Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0751740 | KAG5061681.1 | 84.146 | 738 | 69 | 4 | 9 | 731 | 14 | 718 | 0.0 | 1217 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0751740 | sp|B9DHT4|ARIA_ARATH | 76.414 | 725 | 139 | 2 | 8 | 732 | 15 | 707 | 0.0 | 1080 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0751740 | G7K2B1 | 94.134 | 733 | 11 | 2 | 1 | 732 | 1 | 702 | 0.0 | 1353 |
Gene ID | Type | Classification |
---|---|---|
Msa0751740 | TR | TRAF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0751740 | Msa0822740 | 0.826611 | 2.467581e-54 | -8.615850e-47 |
Msa0751740 | Msa0831800 | 0.835468 | 1.648639e-56 | -8.615850e-47 |
Msa0751740 | Msa1372000 | 0.830178 | 3.398837e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0751740 | MtrunA17_Chr5g0394261 | 94.134 | 733 | 11 | 2 | 1 | 732 | 1 | 702 | 0.0 | 1353 |
Msa0751740 | MtrunA17_Chr1g0205751 | 82.597 | 724 | 92 | 3 | 7 | 729 | 12 | 702 | 0.0 | 1171 |
Msa0751740 | MtrunA17_Chr7g0259851 | 64.181 | 684 | 209 | 3 | 42 | 724 | 36 | 684 | 0.0 | 842 |
Msa0751740 | MtrunA17_Chr7g0259501 | 31.875 | 160 | 95 | 2 | 544 | 691 | 187 | 344 | 1.38e-16 | 82.8 |
Msa0751740 | MtrunA17_Chr1g0152561 | 26.800 | 250 | 175 | 3 | 322 | 563 | 74 | 323 | 1.49e-16 | 82.0 |
Msa0751740 | MtrunA17_Chr1g0185861 | 30.435 | 161 | 94 | 3 | 546 | 691 | 191 | 348 | 4.61e-14 | 75.1 |
Msa0751740 | MtrunA17_Chr5g0440341 | 30.818 | 159 | 89 | 5 | 551 | 690 | 183 | 339 | 2.51e-13 | 72.8 |
Msa0751740 | MtrunA17_Chr7g0254001 | 27.528 | 178 | 102 | 5 | 536 | 690 | 153 | 326 | 1.56e-11 | 67.0 |
Msa0751740 | MtrunA17_Chr3g0106931 | 27.885 | 208 | 139 | 5 | 324 | 521 | 568 | 774 | 6.52e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0751740 | AT5G19330.1 | 76.414 | 725 | 139 | 2 | 8 | 732 | 15 | 707 | 0.0 | 1080 |
Msa0751740 | AT5G19330.2 | 70.517 | 658 | 112 | 6 | 8 | 664 | 15 | 591 | 0.0 | 854 |
Msa0751740 | AT5G13060.1 | 59.297 | 683 | 245 | 3 | 44 | 725 | 77 | 727 | 0.0 | 814 |
Msa0751740 | AT3G06190.5 | 31.013 | 158 | 94 | 2 | 549 | 691 | 182 | 339 | 1.27e-16 | 82.8 |
Msa0751740 | AT3G06190.1 | 31.013 | 158 | 94 | 2 | 549 | 691 | 182 | 339 | 2.27e-16 | 82.4 |
Msa0751740 | AT5G19000.1 | 30.380 | 158 | 95 | 2 | 549 | 691 | 183 | 340 | 5.40e-15 | 78.2 |
Msa0751740 | AT5G19000.3 | 30.380 | 158 | 95 | 2 | 549 | 691 | 183 | 340 | 5.40e-15 | 78.2 |
Msa0751740 | AT3G03740.1 | 31.293 | 147 | 84 | 2 | 560 | 690 | 210 | 355 | 1.78e-14 | 77.0 |
Msa0751740 | AT3G43700.1 | 30.114 | 176 | 103 | 4 | 566 | 723 | 205 | 378 | 8.78e-14 | 74.7 |
Msa0751740 | AT3G43700.3 | 33.566 | 143 | 76 | 3 | 566 | 690 | 205 | 346 | 1.53e-13 | 73.2 |
Msa0751740 | AT3G43700.2 | 33.566 | 143 | 76 | 3 | 566 | 690 | 205 | 346 | 1.75e-13 | 73.2 |
Msa0751740 | AT3G01400.1 | 25.000 | 260 | 179 | 4 | 316 | 563 | 72 | 327 | 8.14e-13 | 70.9 |
Msa0751740 | AT5G58680.1 | 24.303 | 251 | 178 | 3 | 317 | 557 | 71 | 319 | 9.98e-13 | 70.9 |
Msa0751740 | AT1G02690.2 | 23.098 | 368 | 222 | 10 | 38 | 399 | 114 | 426 | 9.71e-12 | 68.6 |
Msa0751740 | AT2G39760.4 | 32.117 | 137 | 81 | 1 | 567 | 691 | 195 | 331 | 3.18e-11 | 65.9 |
Msa0751740 | AT2G39760.3 | 32.117 | 137 | 81 | 1 | 567 | 691 | 195 | 331 | 3.18e-11 | 65.9 |
Msa0751740 | AT2G39760.2 | 32.117 | 137 | 81 | 1 | 567 | 691 | 195 | 331 | 3.28e-11 | 65.9 |
Msa0751740 | AT2G39760.1 | 32.117 | 137 | 81 | 2 | 567 | 691 | 195 | 331 | 3.29e-11 | 66.6 |
Msa0751740 | AT4G02150.1 | 22.917 | 336 | 205 | 9 | 68 | 399 | 139 | 424 | 9.96e-11 | 65.5 |
Find 165 sgRNAs with CRISPR-Local
Find 623 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATAACTTCTTTCTTTATAT+TGG | 0.143559 | 5_2:-5217237 | None:intergenic |
ACTATTCTTGCAGGTCTATT+TGG | 0.171579 | 5_2:+5222443 | Msa0751740:intron |
ATAATGTGCCCGACTTTATT+AGG | 0.176408 | 5_2:+5220678 | Msa0751740:CDS |
TTCTTCTTCTTGATCGTTGA+TGG | 0.205098 | 5_2:+5214814 | Msa0751740:exon |
AAGACCTCCCATCTAATATT+TGG | 0.221622 | 5_2:-5223027 | None:intergenic |
ATAACTTCTTTCTTTATATT+GGG | 0.225357 | 5_2:-5217236 | None:intergenic |
TATTGAAGTGTGAGGTCTTC+TGG | 0.236439 | 5_2:+5223900 | Msa0751740:three_prime_UTR |
TCTTGCAAACGACTAATTAA+TGG | 0.240130 | 5_2:-5224185 | None:intergenic |
CTATTCTTGCAGGTCTATTT+GGG | 0.256343 | 5_2:+5222444 | Msa0751740:intron |
GGAGCCTTGCAACCTGTTAT+TGG | 0.264847 | 5_2:+5217266 | Msa0751740:CDS |
CGATGTTTGATGGTGGTTAT+AGG | 0.270918 | 5_2:+5222709 | Msa0751740:CDS |
CGAAGTGCCCCAAGATAAAA+AGG | 0.288638 | 5_2:-5223434 | None:intergenic |
GAGTTGCTTATTGCACTTCT+TGG | 0.303129 | 5_2:+5221454 | Msa0751740:CDS |
AAGAAAGAAGTTATTCTTGC+TGG | 0.306883 | 5_2:+5217245 | Msa0751740:CDS |
CCTCCGAATGAGACTATTAA+TGG | 0.307802 | 5_2:-5216649 | None:intergenic |
GAGCCAAAGCAACTCGTCTT+TGG | 0.310880 | 5_2:-5221244 | None:intergenic |
TTGAGATTCCAAATATTAGA+TGG | 0.324635 | 5_2:+5223019 | Msa0751740:CDS |
ACAAAGTAATTGCGGATATC+TGG | 0.331538 | 5_2:-5223775 | None:intergenic |
ACAATGAGCTGTTGATGTTC+TGG | 0.335518 | 5_2:-5216558 | None:intergenic |
AGACTAGAAGAGAAGATTAA+TGG | 0.341903 | 5_2:+5220973 | Msa0751740:CDS |
AATGTTACAAATACATCTTT+TGG | 0.342238 | 5_2:+5224300 | Msa0751740:three_prime_UTR |
TGCCCTAAGCAGCAACTTGA+TGG | 0.357336 | 5_2:+5221484 | Msa0751740:CDS |
GAAAGGCCAGAAAAGAAAAC+TGG | 0.357510 | 5_2:+5214859 | Msa0751740:CDS |
GCACCATCAAGTTGCTGCTT+AGG | 0.365309 | 5_2:-5221487 | None:intergenic |
AGTTCATTTGCTTGAATTTG+CGG | 0.367407 | 5_2:+5216839 | Msa0751740:CDS |
ATAAGCTAACCTGCGGTGTT+GGG | 0.368341 | 5_2:-5221576 | None:intergenic |
GCGTGATACAAAATGGATTT+CGG | 0.371798 | 5_2:-5214692 | None:intergenic |
TGAGAGACACATCATCAAAA+AGG | 0.379692 | 5_2:-5223975 | None:intergenic |
CATAACCATCACAATATTGC+AGG | 0.381439 | 5_2:-5224069 | None:intergenic |
TACCTAAGTAATCCAATAAC+AGG | 0.386840 | 5_2:-5217278 | None:intergenic |
GAGAAGAGCGTGATACAAAA+TGG | 0.392779 | 5_2:-5214699 | None:intergenic |
TAATGTGCCCGACTTTATTA+GGG | 0.393063 | 5_2:+5220679 | Msa0751740:CDS |
AGGTGGAATTAAGAGACTTC+AGG | 0.393094 | 5_2:+5220703 | Msa0751740:CDS |
ATTTCTATTGTAGGCAACTA+AGG | 0.395213 | 5_2:+5220927 | Msa0751740:intron |
TGTTGAAGGAGGTGCTGTTC+CGG | 0.396510 | 5_2:+5215172 | Msa0751740:CDS |
CCTCTGGCTTTCAGAGCAAC+AGG | 0.401065 | 5_2:-5217520 | None:intergenic |
TCATATATACATGAAATGAT+TGG | 0.405053 | 5_2:-5224162 | None:intergenic |
AAAGGAAGTGCTTTCGCACT+TGG | 0.408825 | 5_2:+5215272 | Msa0751740:CDS |
TTGCAAGAAAGTTGCGTTGA+TGG | 0.409076 | 5_2:+5224200 | Msa0751740:three_prime_UTR |
CGTTGATGGGCTGGTTATGT+AGG | 0.410546 | 5_2:+5224214 | Msa0751740:three_prime_UTR |
AATTCAAGCAAATGAACTAA+TGG | 0.415099 | 5_2:-5216834 | None:intergenic |
AGAAGAAGAAAGAGTCTAGA+AGG | 0.415451 | 5_2:-5214798 | None:intergenic |
ATTCCAAAGACGAGTTGCTT+TGG | 0.417982 | 5_2:+5221241 | Msa0751740:CDS |
TTTGTTAATGCTCTTACAAA+GGG | 0.418843 | 5_2:+5223793 | Msa0751740:CDS |
AACAGCGTCGCGAGCGTCTC+CGG | 0.425429 | 5_2:-5214930 | None:intergenic |
CACCATCAAGTTGCTGCTTA+GGG | 0.427628 | 5_2:-5221486 | None:intergenic |
GATGTTTGATGGTGGTTATA+GGG | 0.430996 | 5_2:+5222710 | Msa0751740:CDS |
TATACTTTGCTGCAGGTAAA+CGG | 0.436466 | 5_2:+5222637 | Msa0751740:intron |
GGGAGATCTGTGTGTCTTGT+TGG | 0.439720 | 5_2:-5214898 | None:intergenic |
AAATGATGAAAACAAGAATC+AGG | 0.443211 | 5_2:+5216914 | Msa0751740:CDS |
AGCAGCTGATCAATATCTCT+TGG | 0.451044 | 5_2:+5223199 | Msa0751740:CDS |
AAGATCAACAAGATGCTTCA+AGG | 0.451904 | 5_2:-5216592 | None:intergenic |
GCATTTCGTGCGATGTTTGA+TGG | 0.452560 | 5_2:+5222699 | Msa0751740:CDS |
AGACAGAGTCATAGCTTTGT+TGG | 0.455185 | 5_2:-5221530 | None:intergenic |
TTCTCAACCTCATGTTCAAA+CGG | 0.455309 | 5_2:-5215251 | None:intergenic |
TATAAGCTAACCTGCGGTGT+TGG | 0.455337 | 5_2:-5221577 | None:intergenic |
GAGCGTCTCCGGTGAGAGGA+AGG | 0.456477 | 5_2:-5214919 | None:intergenic |
AGGGAAGCAGCATTGTTACT+TGG | 0.456874 | 5_2:+5217540 | Msa0751740:CDS |
CTTTGTTAATGCTCTTACAA+AGG | 0.457464 | 5_2:+5223792 | Msa0751740:CDS |
GGTTGGTGTGATCGGAAATC+TGG | 0.460311 | 5_2:+5217202 | Msa0751740:intron |
TGCATTGGGGAGATTGGCAC+AGG | 0.469390 | 5_2:+5218237 | Msa0751740:CDS |
CATATATACATGAAATGATT+GGG | 0.471613 | 5_2:-5224161 | None:intergenic |
GCAGTATTAAAACCCGTGTC+AGG | 0.472418 | 5_2:+5216709 | Msa0751740:CDS |
CGTTGGAAGAGAAAGAAGAA+AGG | 0.473183 | 5_2:-5214985 | None:intergenic |
CTCTCATAAGATATAACAAA+TGG | 0.473224 | 5_2:-5221205 | None:intergenic |
AATTGCAAAGCAAAATCGAT+TGG | 0.477225 | 5_2:-5224110 | None:intergenic |
CTTATTAATCTATTCTAATG+AGG | 0.480099 | 5_2:+5217482 | Msa0751740:CDS |
TTTGAACATGAGGTTGAGAA+AGG | 0.487812 | 5_2:+5215254 | Msa0751740:CDS |
AGCGTGAGTGGCGCGTTTAG+CGG | 0.492689 | 5_2:-5215023 | None:intergenic |
GCCGTTGCCGTTTGAACATG+AGG | 0.493881 | 5_2:+5215244 | Msa0751740:CDS |
ACCTGCGGTGTTGGGGATGG+AGG | 0.501253 | 5_2:-5221568 | None:intergenic |
ATGAATTAGGTTGGTGTGAT+CGG | 0.502788 | 5_2:+5217194 | Msa0751740:intron |
AAGAGTTAGATATGTGTGAG+AGG | 0.503138 | 5_2:-5214722 | None:intergenic |
GTAACAATGCTGCTTCCCTC+TGG | 0.503185 | 5_2:-5217536 | None:intergenic |
GATAAATTAAGTGAAACGCC+AGG | 0.505997 | 5_2:+5223456 | Msa0751740:CDS |
TGCTGTGGCTTTATTCAAGT+TGG | 0.507707 | 5_2:+5221507 | Msa0751740:CDS |
TCTCAATGATGTAGCATTGA+AGG | 0.508118 | 5_2:-5223400 | None:intergenic |
GATGGAGGAGCAGCATCTAC+AGG | 0.508182 | 5_2:-5221553 | None:intergenic |
TTGTCCAGATTTATCTACAC+TGG | 0.508615 | 5_2:+5223134 | Msa0751740:intron |
GACTGAAGCATTTCTATCAA+AGG | 0.509946 | 5_2:-5218181 | None:intergenic |
AGAAAGTTGCGTTGATGGGC+TGG | 0.509953 | 5_2:+5224205 | Msa0751740:three_prime_UTR |
GTTAGAAATCACTAATAGAA+TGG | 0.511631 | 5_2:-5223844 | None:intergenic |
TAACTTCTTTCTTTATATTG+GGG | 0.511680 | 5_2:-5217235 | None:intergenic |
TTATGGCCTTGCAGAGAATG+AGG | 0.514595 | 5_2:+5220546 | Msa0751740:CDS |
ATTGCAAAGCAAAATCGATT+GGG | 0.516866 | 5_2:-5224109 | None:intergenic |
ATTGTGAATGTGATTGTTGA+AGG | 0.518214 | 5_2:+5215158 | Msa0751740:CDS |
AGAATGGCACATGCTACGCC+TGG | 0.518489 | 5_2:-5223828 | None:intergenic |
TGAAGATGTTTAATCAAAGC+CGG | 0.521442 | 5_2:-5215191 | None:intergenic |
GAGCAACAGGAGCTGTTACA+TGG | 0.525581 | 5_2:-5217507 | None:intergenic |
AGAGTTAGATATGTGTGAGA+GGG | 0.526058 | 5_2:-5214721 | None:intergenic |
CCCGACTTTATTAGGGTAGG+TGG | 0.526816 | 5_2:+5220686 | Msa0751740:CDS |
AACTTCTTTCTTTATATTGG+GGG | 0.527300 | 5_2:-5217234 | None:intergenic |
TGCAAGAAAGTTGCGTTGAT+GGG | 0.530390 | 5_2:+5224201 | Msa0751740:three_prime_UTR |
CGAAGCATCAAAATCAGAGT+TGG | 0.530641 | 5_2:-5217053 | None:intergenic |
CTAACCTGCGGTGTTGGGGA+TGG | 0.534564 | 5_2:-5221571 | None:intergenic |
GTGCCATTAATAGTCTCATT+CGG | 0.535005 | 5_2:+5216646 | Msa0751740:CDS |
ATCAAAATATACAGCTGAGA+AGG | 0.536118 | 5_2:+5217455 | Msa0751740:CDS |
TGAGATTCCAAATATTAGAT+GGG | 0.536128 | 5_2:+5223020 | Msa0751740:CDS |
ACTTGGACTTCTTGCTGTCA+AGG | 0.539215 | 5_2:+5215289 | Msa0751740:CDS |
AAGATCAGCGAGAGCGTGAG+TGG | 0.542909 | 5_2:-5215035 | None:intergenic |
TCCTCCATCCCCAACACCGC+AGG | 0.546729 | 5_2:+5221567 | Msa0751740:CDS |
TCTTATGAGAGTTTCTGAAA+AGG | 0.548033 | 5_2:+5221217 | Msa0751740:CDS |
AAAGTGCAAAGAGCAGCTGC+TGG | 0.552402 | 5_2:+5216867 | Msa0751740:CDS |
CTACCATCATCAGAAAAGAA+AGG | 0.554256 | 5_2:+5214842 | Msa0751740:CDS |
ATTCTTGCAGGTCTATTTGG+GGG | 0.558381 | 5_2:+5222446 | Msa0751740:intron |
GCTGATCAATATCTCTTGGA+AGG | 0.559023 | 5_2:+5223203 | Msa0751740:CDS |
TAATCCAATAACAGGTTGCA+AGG | 0.560106 | 5_2:-5217270 | None:intergenic |
TCCACCTACCCTAATAAAGT+CGG | 0.563567 | 5_2:-5220687 | None:intergenic |
AAAGGGGAACTCCAACATCC+AGG | 0.564270 | 5_2:+5223810 | Msa0751740:CDS |
TTGAAGAAGCAAACCTGACA+CGG | 0.565682 | 5_2:-5216722 | None:intergenic |
TCGCGAGCGTCTCCGGTGAG+AGG | 0.565708 | 5_2:-5214923 | None:intergenic |
TAAGCTAACCTGCGGTGTTG+GGG | 0.566863 | 5_2:-5221575 | None:intergenic |
GAACAGACACCACTTGGTGT+TGG | 0.568883 | 5_2:-5223953 | None:intergenic |
CAGATCTCCCTTCCTCTCAC+CGG | 0.570009 | 5_2:+5214911 | Msa0751740:CDS |
TCAATGTGTAGGACGGAAGG+TGG | 0.574901 | 5_2:+5216804 | Msa0751740:intron |
CACATGCTACGCCTGGATGT+TGG | 0.577907 | 5_2:-5223821 | None:intergenic |
ATCTCAATGTGTAGGACGGA+AGG | 0.578215 | 5_2:+5216801 | Msa0751740:intron |
CCACCTACCCTAATAAAGTC+GGG | 0.579855 | 5_2:-5220686 | None:intergenic |
TCAAGCAAATGAACTAATGG+TGG | 0.580125 | 5_2:-5216831 | None:intergenic |
CAGAGTGTGCAATACCAGCT+TGG | 0.580983 | 5_2:-5220450 | None:intergenic |
GAGCATTAACAAAGTAATTG+CGG | 0.581468 | 5_2:-5223783 | None:intergenic |
ATCTTACCTCATTCTCTGCA+AGG | 0.582750 | 5_2:-5220552 | None:intergenic |
CAGATTTATCTACACTGGAT+CGG | 0.583274 | 5_2:+5223139 | Msa0751740:intron |
AACCTGTTATTGGATTACTT+AGG | 0.584287 | 5_2:+5217276 | Msa0751740:CDS |
ACCTCATGTTCAAACGGCAA+CGG | 0.585671 | 5_2:-5215245 | None:intergenic |
TGCTGGTGCATTACGAACCC+TGG | 0.590945 | 5_2:+5216884 | Msa0751740:CDS |
TGCTGCTATTCATTATGAAG+CGG | 0.591200 | 5_2:+5217085 | Msa0751740:CDS |
AGCGTCTCCGGTGAGAGGAA+GGG | 0.595419 | 5_2:-5214918 | None:intergenic |
CAGGATACACATAACCAAGC+TGG | 0.595987 | 5_2:+5220436 | Msa0751740:intron |
AGAGATATTGATCAGCTGCT+CGG | 0.596163 | 5_2:-5223196 | None:intergenic |
TATTCTTGCAGGTCTATTTG+GGG | 0.597088 | 5_2:+5222445 | Msa0751740:intron |
ATGTTATTTATTGAAGTGTG+AGG | 0.599971 | 5_2:+5223892 | Msa0751740:three_prime_UTR |
GAGTCAAGAAGCTTCAGTAG+TGG | 0.600458 | 5_2:-5220484 | None:intergenic |
GGAAGCTCTATCGAATTCGT+TGG | 0.603823 | 5_2:-5215002 | None:intergenic |
CCATTAATAGTCTCATTCGG+AGG | 0.607900 | 5_2:+5216649 | Msa0751740:CDS |
TGAACAGAATCATGTTGAGT+CGG | 0.610099 | 5_2:-5215218 | None:intergenic |
CAAGCTGGTATTGCACACTC+TGG | 0.611889 | 5_2:+5220451 | Msa0751740:CDS |
ATAAATTAAGTGAAACGCCA+GGG | 0.613914 | 5_2:+5223457 | Msa0751740:CDS |
GCTGGTATTGCACACTCTGG+CGG | 0.620004 | 5_2:+5220454 | Msa0751740:CDS |
TGAAGAAGCAAACCTGACAC+GGG | 0.621585 | 5_2:-5216721 | None:intergenic |
AGCGACTGATTCAGACTGCA+AGG | 0.623102 | 5_2:+5217572 | Msa0751740:CDS |
CTTCTGGATTCAGAACAACA+TGG | 0.630887 | 5_2:+5223916 | Msa0751740:three_prime_UTR |
AAAATATTTATTGACCACAA+TGG | 0.632774 | 5_2:+5221299 | Msa0751740:CDS |
ATGTGAATACACGATTGCAC+AGG | 0.633277 | 5_2:+5223238 | Msa0751740:CDS |
AGGTCTTTGAGCTTATGATG+AGG | 0.635524 | 5_2:+5223043 | Msa0751740:CDS |
GCAGCAACTTGATGGTGCTG+TGG | 0.639343 | 5_2:+5221492 | Msa0751740:CDS |
ATAACCATCACAATATTGCA+GGG | 0.639664 | 5_2:-5224068 | None:intergenic |
CTGTTGCTCTGAAAGCCAGA+GGG | 0.641542 | 5_2:+5217521 | Msa0751740:CDS |
AAGAAATGTCCAACACCAAG+TGG | 0.642397 | 5_2:+5223944 | Msa0751740:three_prime_UTR |
CATTAATAGTCTCATTCGGA+GGG | 0.643003 | 5_2:+5216650 | Msa0751740:CDS |
GATTCCAAATATTAGATGGG+AGG | 0.643347 | 5_2:+5223023 | Msa0751740:CDS |
TAGGAACATGCATACCATTG+TGG | 0.645222 | 5_2:-5221313 | None:intergenic |
CCTGTTGCTCTGAAAGCCAG+AGG | 0.647880 | 5_2:+5217520 | Msa0751740:CDS |
GGAATTAAGAGACTTCAGGA+TGG | 0.648542 | 5_2:+5220707 | Msa0751740:CDS |
CTGATCAATATCTCTTGGAA+GGG | 0.649009 | 5_2:+5223204 | Msa0751740:CDS |
GTGAATGTGATTGTTGAAGG+AGG | 0.650417 | 5_2:+5215161 | Msa0751740:CDS |
TTTCGTGCGATGTTTGATGG+TGG | 0.657371 | 5_2:+5222702 | Msa0751740:CDS |
ACAGAATCATGTTGAGTCGG+CGG | 0.661283 | 5_2:-5215215 | None:intergenic |
CAATGTGTAGGACGGAAGGT+GGG | 0.662821 | 5_2:+5216805 | Msa0751740:intron |
TTGTTAATGCTCTTACAAAG+GGG | 0.666782 | 5_2:+5223794 | Msa0751740:CDS |
TAGGTTCACATTGTACAGAG+AGG | 0.672210 | 5_2:+5218148 | Msa0751740:intron |
GTGCCCGACTTTATTAGGGT+AGG | 0.672496 | 5_2:+5220683 | Msa0751740:CDS |
TGAAACGTGTTGATTGACGT+CGG | 0.679095 | 5_2:-5214957 | None:intergenic |
GATATTGATCAGCTGCTCGG+AGG | 0.684516 | 5_2:-5223193 | None:intergenic |
CAACAGCTCATTGTAGACAG+TGG | 0.700521 | 5_2:+5216567 | Msa0751740:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAGTAAATTGTTAAAATATA+AGG | + | chr5_2:5216053-5216072 | Msa0751740:intron | 10.0% |
!! | ATTATATTATTAGATTATTC+AGG | + | chr5_2:5216286-5216305 | Msa0751740:intron | 10.0% |
!!! | TAATTTTGTAACAAAAAATT+CGG | - | chr5_2:5218584-5218603 | None:intergenic | 10.0% |
!!! | ATTAAGATTATGTTTTTTAT+GGG | - | chr5_2:5218640-5218659 | None:intergenic | 10.0% |
!!! | TATTAAGATTATGTTTTTTA+TGG | - | chr5_2:5218641-5218660 | None:intergenic | 10.0% |
!!! | TTTTTTGTTTAATGAATTAA+TGG | - | chr5_2:5219102-5219121 | None:intergenic | 10.0% |
!! | AAAATATTGTCAAAAAAAAA+AGG | + | chr5_2:5219308-5219327 | Msa0751740:intron | 10.0% |
!! | AAAATATTGTCAAAAAAAAA+AGG | + | chr5_2:5219308-5219327 | Msa0751740:intron | 10.0% |
!! | TTTCTTATAAATTGATTAAT+AGG | + | chr5_2:5223562-5223581 | Msa0751740:intron | 10.0% |
!! | ATTATAGATATTAATTAACA+AGG | + | chr5_2:5223695-5223714 | Msa0751740:intron | 10.0% |
!! | ACTAAAACAAAAAATTTATA+GGG | - | chr5_2:5224343-5224362 | None:intergenic | 10.0% |
!! | TACTAAAACAAAAAATTTAT+AGG | - | chr5_2:5224344-5224363 | None:intergenic | 10.0% |
!! | CAAAAATTAACTTAAAAATA+AGG | - | chr5_2:5224426-5224445 | None:intergenic | 10.0% |
!!! | AAAAATTGTATTTTTTTTCT+AGG | - | chr5_2:5224502-5224521 | None:intergenic | 10.0% |
!! | TATAGTAGAAAATAAGATTT+AGG | + | chr5_2:5215567-5215586 | Msa0751740:intron | 15.0% |
!!! | GAAGATATTTTTTTTTTTGA+AGG | + | chr5_2:5215609-5215628 | Msa0751740:intron | 15.0% |
!! | TAATTAGTTGTATCAAAATA+TGG | + | chr5_2:5215744-5215763 | Msa0751740:intron | 15.0% |
!! | AAATTATGAGTATTTCAAAA+AGG | - | chr5_2:5216141-5216160 | None:intergenic | 15.0% |
!!! | TTTGAAATACTCATAATTTT+AGG | + | chr5_2:5216142-5216161 | Msa0751740:intron | 15.0% |
!!! | TTGAAATACTCATAATTTTA+GGG | + | chr5_2:5216143-5216162 | Msa0751740:intron | 15.0% |
!! | AAAAGTAAATTTCATTAGTA+TGG | - | chr5_2:5216754-5216773 | None:intergenic | 15.0% |
!! | ATAAACTTTAATGATATATG+AGG | + | chr5_2:5216970-5216989 | Msa0751740:intron | 15.0% |
!! | GAATTAAGAATCTATAATTA+AGG | - | chr5_2:5217125-5217144 | None:intergenic | 15.0% |
!! | ATAACTTCTTTCTTTATATT+GGG | - | chr5_2:5217239-5217258 | None:intergenic | 15.0% |
!! | AATAACTTCTTTCTTTATAT+TGG | - | chr5_2:5217240-5217259 | None:intergenic | 15.0% |
!!! | TTATTATTTTGGTTTTTCTT+AGG | + | chr5_2:5217832-5217851 | Msa0751740:intron | 15.0% |
!!! | ATTTAAATTTGTTACAAACA+GGG | - | chr5_2:5218789-5218808 | None:intergenic | 15.0% |
!!! | TATTTAAATTTGTTACAAAC+AGG | - | chr5_2:5218790-5218809 | None:intergenic | 15.0% |
!! | TTGACATTTAAAAATTATAC+TGG | + | chr5_2:5218886-5218905 | Msa0751740:intron | 15.0% |
!! | TAACTTTCAAAAATAATGTT+TGG | + | chr5_2:5218913-5218932 | Msa0751740:intron | 15.0% |
!!! | ATTTGTTAAGAAAAAATTGA+AGG | - | chr5_2:5219014-5219033 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTTAGAGAAACA+CGG | + | chr5_2:5219155-5219174 | Msa0751740:intron | 15.0% |
!! | AAAAAAAAGGCAAAAAAAAA+AGG | + | chr5_2:5219385-5219404 | Msa0751740:intron | 15.0% |
!!! | CCTTATTTATTAATTTTGTT+AGG | - | chr5_2:5219530-5219549 | None:intergenic | 15.0% |
!! | CCTAACAAAATTAATAAATA+AGG | + | chr5_2:5219527-5219546 | Msa0751740:intron | 15.0% |
!!! | ATAGTTTAAGATTAATAGAA+TGG | + | chr5_2:5219697-5219716 | Msa0751740:intron | 15.0% |
!! | ACATAAAATTTAATATCTTC+AGG | - | chr5_2:5220416-5220435 | None:intergenic | 15.0% |
!!! | AAGATATTAAATTTTATGTC+AGG | + | chr5_2:5220417-5220436 | Msa0751740:intron | 15.0% |
!! | TAAAACACATAAATTAACTT+TGG | - | chr5_2:5220644-5220663 | None:intergenic | 15.0% |
!! | ATTTATAACTGATAAAGTAA+TGG | - | chr5_2:5221083-5221102 | None:intergenic | 15.0% |
!!! | ATCATCATTGATTAAATTTT+TGG | + | chr5_2:5221867-5221886 | Msa0751740:intron | 15.0% |
!!! | TCATCATTGATTAAATTTTT+GGG | + | chr5_2:5221868-5221887 | Msa0751740:intron | 15.0% |
!! | CAGCATTAAAAAAAAAATTA+GGG | - | chr5_2:5222058-5222077 | None:intergenic | 15.0% |
!! | ATATGCTACATTTAATTAAT+TGG | + | chr5_2:5222324-5222343 | Msa0751740:intron | 15.0% |
!!! | TAGTGATTGAAAATTTTATA+GGG | - | chr5_2:5224395-5224414 | None:intergenic | 15.0% |
!! | TGACATAAGTAAAATAATAG+TGG | - | chr5_2:5215326-5215345 | None:intergenic | 20.0% |
!! | AGTACAAAAAGTAAATCAAA+TGG | + | chr5_2:5215658-5215677 | Msa0751740:intron | 20.0% |
!! | ATCATAAGTGGTTAAATATA+AGG | + | chr5_2:5216085-5216104 | Msa0751740:intron | 20.0% |
!!! | TTATTAGATTATTCAGGTTA+AGG | + | chr5_2:5216292-5216311 | Msa0751740:intron | 20.0% |
!!! | TATTAGATTATTCAGGTTAA+GGG | + | chr5_2:5216293-5216312 | Msa0751740:intron | 20.0% |
!!! | TTTTTAAAAAAGAAACTGTG+GGG | - | chr5_2:5216331-5216350 | None:intergenic | 20.0% |
!!! | GTTTTTAAAAAAGAAACTGT+GGG | - | chr5_2:5216332-5216351 | None:intergenic | 20.0% |
!! | CACAAAATTTGTATTTGTTT+CGG | + | chr5_2:5216385-5216404 | Msa0751740:intron | 20.0% |
!!! | CAAACAAAATAGTTAGTTTA+GGG | - | chr5_2:5216523-5216542 | None:intergenic | 20.0% |
!! | TAACTTCTTTCTTTATATTG+GGG | - | chr5_2:5217238-5217257 | None:intergenic | 20.0% |
!!! | ATAATATCAATACAAGTTGA+GGG | - | chr5_2:5217372-5217391 | None:intergenic | 20.0% |
!! | CTTATTAATCTATTCTAATG+AGG | + | chr5_2:5217482-5217501 | Msa0751740:CDS | 20.0% |
!!! | TTACTTTTTTCTGAATAGTT+AGG | + | chr5_2:5217692-5217711 | Msa0751740:intron | 20.0% |
!!! | GCTGTTAAGTATTATTATTT+TGG | + | chr5_2:5217821-5217840 | Msa0751740:intron | 20.0% |
!!! | TTTTGGAATAATTGAGTTTT+GGG | + | chr5_2:5217897-5217916 | Msa0751740:intron | 20.0% |
!! | AGAAATAATTCCTAGAATAA+TGG | - | chr5_2:5218053-5218072 | None:intergenic | 20.0% |
!!! | ATTATTTCTTTCTCAAAGAA+AGG | + | chr5_2:5218064-5218083 | Msa0751740:intron | 20.0% |
!! | AGAAGATAAGAATTAAATTC+TGG | - | chr5_2:5218111-5218130 | None:intergenic | 20.0% |
!! | AATAACATGAAAAAAGACAA+AGG | - | chr5_2:5218274-5218293 | None:intergenic | 20.0% |
!!! | TTAGATTTTTTTTTAGATCC+TGG | + | chr5_2:5218682-5218701 | Msa0751740:intron | 20.0% |
!!! | TATTGGTTTTTTTTAAAACC+AGG | - | chr5_2:5218703-5218722 | None:intergenic | 20.0% |
!! | TAACAAATGAAAATTTACCA+CGG | + | chr5_2:5219127-5219146 | Msa0751740:intron | 20.0% |
!! | TAAAAAAAAAAACTAAACCG+TGG | - | chr5_2:5219147-5219166 | None:intergenic | 20.0% |
!! | ATGAAGTAAAAAGATGTTTA+AGG | - | chr5_2:5219562-5219581 | None:intergenic | 20.0% |
!! | ATCTTAAACTATTCACTAAT+GGG | - | chr5_2:5219689-5219708 | None:intergenic | 20.0% |
!! | AATCTTAAACTATTCACTAA+TGG | - | chr5_2:5219690-5219709 | None:intergenic | 20.0% |
!! | TAAGATTAATAGAATGGAAT+AGG | + | chr5_2:5219703-5219722 | Msa0751740:intron | 20.0% |
!! | AAGATTAATAGAATGGAATA+GGG | + | chr5_2:5219704-5219723 | Msa0751740:intron | 20.0% |
!!! | TTTCAATAAAGTAGCTTTAT+AGG | - | chr5_2:5219980-5219999 | None:intergenic | 20.0% |
!! | TGAAAAAAAAGAATAAGAAG+CGG | + | chr5_2:5219995-5220014 | Msa0751740:intron | 20.0% |
!! | CACTTAATTTAATGCTTTAA+AGG | - | chr5_2:5220263-5220282 | None:intergenic | 20.0% |
!! | ATTAAAGAGATAAACTTACT+TGG | - | chr5_2:5220745-5220764 | None:intergenic | 20.0% |
!! | TCATTATACTGTAATTAACA+TGG | + | chr5_2:5221043-5221062 | Msa0751740:intron | 20.0% |
!! | TTTGATCATAATATGAACTT+TGG | - | chr5_2:5221148-5221167 | None:intergenic | 20.0% |
!! | TCTATTAATATTCTCTTTGT+AGG | + | chr5_2:5221175-5221194 | Msa0751740:intron | 20.0% |
!!! | GGTCAATAAATATTTTTTTC+TGG | - | chr5_2:5221295-5221314 | None:intergenic | 20.0% |
!! | AAAATATTTATTGACCACAA+TGG | + | chr5_2:5221299-5221318 | Msa0751740:CDS | 20.0% |
!!! | TGTCTATAAAATCCTTTTTA+TGG | + | chr5_2:5221374-5221393 | Msa0751740:intron | 20.0% |
!! | AATGATGATAAGATTCAAAT+GGG | - | chr5_2:5221856-5221875 | None:intergenic | 20.0% |
!! | CCAGCATTAAAAAAAAAATT+AGG | - | chr5_2:5222059-5222078 | None:intergenic | 20.0% |
!!! | CCTAATTTTTTTTTTAATGC+TGG | + | chr5_2:5222056-5222075 | Msa0751740:intron | 20.0% |
!!! | TTTATTTTTTACAACCACAA+TGG | + | chr5_2:5222183-5222202 | Msa0751740:intron | 20.0% |
!! | TGAGAATTAAACGATATATA+TGG | - | chr5_2:5222538-5222557 | None:intergenic | 20.0% |
!!! | AATAAAGGAGTTTTGTTTTT+TGG | - | chr5_2:5222789-5222808 | None:intergenic | 20.0% |
!!! | GAAAGTATTAAAACCAAAAT+AGG | - | chr5_2:5222845-5222864 | None:intergenic | 20.0% |
!! | AAAGAATTGTATATCAATCA+AGG | - | chr5_2:5222967-5222986 | None:intergenic | 20.0% |
!! | TTTGATTCTAATATTAGTTC+AGG | - | chr5_2:5223300-5223319 | None:intergenic | 20.0% |
!!! | TCAATATATGGATTCATTTT+AGG | - | chr5_2:5223619-5223638 | None:intergenic | 20.0% |
!!! | TGAGTTTATGATTTTGTTAT+AGG | + | chr5_2:5224135-5224154 | Msa0751740:three_prime_UTR | 20.0% |
!! | CATATATACATGAAATGATT+GGG | - | chr5_2:5224164-5224183 | None:intergenic | 20.0% |
!! | TCATATATACATGAAATGAT+TGG | - | chr5_2:5224165-5224184 | None:intergenic | 20.0% |
!!! | GCTTTTTTATTTTTTGACAA+AGG | + | chr5_2:5224236-5224255 | Msa0751740:three_prime_UTR | 20.0% |
!!! | AATGTTACAAATACATCTTT+TGG | + | chr5_2:5224300-5224319 | Msa0751740:three_prime_UTR | 20.0% |
!!! | CTTTTGGTTAAATATGTTTT+TGG | + | chr5_2:5224316-5224335 | Msa0751740:three_prime_UTR | 20.0% |
!!! | GTAGTGATTGAAAATTTTAT+AGG | - | chr5_2:5224396-5224415 | None:intergenic | 20.0% |
!!! | AAATTTTCAATCACTACTTT+TGG | + | chr5_2:5224399-5224418 | Msa0751740:three_prime_UTR | 20.0% |
!! | TTTTATGTGATGCAAAACTA+TGG | + | chr5_2:5215390-5215409 | Msa0751740:intron | 25.0% |
! | GAATTAGAAACGACAATATT+AGG | + | chr5_2:5215523-5215542 | Msa0751740:intron | 25.0% |
! | AGTAGAAAATAAGATTTAGG+TGG | + | chr5_2:5215570-5215589 | Msa0751740:intron | 25.0% |
! | AAAATAAGATTTAGGTGGTT+TGG | + | chr5_2:5215575-5215594 | Msa0751740:intron | 25.0% |
! | AAATAAGATTTAGGTGGTTT+GGG | + | chr5_2:5215576-5215595 | Msa0751740:intron | 25.0% |
! | ACAAAAAGTAAATCAAATGG+AGG | + | chr5_2:5215661-5215680 | Msa0751740:intron | 25.0% |
!! | TGTGTTTCTAATTTGAAATG+TGG | + | chr5_2:5216252-5216271 | Msa0751740:intron | 25.0% |
!! | GTGTTTCTAATTTGAAATGT+GGG | + | chr5_2:5216253-5216272 | Msa0751740:intron | 25.0% |
!! | ATTAGATTATTCAGGTTAAG+GGG | + | chr5_2:5216294-5216313 | Msa0751740:intron | 25.0% |
!!! | GGTTTTTAAAAAAGAAACTG+TGG | - | chr5_2:5216333-5216352 | None:intergenic | 25.0% |
! | TAATATGTAGAATGATTCCT+TGG | + | chr5_2:5216492-5216511 | Msa0751740:intron | 25.0% |
!! | CCAAACAAAATAGTTAGTTT+AGG | - | chr5_2:5216524-5216543 | None:intergenic | 25.0% |
!! | CCTAAACTAACTATTTTGTT+TGG | + | chr5_2:5216521-5216540 | Msa0751740:intron | 25.0% |
! | AATTCAAGCAAATGAACTAA+TGG | - | chr5_2:5216837-5216856 | None:intergenic | 25.0% |
!!! | TTCATCATTTTTAAAAGCCA+GGG | - | chr5_2:5216904-5216923 | None:intergenic | 25.0% |
!!! | TTTCATCATTTTTAAAAGCC+AGG | - | chr5_2:5216905-5216924 | None:intergenic | 25.0% |
! | AAATGATGAAAACAAGAATC+AGG | + | chr5_2:5216914-5216933 | Msa0751740:CDS | 25.0% |
! | AACTTCTTTCTTTATATTGG+GGG | - | chr5_2:5217237-5217256 | None:intergenic | 25.0% |
! | CATAATATCAATACAAGTTG+AGG | - | chr5_2:5217373-5217392 | None:intergenic | 25.0% |
! | AAGATTATTGCCATCAAAAA+AGG | - | chr5_2:5217430-5217449 | None:intergenic | 25.0% |
! | TAAAACTATACACCTAAGTT+TGG | + | chr5_2:5217620-5217639 | Msa0751740:intron | 25.0% |
!! | CATAATTCAACATTTGAAGT+TGG | - | chr5_2:5217670-5217689 | None:intergenic | 25.0% |
! | GATATAGAGTATAGGATAAT+TGG | + | chr5_2:5217741-5217760 | Msa0751740:intron | 25.0% |
!!! | CTTTTGGAATAATTGAGTTT+TGG | + | chr5_2:5217896-5217915 | Msa0751740:intron | 25.0% |
! | ATTGAAAGAGAAGATACAAA+AGG | - | chr5_2:5217964-5217983 | None:intergenic | 25.0% |
! | TTAAGATTGTAAGCAAATGA+AGG | - | chr5_2:5218008-5218027 | None:intergenic | 25.0% |
!!! | TGTTTTTACACCATTATTCT+AGG | + | chr5_2:5218040-5218059 | Msa0751740:intron | 25.0% |
!!! | AGATTATGTTTTTTATGGGA+GGG | - | chr5_2:5218636-5218655 | None:intergenic | 25.0% |
!!! | AAGATTATGTTTTTTATGGG+AGG | - | chr5_2:5218637-5218656 | None:intergenic | 25.0% |
!! | GCATTATTTCACTTTGTTAT+TGG | - | chr5_2:5218720-5218739 | None:intergenic | 25.0% |
! | AAAAAAAAAGGCAAGATGAT+AGG | + | chr5_2:5219397-5219416 | Msa0751740:intron | 25.0% |
!!! | TTTTTTAGATGGAATTTGTC+AGG | + | chr5_2:5219441-5219460 | Msa0751740:intron | 25.0% |
!! | AAACATCTTTTTACTTCATC+AGG | + | chr5_2:5219563-5219582 | Msa0751740:intron | 25.0% |
! | TCTTAAACTATTCACTAATG+GGG | - | chr5_2:5219688-5219707 | None:intergenic | 25.0% |
! | AAATTAAATCATTGAGTCGT+GGG | + | chr5_2:5219825-5219844 | Msa0751740:intron | 25.0% |
! | ATTGGAAACATTGCAAATTA+TGG | + | chr5_2:5219925-5219944 | Msa0751740:intron | 25.0% |
! | TTGGAAACATTGCAAATTAT+GGG | + | chr5_2:5219926-5219945 | Msa0751740:intron | 25.0% |
!!! | GTAGCTTTATAGGTTATTAA+GGG | - | chr5_2:5219970-5219989 | None:intergenic | 25.0% |
!!! | AGTAGCTTTATAGGTTATTA+AGG | - | chr5_2:5219971-5219990 | None:intergenic | 25.0% |
! | GCATAAAACTTGAATCTAAA+AGG | - | chr5_2:5220332-5220351 | None:intergenic | 25.0% |
! | AGTTTATCTCTTTAATACCT+AGG | + | chr5_2:5220749-5220768 | Msa0751740:intron | 25.0% |
! | CATTTAATTCCCAATGATAT+AGG | - | chr5_2:5220819-5220838 | None:intergenic | 25.0% |
! | CATTGGGAATTAAATGATAT+TGG | + | chr5_2:5220823-5220842 | Msa0751740:intron | 25.0% |
!!! | ATGCTATTGATTTCTATTGT+AGG | + | chr5_2:5220918-5220937 | Msa0751740:intron | 25.0% |
! | TACAGTATAATGAGTAAACT+CGG | - | chr5_2:5221036-5221055 | None:intergenic | 25.0% |
! | TAATTAACATGGAAATGACA+TGG | + | chr5_2:5221054-5221073 | Msa0751740:intron | 25.0% |
!!! | ACTTTGGAACTTATAGAATA+AGG | - | chr5_2:5221132-5221151 | None:intergenic | 25.0% |
! | CTCTCATAAGATATAACAAA+TGG | - | chr5_2:5221208-5221227 | None:intergenic | 25.0% |
!!! | ATACAATTTGCTTTTTCTTC+AGG | + | chr5_2:5221599-5221618 | Msa0751740:intron | 25.0% |
!!! | TACAATTTGCTTTTTCTTCA+GGG | + | chr5_2:5221600-5221619 | Msa0751740:intron | 25.0% |
!!! | TACTTGTACATGATGTTTTT+TGG | + | chr5_2:5221694-5221713 | Msa0751740:intron | 25.0% |
! | ATTTCCTTTATCTTTCTCAA+TGG | + | chr5_2:5221727-5221746 | Msa0751740:intron | 25.0% |
!!! | AACTTTGTTTCTTCTGATTT+TGG | + | chr5_2:5221758-5221777 | Msa0751740:intron | 25.0% |
! | CAATGATGATAAGATTCAAA+TGG | - | chr5_2:5221857-5221876 | None:intergenic | 25.0% |
! | CAAAAATAGAAATGTTGCAT+TGG | + | chr5_2:5221930-5221949 | Msa0751740:intron | 25.0% |
! | CAAAATTAGTAGGTTTACAT+TGG | - | chr5_2:5222010-5222029 | None:intergenic | 25.0% |
!! | CAATGTAAACCTACTAATTT+TGG | + | chr5_2:5222008-5222027 | Msa0751740:intron | 25.0% |
! | TTAAGGAAACCAAAATTAGT+AGG | - | chr5_2:5222020-5222039 | None:intergenic | 25.0% |
!! | ATATTTATCACCTCCTATTT+TGG | + | chr5_2:5222829-5222848 | Msa0751740:intron | 25.0% |
! | AGTATTAAAACCAAAATAGG+AGG | - | chr5_2:5222842-5222861 | None:intergenic | 25.0% |
!! | CAATTCTTTTACTCTATTAC+AGG | + | chr5_2:5222978-5222997 | Msa0751740:intron | 25.0% |
! | TTGAGATTCCAAATATTAGA+TGG | + | chr5_2:5223019-5223038 | Msa0751740:CDS | 25.0% |
! | TGAGATTCCAAATATTAGAT+GGG | + | chr5_2:5223020-5223039 | Msa0751740:CDS | 25.0% |
! | AATCATTACAAACTTCCATA+AGG | - | chr5_2:5223083-5223102 | None:intergenic | 25.0% |
! | TGACAAAAAATCAAGTAATG+AGG | - | chr5_2:5223331-5223350 | None:intergenic | 25.0% |
! | ATCCATATATTGAAAGTTTC+TGG | + | chr5_2:5223626-5223645 | Msa0751740:intron | 25.0% |
! | GGTCTAAAAGAAAATTATAC+AGG | + | chr5_2:5223671-5223690 | Msa0751740:intron | 25.0% |
! | TTTGTTAATGCTCTTACAAA+GGG | + | chr5_2:5223793-5223812 | Msa0751740:CDS | 25.0% |
! | GTTAGAAATCACTAATAGAA+TGG | - | chr5_2:5223847-5223866 | None:intergenic | 25.0% |
!! | ATGTTATTTATTGAAGTGTG+AGG | + | chr5_2:5223892-5223911 | Msa0751740:three_prime_UTR | 25.0% |
! | AAAAAAAACAATGTTCGTGA+AGG | - | chr5_2:5224041-5224060 | None:intergenic | 25.0% |
!!! | GTCTTTTAGTTGTCATAAAA+AGG | + | chr5_2:5224266-5224285 | Msa0751740:three_prime_UTR | 25.0% |
ATTGTGAATGTGATTGTTGA+AGG | + | chr5_2:5215158-5215177 | Msa0751740:CDS | 30.0% | |
TGAAGATGTTTAATCAAAGC+CGG | - | chr5_2:5215194-5215213 | None:intergenic | 30.0% | |
AATATTAGGAGAGAGAGTTA+GGG | + | chr5_2:5215537-5215556 | Msa0751740:intron | 30.0% | |
! | GCGTTCTGAATATTTCAAAA+AGG | + | chr5_2:5215935-5215954 | Msa0751740:intron | 30.0% |
TTCATTGAAGGACTAATATG+AGG | - | chr5_2:5215982-5216001 | None:intergenic | 30.0% | |
AGGACTTAATTGATCATAAG+TGG | + | chr5_2:5216073-5216092 | Msa0751740:intron | 30.0% | |
!! | TTTGTATGACACTCTGAAAT+AGG | - | chr5_2:5216170-5216189 | None:intergenic | 30.0% |
TACAAAGTCAGAAACTGATT+TGG | + | chr5_2:5216184-5216203 | Msa0751740:intron | 30.0% | |
! | TTAGATTATTCAGGTTAAGG+GGG | + | chr5_2:5216295-5216314 | Msa0751740:intron | 30.0% |
!! | ATGTTCAAGAAGTACACTTT+TGG | + | chr5_2:5216358-5216377 | Msa0751740:intron | 30.0% |
!!! | ACTTTCTCCCATTTTAGAAT+TGG | + | chr5_2:5216435-5216454 | Msa0751740:intron | 30.0% |
AGCTTACAGGATAATATTTG+AGG | + | chr5_2:5216466-5216485 | Msa0751740:intron | 30.0% | |
GCTTACAGGATAATATTTGA+GGG | + | chr5_2:5216467-5216486 | Msa0751740:intron | 30.0% | |
!! | CTTTTGAAGAGACATAAGAA+TGG | + | chr5_2:5216612-5216631 | Msa0751740:CDS | 30.0% |
ATATGTTGATCTCAATGTGT+AGG | + | chr5_2:5216793-5216812 | Msa0751740:intron | 30.0% | |
AGTTCATTTGCTTGAATTTG+CGG | + | chr5_2:5216839-5216858 | Msa0751740:CDS | 30.0% | |
AAGAAAGAAGTTATTCTTGC+TGG | + | chr5_2:5217245-5217264 | Msa0751740:CDS | 30.0% | |
AACCTGTTATTGGATTACTT+AGG | + | chr5_2:5217276-5217295 | Msa0751740:CDS | 30.0% | |
TACCTAAGTAATCCAATAAC+AGG | - | chr5_2:5217281-5217300 | None:intergenic | 30.0% | |
!!! | TCAGCTGTATATTTTGATCT+TGG | - | chr5_2:5217453-5217472 | None:intergenic | 30.0% |
ATCAAAATATACAGCTGAGA+AGG | + | chr5_2:5217455-5217474 | Msa0751740:CDS | 30.0% | |
!! | ATTGCTCTAAAACCAAACTT+AGG | - | chr5_2:5217635-5217654 | None:intergenic | 30.0% |
AAGATACAAAAGGTTTACAG+AGG | - | chr5_2:5217954-5217973 | None:intergenic | 30.0% | |
TTCTTATCTTCTGTTGATCT+TGG | + | chr5_2:5218119-5218138 | Msa0751740:intron | 30.0% | |
GAAAACCATAGTAGTCAAAT+CGG | + | chr5_2:5218341-5218360 | Msa0751740:intron | 30.0% | |
AAAACCATAGTAGTCAAATC+GGG | + | chr5_2:5218342-5218361 | Msa0751740:intron | 30.0% | |
CTTAATTATATGTCTAACCC+GGG | - | chr5_2:5218533-5218552 | None:intergenic | 30.0% | |
CCTTAATTATATGTCTAACC+CGG | - | chr5_2:5218534-5218553 | None:intergenic | 30.0% | |
!!! | ATTATGTTTTTTATGGGAGG+GGG | - | chr5_2:5218634-5218653 | None:intergenic | 30.0% |
!!! | GATTATGTTTTTTATGGGAG+GGG | - | chr5_2:5218635-5218654 | None:intergenic | 30.0% |
TTTAAATGTCAAACATGCTC+TGG | - | chr5_2:5218878-5218897 | None:intergenic | 30.0% | |
!!! | TGGTAGCATGAATTTTTTAG+TGG | + | chr5_2:5218933-5218952 | Msa0751740:intron | 30.0% |
!! | TTTTTAGAGAAACACGGTTT+AGG | + | chr5_2:5219161-5219180 | Msa0751740:intron | 30.0% |
!! | TTTTAGAGAAACACGGTTTA+GGG | + | chr5_2:5219162-5219181 | Msa0751740:intron | 30.0% |
TGTCAAAAAAAAAAGGCAAG+AGG | + | chr5_2:5219315-5219334 | Msa0751740:intron | 30.0% | |
AAAAAAAAAGGCAAGAGGAT+AGG | + | chr5_2:5219320-5219339 | Msa0751740:intron | 30.0% | |
CAAGATGATAGGAATGAAAT+TGG | + | chr5_2:5219408-5219427 | Msa0751740:intron | 30.0% | |
TTGAAGTACAAGGAATATCA+CGG | + | chr5_2:5219642-5219661 | Msa0751740:intron | 30.0% | |
CGAGATATATAGAAACATAG+CGG | + | chr5_2:5219779-5219798 | Msa0751740:intron | 30.0% | |
!! | TATAGAAACATAGCGGATAA+TGG | + | chr5_2:5219786-5219805 | Msa0751740:intron | 30.0% |
!! | ATAGAAACATAGCGGATAAT+GGG | + | chr5_2:5219787-5219806 | Msa0751740:intron | 30.0% |
GAAATTAAATCATTGAGTCG+TGG | + | chr5_2:5219824-5219843 | Msa0751740:intron | 30.0% | |
AGTTACAGTTTAAGTCTGAA+AGG | + | chr5_2:5219865-5219884 | Msa0751740:intron | 30.0% | |
AACATTGCAAATTATGGGAA+AGG | + | chr5_2:5219931-5219950 | Msa0751740:intron | 30.0% | |
AGTAAGATACATATCAGTGA+AGG | + | chr5_2:5220069-5220088 | Msa0751740:intron | 30.0% | |
GTAAGATACATATCAGTGAA+GGG | + | chr5_2:5220070-5220089 | Msa0751740:intron | 30.0% | |
! | ATAGTAGGATTCAAGGTTTT+TGG | + | chr5_2:5220106-5220125 | Msa0751740:intron | 30.0% |
! | TAGTAGGATTCAAGGTTTTT+GGG | + | chr5_2:5220107-5220126 | Msa0751740:intron | 30.0% |
ATACAGAGTGAGATATGTAT+CGG | + | chr5_2:5220130-5220149 | Msa0751740:intron | 30.0% | |
TCTGTAATTCAGCTTACAAA+TGG | - | chr5_2:5220362-5220381 | None:intergenic | 30.0% | |
AACATCATAACCATTTCCTT+TGG | + | chr5_2:5220390-5220409 | Msa0751740:intron | 30.0% | |
ATTTAATATCTTCAGGCCAA+AGG | - | chr5_2:5220409-5220428 | None:intergenic | 30.0% | |
AAGCTTCTTGACTCAAAAAA+TGG | + | chr5_2:5220493-5220512 | Msa0751740:CDS | 30.0% | |
AGCTTCTTGACTCAAAAAAT+GGG | + | chr5_2:5220494-5220513 | Msa0751740:CDS | 30.0% | |
TTGAGACAAAAGATCTATAG+TGG | - | chr5_2:5220595-5220614 | None:intergenic | 30.0% | |
CAATGATATAGGCAACAAAA+GGG | - | chr5_2:5220808-5220827 | None:intergenic | 30.0% | |
! | CTTTTGTTGCCTATATCATT+GGG | + | chr5_2:5220807-5220826 | Msa0751740:intron | 30.0% |
CTTCATGAACTTGAAACATT+AGG | + | chr5_2:5220866-5220885 | Msa0751740:intron | 30.0% | |
ATTTCTATTGTAGGCAACTA+AGG | + | chr5_2:5220927-5220946 | Msa0751740:intron | 30.0% | |
AGACTAGAAGAGAAGATTAA+TGG | + | chr5_2:5220973-5220992 | Msa0751740:CDS | 30.0% | |
ACTTATAGAATAAGGTTTGG+TGG | - | chr5_2:5221124-5221143 | None:intergenic | 30.0% | |
GGAACTTATAGAATAAGGTT+TGG | - | chr5_2:5221127-5221146 | None:intergenic | 30.0% | |
! | TCTTATGAGAGTTTCTGAAA+AGG | + | chr5_2:5221217-5221236 | Msa0751740:CDS | 30.0% |
! | GCAACAAAGTATCCATAAAA+AGG | - | chr5_2:5221389-5221408 | None:intergenic | 30.0% |
ATTGTATATAAGCTAACCTG+CGG | - | chr5_2:5221586-5221605 | None:intergenic | 30.0% | |
CCTGTGATTATGAAAATAGT+GGG | - | chr5_2:5221662-5221681 | None:intergenic | 30.0% | |
TCCTGTGATTATGAAAATAG+TGG | - | chr5_2:5221663-5221682 | None:intergenic | 30.0% | |
TTTATCTTTCTCAATGGTGT+GGG | + | chr5_2:5221733-5221752 | Msa0751740:intron | 30.0% | |
AGAAATGTTGCATTGGAAAA+TGG | + | chr5_2:5221937-5221956 | Msa0751740:intron | 30.0% | |
GATATCACAAGTTCAAAACA+TGG | - | chr5_2:5222124-5222143 | None:intergenic | 30.0% | |
TTTGAACTTGTGATATCTCT+TGG | + | chr5_2:5222127-5222146 | Msa0751740:intron | 30.0% | |
!! | AAACTGTTTTCTAGAAGTGA+CGG | + | chr5_2:5222286-5222305 | Msa0751740:intron | 30.0% |
TTCAACCAAAAATGTAACGT+CGG | - | chr5_2:5222499-5222518 | None:intergenic | 30.0% | |
AAACTATGACACTACATTTC+AGG | - | chr5_2:5222586-5222605 | None:intergenic | 30.0% | |
GTTGACATTTGTACATAACT+AGG | + | chr5_2:5222608-5222627 | Msa0751740:intron | 30.0% | |
TCAACAGTAACAAGAATCAA+GGG | - | chr5_2:5222759-5222778 | None:intergenic | 30.0% | |
ATCAACAGTAACAAGAATCA+AGG | - | chr5_2:5222760-5222779 | None:intergenic | 30.0% | |
TCGTAGAGAGAAATCAATAA+AGG | - | chr5_2:5222804-5222823 | None:intergenic | 30.0% | |
! | CACTTTTGTTGGATATTTCA+TGG | + | chr5_2:5222878-5222897 | Msa0751740:intron | 30.0% |
TTGTATATCAATCAAGGACA+TGG | - | chr5_2:5222961-5222980 | None:intergenic | 30.0% | |
! | TTTTACTCTATTACAGGAGA+AGG | + | chr5_2:5222984-5223003 | Msa0751740:intron | 30.0% |
AAACTTCCATAAGGCATATA+TGG | - | chr5_2:5223074-5223093 | None:intergenic | 30.0% | |
TGGAAGTTTGTAATGATTTG+AGG | + | chr5_2:5223085-5223104 | Msa0751740:intron | 30.0% | |
! | ACATGCATCCTTTTTATCTT+GGG | + | chr5_2:5223426-5223445 | Msa0751740:CDS | 30.0% |
ATAAATTAAGTGAAACGCCA+GGG | + | chr5_2:5223457-5223476 | Msa0751740:CDS | 30.0% | |
GAGAAGCAAATATAAGATTG+AGG | - | chr5_2:5223497-5223516 | None:intergenic | 30.0% | |
TGCCAGAAACTTTCAATATA+TGG | - | chr5_2:5223631-5223650 | None:intergenic | 30.0% | |
! | AAACAGTGACATTCTTTTAG+AGG | + | chr5_2:5223650-5223669 | Msa0751740:intron | 30.0% |
GAGCATTAACAAAGTAATTG+CGG | - | chr5_2:5223786-5223805 | None:intergenic | 30.0% | |
CTTTGTTAATGCTCTTACAA+AGG | + | chr5_2:5223792-5223811 | Msa0751740:CDS | 30.0% | |
TTGTTAATGCTCTTACAAAG+GGG | + | chr5_2:5223794-5223813 | Msa0751740:CDS | 30.0% | |
ATAACCATCACAATATTGCA+GGG | - | chr5_2:5224071-5224090 | None:intergenic | 30.0% | |
ATTGCAAAGCAAAATCGATT+GGG | - | chr5_2:5224112-5224131 | None:intergenic | 30.0% | |
AATTGCAAAGCAAAATCGAT+TGG | - | chr5_2:5224113-5224132 | None:intergenic | 30.0% | |
TCTTGCAAACGACTAATTAA+TGG | - | chr5_2:5224188-5224207 | None:intergenic | 30.0% | |
TTATAGGGACTAAAAATCGA+AGG | - | chr5_2:5224380-5224399 | None:intergenic | 30.0% | |
! | GCGTGATACAAAATGGATTT+CGG | - | chr5_2:5214695-5214714 | None:intergenic | 35.0% |
AGAGTTAGATATGTGTGAGA+GGG | - | chr5_2:5214724-5214743 | None:intergenic | 35.0% | |
AAGAGTTAGATATGTGTGAG+AGG | - | chr5_2:5214725-5214744 | None:intergenic | 35.0% | |
AGAAGAAGAAAGAGTCTAGA+AGG | - | chr5_2:5214801-5214820 | None:intergenic | 35.0% | |
TTCTTCTTCTTGATCGTTGA+TGG | + | chr5_2:5214814-5214833 | Msa0751740:exon | 35.0% | |
CTACCATCATCAGAAAAGAA+AGG | + | chr5_2:5214842-5214861 | Msa0751740:CDS | 35.0% | |
! | GTTGTTCCAGTTTTCTTTTC+TGG | - | chr5_2:5214868-5214887 | None:intergenic | 35.0% |
! | TGTTGTTGTTGCAATTGTAG+AGG | + | chr5_2:5215133-5215152 | Msa0751740:intron | 35.0% |
TGAACAGAATCATGTTGAGT+CGG | - | chr5_2:5215221-5215240 | None:intergenic | 35.0% | |
TTCTCAACCTCATGTTCAAA+CGG | - | chr5_2:5215254-5215273 | None:intergenic | 35.0% | |
TTTGAACATGAGGTTGAGAA+AGG | + | chr5_2:5215254-5215273 | Msa0751740:CDS | 35.0% | |
! | TTCAAGTTCAGTCGTTGAAA+TGG | + | chr5_2:5215351-5215370 | Msa0751740:intron | 35.0% |
!! | AAACTATGGTTCAGGTTGTA+TGG | + | chr5_2:5215404-5215423 | Msa0751740:intron | 35.0% |
GTTGTATGGAACATAGTGTT+AGG | + | chr5_2:5215418-5215437 | Msa0751740:intron | 35.0% | |
! | TACACATTTTATTCACGTGC+CGG | - | chr5_2:5215454-5215473 | None:intergenic | 35.0% |
CACGTGAATAAAATGTGTAG+CGG | + | chr5_2:5215455-5215474 | Msa0751740:intron | 35.0% | |
!! | TAAAATGTGTAGCGGATATG+AGG | + | chr5_2:5215463-5215482 | Msa0751740:intron | 35.0% |
AGGATGTTATGTTTGATGTG+TGG | + | chr5_2:5215483-5215502 | Msa0751740:intron | 35.0% | |
CAATATTAGGAGAGAGAGTT+AGG | + | chr5_2:5215536-5215555 | Msa0751740:intron | 35.0% | |
AAAGTTGTATCCTGCTAAGT+GGG | - | chr5_2:5215814-5215833 | None:intergenic | 35.0% | |
! | TACAAAGTCAGGGACTATTT+TGG | - | chr5_2:5215892-5215911 | None:intergenic | 35.0% |
AAAATAGTCCCTGACTTTGT+AGG | + | chr5_2:5215891-5215910 | Msa0751740:intron | 35.0% | |
AAATAGTCCCTGACTTTGTA+GGG | + | chr5_2:5215892-5215911 | Msa0751740:intron | 35.0% | |
AGTCCTTCAATGAATATGCT+AGG | + | chr5_2:5215988-5216007 | Msa0751740:intron | 35.0% | |
GTCCTTCAATGAATATGCTA+GGG | + | chr5_2:5215989-5216008 | Msa0751740:intron | 35.0% | |
TGATAGTAGGTGGAAAACTT+AGG | + | chr5_2:5216019-5216038 | Msa0751740:intron | 35.0% | |
GATAGTAGGTGGAAAACTTA+GGG | + | chr5_2:5216020-5216039 | Msa0751740:intron | 35.0% | |
TGTACTTCTTGAACATTGTG+TGG | - | chr5_2:5216354-5216373 | None:intergenic | 35.0% | |
!! | TCAAGAAGTACACTTTTGGA+TGG | + | chr5_2:5216362-5216381 | Msa0751740:intron | 35.0% |
!!! | TCCCATTTTAGAATTGGTAC+AGG | + | chr5_2:5216441-5216460 | Msa0751740:intron | 35.0% |
!! | CCCTGTACCAATTCTAAAAT+GGG | - | chr5_2:5216445-5216464 | None:intergenic | 35.0% |
!!! | CCCATTTTAGAATTGGTACA+GGG | + | chr5_2:5216442-5216461 | Msa0751740:intron | 35.0% |
! | TCCCTGTACCAATTCTAAAA+TGG | - | chr5_2:5216446-5216465 | None:intergenic | 35.0% |
AAGATCAACAAGATGCTTCA+AGG | - | chr5_2:5216595-5216614 | None:intergenic | 35.0% | |
! | GTGCCATTAATAGTCTCATT+CGG | + | chr5_2:5216646-5216665 | Msa0751740:CDS | 35.0% |
CATTAATAGTCTCATTCGGA+GGG | + | chr5_2:5216650-5216669 | Msa0751740:CDS | 35.0% | |
TCAAGCAAATGAACTAATGG+TGG | - | chr5_2:5216834-5216853 | None:intergenic | 35.0% | |
GAAAACAAGAATCAGGTAAG+TGG | + | chr5_2:5216921-5216940 | Msa0751740:intron | 35.0% | |
AATCCCCTTCTTCCAATAAA+AGG | - | chr5_2:5216947-5216966 | None:intergenic | 35.0% | |
!! | CAACTCTGATTTTGATGCTT+CGG | + | chr5_2:5217054-5217073 | Msa0751740:CDS | 35.0% |
TGCTGCTATTCATTATGAAG+CGG | + | chr5_2:5217085-5217104 | Msa0751740:CDS | 35.0% | |
ATTCGCAATACTGTTGAGTT+TGG | + | chr5_2:5217141-5217160 | Msa0751740:intron | 35.0% | |
GTCTTTACACTTCTCTTACT+GGG | + | chr5_2:5217163-5217182 | Msa0751740:intron | 35.0% | |
GCACATTTGATGAATTAGGT+TGG | + | chr5_2:5217185-5217204 | Msa0751740:intron | 35.0% | |
!! | ATGAATTAGGTTGGTGTGAT+CGG | + | chr5_2:5217194-5217213 | Msa0751740:intron | 35.0% |
TAATCCAATAACAGGTTGCA+AGG | - | chr5_2:5217273-5217292 | None:intergenic | 35.0% | |
!!! | TGGAGCATTGTACTTTTCAT+GGG | - | chr5_2:5217319-5217338 | None:intergenic | 35.0% |
!!! | ATGGAGCATTGTACTTTTCA+TGG | - | chr5_2:5217320-5217339 | None:intergenic | 35.0% |
! | ATCAATACAAGTTGAGGGTA+GGG | - | chr5_2:5217367-5217386 | None:intergenic | 35.0% |
! | TATCAATACAAGTTGAGGGT+AGG | - | chr5_2:5217368-5217387 | None:intergenic | 35.0% |
AACTACTGTTTGATGCTGTT+AGG | + | chr5_2:5217719-5217738 | Msa0751740:intron | 35.0% | |
GCTGTTAGGATATAGAGTAT+AGG | + | chr5_2:5217733-5217752 | Msa0751740:intron | 35.0% | |
!! | AGTAAGTTGATGAGCTTGTT+AGG | + | chr5_2:5217796-5217815 | Msa0751740:intron | 35.0% |
GTCTTTAAATAGCCCTCAAT+CGG | + | chr5_2:5217857-5217876 | Msa0751740:intron | 35.0% | |
!!! | GAATAATTGAGTTTTGGGAC+TGG | + | chr5_2:5217902-5217921 | Msa0751740:intron | 35.0% |
!! | CTGTTGATCTTGGTTTTTGT+AGG | + | chr5_2:5218129-5218148 | Msa0751740:intron | 35.0% |
! | GACTGAAGCATTTCTATCAA+AGG | - | chr5_2:5218184-5218203 | None:intergenic | 35.0% |
!! | AGAAATGTCTGCTTTTGCAT+TGG | + | chr5_2:5218222-5218241 | Msa0751740:CDS | 35.0% |
!! | GAAATGTCTGCTTTTGCATT+GGG | + | chr5_2:5218223-5218242 | Msa0751740:CDS | 35.0% |
!! | AAATGTCTGCTTTTGCATTG+GGG | + | chr5_2:5218224-5218243 | Msa0751740:CDS | 35.0% |
! | CCGGGTTAGACATATAATTA+AGG | + | chr5_2:5218531-5218550 | Msa0751740:intron | 35.0% |
TGAGTGAAATTCGCTATGTA+TGG | + | chr5_2:5218555-5218574 | Msa0751740:intron | 35.0% | |
!!! | TTATGTTTTTTATGGGAGGG+GGG | - | chr5_2:5218633-5218652 | None:intergenic | 35.0% |
TTGTTACAAACAGGGTCTAT+GGG | - | chr5_2:5218781-5218800 | None:intergenic | 35.0% | |
TTTGTTACAAACAGGGTCTA+TGG | - | chr5_2:5218782-5218801 | None:intergenic | 35.0% | |
TATATATAGCCGAGTTTGCA+TGG | + | chr5_2:5219190-5219209 | Msa0751740:intron | 35.0% | |
!!! | GTGCGATGCATTTTTTTAGA+TGG | + | chr5_2:5219430-5219449 | Msa0751740:intron | 35.0% |
AACCTAATACAGCAAATGAG+CGG | + | chr5_2:5219477-5219496 | Msa0751740:intron | 35.0% | |
CAAATGAGCGGGAAAATATT+AGG | + | chr5_2:5219489-5219508 | Msa0751740:intron | 35.0% | |
! | CATTCTTATTTGTCCCAGTA+AGG | + | chr5_2:5219606-5219625 | Msa0751740:intron | 35.0% |
TGTTTCATCCTTGAAGTACA+AGG | + | chr5_2:5219632-5219651 | Msa0751740:intron | 35.0% | |
GTGATATTCCTTGTACTTCA+AGG | - | chr5_2:5219643-5219662 | None:intergenic | 35.0% | |
CTGGTAAACAGAAAAATAGG+AGG | + | chr5_2:5220020-5220039 | Msa0751740:intron | 35.0% | |
!!! | ATATCAGTGAAGGGTGTTTT+CGG | + | chr5_2:5220079-5220098 | Msa0751740:intron | 35.0% |
!!! | AATGCTGCTTTTGCTCTTTA+TGG | + | chr5_2:5220529-5220548 | Msa0751740:CDS | 35.0% |
ATAATGTGCCCGACTTTATT+AGG | + | chr5_2:5220678-5220697 | Msa0751740:CDS | 35.0% | |
TAATGTGCCCGACTTTATTA+GGG | + | chr5_2:5220679-5220698 | Msa0751740:CDS | 35.0% | |
TAATACCTAGGTAGTAACTC+TGG | + | chr5_2:5220761-5220780 | Msa0751740:intron | 35.0% | |
CCAATGATATAGGCAACAAA+AGG | - | chr5_2:5220809-5220828 | None:intergenic | 35.0% | |
! | CCTTTTGTTGCCTATATCAT+TGG | + | chr5_2:5220806-5220825 | Msa0751740:intron | 35.0% |
GCATTTCCTTAAAGATCAGT+GGG | - | chr5_2:5220902-5220921 | None:intergenic | 35.0% | |
AGCATTTCCTTAAAGATCAG+TGG | - | chr5_2:5220903-5220922 | None:intergenic | 35.0% | |
GACATGACACTAATGCAAAA+GGG | - | chr5_2:5221344-5221363 | None:intergenic | 35.0% | |
AGACATGACACTAATGCAAA+AGG | - | chr5_2:5221345-5221364 | None:intergenic | 35.0% | |
! | CCCACTATTTTCATAATCAC+AGG | + | chr5_2:5221659-5221678 | Msa0751740:intron | 35.0% |
CACACCATTGAGAAAGATAA+AGG | - | chr5_2:5221734-5221753 | None:intergenic | 35.0% | |
CTTTATCTTTCTCAATGGTG+TGG | + | chr5_2:5221732-5221751 | Msa0751740:intron | 35.0% | |
!! | TTTACCCTTGTTGTTCTCAT+AGG | + | chr5_2:5221782-5221801 | Msa0751740:intron | 35.0% |
AGTTCCTATGAGAACAACAA+GGG | - | chr5_2:5221789-5221808 | None:intergenic | 35.0% | |
AAGTTCCTATGAGAACAACA+AGG | - | chr5_2:5221790-5221809 | None:intergenic | 35.0% | |
!! | GAAAACAGTTTTATCGACTG+TGG | - | chr5_2:5222277-5222296 | None:intergenic | 35.0% |
! | TTTAGACGTGATGGAAAGTA+AGG | - | chr5_2:5222377-5222396 | None:intergenic | 35.0% |
ATATCCTAGACTATTCTTGC+AGG | + | chr5_2:5222434-5222453 | Msa0751740:intron | 35.0% | |
ACTATTCTTGCAGGTCTATT+TGG | + | chr5_2:5222443-5222462 | Msa0751740:intron | 35.0% | |
CTATTCTTGCAGGTCTATTT+GGG | + | chr5_2:5222444-5222463 | Msa0751740:intron | 35.0% | |
TATTCTTGCAGGTCTATTTG+GGG | + | chr5_2:5222445-5222464 | Msa0751740:intron | 35.0% | |
!!! | GACGTTACATTTTTGGTTGA+AGG | + | chr5_2:5222498-5222517 | Msa0751740:CDS | 35.0% |
TATACTTTGCTGCAGGTAAA+CGG | + | chr5_2:5222637-5222656 | Msa0751740:intron | 35.0% | |
!! | GATGTTTGATGGTGGTTATA+GGG | + | chr5_2:5222710-5222729 | Msa0751740:CDS | 35.0% |
!! | ATCCAACAAAAGTGTTTGCA+GGG | - | chr5_2:5222872-5222891 | None:intergenic | 35.0% |
!! | TATCCAACAAAAGTGTTTGC+AGG | - | chr5_2:5222873-5222892 | None:intergenic | 35.0% |
GATTCCAAATATTAGATGGG+AGG | + | chr5_2:5223023-5223042 | Msa0751740:CDS | 35.0% | |
AAGACCTCCCATCTAATATT+TGG | - | chr5_2:5223030-5223049 | None:intergenic | 35.0% | |
GTCTAACCATATATGCCTTA+TGG | + | chr5_2:5223065-5223084 | Msa0751740:intron | 35.0% | |
TTGTCCAGATTTATCTACAC+TGG | + | chr5_2:5223134-5223153 | Msa0751740:intron | 35.0% | |
CAGATTTATCTACACTGGAT+CGG | + | chr5_2:5223139-5223158 | Msa0751740:intron | 35.0% | |
CTGATCAATATCTCTTGGAA+GGG | + | chr5_2:5223204-5223223 | Msa0751740:CDS | 35.0% | |
! | TCTCAATGATGTAGCATTGA+AGG | - | chr5_2:5223403-5223422 | None:intergenic | 35.0% |
! | CACATGCATCCTTTTTATCT+TGG | + | chr5_2:5223425-5223444 | Msa0751740:CDS | 35.0% |
! | CATGCATCCTTTTTATCTTG+GGG | + | chr5_2:5223427-5223446 | Msa0751740:CDS | 35.0% |
GATAAATTAAGTGAAACGCC+AGG | + | chr5_2:5223456-5223475 | Msa0751740:CDS | 35.0% | |
! | TGTAGAATTCTCTTTTCCCT+TGG | + | chr5_2:5223523-5223542 | Msa0751740:intron | 35.0% |
! | GTGTCTTTTACACATTCCAA+GGG | - | chr5_2:5223542-5223561 | None:intergenic | 35.0% |
! | AGTGTCTTTTACACATTCCA+AGG | - | chr5_2:5223543-5223562 | None:intergenic | 35.0% |
ACAAAGTAATTGCGGATATC+TGG | - | chr5_2:5223778-5223797 | None:intergenic | 35.0% | |
TGAGAGACACATCATCAAAA+AGG | - | chr5_2:5223978-5223997 | None:intergenic | 35.0% | |
! | TTTTCCCTGCAATATTGTGA+TGG | + | chr5_2:5224064-5224083 | Msa0751740:three_prime_UTR | 35.0% |
CATAACCATCACAATATTGC+AGG | - | chr5_2:5224072-5224091 | None:intergenic | 35.0% | |
! | GAGAAGAGCGTGATACAAAA+TGG | - | chr5_2:5214702-5214721 | None:intergenic | 40.0% |
! | TGGCCTTTCTTTTCTGATGA+TGG | - | chr5_2:5214848-5214867 | None:intergenic | 40.0% |
GAAAGGCCAGAAAAGAAAAC+TGG | + | chr5_2:5214859-5214878 | Msa0751740:CDS | 40.0% | |
!! | TGAAACGTGTTGATTGACGT+CGG | - | chr5_2:5214960-5214979 | None:intergenic | 40.0% |
CGTTGGAAGAGAAAGAAGAA+AGG | - | chr5_2:5214988-5215007 | None:intergenic | 40.0% | |
CTCGCTGATCTTGCTAAAAA+CGG | + | chr5_2:5215046-5215065 | Msa0751740:CDS | 40.0% | |
GTGAATGTGATTGTTGAAGG+AGG | + | chr5_2:5215161-5215180 | Msa0751740:CDS | 40.0% | |
GTGATGCAAAACTATGGTTC+AGG | + | chr5_2:5215396-5215415 | Msa0751740:intron | 40.0% | |
AGTGTTAGGCAATGAAGAAC+CGG | + | chr5_2:5215432-5215451 | Msa0751740:intron | 40.0% | |
AAGTTGTATCCTGCTAAGTG+GGG | - | chr5_2:5215813-5215832 | None:intergenic | 40.0% | |
CAAAGTTGTATCCTGCTAAG+TGG | - | chr5_2:5215815-5215834 | None:intergenic | 40.0% | |
!! | AAAGTCAGGGACTATTTTGG+CGG | - | chr5_2:5215889-5215908 | None:intergenic | 40.0% |
! | TTTGTAGGGTGCTCTCAAAT+AGG | + | chr5_2:5215906-5215925 | Msa0751740:intron | 40.0% |
GTCCCTAGCATATTCATTGA+AGG | - | chr5_2:5215994-5216013 | None:intergenic | 40.0% | |
! | CTAGGGACTACATTGATAGT+AGG | + | chr5_2:5216006-5216025 | Msa0751740:intron | 40.0% |
! | GTTAGTTTAGGGAATGACCA+AGG | - | chr5_2:5216512-5216531 | None:intergenic | 40.0% |
ACAATGAGCTGTTGATGTTC+TGG | - | chr5_2:5216561-5216580 | None:intergenic | 40.0% | |
CCTCCGAATGAGACTATTAA+TGG | - | chr5_2:5216652-5216671 | None:intergenic | 40.0% | |
CCATTAATAGTCTCATTCGG+AGG | + | chr5_2:5216649-5216668 | Msa0751740:CDS | 40.0% | |
TTGAAGAAGCAAACCTGACA+CGG | - | chr5_2:5216725-5216744 | None:intergenic | 40.0% | |
GTTGATCTCAATGTGTAGGA+CGG | + | chr5_2:5216797-5216816 | Msa0751740:intron | 40.0% | |
! | TCAGGTAAGTGGCCTTTTAT+TGG | + | chr5_2:5216932-5216951 | Msa0751740:intron | 40.0% |
! | AGTGGCCTTTTATTGGAAGA+AGG | + | chr5_2:5216939-5216958 | Msa0751740:intron | 40.0% |
! | GTGGCCTTTTATTGGAAGAA+GGG | + | chr5_2:5216940-5216959 | Msa0751740:intron | 40.0% |
! | TGGCCTTTTATTGGAAGAAG+GGG | + | chr5_2:5216941-5216960 | Msa0751740:intron | 40.0% |
! | CGAAGCATCAAAATCAGAGT+TGG | - | chr5_2:5217056-5217075 | None:intergenic | 40.0% |
GGTCTTTACACTTCTCTTAC+TGG | + | chr5_2:5217162-5217181 | Msa0751740:intron | 40.0% | |
CTGGGCACATTTGATGAATT+AGG | + | chr5_2:5217181-5217200 | Msa0751740:intron | 40.0% | |
!!! | GTCCAAAGCTCCTTTTTTGA+TGG | + | chr5_2:5217417-5217436 | Msa0751740:intron | 40.0% |
TGCCATCAAAAAAGGAGCTT+TGG | - | chr5_2:5217422-5217441 | None:intergenic | 40.0% | |
!! | AAGTTGATGAGCTTGTTAGG+TGG | + | chr5_2:5217799-5217818 | Msa0751740:intron | 40.0% |
! | TAGAGGGGAAAGATAGCTTT+TGG | + | chr5_2:5217880-5217899 | Msa0751740:intron | 40.0% |
TAGGTTCACATTGTACAGAG+AGG | + | chr5_2:5218148-5218167 | Msa0751740:intron | 40.0% | |
! | GTATCCCGATTTGACTACTA+TGG | - | chr5_2:5218349-5218368 | None:intergenic | 40.0% |
TGTTACAAACAGGGTCTATG+GGG | - | chr5_2:5218780-5218799 | None:intergenic | 40.0% | |
CCCTAATTTCCATGCAAACT+CGG | - | chr5_2:5219202-5219221 | None:intergenic | 40.0% | |
CCGAGTTTGCATGGAAATTA+GGG | + | chr5_2:5219199-5219218 | Msa0751740:intron | 40.0% | |
ACCTAATACAGCAAATGAGC+GGG | + | chr5_2:5219478-5219497 | Msa0751740:intron | 40.0% | |
! | TCATCAGGAACAGAAGTACA+AGG | + | chr5_2:5219578-5219597 | Msa0751740:intron | 40.0% |
GGATGAAACATCACCTTACT+GGG | - | chr5_2:5219622-5219641 | None:intergenic | 40.0% | |
AGGATGAAACATCACCTTAC+TGG | - | chr5_2:5219623-5219642 | None:intergenic | 40.0% | |
ATCATTGAGTCGTGGGATAT+TGG | + | chr5_2:5219832-5219851 | Msa0751740:intron | 40.0% | |
!! | CGTGGGGTATTGAAAAGTAT+TGG | + | chr5_2:5219907-5219926 | Msa0751740:intron | 40.0% |
! | GCGCTGGTAAACAGAAAAAT+AGG | + | chr5_2:5220017-5220036 | Msa0751740:intron | 40.0% |
AATAGGAGGAACTACTACAC+TGG | + | chr5_2:5220034-5220053 | Msa0751740:intron | 40.0% | |
!! | AGGAACTACTACACTGGTTT+GGG | + | chr5_2:5220040-5220059 | Msa0751740:intron | 40.0% |
! | GTGAGATATGTATCGGTGAA+TGG | + | chr5_2:5220137-5220156 | Msa0751740:intron | 40.0% |
!! | GTATCGGTGAATGGTCTTTT+CGG | + | chr5_2:5220146-5220165 | Msa0751740:intron | 40.0% |
TAGGATACTTACTGCACTGA+TGG | + | chr5_2:5220190-5220209 | Msa0751740:intron | 40.0% | |
AGTGAGCTTAGATTTGAGCA+AGG | + | chr5_2:5220279-5220298 | Msa0751740:intron | 40.0% | |
TATCTTCAGGCCAAAGGAAA+TGG | - | chr5_2:5220403-5220422 | None:intergenic | 40.0% | |
ATCTTACCTCATTCTCTGCA+AGG | - | chr5_2:5220555-5220574 | None:intergenic | 40.0% | |
! | TGTGTTTTACTTTGTGCCGT+AGG | + | chr5_2:5220655-5220674 | Msa0751740:intron | 40.0% |
TCCACCTACCCTAATAAAGT+CGG | - | chr5_2:5220690-5220709 | None:intergenic | 40.0% | |
AGGTGGAATTAAGAGACTTC+AGG | + | chr5_2:5220703-5220722 | Msa0751740:CDS | 40.0% | |
GGAATTAAGAGACTTCAGGA+TGG | + | chr5_2:5220707-5220726 | Msa0751740:CDS | 40.0% | |
TGAAACCAGAGTTACTACCT+AGG | - | chr5_2:5220769-5220788 | None:intergenic | 40.0% | |
ATAGGCAACAAAAGGGTTCA+AGG | - | chr5_2:5220801-5220820 | None:intergenic | 40.0% | |
ATTCCAAAGACGAGTTGCTT+TGG | + | chr5_2:5221241-5221260 | Msa0751740:CDS | 40.0% | |
TAGGAACATGCATACCATTG+TGG | - | chr5_2:5221316-5221335 | None:intergenic | 40.0% | |
CTAATGCAAAAGGGTTGACT+AGG | - | chr5_2:5221335-5221354 | None:intergenic | 40.0% | |
GAGTTGCTTATTGCACTTCT+TGG | + | chr5_2:5221454-5221473 | Msa0751740:CDS | 40.0% | |
!! | TGCTGTGGCTTTATTCAAGT+TGG | + | chr5_2:5221507-5221526 | Msa0751740:CDS | 40.0% |
!! | AGACAGAGTCATAGCTTTGT+TGG | - | chr5_2:5221533-5221552 | None:intergenic | 40.0% |
CCTCTTAACCAATGCTCTAA+GGG | - | chr5_2:5221909-5221928 | None:intergenic | 40.0% | |
TCCTCTTAACCAATGCTCTA+AGG | - | chr5_2:5221910-5221929 | None:intergenic | 40.0% | |
! | GGTTATGCTAGCACTTGTTA+AGG | - | chr5_2:5222037-5222056 | None:intergenic | 40.0% |
ACACAGAATATGCGCAAACA+GGG | - | chr5_2:5222098-5222117 | None:intergenic | 40.0% | |
AACACAGAATATGCGCAAAC+AGG | - | chr5_2:5222099-5222118 | None:intergenic | 40.0% | |
CACAATGGCCAATTTGTCAA+GGG | + | chr5_2:5222198-5222217 | Msa0751740:intron | 40.0% | |
!! | ACAGTTTTATCGACTGTGGA+TGG | - | chr5_2:5222273-5222292 | None:intergenic | 40.0% |
! | GTGATGGAAAGTAAGGAGAA+AGG | - | chr5_2:5222370-5222389 | None:intergenic | 40.0% |
CCAGAATCATTTAGACGTGA+TGG | - | chr5_2:5222386-5222405 | None:intergenic | 40.0% | |
CCATCACGTCTAAATGATTC+TGG | + | chr5_2:5222383-5222402 | Msa0751740:intron | 40.0% | |
TAGACCTGCAAGAATAGTCT+AGG | - | chr5_2:5222441-5222460 | None:intergenic | 40.0% | |
ATTCTTGCAGGTCTATTTGG+GGG | + | chr5_2:5222446-5222465 | Msa0751740:intron | 40.0% | |
CAAAAATGTAACGTCGGACA+GGG | - | chr5_2:5222493-5222512 | None:intergenic | 40.0% | |
GTATCTCTATACTTTGCTGC+AGG | + | chr5_2:5222630-5222649 | Msa0751740:intron | 40.0% | |
!! | CGATGTTTGATGGTGGTTAT+AGG | + | chr5_2:5222709-5222728 | Msa0751740:CDS | 40.0% |
!! | TTTGATGGTGGTTATAGGGT+GGG | + | chr5_2:5222714-5222733 | Msa0751740:intron | 40.0% |
ACAGTAACAAGAATCAAGGG+AGG | - | chr5_2:5222756-5222775 | None:intergenic | 40.0% | |
! | TTCCCTGCAAACACTTTTGT+TGG | + | chr5_2:5222867-5222886 | Msa0751740:intron | 40.0% |
AGGTCTTTGAGCTTATGATG+AGG | + | chr5_2:5223043-5223062 | Msa0751740:CDS | 40.0% | |
CGATCCAGTGTAGATAAATC+TGG | - | chr5_2:5223141-5223160 | None:intergenic | 40.0% | |
AGAGATATTGATCAGCTGCT+CGG | - | chr5_2:5223199-5223218 | None:intergenic | 40.0% | |
AGCAGCTGATCAATATCTCT+TGG | + | chr5_2:5223199-5223218 | Msa0751740:CDS | 40.0% | |
GCTGATCAATATCTCTTGGA+AGG | + | chr5_2:5223203-5223222 | Msa0751740:CDS | 40.0% | |
ATGTGAATACACGATTGCAC+AGG | + | chr5_2:5223238-5223257 | Msa0751740:CDS | 40.0% | |
! | CACAGGTTAGCTAAGTGAAT+TGG | + | chr5_2:5223255-5223274 | Msa0751740:intron | 40.0% |
AGGAATTCAGATAGATACCC+TGG | - | chr5_2:5223477-5223496 | None:intergenic | 40.0% | |
! | TGATTTTGCCAAATGCTTGC+AGG | + | chr5_2:5223725-5223744 | Msa0751740:intron | 40.0% |
TATTGAAGTGTGAGGTCTTC+TGG | + | chr5_2:5223900-5223919 | Msa0751740:three_prime_UTR | 40.0% | |
CTTCTGGATTCAGAACAACA+TGG | + | chr5_2:5223916-5223935 | Msa0751740:three_prime_UTR | 40.0% | |
AAGAAATGTCCAACACCAAG+TGG | + | chr5_2:5223944-5223963 | Msa0751740:three_prime_UTR | 40.0% | |
AAAAAGGAACAGACACCACT+TGG | - | chr5_2:5223962-5223981 | None:intergenic | 40.0% | |
TTGCAAGAAAGTTGCGTTGA+TGG | + | chr5_2:5224200-5224219 | Msa0751740:three_prime_UTR | 40.0% | |
! | TGCAAGAAAGTTGCGTTGAT+GGG | + | chr5_2:5224201-5224220 | Msa0751740:three_prime_UTR | 40.0% |
AGAAGAGAGAGAGAGAGAGA+GGG | + | chr5_2:5214768-5214787 | Msa0751740:five_prime_UTR | 45.0% | |
GGAAGCTCTATCGAATTCGT+TGG | - | chr5_2:5215005-5215024 | None:intergenic | 45.0% | |
ACAGAATCATGTTGAGTCGG+CGG | - | chr5_2:5215218-5215237 | None:intergenic | 45.0% | |
ACCTCATGTTCAAACGGCAA+CGG | - | chr5_2:5215248-5215267 | None:intergenic | 45.0% | |
!! | AAAGGAAGTGCTTTCGCACT+TGG | + | chr5_2:5215272-5215291 | Msa0751740:CDS | 45.0% |
! | ACTTGGACTTCTTGCTGTCA+AGG | + | chr5_2:5215289-5215308 | Msa0751740:CDS | 45.0% |
! | GGGACTACATTGATAGTAGG+TGG | + | chr5_2:5216009-5216028 | Msa0751740:intron | 45.0% |
TTCGGATGTACTCGTCATGT+TGG | + | chr5_2:5216403-5216422 | Msa0751740:intron | 45.0% | |
TCGGATGTACTCGTCATGTT+GGG | + | chr5_2:5216404-5216423 | Msa0751740:intron | 45.0% | |
ATTGGTACAGGGAAGCTTAC+AGG | + | chr5_2:5216453-5216472 | Msa0751740:intron | 45.0% | |
CAACAGCTCATTGTAGACAG+TGG | + | chr5_2:5216567-5216586 | Msa0751740:CDS | 45.0% | |
GCAGTATTAAAACCCGTGTC+AGG | + | chr5_2:5216709-5216728 | Msa0751740:CDS | 45.0% | |
TGAAGAAGCAAACCTGACAC+GGG | - | chr5_2:5216724-5216743 | None:intergenic | 45.0% | |
! | GTGTCAGGTTTGCTTCTTCA+AGG | + | chr5_2:5216724-5216743 | Msa0751740:intron | 45.0% |
ATCTCAATGTGTAGGACGGA+AGG | + | chr5_2:5216801-5216820 | Msa0751740:intron | 45.0% | |
GAAGGGGGTAAAGGCTTAAA+TGG | - | chr5_2:5217339-5217358 | None:intergenic | 45.0% | |
AGGGAAGCAGCATTGTTACT+TGG | + | chr5_2:5217540-5217559 | Msa0751740:CDS | 45.0% | |
AAATAGCCCTCAATCGGTAG+AGG | + | chr5_2:5217863-5217882 | Msa0751740:intron | 45.0% | |
AATAGCCCTCAATCGGTAGA+GGG | + | chr5_2:5217864-5217883 | Msa0751740:intron | 45.0% | |
! | TGCTTTTGCATTGGGGAGAT+TGG | + | chr5_2:5218231-5218250 | Msa0751740:CDS | 45.0% |
ACCTGTATGTGCAACTTGAG+AGG | + | chr5_2:5218296-5218315 | Msa0751740:intron | 45.0% | |
CCTGTATGTGCAACTTGAGA+GGG | + | chr5_2:5218297-5218316 | Msa0751740:intron | 45.0% | |
!!! | TTTTTTTACCCTGCGTTGCC+CGG | + | chr5_2:5218512-5218531 | Msa0751740:intron | 45.0% |
GCCGAGTTTGCATGGAAATT+AGG | + | chr5_2:5219198-5219217 | Msa0751740:intron | 45.0% | |
!! | TCCCGCTCATTTGCTGTATT+AGG | - | chr5_2:5219482-5219501 | None:intergenic | 45.0% |
AGCAGAGGAACAGAGAAAGA+TGG | + | chr5_2:5219733-5219752 | Msa0751740:intron | 45.0% | |
TGAGTCGTGGGATATTGGAA+AGG | + | chr5_2:5219837-5219856 | Msa0751740:intron | 45.0% | |
AAAAGAATAAGAAGCGGCGC+TGG | + | chr5_2:5220001-5220020 | Msa0751740:intron | 45.0% | |
! | GAGGAACTACTACACTGGTT+TGG | + | chr5_2:5220039-5220058 | Msa0751740:intron | 45.0% |
! | GGTGTTTTCGGTCGTATAGT+AGG | + | chr5_2:5220091-5220110 | Msa0751740:intron | 45.0% |
CGGTCGTATAGTAGGATTCA+AGG | + | chr5_2:5220099-5220118 | Msa0751740:intron | 45.0% | |
GGTATCGTGAAACGTATCGT+AGG | + | chr5_2:5220171-5220190 | Msa0751740:intron | 45.0% | |
CAGGATACACATAACCAAGC+TGG | + | chr5_2:5220436-5220455 | Msa0751740:intron | 45.0% | |
GAGTCAAGAAGCTTCAGTAG+TGG | - | chr5_2:5220487-5220506 | None:intergenic | 45.0% | |
! | TTATGGCCTTGCAGAGAATG+AGG | + | chr5_2:5220546-5220565 | Msa0751740:CDS | 45.0% |
AAGTCGGGCACATTATCCTA+CGG | - | chr5_2:5220674-5220693 | None:intergenic | 45.0% | |
CCACCTACCCTAATAAAGTC+GGG | - | chr5_2:5220689-5220708 | None:intergenic | 45.0% | |
CTGACACCCACTGATCTTTA+AGG | + | chr5_2:5220893-5220912 | Msa0751740:intron | 45.0% | |
! | CACCATCAAGTTGCTGCTTA+GGG | - | chr5_2:5221489-5221508 | None:intergenic | 45.0% |
ATAAGCTAACCTGCGGTGTT+GGG | - | chr5_2:5221579-5221598 | None:intergenic | 45.0% | |
TATAAGCTAACCTGCGGTGT+TGG | - | chr5_2:5221580-5221599 | None:intergenic | 45.0% | |
!! | AAAGAGTGCCCTTAGAGCAT+TGG | + | chr5_2:5221898-5221917 | Msa0751740:intron | 45.0% |
!! | CCCTTAGAGCATTGGTTAAG+AGG | + | chr5_2:5221906-5221925 | Msa0751740:intron | 45.0% |
ATAGCAGCCATGGAAGATTG+TGG | + | chr5_2:5222153-5222172 | Msa0751740:intron | 45.0% | |
CCTTGACAAATTGGCCATTG+TGG | - | chr5_2:5222200-5222219 | None:intergenic | 45.0% | |
CCACAATGGCCAATTTGTCA+AGG | + | chr5_2:5222197-5222216 | Msa0751740:intron | 45.0% | |
AATGGCCAATTTGTCAAGGG+TGG | + | chr5_2:5222201-5222220 | Msa0751740:intron | 45.0% | |
CACTTCCACCCTTGACAAAT+TGG | - | chr5_2:5222209-5222228 | None:intergenic | 45.0% | |
! | TATAGTCTTGCTTTCCGCCA+TGG | + | chr5_2:5222243-5222262 | Msa0751740:intron | 45.0% |
CCAAAAATGTAACGTCGGAC+AGG | - | chr5_2:5222494-5222513 | None:intergenic | 45.0% | |
! | CCTGTCCGACGTTACATTTT+TGG | + | chr5_2:5222491-5222510 | Msa0751740:CDS | 45.0% |
GCATTTCGTGCGATGTTTGA+TGG | + | chr5_2:5222699-5222718 | Msa0751740:CDS | 45.0% | |
TTTCGTGCGATGTTTGATGG+TGG | + | chr5_2:5222702-5222721 | Msa0751740:CDS | 45.0% | |
!! | GTTTGATGGTGGTTATAGGG+TGG | + | chr5_2:5222713-5222732 | Msa0751740:intron | 45.0% |
! | CGAAGTGCCCCAAGATAAAA+AGG | - | chr5_2:5223437-5223456 | None:intergenic | 45.0% |
TCAGAGTTCCTGCAAGCATT+TGG | - | chr5_2:5223736-5223755 | None:intergenic | 45.0% | |
!! | ATAATCTAATAATATAATAA+AGG | - | chr5_2:5216284-5216303 | None:intergenic | 5.0% |
!! | AAAATATTGTAAAAAAAAAA+AGG | + | chr5_2:5219255-5219274 | Msa0751740:intron | 5.0% |
GAGAAGAGAGAGAGAGAGAG+AGG | + | chr5_2:5214767-5214786 | Msa0751740:five_prime_UTR | 50.0% | |
GGGAGATCTGTGTGTCTTGT+TGG | - | chr5_2:5214901-5214920 | None:intergenic | 50.0% | |
!! | TGTTGAAGGAGGTGCTGTTC+CGG | + | chr5_2:5215172-5215191 | Msa0751740:CDS | 50.0% |
TGTATCCTGCTAAGTGGGGT+TGG | - | chr5_2:5215809-5215828 | None:intergenic | 50.0% | |
!! | GAGAGCACCCTACAAAGTCA+GGG | - | chr5_2:5215902-5215921 | None:intergenic | 50.0% |
!! | TGAGAGCACCCTACAAAGTC+AGG | - | chr5_2:5215903-5215922 | None:intergenic | 50.0% |
GGTGCTCTCAAATAGGTTGC+TGG | + | chr5_2:5215913-5215932 | Msa0751740:intron | 50.0% | |
CGGATGTACTCGTCATGTTG+GGG | + | chr5_2:5216405-5216424 | Msa0751740:intron | 50.0% | |
ATGTACTCGTCATGTTGGGG+TGG | + | chr5_2:5216408-5216427 | Msa0751740:intron | 50.0% | |
TCAATGTGTAGGACGGAAGG+TGG | + | chr5_2:5216804-5216823 | Msa0751740:intron | 50.0% | |
CAATGTGTAGGACGGAAGGT+GGG | + | chr5_2:5216805-5216824 | Msa0751740:intron | 50.0% | |
AAAGTGCAAAGAGCAGCTGC+TGG | + | chr5_2:5216867-5216886 | Msa0751740:CDS | 50.0% | |
! | GGTTGGTGTGATCGGAAATC+TGG | + | chr5_2:5217202-5217221 | Msa0751740:intron | 50.0% |
GGAGCCTTGCAACCTGTTAT+TGG | + | chr5_2:5217266-5217285 | Msa0751740:CDS | 50.0% | |
TTGAGGGTAGGGTTGCAGAA+GGG | - | chr5_2:5217356-5217375 | None:intergenic | 50.0% | |
GAGCAACAGGAGCTGTTACA+TGG | - | chr5_2:5217510-5217529 | None:intergenic | 50.0% | |
!! | CTGTTGCTCTGAAAGCCAGA+GGG | + | chr5_2:5217521-5217540 | Msa0751740:CDS | 50.0% |
! | GTAACAATGCTGCTTCCCTC+TGG | - | chr5_2:5217539-5217558 | None:intergenic | 50.0% |
! | AGCGACTGATTCAGACTGCA+AGG | + | chr5_2:5217572-5217591 | Msa0751740:CDS | 50.0% |
ATAGCCCTCAATCGGTAGAG+GGG | + | chr5_2:5217865-5217884 | Msa0751740:intron | 50.0% | |
! | CTTTCCCCTCTACCGATTGA+GGG | - | chr5_2:5217872-5217891 | None:intergenic | 50.0% |
! | TCTTTCCCCTCTACCGATTG+AGG | - | chr5_2:5217873-5217892 | None:intergenic | 50.0% |
! | CTGGAGACAAAGCATCTGCT+AGG | - | chr5_2:5218092-5218111 | None:intergenic | 50.0% |
! | CCCTCTCAAGTTGCACATAC+AGG | - | chr5_2:5218300-5218319 | None:intergenic | 50.0% |
!!! | TTTTTTACCCTGCGTTGCCC+GGG | + | chr5_2:5218513-5218532 | Msa0751740:intron | 50.0% |
! | CGGTGAATGGTCTTTTCGGT+TGG | + | chr5_2:5220150-5220169 | Msa0751740:intron | 50.0% |
CAGAGTGTGCAATACCAGCT+TGG | - | chr5_2:5220453-5220472 | None:intergenic | 50.0% | |
CAAGCTGGTATTGCACACTC+TGG | + | chr5_2:5220451-5220470 | Msa0751740:CDS | 50.0% | |
GTGCCCGACTTTATTAGGGT+AGG | + | chr5_2:5220683-5220702 | Msa0751740:CDS | 50.0% | |
CCCGACTTTATTAGGGTAGG+TGG | + | chr5_2:5220686-5220705 | Msa0751740:CDS | 50.0% | |
GGCAACAAAAGGGTTCAAGG+CGG | - | chr5_2:5220798-5220817 | None:intergenic | 50.0% | |
GAGCCAAAGCAACTCGTCTT+TGG | - | chr5_2:5221247-5221266 | None:intergenic | 50.0% | |
AGTCGAGCATCTGTTCATGC+AGG | + | chr5_2:5221427-5221446 | Msa0751740:intron | 50.0% | |
GTCGAGCATCTGTTCATGCA+GGG | + | chr5_2:5221428-5221447 | Msa0751740:intron | 50.0% | |
TGCCCTAAGCAGCAACTTGA+TGG | + | chr5_2:5221484-5221503 | Msa0751740:CDS | 50.0% | |
! | GCACCATCAAGTTGCTGCTT+AGG | - | chr5_2:5221490-5221509 | None:intergenic | 50.0% |
! | TAAGCTAACCTGCGGTGTTG+GGG | - | chr5_2:5221578-5221597 | None:intergenic | 50.0% |
GAATATGCGCAAACAGGGTG+AGG | - | chr5_2:5222093-5222112 | None:intergenic | 50.0% | |
CTCTTGGCAAATAGCAGCCA+TGG | + | chr5_2:5222143-5222162 | Msa0751740:intron | 50.0% | |
ACCACCACCACAATCTTCCA+TGG | - | chr5_2:5222163-5222182 | None:intergenic | 50.0% | |
CTGTGGATGGAATACCATGG+CGG | - | chr5_2:5222260-5222279 | None:intergenic | 50.0% | |
CGACTGTGGATGGAATACCA+TGG | - | chr5_2:5222263-5222282 | None:intergenic | 50.0% | |
GATATTGATCAGCTGCTCGG+AGG | - | chr5_2:5223196-5223215 | None:intergenic | 50.0% | |
AAAGGGGAACTCCAACATCC+AGG | + | chr5_2:5223810-5223829 | Msa0751740:CDS | 50.0% | |
!! | GAACAGACACCACTTGGTGT+TGG | - | chr5_2:5223956-5223975 | None:intergenic | 50.0% |
! | AGAAAGTTGCGTTGATGGGC+TGG | + | chr5_2:5224205-5224224 | Msa0751740:three_prime_UTR | 50.0% |
!! | CGTTGATGGGCTGGTTATGT+AGG | + | chr5_2:5224214-5224233 | Msa0751740:three_prime_UTR | 50.0% |
AGAGAGAGAGAGAGAGGGAG+AGG | + | chr5_2:5214773-5214792 | Msa0751740:five_prime_UTR | 55.0% | |
CAGATCTCCCTTCCTCTCAC+CGG | + | chr5_2:5214911-5214930 | Msa0751740:CDS | 55.0% | |
! | AAGATCAGCGAGAGCGTGAG+TGG | - | chr5_2:5215038-5215057 | None:intergenic | 55.0% |
! | GCCGTTGCCGTTTGAACATG+AGG | + | chr5_2:5215244-5215263 | Msa0751740:CDS | 55.0% |
!! | GCTAAGTGGGGTTGGCTACA+TGG | - | chr5_2:5215801-5215820 | None:intergenic | 55.0% |
TGTAGCCAACCCCACTTAGC+AGG | + | chr5_2:5215801-5215820 | Msa0751740:intron | 55.0% | |
TGCTGGTGCATTACGAACCC+TGG | + | chr5_2:5216884-5216903 | Msa0751740:CDS | 55.0% | |
AGGGTTGCAGAAGGGGGTAA+AGG | - | chr5_2:5217348-5217367 | None:intergenic | 55.0% | |
TGAGGGTAGGGTTGCAGAAG+GGG | - | chr5_2:5217355-5217374 | None:intergenic | 55.0% | |
GTTGAGGGTAGGGTTGCAGA+AGG | - | chr5_2:5217357-5217376 | None:intergenic | 55.0% | |
!! | CCTCTGGCTTTCAGAGCAAC+AGG | - | chr5_2:5217523-5217542 | None:intergenic | 55.0% |
!! | CCTGTTGCTCTGAAAGCCAG+AGG | + | chr5_2:5217520-5217539 | Msa0751740:CDS | 55.0% |
! | GGAGCGCTCTTCTTTCGTAC+TGG | - | chr5_2:5217933-5217952 | None:intergenic | 55.0% |
TGCATTGGGGAGATTGGCAC+AGG | + | chr5_2:5218237-5218256 | Msa0751740:CDS | 55.0% | |
GGAATAGGGCAACAGAGCAG+AGG | + | chr5_2:5219718-5219737 | Msa0751740:intron | 55.0% | |
GCTGGTATTGCACACTCTGG+CGG | + | chr5_2:5220454-5220473 | Msa0751740:CDS | 55.0% | |
AGCATCTGTTCATGCAGGGC+TGG | + | chr5_2:5221432-5221451 | Msa0751740:intron | 55.0% | |
!! | GCAGCAACTTGATGGTGCTG+TGG | + | chr5_2:5221492-5221511 | Msa0751740:CDS | 55.0% |
GATGGAGGAGCAGCATCTAC+AGG | - | chr5_2:5221556-5221575 | None:intergenic | 55.0% | |
GCAGCCATGGAAGATTGTGG+TGG | + | chr5_2:5222156-5222175 | Msa0751740:intron | 55.0% | |
GCCATGGAAGATTGTGGTGG+TGG | + | chr5_2:5222159-5222178 | Msa0751740:intron | 55.0% | |
CACATGCTACGCCTGGATGT+TGG | - | chr5_2:5223824-5223843 | None:intergenic | 55.0% | |
AGAATGGCACATGCTACGCC+TGG | - | chr5_2:5223831-5223850 | None:intergenic | 55.0% | |
AGCGTCTCCGGTGAGAGGAA+GGG | - | chr5_2:5214921-5214940 | None:intergenic | 60.0% | |
AGCGTGAGTGGCGCGTTTAG+CGG | - | chr5_2:5215026-5215045 | None:intergenic | 60.0% | |
GAGGGTAGGGTTGCAGAAGG+GGG | - | chr5_2:5217354-5217373 | None:intergenic | 60.0% | |
TGTCTAACCCGGGCAACGCA+GGG | - | chr5_2:5218523-5218542 | None:intergenic | 60.0% | |
ATGTCTAACCCGGGCAACGC+AGG | - | chr5_2:5218524-5218543 | None:intergenic | 60.0% | |
! | CTAACCTGCGGTGTTGGGGA+TGG | - | chr5_2:5221574-5221593 | None:intergenic | 60.0% |
GAGCGTCTCCGGTGAGAGGA+AGG | - | chr5_2:5214922-5214941 | None:intergenic | 65.0% | |
AACAGCGTCGCGAGCGTCTC+CGG | - | chr5_2:5214933-5214952 | None:intergenic | 65.0% | |
TCCTCCATCCCCAACACCGC+AGG | + | chr5_2:5221567-5221586 | Msa0751740:CDS | 65.0% | |
! | ACCTGCGGTGTTGGGGATGG+AGG | - | chr5_2:5221571-5221590 | None:intergenic | 65.0% |
TCGCGAGCGTCTCCGGTGAG+AGG | - | chr5_2:5214926-5214945 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 5214692 | 5224531 | 5214692 | ID=Msa0751740;Name=Msa0751740 |
chr5_2 | mRNA | 5214692 | 5224531 | 5214692 | ID=Msa0751740-mRNA-1;Parent=Msa0751740;Name=Msa0751740-mRNA-1;_AED=0.10;_eAED=0.10;_QI=141|0.94|0.94|1|1|1|19|694|732 |
chr5_2 | exon | 5214692 | 5215067 | 5214692 | ID=Msa0751740-mRNA-1:exon:2106;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5215153 | 5215310 | 5215153 | ID=Msa0751740-mRNA-1:exon:2107;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5216558 | 5216730 | 5216558 | ID=Msa0751740-mRNA-1:exon:2108;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5216815 | 5216935 | 5216815 | ID=Msa0751740-mRNA-1:exon:2109;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5217032 | 5217106 | 5217032 | ID=Msa0751740-mRNA-1:exon:2110;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5217203 | 5217297 | 5217203 | ID=Msa0751740-mRNA-1:exon:2111;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5217425 | 5217593 | 5217425 | ID=Msa0751740-mRNA-1:exon:2112;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5218151 | 5218258 | 5218151 | ID=Msa0751740-mRNA-1:exon:2113;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5220439 | 5220567 | 5220439 | ID=Msa0751740-mRNA-1:exon:2114;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5220677 | 5220745 | 5220677 | ID=Msa0751740-mRNA-1:exon:2115;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5220940 | 5220999 | 5220940 | ID=Msa0751740-mRNA-1:exon:2116;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5221197 | 5221320 | 5221197 | ID=Msa0751740-mRNA-1:exon:2117;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5221449 | 5221588 | 5221449 | ID=Msa0751740-mRNA-1:exon:2118;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5222456 | 5222519 | 5222456 | ID=Msa0751740-mRNA-1:exon:2119;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5222652 | 5222731 | 5222652 | ID=Msa0751740-mRNA-1:exon:2120;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5223000 | 5223064 | 5223000 | ID=Msa0751740-mRNA-1:exon:2121;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5223142 | 5223259 | 5223142 | ID=Msa0751740-mRNA-1:exon:2122;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5223354 | 5223478 | 5223354 | ID=Msa0751740-mRNA-1:exon:2123;Parent=Msa0751740-mRNA-1 |
chr5_2 | exon | 5223747 | 5224531 | 5223747 | ID=Msa0751740-mRNA-1:exon:2124;Parent=Msa0751740-mRNA-1 |
chr5_2 | five_prime_UTR | 5214692 | 5214832 | 5214692 | ID=Msa0751740-mRNA-1:five_prime_utr;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5214833 | 5215067 | 5214833 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5215153 | 5215310 | 5215153 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5216558 | 5216730 | 5216558 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5216815 | 5216935 | 5216815 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5217032 | 5217106 | 5217032 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5217203 | 5217297 | 5217203 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5217425 | 5217593 | 5217425 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5218151 | 5218258 | 5218151 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5220439 | 5220567 | 5220439 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5220677 | 5220745 | 5220677 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5220940 | 5220999 | 5220940 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5221197 | 5221320 | 5221197 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5221449 | 5221588 | 5221449 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5222456 | 5222519 | 5222456 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5222652 | 5222731 | 5222652 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5223000 | 5223064 | 5223000 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5223142 | 5223259 | 5223142 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5223354 | 5223478 | 5223354 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | CDS | 5223747 | 5223837 | 5223747 | ID=Msa0751740-mRNA-1:cds;Parent=Msa0751740-mRNA-1 |
chr5_2 | three_prime_UTR | 5223838 | 5224531 | 5223838 | ID=Msa0751740-mRNA-1:three_prime_utr;Parent=Msa0751740-mRNA-1 |
Gene Sequence |
Protein sequence |