAACAG+GGG + chr5_1:62455396-62455415 Msa0742520:CDS 40.0%
! TTTTTCGCTAGAACAACAGG+GGG + chr5_1:62455397-62455416 Msa0742520:CDS 40.0%
GTGGCATGCATGTAAAAACA+AGG - chr5_1:62455582-62455601 None:intergenic 40.0%
CCAAGCCTAACTGTATTTCT+AGG - chr5_1:62455721-62455740 None:intergenic 40.0%
CCTAGAAATACAGTTAGGCT+TGG + chr5_1:62455718-62455737 Msa0742520:intron 40.0%
AGTTAAGTTTGGATGGGAAG+GGG + chr5_1:62455789-62455808 Msa0742520:intron 40.0%
! ATTGGTGATCAGAAGAGACT+AGG + chr5_1:62455833-62455852 Msa0742520:intron 40.0%
AGCAAGGTGATAGAATTGGT+TGG - chr5_1:62456003-62456022 None:intergenic 40.0%
AACCAATTCTATCACCTTGC+TGG + chr5_1:62456002-62456021 Msa0742520:intron 40.0%
ACCAATTCTATCACCTTGCT+GGG + chr5_1:62456003-62456022 Msa0742520:intron 40.0%
AACCAATGAGATGCTAGTAG+TGG + chr5_1:62456150-62456169 Msa0742520:intron 40.0%
CCCCCATGATAATCTATGTT+AGG - chr5_1:62456198-62456217 None:intergenic 40.0%
GAGCTGCAATGGACATATAT+TGG - chr5_1:62456360-62456379 None:intergenic 40.0%
!! ACAACAGCTGATCCACTTTT+TGG + chr5_1:62456557-62456576 Msa0742520:intron 40.0%
!!! TGATCCACTTTTTGGCACAT+GGG + chr5_1:62456565-62456584 Msa0742520:intron 40.0%
!! ACTTTTTGGCACATGGGATA+GGG + chr5_1:62456571-62456590 Msa0742520:intron 40.0%
CTAATAGCTCAAACAGGCAA+TGG - chr5_1:62456702-62456721 None:intergenic 40.0%
GTGCAACTAATAGCTCAAAC+AGG - chr5_1:62456708-62456727 None:intergenic 40.0%
! TTCTAAGGATCAGCTTGTGT+AGG - chr5_1:62456839-62456858 None:intergenic 40.0%
! CTAGTCACAGTGCTATTCTA+AGG - chr5_1:62456854-62456873 None:intergenic 40.0%
TGACCATGACAGACTAAGAT+GGG + chr5_1:62456886-62456905 Msa0742520:intron 40.0%
TTTCCCATCTTAGTCTGTCA+TGG - chr5_1:62456892-62456911 None:intergenic 40.0%
GACAACACTTGCAAGCAATT+AGG + chr5_1:62457042-62457061 Msa0742520:intron 40.0%
TCACGAAGACATCAAATGCA+CGG + chr5_1:62457075-62457094 Msa0742520:intron 40.0%
TGAATTGAACAACTCCCTGT+CGG - chr5_1:62457133-62457152 None:intergenic 40.0%
! GCAAAGTTGGGGTTTTCAAA+TGG + chr5_1:62457188-62457207 Msa0742520:intron 40.0%
AGACCGAAAGGATATGTGAT+AGG - chr5_1:62457338-62457357 None:intergenic 40.0%
! AGCAACCATGCCTATTTTCA+TGG + chr5_1:62457376-62457395 Msa0742520:intron 40.0%
TCTTCTTGTCTTGGGATTGT+TGG - chr5_1:62457697-62457716 None:intergenic 40.0%
GAGTAGACTCTTCTTGTCTT+GGG - chr5_1:62457705-62457724 None:intergenic 40.0%
TGAGTAGACTCTTCTTGTCT+TGG - chr5_1:62457706-62457725 None:intergenic 40.0%
ACTCATGTTCATCGTAGACA+TGG + chr5_1:62457725-62457744 Msa0742520:intron 40.0%
AATGTTCCACAAGAAACCAC+AGG + chr5_1:62457920-62457939 Msa0742520:intron 40.0%
TAAAAGCCTGTGGTTTCTTG+TGG - chr5_1:62457929-62457948 None:intergenic 40.0%
! ACAAGAAACCACAGGCTTTT+AGG + chr5_1:62457928-62457947 Msa0742520:intron 40.0%
CTTCACTAAGAAGAAGACGT+TGG + chr5_1:62458214-62458233 Msa0742520:three_prime_UTR 40.0%
TTAATTTCAGCACGTTCACG+TGG + chr5_1:62458263-62458282 Msa0742520:three_prime_UTR 40.0%
GACTCCAGACCAACAATAAA+AGG - chr5_1:62458349-62458368 None:intergenic 40.0%
TCTGTCAATGTCGTCATCGT+CGG - chr5_1:62453571-62453590 None:intergenic 45.0%
GGAGAGGATGTGATGTAGTA+AGG - chr5_1:62453613-62453632 None:intergenic 45.0%
!! GTACGAATGCAGGTTTTGGT+AGG - chr5_1:62453642-62453661 None:intergenic 45.0%
! TGTGGTACGAATGCAGGTTT+TGG - chr5_1:62453646-62453665 None:intergenic 45.0%
CTCGCAAATGGCGCAATATT+TGG + chr5_1:62453676-62453695 Msa0742520:CDS 45.0%
TTGGAAGAATCTCGAAGCCT+TGG + chr5_1:62453695-62453714 Msa0742520:CDS 45.0%
!! GAGGACAGTGTTGACGAAAA+CGG - chr5_1:62453787-62453806 None:intergenic 45.0%
TCCGCAAATCTCGCATTGTT+CGG + chr5_1:62453811-62453830 Msa0742520:CDS 45.0%
TCCGAACAATGCGAGATTTG+CGG - chr5_1:62453815-62453834 None:intergenic 45.0%
GAACGTGATAGCATGAGAGA+CGG - chr5_1:62453842-62453861 None:intergenic 45.0%
ATAACCACTCGATTGACACG+TGG + chr5_1:62453877-62453896 Msa0742520:CDS 45.0%
GATGAAACTCCTCGAGGTTT+GGG - chr5_1:62453920-62453939 None:intergenic 45.0%
AGATGAAACTCCTCGAGGTT+TGG - chr5_1:62453921-62453940 None:intergenic 45.0%
AAGGTTAGGGCAAGAGAAGA+GGG - chr5_1:62453985-62454004 None:intergenic 45.0%
ATTGTTGCCTGAGAGAGACA+AGG - chr5_1:62454004-62454023 None:intergenic 45.0%
CTTGTGTCGTGTTTGTGACA+TGG + chr5_1:62454204-62454223 Msa0742520:intron 45.0%
TGTGTCGTGTTTGTGACATG+GGG + chr5_1:62454206-62454225 Msa0742520:intron 45.0%
TTACTAATCCGGACACTCCT+CGG - chr5_1:62454234-62454253 None:intergenic 45.0%
AGTTGCAGCAACTTCAGTGA+CGG - chr5_1:62454485-62454504 None:intergenic 45.0%
TCTGTGAATGTCCTTCTCTC+TGG + chr5_1:62454533-62454552 Msa0742520:CDS 45.0%
CTGTCCTGTTCTCGAAAATC+TGG + chr5_1:62454556-62454575 Msa0742520:CDS 45.0%
CTGAATCTTTGGCCACACTT+CGG + chr5_1:62454594-62454613 Msa0742520:CDS 45.0%
TGAATCTTTGGCCACACTTC+GGG + chr5_1:62454595-62454614 Msa0742520:CDS 45.0%
! TTTCGTGATGCTGCTTCTGT+TGG + chr5_1:62454728-62454747 Msa0742520:CDS 45.0%
! TTCGTGATGCTGCTTCTGTT+GGG + chr5_1:62454729-62454748 Msa0742520:CDS 45.0%
TGTTGGGAACTTGCACAATG+TGG + chr5_1:62454745-62454764 Msa0742520:CDS 45.0%
ATGGATGCATCTGGCAACAA+TGG - chr5_1:62455199-62455218 None:intergenic 45.0%
!! TAGATACTTTGGGGGTGTCA+TGG - chr5_1:62455638-62455657 None:intergenic 45.0%
GTTAAGTTTGGATGGGAAGG+GGG + chr5_1:62455790-62455809 Msa0742520:intron 45.0%
ACCCAGCAAGGTGATAGAAT+TGG - chr5_1:62456007-62456026 None:intergenic 45.0%
TATCACCTTGCTGGGTGTAT+GGG + chr5_1:62456011-62456030 Msa0742520:intron 45.0%
AGCCACTACTAGCATCTCAT+TGG - chr5_1:62456155-62456174 None:intergenic 45.0%
ACATGGTCTTTGACCACACT+TGG - chr5_1:62456486-62456505 None:intergenic 45.0%
GTGGTCAAAGACCATGTCAT+TGG + chr5_1:62456489-62456508 Msa0742520:intron 45.0%
!!! CTGATCCACTTTTTGGCACA+TGG + chr5_1:62456564-62456583 Msa0742520:intron 45.0%
CTATCCCATGTGCCAAAAAG+TGG - chr5_1:62456572-62456591 None:intergenic 45.0%
!! CACTTTTTGGCACATGGGAT+AGG + chr5_1:62456570-62456589 Msa0742520:intron 45.0%
AACAGGCAATGGCCATCTAT+TGG - chr5_1:62456691-62456710 None:intergenic 45.0%
GTGACCATGACAGACTAAGA+TGG + chr5_1:62456885-62456904 Msa0742520:intron 45.0%
GACATTTGCAGTGTGCTTTG+CGG + chr5_1:62458191-62458210 Msa0742520:intron 45.0%
AGAAGACGTTGGGAGCAAAA+CGG + chr5_1:62458225-62458244 Msa0742520:three_prime_UTR 45.0%
! GCTTTTACACTCCCCGACAT+TGG + chr5_1:62453496-62453515 Msa0742520:five_prime_UTR 50.0%
TGGCCTCCTTCTTCCAATGT+CGG - chr5_1:62453512-62453531 None:intergenic 50.0%
ACATTGGAAGAAGGAGGCCA+TGG + chr5_1:62453512-62453531 Msa0742520:exon 50.0%
! TTTTGGTAGGGAGGAAGGAG+AGG - chr5_1:62453629-62453648 None:intergenic 50.0%
!! GAATGCAGGTTTTGGTAGGG+AGG - chr5_1:62453638-62453657 None:intergenic 50.0%
GGAACTGTCGCAGAAATCCA+AGG - chr5_1:62453715-62453734 None:intergenic 50.0%
TGATCCACGTGTCAATCGAG+TGG - chr5_1:62453884-62453903 None:intergenic 50.0%
GAGTGAGATGAAACTCCTCG+AGG - chr5_1:62453926-62453945 None:intergenic 50.0%
CAAGGTTAGGGCAAGAGAAG+AGG - chr5_1:62453986-62454005 None:intergenic 50.0%
GCCTGAGAGAGACAAGGTTA+GGG - chr5_1:62453998-62454017 None:intergenic 50.0%
TGCCTGAGAGAGACAAGGTT+AGG - chr5_1:62453999-62454018 None:intergenic 50.0%
CGAAGTGTGGCCAAAGATTC+AGG - chr5_1:62454596-62454615 None:intergenic 50.0%
TGAAGATGACACCCGAAGTG+TGG - chr5_1:62454609-62454628 None:intergenic 50.0%
GATCAGGCGCGTCTATTTCA+AGG - chr5_1:62454679-62454698 None:intergenic 50.0%
GGCAGATGCCTTTGGTAGAT+CGG - chr5_1:62455441-62455460 None:intergenic 50.0%
CACTGAGCTGCATCATCTCA+AGG + chr5_1:62455479-62455498 Msa0742520:exon 50.0%
! AGGGGGTGCATTCAGTTAAC+TGG + chr5_1:62455807-62455826 Msa0742520:intron 50.0%
CTATCACCTTGCTGGGTGTA+TGG + chr5_1:62456010-62456029 Msa0742520:intron 50.0%
GTGAGAGTGAGAGAAAAGGC+AGG + chr5_1:62456068-62456087 Msa0742520:intron 50.0%
GAGTGAGAGAAAAGGCAGGT+TGG + chr5_1:62456072-62456091 Msa0742520:intron 50.0%
AGAGTGCAACAGAGCTGCAA+TGG - chr5_1:62456371-62456390 None:intergenic 50.0%
CTTGGCAGTTCTCCCTCATA+AGG - chr5_1:62456468-62456487 None:intergenic 50.0%
TTTGGCACATGGGATAGGGT+AGG + chr5_1:62456575-62456594 Msa0742520:intron 50.0%
ACACACTCACTGAGACCGAA+AGG - chr5_1:62457350-62457369 None:intergenic 50.0%
!! CAAAAGAGCACCCTGAAGCT+TGG + chr5_1:62457986-62458005 Msa0742520:intron 50.0%
CACTCCCCGACATTGGAAGA+AGG + chr5_1:62453503-62453522 Msa0742520:five_prime_UTR 55.0%
TCCCCGACATTGGAAGAAGG+AGG + chr5_1:62453506-62453525 Msa0742520:five_prime_UTR 55.0%
GCCTCCTTCTTCCAATGTCG+GGG - chr5_1:62453510-62453529 None:intergenic 55.0%
GGCCTCCTTCTTCCAATGTC+GGG - chr5_1:62453511-62453530 None:intergenic 55.0%
GTCAATGTCGTCATCGTCGG+AGG - chr5_1:62453568-62453587 None:intergenic 55.0%
!! GCAGGTTTTGGTAGGGAGGA+AGG - chr5_1:62453634-62453653 None:intergenic 55.0%
TTTGCGAGAAACGAGGGGTG+TGG - chr5_1:62453664-62453683 None:intergenic 55.0%
CACCCCTCGTTTCTCGCAAA+TGG + chr5_1:62453664-62453683 Msa0742520:CDS 55.0%
CGCCATTTGCGAGAAACGAG+GGG - chr5_1:62453669-62453688 None:intergenic 55.0%
GCGCCATTTGCGAGAAACGA+GGG - chr5_1:62453670-62453689 None:intergenic 55.0%
TGCGCCATTTGCGAGAAACG+AGG - chr5_1:62453671-62453690 None:intergenic 55.0%
TGCGAGATTTGCGGAGAGTG+AGG - chr5_1:62453806-62453825 None:intergenic 55.0%
ACGTGGATCAATGCCGCCAT+TGG + chr5_1:62453894-62453913 Msa0742520:CDS 55.0%
AACAGGCACCCTGTTGAAGC+CGG - chr5_1:62453961-62453980 None:intergenic 55.0%
GGGCAAGAGAAGAGGGAAAC+AGG - chr5_1:62453978-62453997 None:intergenic 55.0%
GCCCTAACCTTGTCTCTCTC+AGG + chr5_1:62453994-62454013 Msa0742520:CDS 55.0%
TTATCCCTGTTGGGGCGTGT+AGG - chr5_1:62454144-62454163 None:intergenic 55.0%
GTTTGTGACATGGGGATCCG+AGG + chr5_1:62454214-62454233 Msa0742520:intron 55.0%
GAACAGGACAGCCAGAGAGA+AGG - chr5_1:62454547-62454566 None:intergenic 55.0%
GCTCGGAGAAGACTGAGTAC+AGG - chr5_1:62454821-62454840 None:intergenic 55.0%
AGTCTTCTCCGAGCTCTCTC+TGG + chr5_1:62454827-62454846 Msa0742520:CDS 55.0%
CGCTAGAACAACAGGGGGAA+TGG + chr5_1:62455402-62455421 Msa0742520:CDS 55.0%
TGACACGTGGCAGATGCCTT+TGG - chr5_1:62455449-62455468 None:intergenic 55.0%
TTCCACCCATACACCCAGCA+AGG - chr5_1:62456019-62456038 None:intergenic 55.0%
TGAGGGAGAACTGCCAAGTG+TGG + chr5_1:62456470-62456489 Msa0742520:intron 55.0%
TGTCACTCCCCAAGTCAGAG+AGG - chr5_1:62458046-62458065 None:intergenic 55.0%
GGAGGCCATGGATACTCCGA+TGG + chr5_1:62453524-62453543 Msa0742520:exon 60.0%
GGCCATGGATACTCCGATGG+CGG + chr5_1:62453527-62453546 Msa0742520:exon 60.0%
! CTCCGCCATCGGAGTATCCA+TGG - chr5_1:62453532-62453551 None:intergenic 60.0%
! CATGGATACTCCGATGGCGG+AGG + chr5_1:62453530-62453549 Msa0742520:exon 60.0%
! GAGGGGTGTGGTACGAATGC+AGG - chr5_1:62453652-62453671 None:intergenic 60.0%
CTCGAGGTTTGGGCCAATGG+CGG - chr5_1:62453910-62453929 None:intergenic 60.0%
CTCCTCGAGGTTTGGGCCAA+TGG - chr5_1:62453913-62453932 None:intergenic 60.0%
GACACCTACACGCCCCAACA+GGG + chr5_1:62454137-62454156 Msa0742520:intron 60.0%
!! ATGGGGATCCGAGGAGTGTC+CGG + chr5_1:62454223-62454242 Msa0742520:intron 60.0%
CACCTTGCTGGGTGTATGGG+TGG + chr5_1:62456014-62456033 Msa0742520:intron 60.0%
GAGCACCCTGAAGCTTGGCA+CGG + chr5_1:62457991-62458010 Msa0742520:intron 60.0%
CACAGCCGTGCCAAGCTTCA+GGG - chr5_1:62457999-62458018 None:intergenic 60.0%
CCCAAGTCAGAGAGGAGGCA+CGG - chr5_1:62458038-62458057 None:intergenic 60.0%
CCGTGCCTCCTCTCTGACTT+GGG + chr5_1:62458035-62458054 Msa0742520:intron 60.0%
! CGTGCCTCCTCTCTGACTTG+GGG + chr5_1:62458036-62458055 Msa0742520:intron 60.0%
CACTCCCCAAGTCAGAGAGG+AGG - chr5_1:62458043-62458062 None:intergenic 60.0%
TCAGCACGTTCACGTGGCTC+TGG + chr5_1:62458269-62458288 Msa0742520:three_prime_UTR 60.0%
!! GGATACTCCGATGGCGGAGG+CGG + chr5_1:62453533-62453552 Msa0742520:CDS 65.0%
CGCCATTGGCCCAAACCTCG+AGG + chr5_1:62453908-62453927 Msa0742520:CDS 65.0%
CTCACTCTGCTTACCGCCGC+CGG + chr5_1:62453939-62453958 Msa0742520:CDS 65.0%
!! TTACCGCCGCCGGCTTCAAC+AGG + chr5_1:62453949-62453968 Msa0742520:CDS 65.0%
!! TACCGCCGCCGGCTTCAACA+GGG + chr5_1:62453950-62453969 Msa0742520:CDS 65.0%
AGGCACCCTGTTGAAGCCGG+CGG - chr5_1:62453958-62453977 None:intergenic 65.0%
GGACACCTACACGCCCCAAC+AGG + chr5_1:62454136-62454155 Msa0742520:intron 65.0%
GCACAGCCGTGCCAAGCTTC+AGG - chr5_1:62458000-62458019 None:intergenic 65.0%
GCCGTGCCTCCTCTCTGACT+TGG + chr5_1:62458034-62458053 Msa0742520:intron 65.0%
GACTCTGCCGCCTCCGCCAT+CGG - chr5_1:62453543-62453562 None:intergenic 70.0%
CACCCTGTTGAAGCCGGCGG+CGG - chr5_1:62453955-62453974 None:intergenic 70.0%
GCTTGGCACGGCTGTGCTGC+TGG + chr5_1:62458003-62458022 Msa0742520:intron 70.0%
! TGGCACGGCTGTGCTGCTGG+TGG + chr5_1:62458006-62458025 Msa0742520:intron 70.0%
! CGGCTGTGCTGCTGGTGGCA+CGG + chr5_1:62458011-62458030 Msa0742520:intron 70.0%
! GGCTGTGCTGCTGGTGGCAC+GGG + chr5_1:62458012-62458031 Msa0742520:intron 70.0%
!! CGTTCACGTGGCTCTGGCCG+TGG + chr5_1:62458275-62458294 Msa0742520:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 62453483 62458591 62453483 ID=Msa0742520;Name=Msa0742520
chr5_1 mRNA 62453483 62458591 62453483 ID=Msa0742520-mRNA-1;Parent=Msa0742520;Name=Msa0742520-mRNA-1;_AED=0.12;_eAED=0.12;_QI=48|1|1|1|0.75|0.6|5|406|455
chr5_1 exon 62453483 62454015 62453483 ID=Msa0742520-mRNA-1:exon:18321;Parent=Msa0742520-mRNA-1
chr5_1 exon 62454430 62454886 62454430 ID=Msa0742520-mRNA-1:exon:18322;Parent=Msa0742520-mRNA-1
chr5_1 exon 62454986 62455135 62454986 ID=Msa0742520-mRNA-1:exon:18323;Parent=Msa0742520-mRNA-1
chr5_1 exon 62455209 62455500 62455209 ID=Msa0742520-mRNA-1:exon:18324;Parent=Msa0742520-mRNA-1
chr5_1 exon 62458202 62458591 62458202 ID=Msa0742520-mRNA-1:exon:18325;Parent=Msa0742520-mRNA-1
chr5_1 five_prime_UTR 62453483 62453530 62453483 ID=Msa0742520-mRNA-1:five_prime_utr;Parent=Msa0742520-mRNA-1
chr5_1 CDS 62453531 62454015 62453531 ID=Msa0742520-mRNA-1:cds;Parent=Msa0742520-mRNA-1
chr5_1 CDS 62454430 62454886 62454430 ID=Msa0742520-mRNA-1:cds;Parent=Msa0742520-mRNA-1
chr5_1 CDS 62454986 62455135 62454986 ID=Msa0742520-mRNA-1:cds;Parent=Msa0742520-mRNA-1
chr5_1 CDS 62455209 62455484 62455209 ID=Msa0742520-mRNA-1:cds;Parent=Msa0742520-mRNA-1
chr5_1 three_prime_UTR 62455485 62455500 62455485 ID=Msa0742520-mRNA-1:three_prime_utr;Parent=Msa0742520-mRNA-1
chr5_1 three_prime_UTR 62458202 62458591 62458202 ID=Msa0742520-mRNA-1:three_prime_utr;Parent=Msa0742520-mRNA-1
Gene Sequence

>Msa0742520

ATGGATACTCCGATGGCGGAGGCGGCAGAGTCAACCTCCGACGATGACGACATTGACAGAATAAACCAACTACCAAACTCCTTACTACATCACATCCTCTCCTTCCTCCCTACCAAAACCTGCATTCGTACCACACCCCTCGTTTCTCGCAAATGGCGCAATATTTGGAAGAATCTCGAAGCCTTGGATTTCTGCGACAGTTCCAGCCCCGTAATTTATGAATTCGATAACGACGAACAGTTCTTGATCTTCTCCGTTTTCGTCAACACTGTCCTCACTCTCCGCAAATCTCGCATTGTTCGGAAGTTCCGTCTCTCATGCTATCACGTTCAACTCGATCCCTTCTATAACCACTCGATTGACACGTGGATCAATGCCGCCATTGGCCCAAACCTCGAGGAGTTTCATCTCACTCTGCTTACCGCCGCCGGCTTCAACAGGGTGCCTGTTTCCCTCTTCTCTTGCCCTAACCTTGTCTCTCTCAGTTTCAATGACTATATCATTCTGCAATTGCAAGACAATTCGGAGATTTGTTTACCGTCACTGAAGTTGCTGCAACTACTAGACATGTATAATTTGGATTTAAATTCTGTGAATGTCCTTCTCTCTGGCTGTCCTGTTCTCGAAAATCTGGAAATTTCTTTTGCTCCTGAATCTTTGGCCACACTTCGGGTGTCATCTTCAACCTTGAAGAGGTTAAAAATCAATGTTGAGAATGAGGTTGGGGCTTACCTTGAAATAGACGCGCCTGATCTCAAGTACCTTAGTCTCACCAATATCACGTTTCGTGATGCTGCTTCTGTTGGGAACTTGCACAATGTGGAAGAAGCACATCTAGATGTATTTTCCACTCCTGAAAGTGAATCTGTTGAACCTGTACTCAGTCTTCTCCGAGCTCTCTCTGGAATTAAACATCTAGAGCTGCTTAGTTTAACTACAAAGTGGCTATTTGCTGCCCCTGTCTTAGATTTTCCTGAATTTCGCCACTTGCTTTATATAGAGCTTTGGTTTCTCTCTGTCAACATAAGTTTTCTGATCGACATGCTTCAAAAATGTCCTGTGCTACAAACTCTCATAACATTCAACTACAAGATGCATCCATCATTTGATTCATCACCTTCATATGAATGGGAAGTGAAGCCGAAAAGTGTTCCTAAATGTCTTGTATCCCATTTGACCTTTATTGACCTTCAAGAATATCTCGGAAATTTAAATGAGCTGGAATTTACAAGCTATGTTTTGCAAAATGGACTTGTTTTGAAGACAATGCATATTCGCAGTTTTTCGCTAGAACAACAGGGGGAATGGTTGAAAAAAATCTCCGATCTACCAAAGGCATCTGCCACGTGTCAAGTTAAATTTCACTGA
Protein sequence

>Msa0742520

MDTPMAEAAESTSDDDDIDRINQLPNSLLHHILSFLPTKTCIRTTPLVSRKWRNIWKNLEALDFCDSSSPVIYEFDNDEQFLIFSVFVNTVLTLRKSRIVRKFRLSCYHVQLDPFYNHSIDTWINAAIGPNLEEFHLTLLTAAGFNRVPVSLFSCPNLVSLSFNDYIILQLQDNSEICLPSLKLLQLLDMYNLDLNSVNVLLSGCPVLENLEISFAPESLATLRVSSSTLKRLKINVENEVGAYLEIDAPDLKYLSLTNITFRDAASVGNLHNVEEAHLDVFSTPESESVEPVLSLLRALSGIKHLELLSLTTKWLFAAPVLDFPEFRHLLYIELWFLSVNISFLIDMLQKCPVLQTLITFNYKMHPSFDSSPSYEWEVKPKSVPKCLVSHLTFIDLQEYLGNLNELEFTSYVLQNGLVLKTMHIRSFSLEQQGEWLKKISDLPKASATCQVKFH*