Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0751770 | sp|F4J9M5|CHR12_ARATH | 72.919 | 997 | 252 | 6 | 4 | 988 | 110 | 1100 | 0.0 | 1437 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0751770 | G7K2A2 | 99.293 | 990 | 7 | 0 | 1 | 990 | 74 | 1063 | 0.0 | 2037 |
Gene ID | Type | Classification |
---|---|---|
Msa0751770 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0749460 | Msa0751770 | 0.879721 | 9.891214e-70 | -8.615850e-47 |
Msa0751770 | Msa1020710 | 0.802228 | 6.198273e-49 | -8.615850e-47 |
Msa0751770 | Msa1371960 | 0.884867 | 1.328682e-71 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0751770 | MtrunA17_Chr5g0394201 | 99.293 | 990 | 7 | 0 | 1 | 990 | 74 | 1063 | 0.0 | 2037 |
Msa0751770 | MtrunA17_Chr1g0205891 | 81.936 | 1002 | 165 | 6 | 1 | 987 | 79 | 1079 | 0.0 | 1660 |
Msa0751770 | MtrunA17_Chr4g0066651 | 44.832 | 745 | 369 | 13 | 96 | 812 | 791 | 1521 | 0.0 | 632 |
Msa0751770 | MtrunA17_Chr4g0066741 | 47.628 | 527 | 254 | 8 | 277 | 796 | 176 | 687 | 4.62e-162 | 504 |
Msa0751770 | MtrunA17_Chr7g0248031 | 39.490 | 785 | 375 | 14 | 144 | 843 | 827 | 1596 | 2.28e-156 | 510 |
Msa0751770 | MtrunA17_Chr8g0348721 | 40.970 | 742 | 354 | 13 | 144 | 807 | 821 | 1556 | 1.82e-152 | 499 |
Msa0751770 | MtrunA17_Chr2g0286291 | 46.869 | 527 | 258 | 8 | 277 | 796 | 179 | 690 | 2.38e-151 | 476 |
Msa0751770 | MtrunA17_Chr5g0403921 | 44.118 | 510 | 248 | 9 | 284 | 768 | 178 | 675 | 7.25e-136 | 426 |
Msa0751770 | MtrunA17_Chr3g0095091 | 46.640 | 491 | 233 | 7 | 277 | 749 | 558 | 1037 | 7.61e-131 | 433 |
Msa0751770 | MtrunA17_Chr5g0442141 | 47.475 | 495 | 223 | 7 | 277 | 749 | 604 | 1083 | 2.49e-129 | 429 |
Msa0751770 | MtrunA17_Chr3g0137091 | 39.399 | 599 | 299 | 12 | 255 | 823 | 262 | 826 | 2.72e-114 | 384 |
Msa0751770 | MtrunA17_Chr7g0232121 | 39.959 | 493 | 254 | 10 | 290 | 747 | 39 | 524 | 2.35e-108 | 357 |
Msa0751770 | MtrunA17_Chr4g0052341 | 41.491 | 523 | 260 | 14 | 280 | 780 | 735 | 1233 | 7.89e-106 | 363 |
Msa0751770 | MtrunA17_Chr1g0163011 | 36.881 | 545 | 241 | 15 | 290 | 750 | 195 | 720 | 1.73e-86 | 294 |
Msa0751770 | MtrunA17_Chr1g0183681 | 33.212 | 548 | 284 | 18 | 268 | 749 | 353 | 884 | 1.81e-73 | 265 |
Msa0751770 | MtrunA17_Chr1g0175191 | 43.506 | 308 | 166 | 4 | 279 | 584 | 511 | 812 | 2.39e-71 | 259 |
Msa0751770 | MtrunA17_Chr1g0175191 | 55.696 | 158 | 69 | 1 | 598 | 755 | 1061 | 1217 | 8.02e-50 | 192 |
Msa0751770 | MtrunA17_Chr4g0017211 | 32.821 | 521 | 285 | 13 | 290 | 750 | 1450 | 1965 | 6.85e-71 | 258 |
Msa0751770 | MtrunA17_Chr5g0393461 | 34.442 | 511 | 278 | 14 | 290 | 749 | 184 | 688 | 2.54e-70 | 252 |
Msa0751770 | MtrunA17_Chr7g0257101 | 38.585 | 311 | 175 | 4 | 285 | 582 | 573 | 880 | 9.54e-68 | 248 |
Msa0751770 | MtrunA17_Chr7g0257101 | 50.943 | 159 | 77 | 1 | 593 | 751 | 1186 | 1343 | 7.55e-41 | 164 |
Msa0751770 | MtrunA17_Chr8g0384531 | 31.261 | 595 | 303 | 20 | 240 | 757 | 323 | 888 | 7.83e-67 | 244 |
Msa0751770 | MtrunA17_Chr7g0231521 | 48.454 | 194 | 87 | 3 | 567 | 747 | 252 | 445 | 1.94e-46 | 179 |
Msa0751770 | MtrunA17_Chr7g0231521 | 38.806 | 201 | 113 | 2 | 290 | 480 | 39 | 239 | 9.45e-44 | 171 |
Msa0751770 | MtrunA17_Chr4g0069451 | 26.071 | 537 | 335 | 18 | 269 | 778 | 154 | 655 | 6.08e-35 | 142 |
Msa0751770 | MtrunA17_Chr4g0040301 | 37.308 | 260 | 137 | 7 | 598 | 835 | 379 | 634 | 2.99e-32 | 134 |
Msa0751770 | MtrunA17_Chr4g0040301 | 27.986 | 293 | 182 | 11 | 318 | 587 | 18 | 304 | 3.22e-23 | 106 |
Msa0751770 | MtrunA17_Chr2g0296421 | 26.434 | 488 | 307 | 18 | 286 | 731 | 507 | 984 | 5.85e-30 | 128 |
Msa0751770 | MtrunA17_Chr1g0168031 | 27.353 | 340 | 180 | 11 | 311 | 601 | 535 | 856 | 2.98e-25 | 113 |
Msa0751770 | MtrunA17_Chr1g0168031 | 36.000 | 150 | 93 | 2 | 594 | 741 | 982 | 1130 | 4.91e-18 | 90.1 |
Msa0751770 | MtrunA17_Chr8g0352361 | 24.536 | 485 | 321 | 17 | 286 | 731 | 357 | 835 | 5.89e-25 | 112 |
Msa0751770 | MtrunA17_Chr7g0232971 | 27.467 | 375 | 209 | 14 | 415 | 750 | 904 | 1254 | 1.25e-24 | 111 |
Msa0751770 | MtrunA17_Chr1g0190381 | 36.612 | 183 | 103 | 2 | 598 | 767 | 187 | 369 | 8.68e-24 | 107 |
Msa0751770 | MtrunA17_Chr7g0224051 | 24.821 | 560 | 298 | 18 | 307 | 768 | 565 | 1099 | 1.42e-23 | 107 |
Msa0751770 | MtrunA17_Chr7g0264371 | 26.852 | 432 | 258 | 14 | 338 | 744 | 327 | 725 | 1.36e-21 | 101 |
Msa0751770 | MtrunA17_Chr3g0086111 | 23.589 | 496 | 296 | 19 | 290 | 725 | 187 | 659 | 3.49e-21 | 100 |
Msa0751770 | MtrunA17_Chr7g0233031 | 23.234 | 538 | 287 | 18 | 289 | 730 | 674 | 1181 | 8.25e-21 | 99.0 |
Msa0751770 | MtrunA17_Chr7g0225791 | 22.878 | 542 | 298 | 17 | 282 | 731 | 710 | 1223 | 8.81e-21 | 99.0 |
Msa0751770 | MtrunA17_Chr7g0233021 | 26.000 | 350 | 203 | 11 | 415 | 730 | 841 | 1168 | 1.64e-20 | 98.2 |
Msa0751770 | MtrunA17_Chr7g0232991 | 26.866 | 335 | 220 | 9 | 415 | 732 | 272 | 598 | 2.46e-20 | 96.7 |
Msa0751770 | MtrunA17_Chr2g0320751 | 36.029 | 136 | 84 | 2 | 608 | 741 | 859 | 993 | 4.49e-20 | 96.7 |
Msa0751770 | MtrunA17_Chr2g0320751 | 23.148 | 432 | 196 | 13 | 289 | 601 | 331 | 745 | 6.65e-20 | 95.9 |
Msa0751770 | MtrunA17_Chr7g0255821 | 37.584 | 149 | 90 | 2 | 595 | 740 | 644 | 792 | 7.56e-20 | 95.5 |
Msa0751770 | MtrunA17_Chr7g0255821 | 26.459 | 257 | 155 | 6 | 311 | 547 | 251 | 493 | 9.31e-14 | 75.9 |
Msa0751770 | MtrunA17_Chr3g0114161 | 23.956 | 551 | 320 | 18 | 306 | 768 | 691 | 1230 | 1.17e-19 | 95.5 |
Msa0751770 | MtrunA17_Chr5g0437621 | 24.630 | 540 | 317 | 17 | 312 | 768 | 754 | 1286 | 1.91e-19 | 94.7 |
Msa0751770 | MtrunA17_Chr4g0024921 | 38.462 | 130 | 77 | 2 | 612 | 740 | 779 | 906 | 6.92e-19 | 92.4 |
Msa0751770 | MtrunA17_Chr1g0149871 | 40.000 | 115 | 59 | 2 | 256 | 370 | 218 | 322 | 8.50e-19 | 89.0 |
Msa0751770 | MtrunA17_Chr4g0039561 | 44.660 | 103 | 52 | 2 | 557 | 654 | 39 | 141 | 1.04e-18 | 85.5 |
Msa0751770 | MtrunA17_Chr4g0047081 | 23.782 | 349 | 216 | 9 | 415 | 731 | 843 | 1173 | 2.16e-17 | 87.8 |
Msa0751770 | MtrunA17_Chr7g0233001 | 24.138 | 348 | 216 | 8 | 415 | 731 | 128 | 458 | 2.94e-17 | 86.3 |
Msa0751770 | MtrunA17_Chr1g0191141 | 23.177 | 617 | 365 | 20 | 245 | 768 | 485 | 1085 | 3.77e-17 | 87.0 |
Msa0751770 | MtrunA17_Chr1g0212331 | 34.641 | 153 | 96 | 2 | 617 | 766 | 887 | 1038 | 4.16e-17 | 87.0 |
Msa0751770 | MtrunA17_Chr1g0212331 | 27.083 | 192 | 118 | 5 | 407 | 587 | 522 | 702 | 2.59e-13 | 74.7 |
Msa0751770 | MtrunA17_Chr2g0281601 | 37.008 | 127 | 77 | 2 | 615 | 740 | 1148 | 1272 | 1.57e-16 | 85.1 |
Msa0751770 | MtrunA17_Chr1g0190391 | 29.185 | 233 | 128 | 8 | 275 | 476 | 569 | 795 | 2.73e-15 | 80.9 |
Msa0751770 | MtrunA17_Chr2g0320781 | 33.333 | 120 | 75 | 2 | 617 | 731 | 111 | 230 | 2.30e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0751770 | AT3G06010.1 | 72.919 | 997 | 252 | 6 | 4 | 988 | 110 | 1100 | 0.0 | 1437 |
Msa0751770 | AT5G19310.1 | 68.756 | 989 | 278 | 8 | 2 | 985 | 96 | 1058 | 0.0 | 1335 |
Msa0751770 | AT5G19310.2 | 68.620 | 819 | 226 | 8 | 172 | 985 | 2 | 794 | 0.0 | 1108 |
Msa0751770 | AT2G28290.6 | 44.052 | 765 | 377 | 16 | 81 | 812 | 541 | 1287 | 0.0 | 604 |
Msa0751770 | AT2G28290.3 | 44.052 | 765 | 377 | 16 | 81 | 812 | 540 | 1286 | 0.0 | 603 |
Msa0751770 | AT2G28290.2 | 44.052 | 765 | 377 | 16 | 81 | 812 | 540 | 1286 | 0.0 | 603 |
Msa0751770 | AT2G28290.1 | 44.052 | 765 | 377 | 16 | 81 | 812 | 540 | 1286 | 0.0 | 603 |
Msa0751770 | AT2G28290.5 | 44.052 | 765 | 377 | 16 | 81 | 812 | 541 | 1287 | 0.0 | 603 |
Msa0751770 | AT2G28290.4 | 44.052 | 765 | 377 | 16 | 81 | 812 | 540 | 1286 | 0.0 | 603 |
Msa0751770 | AT2G46020.5 | 40.157 | 762 | 376 | 14 | 144 | 831 | 815 | 1570 | 2.05e-154 | 504 |
Msa0751770 | AT2G46020.1 | 40.157 | 762 | 376 | 14 | 144 | 831 | 815 | 1570 | 2.05e-154 | 504 |
Msa0751770 | AT2G46020.6 | 40.157 | 762 | 376 | 14 | 144 | 831 | 815 | 1570 | 2.05e-154 | 504 |
Msa0751770 | AT2G46020.2 | 40.026 | 762 | 378 | 13 | 144 | 831 | 815 | 1571 | 4.68e-154 | 503 |
Msa0751770 | AT2G46020.3 | 40.026 | 762 | 378 | 13 | 144 | 831 | 815 | 1571 | 4.68e-154 | 503 |
Msa0751770 | AT2G46020.4 | 40.026 | 762 | 378 | 13 | 144 | 831 | 815 | 1571 | 4.68e-154 | 503 |
Msa0751770 | AT3G06400.2 | 47.036 | 523 | 255 | 8 | 281 | 796 | 181 | 688 | 7.80e-151 | 475 |
Msa0751770 | AT3G06400.3 | 47.036 | 523 | 255 | 8 | 281 | 796 | 181 | 688 | 9.45e-151 | 474 |
Msa0751770 | AT3G06400.1 | 47.036 | 523 | 255 | 8 | 281 | 796 | 181 | 688 | 1.03e-150 | 474 |
Msa0751770 | AT5G18620.2 | 47.238 | 525 | 251 | 9 | 281 | 796 | 186 | 693 | 1.67e-150 | 474 |
Msa0751770 | AT5G18620.1 | 47.238 | 525 | 251 | 9 | 281 | 796 | 186 | 693 | 1.80e-150 | 474 |
Msa0751770 | AT5G66750.1 | 43.925 | 535 | 273 | 11 | 284 | 795 | 196 | 726 | 4.87e-133 | 419 |
Msa0751770 | AT2G13370.1 | 46.626 | 489 | 234 | 6 | 277 | 749 | 612 | 1089 | 2.13e-128 | 427 |
Msa0751770 | AT2G13370.2 | 46.626 | 489 | 234 | 6 | 277 | 749 | 612 | 1089 | 2.13e-128 | 427 |
Msa0751770 | AT2G13370.3 | 46.626 | 489 | 234 | 6 | 277 | 749 | 612 | 1089 | 2.13e-128 | 427 |
Msa0751770 | AT2G25170.1 | 41.412 | 524 | 258 | 10 | 282 | 777 | 266 | 768 | 5.74e-113 | 380 |
Msa0751770 | AT2G25170.4 | 41.412 | 524 | 258 | 10 | 282 | 777 | 266 | 768 | 5.74e-113 | 380 |
Msa0751770 | AT2G25170.2 | 41.412 | 524 | 258 | 10 | 282 | 777 | 283 | 785 | 9.45e-113 | 379 |
Msa0751770 | AT2G25170.3 | 41.412 | 524 | 258 | 10 | 282 | 777 | 292 | 794 | 1.12e-112 | 379 |
Msa0751770 | AT2G44980.1 | 41.860 | 473 | 255 | 9 | 290 | 748 | 51 | 517 | 4.73e-110 | 361 |
Msa0751770 | AT2G44980.3 | 40.041 | 487 | 262 | 7 | 290 | 748 | 51 | 535 | 5.67e-110 | 361 |
Msa0751770 | AT2G44980.2 | 39.754 | 488 | 263 | 8 | 290 | 748 | 51 | 536 | 1.81e-107 | 355 |
Msa0751770 | AT5G44800.1 | 40.341 | 528 | 271 | 11 | 278 | 784 | 677 | 1181 | 6.23e-103 | 355 |
Msa0751770 | AT4G31900.3 | 40.504 | 516 | 254 | 15 | 282 | 780 | 218 | 697 | 9.10e-102 | 346 |
Msa0751770 | AT4G31900.2 | 40.504 | 516 | 254 | 15 | 282 | 780 | 177 | 656 | 1.03e-101 | 345 |
Msa0751770 | AT4G31900.1 | 40.741 | 513 | 251 | 15 | 282 | 777 | 218 | 694 | 1.17e-101 | 345 |
Msa0751770 | AT2G02090.1 | 36.929 | 547 | 242 | 14 | 290 | 752 | 213 | 740 | 4.02e-87 | 296 |
Msa0751770 | AT3G12810.2 | 38.228 | 395 | 204 | 4 | 227 | 584 | 432 | 823 | 3.86e-73 | 266 |
Msa0751770 | AT3G12810.2 | 53.797 | 158 | 72 | 1 | 598 | 755 | 1070 | 1226 | 3.30e-47 | 185 |
Msa0751770 | AT3G12810.1 | 38.228 | 395 | 204 | 4 | 227 | 584 | 436 | 827 | 4.43e-73 | 265 |
Msa0751770 | AT3G12810.1 | 53.797 | 158 | 72 | 1 | 598 | 755 | 1074 | 1230 | 3.77e-47 | 184 |
Msa0751770 | AT2G18760.4 | 32.475 | 505 | 277 | 12 | 293 | 749 | 388 | 876 | 3.29e-72 | 261 |
Msa0751770 | AT2G18760.1 | 32.475 | 505 | 277 | 12 | 293 | 749 | 388 | 876 | 3.29e-72 | 261 |
Msa0751770 | AT2G18760.2 | 32.475 | 505 | 277 | 12 | 293 | 749 | 388 | 876 | 3.29e-72 | 261 |
Msa0751770 | AT2G18760.7 | 32.475 | 505 | 277 | 12 | 293 | 749 | 388 | 876 | 3.29e-72 | 261 |
Msa0751770 | AT2G18760.5 | 32.475 | 505 | 277 | 12 | 293 | 749 | 388 | 876 | 3.29e-72 | 261 |
Msa0751770 | AT2G18760.6 | 32.475 | 505 | 277 | 12 | 293 | 749 | 388 | 876 | 3.29e-72 | 261 |
Msa0751770 | AT2G18760.3 | 32.475 | 505 | 277 | 12 | 293 | 749 | 447 | 935 | 7.94e-72 | 260 |
Msa0751770 | AT3G19210.3 | 34.774 | 509 | 279 | 15 | 290 | 749 | 180 | 684 | 9.45e-72 | 254 |
Msa0751770 | AT3G54280.1 | 33.588 | 524 | 280 | 14 | 289 | 750 | 1450 | 1967 | 1.71e-71 | 260 |
Msa0751770 | AT3G19210.2 | 34.911 | 507 | 279 | 14 | 290 | 749 | 180 | 682 | 2.11e-71 | 255 |
Msa0751770 | AT3G54280.2 | 33.588 | 524 | 280 | 14 | 289 | 750 | 1481 | 1998 | 2.54e-71 | 260 |
Msa0751770 | AT3G19210.1 | 34.774 | 509 | 279 | 15 | 290 | 749 | 180 | 684 | 5.16e-71 | 254 |
Msa0751770 | AT3G57300.3 | 30.461 | 499 | 304 | 11 | 118 | 585 | 405 | 891 | 3.04e-68 | 249 |
Msa0751770 | AT3G57300.1 | 30.461 | 499 | 304 | 11 | 118 | 585 | 405 | 891 | 3.41e-68 | 250 |
Msa0751770 | AT3G57300.1 | 52.597 | 154 | 72 | 1 | 598 | 751 | 1205 | 1357 | 1.10e-40 | 164 |
Msa0751770 | AT3G57300.4 | 30.461 | 499 | 304 | 11 | 118 | 585 | 405 | 891 | 3.41e-68 | 250 |
Msa0751770 | AT3G57300.4 | 52.597 | 154 | 72 | 1 | 598 | 751 | 1205 | 1357 | 1.10e-40 | 164 |
Msa0751770 | AT5G63950.1 | 32.849 | 551 | 267 | 20 | 290 | 766 | 377 | 898 | 4.12e-67 | 245 |
Msa0751770 | AT3G57300.2 | 28.571 | 532 | 304 | 11 | 118 | 585 | 405 | 924 | 5.19e-64 | 237 |
Msa0751770 | AT3G57300.2 | 52.597 | 154 | 72 | 1 | 598 | 751 | 1238 | 1390 | 1.15e-40 | 164 |
Msa0751770 | AT5G63950.2 | 32.657 | 542 | 263 | 19 | 290 | 766 | 377 | 881 | 7.61e-64 | 235 |
Msa0751770 | AT1G03750.1 | 31.769 | 277 | 167 | 7 | 293 | 553 | 142 | 412 | 3.46e-35 | 145 |
Msa0751770 | AT1G03750.1 | 43.915 | 189 | 100 | 4 | 595 | 781 | 524 | 708 | 5.12e-33 | 138 |
Msa0751770 | AT1G48310.1 | 26.458 | 480 | 298 | 15 | 282 | 741 | 165 | 609 | 1.28e-33 | 139 |
Msa0751770 | AT1G48310.2 | 26.458 | 480 | 298 | 15 | 282 | 741 | 170 | 614 | 1.70e-33 | 138 |
Msa0751770 | AT1G48310.3 | 26.458 | 480 | 298 | 15 | 282 | 741 | 165 | 609 | 2.65e-33 | 137 |
Msa0751770 | AT5G43530.1 | 27.000 | 400 | 187 | 14 | 280 | 587 | 607 | 993 | 6.68e-26 | 115 |
Msa0751770 | AT5G43530.1 | 36.667 | 150 | 90 | 3 | 596 | 741 | 1106 | 1254 | 9.18e-20 | 96.3 |
Msa0751770 | AT2G21450.1 | 25.577 | 520 | 301 | 16 | 289 | 740 | 264 | 765 | 5.58e-24 | 109 |
Msa0751770 | AT2G21450.2 | 25.388 | 516 | 307 | 15 | 289 | 740 | 271 | 772 | 6.15e-24 | 108 |
Msa0751770 | AT2G21450.3 | 25.577 | 520 | 301 | 16 | 289 | 740 | 173 | 674 | 1.02e-23 | 108 |
Msa0751770 | AT2G16390.2 | 25.889 | 506 | 294 | 20 | 286 | 731 | 349 | 833 | 1.28e-23 | 108 |
Msa0751770 | AT2G16390.1 | 25.889 | 506 | 294 | 20 | 286 | 731 | 346 | 830 | 1.50e-23 | 108 |
Msa0751770 | AT1G08600.1 | 41.463 | 164 | 83 | 3 | 598 | 748 | 1093 | 1256 | 1.70e-23 | 108 |
Msa0751770 | AT1G08600.1 | 24.779 | 339 | 208 | 10 | 269 | 579 | 699 | 1018 | 1.30e-19 | 95.9 |
Msa0751770 | AT1G08600.4 | 41.463 | 164 | 83 | 3 | 598 | 748 | 1114 | 1277 | 1.83e-23 | 108 |
Msa0751770 | AT1G08600.4 | 24.929 | 353 | 211 | 12 | 269 | 579 | 699 | 1039 | 2.90e-18 | 91.3 |
Msa0751770 | AT1G08600.3 | 41.463 | 164 | 83 | 3 | 598 | 748 | 1114 | 1277 | 1.83e-23 | 108 |
Msa0751770 | AT1G08600.3 | 24.929 | 353 | 211 | 12 | 269 | 579 | 699 | 1039 | 2.90e-18 | 91.3 |
Msa0751770 | AT1G08600.2 | 41.463 | 164 | 83 | 3 | 598 | 748 | 1114 | 1277 | 1.83e-23 | 108 |
Msa0751770 | AT1G08600.2 | 24.929 | 353 | 211 | 12 | 269 | 579 | 699 | 1039 | 2.90e-18 | 91.3 |
Msa0751770 | AT5G22750.1 | 37.671 | 146 | 88 | 2 | 598 | 741 | 862 | 1006 | 6.43e-23 | 106 |
Msa0751770 | AT5G22750.1 | 24.000 | 425 | 198 | 11 | 289 | 601 | 347 | 758 | 2.90e-22 | 103 |
Msa0751770 | AT1G05490.1 | 26.331 | 338 | 217 | 7 | 415 | 730 | 1008 | 1335 | 6.75e-21 | 99.8 |
Msa0751770 | AT5G05130.1 | 38.211 | 123 | 75 | 1 | 619 | 740 | 729 | 851 | 8.03e-20 | 95.9 |
Msa0751770 | AT5G20420.1 | 22.682 | 507 | 297 | 15 | 306 | 731 | 707 | 1199 | 1.59e-18 | 92.0 |
Msa0751770 | AT3G16600.1 | 28.283 | 297 | 151 | 11 | 267 | 517 | 28 | 308 | 3.53e-18 | 90.1 |
Msa0751770 | AT1G05120.2 | 36.923 | 130 | 79 | 2 | 612 | 740 | 720 | 847 | 1.76e-17 | 88.6 |
Msa0751770 | AT1G05120.1 | 36.923 | 130 | 79 | 2 | 612 | 740 | 677 | 804 | 1.82e-17 | 88.2 |
Msa0751770 | AT1G02670.7 | 27.794 | 349 | 187 | 15 | 272 | 581 | 106 | 428 | 3.14e-17 | 87.4 |
Msa0751770 | AT1G02670.7 | 37.600 | 125 | 75 | 2 | 617 | 740 | 516 | 638 | 3.60e-16 | 84.0 |
Msa0751770 | AT1G11100.3 | 36.641 | 131 | 78 | 3 | 614 | 741 | 971 | 1099 | 3.35e-17 | 87.8 |
Msa0751770 | AT1G11100.5 | 36.296 | 135 | 81 | 3 | 614 | 745 | 927 | 1059 | 3.40e-17 | 87.8 |
Msa0751770 | AT1G11100.5 | 23.575 | 386 | 212 | 14 | 262 | 579 | 369 | 739 | 1.03e-15 | 82.8 |
Msa0751770 | AT1G02670.1 | 27.714 | 350 | 186 | 15 | 272 | 581 | 117 | 439 | 3.65e-17 | 87.0 |
Msa0751770 | AT1G02670.1 | 37.600 | 125 | 75 | 2 | 617 | 740 | 527 | 649 | 3.93e-16 | 83.6 |
Msa0751770 | AT1G11100.1 | 36.641 | 131 | 78 | 3 | 614 | 741 | 1070 | 1198 | 4.23e-17 | 87.4 |
Msa0751770 | AT1G11100.1 | 23.575 | 386 | 212 | 14 | 262 | 579 | 512 | 882 | 6.89e-16 | 83.6 |
Msa0751770 | AT1G11100.4 | 36.641 | 131 | 78 | 3 | 614 | 741 | 1114 | 1242 | 4.37e-17 | 87.4 |
Msa0751770 | AT1G11100.2 | 36.641 | 131 | 78 | 3 | 614 | 741 | 1113 | 1241 | 4.41e-17 | 87.4 |
Msa0751770 | AT1G02670.3 | 37.600 | 125 | 75 | 2 | 617 | 740 | 539 | 661 | 2.39e-16 | 84.3 |
Msa0751770 | AT1G02670.3 | 25.337 | 371 | 191 | 14 | 272 | 581 | 106 | 451 | 3.67e-16 | 84.0 |
Msa0751770 | AT1G02670.6 | 37.600 | 125 | 75 | 2 | 617 | 740 | 512 | 634 | 2.41e-16 | 84.3 |
Msa0751770 | AT1G02670.6 | 25.337 | 371 | 191 | 14 | 272 | 581 | 79 | 424 | 3.40e-16 | 84.0 |
Msa0751770 | AT3G24340.1 | 25.075 | 335 | 205 | 10 | 415 | 724 | 744 | 1057 | 2.82e-16 | 84.7 |
Msa0751770 | AT1G50410.2 | 39.062 | 128 | 73 | 3 | 617 | 741 | 828 | 953 | 3.63e-16 | 84.3 |
Msa0751770 | AT1G50410.1 | 39.062 | 128 | 73 | 3 | 617 | 741 | 828 | 953 | 3.63e-16 | 84.3 |
Msa0751770 | AT1G50410.3 | 39.062 | 128 | 73 | 3 | 617 | 741 | 828 | 953 | 3.63e-16 | 84.3 |
Msa0751770 | AT1G61140.3 | 34.351 | 131 | 83 | 2 | 611 | 740 | 961 | 1089 | 4.12e-16 | 84.3 |
Msa0751770 | AT1G02670.4 | 25.337 | 371 | 191 | 14 | 272 | 581 | 106 | 451 | 4.21e-16 | 83.2 |
Msa0751770 | AT1G02670.5 | 25.337 | 371 | 191 | 14 | 272 | 581 | 79 | 424 | 4.54e-16 | 83.2 |
Msa0751770 | AT1G02670.5 | 37.736 | 106 | 63 | 2 | 617 | 721 | 512 | 615 | 4.02e-14 | 77.0 |
Msa0751770 | AT1G02670.2 | 25.337 | 371 | 191 | 14 | 272 | 581 | 106 | 451 | 5.36e-16 | 83.2 |
Msa0751770 | AT1G02670.2 | 37.736 | 106 | 63 | 2 | 617 | 721 | 539 | 642 | 4.24e-14 | 77.0 |
Msa0751770 | AT1G61140.1 | 34.351 | 131 | 83 | 2 | 611 | 740 | 1119 | 1247 | 5.81e-16 | 83.6 |
Msa0751770 | AT1G61140.1 | 26.702 | 191 | 119 | 5 | 407 | 586 | 782 | 962 | 9.20e-11 | 66.6 |
Msa0751770 | AT3G20010.3 | 37.600 | 125 | 75 | 2 | 617 | 740 | 628 | 750 | 6.60e-16 | 83.2 |
Msa0751770 | AT3G20010.2 | 37.600 | 125 | 75 | 2 | 617 | 740 | 603 | 725 | 7.12e-16 | 83.2 |
Msa0751770 | AT3G20010.1 | 37.600 | 125 | 75 | 2 | 617 | 740 | 894 | 1016 | 7.74e-16 | 83.2 |
Msa0751770 | AT3G20010.5 | 37.600 | 125 | 75 | 2 | 617 | 740 | 894 | 1016 | 7.74e-16 | 83.2 |
Msa0751770 | AT3G20010.7 | 37.600 | 125 | 75 | 2 | 617 | 740 | 894 | 1016 | 7.74e-16 | 83.2 |
Msa0751770 | AT1G48310.4 | 27.206 | 272 | 165 | 10 | 282 | 538 | 165 | 418 | 4.59e-14 | 76.6 |
Msa0751770 | AT3G42670.4 | 35.000 | 120 | 73 | 2 | 617 | 731 | 1076 | 1195 | 2.38e-11 | 68.6 |
Msa0751770 | AT3G42670.2 | 35.000 | 120 | 73 | 2 | 617 | 731 | 1074 | 1193 | 2.41e-11 | 68.6 |
Msa0751770 | AT3G42670.3 | 35.000 | 120 | 73 | 2 | 617 | 731 | 1074 | 1193 | 2.41e-11 | 68.6 |
Msa0751770 | AT3G42670.1 | 35.000 | 120 | 73 | 2 | 617 | 731 | 1074 | 1193 | 2.41e-11 | 68.6 |
Msa0751770 | AT1G08060.3 | 28.497 | 193 | 118 | 6 | 564 | 739 | 515 | 704 | 2.91e-11 | 68.6 |
Msa0751770 | AT5G07810.1 | 25.778 | 225 | 143 | 6 | 257 | 470 | 168 | 379 | 3.67e-11 | 68.2 |
Find 256 sgRNAs with CRISPR-Local
Find 528 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGAACTTGGTTCAAATATT+TGG | 0.065454 | 5_2:+5240032 | None:intergenic |
TATCCTTGATTTCATGTTTA+TGG | 0.066169 | 5_2:+5240229 | None:intergenic |
AAATAAACTGCTTGTAAATT+TGG | 0.073163 | 5_2:-5244814 | Msa0751770:CDS |
TAACAACTTAAATGGAATTT+TGG | 0.134286 | 5_2:-5244368 | Msa0751770:CDS |
CAAAGGCTGTTCTGCCAAAT+TGG | 0.141417 | 5_2:-5244246 | Msa0751770:CDS |
AAGTGCTTGCTCGAGCTTTA+TGG | 0.164806 | 5_2:-5246291 | Msa0751770:CDS |
TTGTTTAATAACAACTTAAA+TGG | 0.190073 | 5_2:-5244376 | Msa0751770:CDS |
AAATATTTGGGGAAAATTTC+TGG | 0.201388 | 5_2:+5240045 | None:intergenic |
CCCGATCAGATGAGGAATTT+TGG | 0.212503 | 5_2:-5240674 | Msa0751770:CDS |
AGAACTTGGTTCAAATATTT+GGG | 0.224809 | 5_2:+5240033 | None:intergenic |
TATAAATTTCTTAGACTTGA+TGG | 0.241436 | 5_2:-5241886 | Msa0751770:CDS |
GCGAACTCGTTGACCCAATT+TGG | 0.250076 | 5_2:+5244232 | None:intergenic |
TCCTGCAGGCTGTTCTGAAT+TGG | 0.251991 | 5_2:+5243121 | None:intergenic |
TTCAATACCATTTGATTGTT+TGG | 0.260111 | 5_2:+5244764 | None:intergenic |
CTTGCAGCTAGCGGAGTTAC+AGG | 0.263370 | 5_2:-5245829 | Msa0751770:intron |
ATCCTTGATTTCATGTTTAT+GGG | 0.272191 | 5_2:+5240230 | None:intergenic |
TTTGACAGCAGTGCTGTTAC+TGG | 0.285191 | 5_2:-5240528 | Msa0751770:CDS |
TTTGAAGAATGGAATTTCTA+AGG | 0.289082 | 5_2:-5244721 | Msa0751770:CDS |
GGTATACTCGGCACTAAATA+AGG | 0.290483 | 5_2:-5240568 | Msa0751770:CDS |
TGACCAGCTCTACGGAGTTT+TGG | 0.291315 | 5_2:+5241979 | None:intergenic |
GAATAGGTTTGCGTTGGAAC+TGG | 0.295028 | 5_2:-5246332 | Msa0751770:intron |
TGAACTGAATTGAAAATGTT+TGG | 0.299548 | 5_2:+5243070 | None:intergenic |
CCAACATTTCTCTTCTGTCC+TGG | 0.303549 | 5_2:+5240772 | None:intergenic |
AAGAACCTTGGATTTGTAAC+TGG | 0.305795 | 5_2:+5245349 | None:intergenic |
CAATTTGGCAGAACAGCCTT+TGG | 0.309438 | 5_2:+5244247 | None:intergenic |
TTATAATCTTTGACAGTGAT+TGG | 0.309963 | 5_2:-5241735 | Msa0751770:CDS |
GAGGAGATCGTCAGAGCATC+AGG | 0.326426 | 5_2:-5242030 | Msa0751770:CDS |
TTCGTTGATAGCACATCTTA+TGG | 0.327282 | 5_2:-5244308 | Msa0751770:CDS |
CAGCTTGTTGATCCATTTGT+GGG | 0.330204 | 5_2:+5241710 | None:intergenic |
GCAATAAAGGAAGAAATATC+AGG | 0.332857 | 5_2:-5244028 | Msa0751770:CDS |
GAGCATTGAATTTCTTTAGA+AGG | 0.333137 | 5_2:+5241836 | None:intergenic |
AATAAACTGCTTGTAAATTT+GGG | 0.333637 | 5_2:-5244813 | Msa0751770:CDS |
CCTGCAGGCTGTTCTGAATT+GGG | 0.337382 | 5_2:+5243122 | None:intergenic |
TGAGGAAGATGAGGATTTGA+TGG | 0.338325 | 5_2:-5244688 | Msa0751770:CDS |
CGGTTGCGGCGTCCTCCTTA+TGG | 0.340101 | 5_2:-5245717 | Msa0751770:CDS |
CTCAAAAGAAACATAAAATA+TGG | 0.341229 | 5_2:+5241805 | None:intergenic |
TTCATGCTTGAACCTCTTAG+AGG | 0.342322 | 5_2:+5240263 | None:intergenic |
AGCACTCGTGCCGGAGGTCT+TGG | 0.343590 | 5_2:-5241784 | Msa0751770:CDS |
AGAGGCAGGGGTCCCATAAA+AGG | 0.346733 | 5_2:+5240281 | None:intergenic |
TAATTGTTCTTCATCTGTTA+AGG | 0.351041 | 5_2:+5242997 | None:intergenic |
GGATGAGAGGAAAGCAATAA+AGG | 0.356920 | 5_2:-5244041 | Msa0751770:CDS |
TCCACTGGAGCCCTTCTATC+TGG | 0.361624 | 5_2:+5244407 | None:intergenic |
ACAGAGGAATGATGCTGTTC+AGG | 0.361881 | 5_2:-5245313 | Msa0751770:intron |
ATCCATTGAAGAGGTGATAT+TGG | 0.364015 | 5_2:-5241623 | Msa0751770:CDS |
CTTCATACTACGAAGGAAAA+AGG | 0.367311 | 5_2:-5242862 | Msa0751770:CDS |
CAACATTTCTCTTCTGTCCT+GGG | 0.367967 | 5_2:+5240773 | None:intergenic |
TCCATTTGAATTCTGCCCTC+TGG | 0.387404 | 5_2:+5240113 | None:intergenic |
TGGAAGTGAGCTCTGAATAT+TGG | 0.387815 | 5_2:-5245794 | Msa0751770:CDS |
AATAGGTTTGCGTTGGAACT+GGG | 0.388386 | 5_2:-5246331 | Msa0751770:intron |
TGGATGCTGATGATCAAATA+AGG | 0.389131 | 5_2:-5245674 | Msa0751770:CDS |
TTAAGACCATACCAGATAGA+AGG | 0.390339 | 5_2:-5244418 | Msa0751770:CDS |
TCTCCGCCTTGAAGCATAGA+TGG | 0.394799 | 5_2:+5244442 | None:intergenic |
GGAGCAATTAGGTCGTTGTT+TGG | 0.394871 | 5_2:+5246685 | None:intergenic |
GATTCAGATGCTTTGAAGAA+TGG | 0.397442 | 5_2:-5244732 | Msa0751770:CDS |
AACATAAAATATGGTGAGTC+AGG | 0.399420 | 5_2:+5241814 | None:intergenic |
CAGTCAAACAATTGCTTGTC+GGG | 0.399541 | 5_2:+5245750 | None:intergenic |
GAGGTAGAAAAGTTTCTTCC+TGG | 0.401155 | 5_2:-5242837 | Msa0751770:CDS |
AGATACTACCAAGTTCCTTC+TGG | 0.405687 | 5_2:-5239953 | Msa0751770:three_prime_UTR |
GAACTGAATTGAAAATGTTT+GGG | 0.406126 | 5_2:+5243071 | None:intergenic |
TCAGCTTGTTGATCCATTTG+TGG | 0.409812 | 5_2:+5241709 | None:intergenic |
GACAGTAGTGATTTACTTGA+AGG | 0.413401 | 5_2:-5244648 | Msa0751770:CDS |
GATTATTCGCCGTCTGCATC+AGG | 0.421572 | 5_2:-5242972 | Msa0751770:intron |
CGGCGTCCTCCTTATGGCAT+TGG | 0.427791 | 5_2:-5245711 | Msa0751770:CDS |
AGGATCGAGCCCATCGCATT+GGG | 0.428515 | 5_2:-5241687 | Msa0751770:CDS |
TAGCAAGAACCCTGGACAAC+AGG | 0.433497 | 5_2:-5243874 | Msa0751770:intron |
CAGTTCAAAATTTCGAGGAC+TGG | 0.435401 | 5_2:-5243054 | Msa0751770:CDS |
TGCTTGAACCTCTTAGAGGC+AGG | 0.435562 | 5_2:+5240267 | None:intergenic |
AAAGGCTGTTCTGCCAAATT+GGG | 0.437095 | 5_2:-5244245 | Msa0751770:CDS |
CATACATTCCATTCAAGAAA+AGG | 0.438102 | 5_2:-5244604 | Msa0751770:intron |
TTGGCTGATGAAATGGGGCT+TGG | 0.440597 | 5_2:-5244349 | Msa0751770:CDS |
ATGATCAAATAAGGAAGAAA+CGG | 0.445030 | 5_2:-5245665 | Msa0751770:CDS |
CCAAAATTCCTCATCTGATC+GGG | 0.448047 | 5_2:+5240674 | None:intergenic |
ATTTGATCTTTCATTTGCCA+TGG | 0.448854 | 5_2:+5240311 | None:intergenic |
AGCTTTAAAAGCTGATGATC+AGG | 0.449727 | 5_2:-5244901 | Msa0751770:CDS |
AGCACTGCTGTCAAAAGCTT+TGG | 0.450510 | 5_2:+5240536 | None:intergenic |
GGAACGTGCTAAACAAAAGA+TGG | 0.450637 | 5_2:-5241602 | Msa0751770:CDS |
CGTAGAGGTAGCAGCTCACT+TGG | 0.451293 | 5_2:-5240738 | Msa0751770:CDS |
AGAGAATGGATGAAGATAGA+AGG | 0.453244 | 5_2:-5240644 | Msa0751770:CDS |
GTGACCGACGTGGGCAGAGT+TGG | 0.454104 | 5_2:-5242753 | Msa0751770:CDS |
AATCGATTAACTCAGCTTGA+AGG | 0.454595 | 5_2:-5246608 | Msa0751770:intron |
TAACCATCCCTACCTCTTTG+TGG | 0.455021 | 5_2:-5242076 | Msa0751770:CDS |
ATCAAATGGTATTGAACCAT+TGG | 0.458543 | 5_2:-5244757 | Msa0751770:CDS |
ATGAGAACGAACTGCCAGAT+TGG | 0.458830 | 5_2:-5240590 | Msa0751770:CDS |
CTGTTGACGTTGTATTGAAA+AGG | 0.458968 | 5_2:+5241551 | None:intergenic |
CGACAAGCAATTGTTTGACT+GGG | 0.459694 | 5_2:-5245748 | Msa0751770:CDS |
ATGGAATACAAGGGTGTGAC+TGG | 0.459958 | 5_2:-5244289 | Msa0751770:CDS |
AAACATGAAATCAAGGATAC+AGG | 0.460250 | 5_2:-5240225 | Msa0751770:CDS |
ACTGGCCATACCTGTTGTCC+AGG | 0.460656 | 5_2:+5243864 | None:intergenic |
CCGACAAGCAATTGTTTGAC+TGG | 0.462855 | 5_2:-5245749 | Msa0751770:CDS |
GTTCTTGTTTAGGTTGATGA+AGG | 0.463663 | 5_2:-5246761 | Msa0751770:five_prime_UTR |
AAGATCAAGCTATCCTAGCC+AGG | 0.464234 | 5_2:-5240151 | Msa0751770:CDS |
GTTTCTTCCTGGTAAATCTC+AGG | 0.466003 | 5_2:-5242826 | Msa0751770:CDS |
AAGATGTGCTATCAACGAAA+TGG | 0.468227 | 5_2:+5244312 | None:intergenic |
GCCAGAGGGCAGAATTCAAA+TGG | 0.471047 | 5_2:-5240114 | Msa0751770:CDS |
TTCTCCTCTTCAAAGAACCT+TGG | 0.472374 | 5_2:+5245337 | None:intergenic |
TTCGAACTAGAGGAGCAATT+AGG | 0.472631 | 5_2:+5246674 | None:intergenic |
TGATCAAATAAGGAAGAAAC+GGG | 0.473142 | 5_2:-5245664 | Msa0751770:CDS |
TTCCCATAAACATGAAATCA+AGG | 0.474668 | 5_2:-5240232 | Msa0751770:CDS |
CCAGTCAAACAATTGCTTGT+CGG | 0.474883 | 5_2:+5245749 | None:intergenic |
GGATGAAGATAGAAGGCAAA+AGG | 0.476406 | 5_2:-5240637 | Msa0751770:CDS |
TACAACAGCCAGAAGGAACT+TGG | 0.477035 | 5_2:+5239945 | None:intergenic |
TGACCGACGTGGGCAGAGTT+GGG | 0.478099 | 5_2:-5242752 | Msa0751770:CDS |
GCCAAAATTCCTCATCTGAT+CGG | 0.480869 | 5_2:+5240673 | None:intergenic |
AGCATTGAATTTCTTTAGAA+GGG | 0.481468 | 5_2:+5241837 | None:intergenic |
TTCCAATATCACCTCTTCAA+TGG | 0.482736 | 5_2:+5241621 | None:intergenic |
GGCACTAAATAAGGATGAAA+AGG | 0.484886 | 5_2:-5240559 | Msa0751770:CDS |
GTTTGTGCATGGCTGTCGAT+AGG | 0.488637 | 5_2:+5240381 | None:intergenic |
CAAGAATTAAAAGCAGAACT+TGG | 0.489488 | 5_2:+5240019 | None:intergenic |
GAGCAACCATCTATGCTTCA+AGG | 0.490052 | 5_2:-5244448 | Msa0751770:CDS |
GAGGATCGAGCCCATCGCAT+TGG | 0.490072 | 5_2:-5241688 | Msa0751770:CDS |
GTATCTAATTCTTCAGCTAA+AGG | 0.491976 | 5_2:-5240423 | Msa0751770:CDS |
TTGTATTGAAAAGGCCAGCC+TGG | 0.492600 | 5_2:+5241560 | None:intergenic |
TGAGAACGAACTGCCAGATT+GGG | 0.492940 | 5_2:-5240589 | Msa0751770:CDS |
TCATCAGCATCCATGGCAAA+TGG | 0.492970 | 5_2:+5245684 | None:intergenic |
TGGAGCCCTTCTATCTGGTA+TGG | 0.494849 | 5_2:+5244412 | None:intergenic |
CGGTTAATTTCTCTCTCGCT+TGG | 0.498484 | 5_2:+5240705 | None:intergenic |
AGTTCGCAACATGGGCTCCT+AGG | 0.498642 | 5_2:-5244216 | Msa0751770:intron |
CAGTGATTGGAACCCACAAA+TGG | 0.499752 | 5_2:-5241722 | Msa0751770:CDS |
GCTCGAGCTTTATGGACTAA+AGG | 0.500156 | 5_2:-5246283 | Msa0751770:intron |
TTGATAATATACTTTCTGCC+AGG | 0.502014 | 5_2:+5242779 | None:intergenic |
AGAATAGAAGAGCAAGCAAA+AGG | 0.502984 | 5_2:-5245432 | Msa0751770:CDS |
AACCATCCCTACCTCTTTGT+GGG | 0.504206 | 5_2:-5242075 | Msa0751770:CDS |
TTCACAAATGACTCGCCTCA+TGG | 0.507367 | 5_2:-5241941 | Msa0751770:CDS |
TAGAAGGGAACCTCTTTCCT+CGG | 0.510264 | 5_2:+5241852 | None:intergenic |
TCGCCTCATGGACATTCTTG+AGG | 0.511182 | 5_2:-5241929 | Msa0751770:CDS |
AGTGCCGAGTATACCCAATC+TGG | 0.512810 | 5_2:+5240576 | None:intergenic |
AAGGCCAGCCTGGATGACTT+TGG | 0.513659 | 5_2:+5241570 | None:intergenic |
ATGACACCGGGGCAGAAGAA+AGG | 0.513836 | 5_2:-5240353 | Msa0751770:CDS |
GGCAGAGTTGGGTTAGACTA+CGG | 0.514429 | 5_2:-5242741 | Msa0751770:intron |
ACTGGGGCATGATGCGGTTG+CGG | 0.514724 | 5_2:-5245731 | Msa0751770:CDS |
TTGGGAGGAGAAAATTGAGC+AGG | 0.515519 | 5_2:+5243089 | None:intergenic |
AGCACATCTTATGGAATACA+AGG | 0.516140 | 5_2:-5244299 | Msa0751770:CDS |
AGAGACTCCAAACAATCAAA+TGG | 0.519227 | 5_2:-5244771 | Msa0751770:CDS |
TAACAACCTTTCTTCTGCCC+CGG | 0.520256 | 5_2:+5240347 | None:intergenic |
ATCAAGGATACAGGTGTAAG+TGG | 0.521229 | 5_2:-5240216 | Msa0751770:CDS |
CACAAACGAGTGATGACACC+GGG | 0.523416 | 5_2:-5240365 | Msa0751770:CDS |
CAATTCAGTTCAAAATTTCG+AGG | 0.523746 | 5_2:-5243059 | Msa0751770:CDS |
GCAAAGACAACGTGCAACTC+GGG | 0.524817 | 5_2:-5244943 | Msa0751770:CDS |
ATTGTTCAATTTCGAACTAG+AGG | 0.524877 | 5_2:+5246664 | None:intergenic |
TATTGCAGGCATGGCATGGA+AGG | 0.525468 | 5_2:-5244965 | Msa0751770:intron |
ACAATATTGCAGGCATGGCA+TGG | 0.526024 | 5_2:-5244969 | Msa0751770:intron |
GGCAAAGACAACGTGCAACT+CGG | 0.526390 | 5_2:-5244944 | Msa0751770:CDS |
AAATCCAAGGTTCTTTGAAG+AGG | 0.529452 | 5_2:-5245341 | Msa0751770:CDS |
CTTCCAAAACTCCGTAGAGC+TGG | 0.529601 | 5_2:-5241982 | Msa0751770:CDS |
CTGCAGGCTGTTCTGAATTG+GGG | 0.530216 | 5_2:+5243123 | None:intergenic |
TATTTGATCATCAGCATCCA+TGG | 0.530290 | 5_2:+5245677 | None:intergenic |
CCATCGCATTGGGCAAAAGA+AGG | 0.530457 | 5_2:-5241677 | Msa0751770:CDS |
CATTTCTGAAGAAAATCCAT+TGG | 0.530875 | 5_2:-5243949 | Msa0751770:CDS |
AAATACTTGATTGTTGATGA+AGG | 0.531356 | 5_2:-5243926 | Msa0751770:CDS |
CCAGGACAGAAGAGAAATGT+TGG | 0.532850 | 5_2:-5240772 | Msa0751770:CDS |
GAACTACAGATCTCGTCTCA+TGG | 0.533119 | 5_2:-5240613 | Msa0751770:CDS |
CGAGCAAGCACTTCGTCTGT+AGG | 0.535925 | 5_2:+5246301 | None:intergenic |
CCCAATTCAGAACAGCCTGC+AGG | 0.537613 | 5_2:-5243122 | Msa0751770:CDS |
TTCTAAGGAATCACCTCTTG+AGG | 0.538019 | 5_2:-5244706 | Msa0751770:CDS |
AATGGATCTCCAATGCCATA+AGG | 0.538089 | 5_2:+5245702 | None:intergenic |
TAGGTTTGCGTTGGAACTGG+GGG | 0.539278 | 5_2:-5246329 | Msa0751770:CDS |
TTTGTGCATGGCTGTCGATA+GGG | 0.544193 | 5_2:+5240382 | None:intergenic |
TTGCAGCTAGCGGAGTTACA+GGG | 0.545600 | 5_2:-5245828 | Msa0751770:intron |
CAACAATCAAGTATTTCCAA+TGG | 0.545656 | 5_2:+5243933 | None:intergenic |
GCTGTTCTGAATTGGGGTAC+CGG | 0.546084 | 5_2:+5243129 | None:intergenic |
CAAGTTCAAACCAAGACCTC+CGG | 0.546459 | 5_2:+5241774 | None:intergenic |
AAATCCTCATCTTCCTCAAG+AGG | 0.550669 | 5_2:+5244693 | None:intergenic |
CAATAAAGGAAGAAATATCA+GGG | 0.553923 | 5_2:-5244027 | Msa0751770:CDS |
AAGGAAGAAATATCAGGGGA+GGG | 0.554490 | 5_2:-5244022 | Msa0751770:CDS |
AGAACTTGACAATGCAACTC+AGG | 0.555428 | 5_2:-5242107 | Msa0751770:CDS |
CTTGAACCTCTTAGAGGCAG+GGG | 0.555779 | 5_2:+5240269 | None:intergenic |
TCAGGAAGCTTACATGAGAA+TGG | 0.557139 | 5_2:-5244883 | Msa0751770:CDS |
AAAGCATCTGAATCTTCCAA+TGG | 0.558911 | 5_2:+5244741 | None:intergenic |
CACATCAACTCGATCTGCAA+AGG | 0.559095 | 5_2:+5243021 | None:intergenic |
AGAACAGCCTGCAGGAATTG+TGG | 0.560323 | 5_2:-5243114 | Msa0751770:CDS |
CCTCATCTGATCGGGCTGCA+AGG | 0.561044 | 5_2:+5240682 | None:intergenic |
AATTGATGCCAAAGTCATCC+AGG | 0.563723 | 5_2:-5241578 | Msa0751770:CDS |
ACATCAACTCGATCTGCAAA+GGG | 0.565387 | 5_2:+5243022 | None:intergenic |
ACCAGATAGAAGGGCTCCAG+TGG | 0.566203 | 5_2:-5244408 | Msa0751770:CDS |
AAACTATGATATATATCGTA+GGG | 0.566366 | 5_2:-5242052 | Msa0751770:CDS |
GAACGAAGACTTCTGTTGAC+CGG | 0.567326 | 5_2:-5243148 | Msa0751770:CDS |
AGGAAGAAATATCAGGGGAG+GGG | 0.567503 | 5_2:-5244021 | Msa0751770:CDS |
AAGTGATCTACAATGGATGA+AGG | 0.571724 | 5_2:-5240466 | Msa0751770:CDS |
TGTCATCACTCGTTTGTGCA+TGG | 0.572027 | 5_2:+5240370 | None:intergenic |
GAACGTGCTAAACAAAAGAT+GGG | 0.572652 | 5_2:-5241601 | Msa0751770:CDS |
ATAGTTTCCCACAAAGAGGT+AGG | 0.573917 | 5_2:+5242068 | None:intergenic |
TCAAATGTGACATGTCAGCC+TGG | 0.575696 | 5_2:-5242797 | Msa0751770:CDS |
GGACAGAAGAGAAATGTTGG+AGG | 0.577213 | 5_2:-5240769 | Msa0751770:CDS |
TGAAAGCTCGTACTCAAGCT+CGG | 0.578753 | 5_2:-5246637 | Msa0751770:CDS |
GAGTTCCAGTTACAAATCCA+AGG | 0.578754 | 5_2:-5245354 | Msa0751770:CDS |
TAAACAAAGAAAGCATCCAC+TGG | 0.581338 | 5_2:+5244392 | None:intergenic |
GCAGGGACCACAATTCCTGC+AGG | 0.582932 | 5_2:+5243107 | None:intergenic |
GCTTGAACCTCTTAGAGGCA+GGG | 0.583334 | 5_2:+5240268 | None:intergenic |
ATGATGGACGAATGGATGAG+AGG | 0.585677 | 5_2:-5244054 | Msa0751770:CDS |
TAAGACCATACCAGATAGAA+GGG | 0.587419 | 5_2:-5244417 | Msa0751770:CDS |
ATAGGTTTGCGTTGGAACTG+GGG | 0.588261 | 5_2:-5246330 | Msa0751770:intron |
TTCCCACAAAGAGGTAGGGA+TGG | 0.588698 | 5_2:+5242073 | None:intergenic |
ACTCATGATTCTTCAATCGA+TGG | 0.590065 | 5_2:+5243903 | None:intergenic |
CATTGGAGATCCATTTGCCA+TGG | 0.590311 | 5_2:-5245694 | Msa0751770:CDS |
GAAACTATGATATATATCGT+AGG | 0.594875 | 5_2:-5242053 | Msa0751770:CDS |
CTGAATTGAAAATGTTTGGG+AGG | 0.595327 | 5_2:+5243074 | None:intergenic |
TAGTTTCCCACAAAGAGGTA+GGG | 0.596066 | 5_2:+5242069 | None:intergenic |
GGATTTGTAACTGGAACTCA+CGG | 0.597702 | 5_2:+5245358 | None:intergenic |
TCAGATAATGAACCCTGGCT+AGG | 0.598167 | 5_2:+5240138 | None:intergenic |
GATGCCAAAGTCATCCAGGC+TGG | 0.600829 | 5_2:-5241574 | Msa0751770:CDS |
AGATCAAGCTATCCTAGCCA+GGG | 0.602473 | 5_2:-5240150 | Msa0751770:CDS |
TATCATAGTTTCCCACAAAG+AGG | 0.602654 | 5_2:+5242064 | None:intergenic |
ATCACCTCTTGAGGAAGATG+AGG | 0.604453 | 5_2:-5244697 | Msa0751770:CDS |
TTCATCAACCTAAACAAGAA+CGG | 0.605573 | 5_2:+5246763 | None:intergenic |
GGACTCTATGACCAGCTCTA+CGG | 0.607340 | 5_2:+5241971 | None:intergenic |
AATAAGGAAGAAACGGGATG+CGG | 0.610864 | 5_2:-5245658 | Msa0751770:CDS |
GGTCAACGAGTTCGCAACAT+GGG | 0.611233 | 5_2:-5244224 | Msa0751770:CDS |
ATACGTTAAGTGATCTACAA+TGG | 0.612420 | 5_2:-5240473 | Msa0751770:CDS |
TGGATGAAGGCTGTGGAAAG+CGG | 0.612534 | 5_2:-5240453 | Msa0751770:CDS |
GCTAGCGGAGTTACAGGGGA+AGG | 0.614964 | 5_2:-5245823 | Msa0751770:CDS |
GTGATTTACTTGAAGGTCAG+CGG | 0.616779 | 5_2:-5244641 | Msa0751770:CDS |
AAGGAAGAAACGGGATGCGG+AGG | 0.618078 | 5_2:-5245655 | Msa0751770:intron |
CCTTGCAGCCCGATCAGATG+AGG | 0.620104 | 5_2:-5240682 | Msa0751770:CDS |
AAAGGAAGAAATATCAGGGG+AGG | 0.620434 | 5_2:-5244023 | Msa0751770:CDS |
TTGGAGGAGATTATGCGTAG+AGG | 0.621633 | 5_2:-5240753 | Msa0751770:CDS |
TCTACAATGGATGAAGGCTG+TGG | 0.621985 | 5_2:-5240460 | Msa0751770:CDS |
GTTACAGGGGAAGGTTCGAA+TGG | 0.622365 | 5_2:-5245814 | Msa0751770:CDS |
GTGCATGGCTGTCGATAGGG+AGG | 0.623872 | 5_2:+5240385 | None:intergenic |
GCTTGTAAATTTGGGAGCAG+CGG | 0.624800 | 5_2:-5244805 | Msa0751770:CDS |
TGGGAGGAGAAAATTGAGCA+GGG | 0.625401 | 5_2:+5243090 | None:intergenic |
TGCAGCTAGCGGAGTTACAG+GGG | 0.625984 | 5_2:-5245827 | Msa0751770:intron |
ACTGCCAGATTGGGTATACT+CGG | 0.627265 | 5_2:-5240580 | Msa0751770:CDS |
CATCTGATCGGGCTGCAAGG+CGG | 0.628489 | 5_2:+5240685 | None:intergenic |
AGAAACTCACCTGATGCAGA+CGG | 0.630220 | 5_2:+5242963 | None:intergenic |
AGTATGACCTGAGATTTACC+AGG | 0.630949 | 5_2:+5242819 | None:intergenic |
GGGTCAACGAGTTCGCAACA+TGG | 0.634690 | 5_2:-5244225 | Msa0751770:CDS |
CTGGCCATACCTGTTGTCCA+GGG | 0.635351 | 5_2:+5243865 | None:intergenic |
AGGAGATCGTCAGAGCATCA+GGG | 0.641644 | 5_2:-5242029 | Msa0751770:CDS |
AAAGCGGACAAGAAAAGAAG+TGG | 0.641891 | 5_2:-5240505 | Msa0751770:CDS |
GAACTTGGTTCAAATATTTG+GGG | 0.643474 | 5_2:+5240034 | None:intergenic |
GTTCATTATCTGATGCCAGA+GGG | 0.643528 | 5_2:-5240128 | Msa0751770:CDS |
TGTTTGACTGGGGCATGATG+CGG | 0.643991 | 5_2:-5245737 | Msa0751770:CDS |
GACAAGCAATTGTTTGACTG+GGG | 0.650016 | 5_2:-5245747 | Msa0751770:CDS |
ATAAAATTACAACAGCCAGA+AGG | 0.651979 | 5_2:+5239938 | None:intergenic |
ACAAATGGATCAACAAGCTG+AGG | 0.655715 | 5_2:-5241707 | Msa0751770:CDS |
TAGTGTGGGATCCATTGAAG+AGG | 0.656768 | 5_2:-5241632 | Msa0751770:CDS |
TGGCATCAGATAATGAACCC+TGG | 0.658365 | 5_2:+5240133 | None:intergenic |
AGGTTTGCGTTGGAACTGGG+GGG | 0.658941 | 5_2:-5246328 | Msa0751770:CDS |
CTTTGAAGAGGAGAAAACAG+AGG | 0.660756 | 5_2:-5245329 | Msa0751770:CDS |
GGATCTCCAATGCCATAAGG+AGG | 0.669764 | 5_2:+5245705 | None:intergenic |
GCAGTGCTGTTACTGGAAAG+CGG | 0.670287 | 5_2:-5240521 | Msa0751770:CDS |
TGATGAAGGAAATTCTACAC+AGG | 0.674739 | 5_2:-5246747 | Msa0751770:five_prime_UTR |
TAAGGCCCTTCATACTACGA+AGG | 0.675584 | 5_2:-5242869 | Msa0751770:CDS |
GCACAAACGAGTGATGACAC+CGG | 0.682695 | 5_2:-5240366 | Msa0751770:CDS |
GGTTCATTATCTGATGCCAG+AGG | 0.683066 | 5_2:-5240129 | Msa0751770:CDS |
GTTAGAGTTAAGCAACACCA+TGG | 0.686738 | 5_2:-5240328 | Msa0751770:CDS |
GTGTGCTCTAGCAAGAACCC+TGG | 0.689023 | 5_2:-5243882 | Msa0751770:CDS |
AATAAAGGAAGAAATATCAG+GGG | 0.690583 | 5_2:-5244026 | Msa0751770:CDS |
CTATGATATATATCGTAGGG+AGG | 0.690793 | 5_2:-5242049 | Msa0751770:CDS |
TATCAACAAGTGACCGACGT+GGG | 0.703885 | 5_2:-5242762 | Msa0751770:CDS |
GCACATCTTATGGAATACAA+GGG | 0.722893 | 5_2:-5244298 | Msa0751770:CDS |
TTATCAACAAGTGACCGACG+TGG | 0.731964 | 5_2:-5242763 | Msa0751770:CDS |
AAACCTCAAGAATGTCCATG+AGG | 0.733120 | 5_2:+5241926 | None:intergenic |
TAACCCAACTCTGCCCACGT+CGG | 0.749850 | 5_2:+5242749 | None:intergenic |
CAACCATCTATGCTTCAAGG+CGG | 0.753782 | 5_2:-5244445 | Msa0751770:CDS |
ACAAACGAGTGATGACACCG+GGG | 0.833577 | 5_2:-5240364 | Msa0751770:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTGATTATAAATTGAT+TGG | - | chr5_2:5240278-5240297 | Msa0751770:CDS | 10.0% |
!! | ACATTCAAATAATAAAATAT+AGG | + | chr5_2:5245459-5245478 | None:intergenic | 10.0% |
!! | ACTATTTAAACATTAATATA+TGG | - | chr5_2:5245856-5245875 | Msa0751770:intron | 10.0% |
!! | AAAAATAATAGTTTCATCAA+GGG | + | chr5_2:5240739-5240758 | None:intergenic | 15.0% |
!! | TAAAAATAATAGTTTCATCA+AGG | + | chr5_2:5240740-5240759 | None:intergenic | 15.0% |
!! | TTTCATATTATGGATATTAT+TGG | - | chr5_2:5241093-5241112 | Msa0751770:intron | 15.0% |
!!! | CATATTTTGAAAATAAACAA+AGG | + | chr5_2:5241524-5241543 | None:intergenic | 15.0% |
!! | TTGTTTAATAACAACTTAAA+TGG | - | chr5_2:5242293-5242312 | Msa0751770:intron | 15.0% |
!!! | TTTATTATGTTTGTTAGTAT+TGG | - | chr5_2:5242845-5242864 | Msa0751770:CDS | 15.0% |
!! | AAGTAAAATTCTAATAAGAA+AGG | + | chr5_2:5243320-5243339 | None:intergenic | 15.0% |
!!! | TTTCTTATTAGAATTTTACT+TGG | - | chr5_2:5243319-5243338 | Msa0751770:intron | 15.0% |
!!! | GTACTTTTTTATTTGAATAT+TGG | - | chr5_2:5244032-5244051 | Msa0751770:CDS | 15.0% |
!!! | AAAACATTTAGATATTTTCT+GGG | + | chr5_2:5245168-5245187 | None:intergenic | 15.0% |
!!! | GTTGATTATTGTTTTTGAAT+AGG | - | chr5_2:5240321-5240340 | Msa0751770:CDS | 20.0% |
!!! | AAATCCAGTTTTTCATATTA+TGG | - | chr5_2:5241083-5241102 | Msa0751770:intron | 20.0% |
!! | ATATCCATAATATGAAAAAC+TGG | + | chr5_2:5241090-5241109 | None:intergenic | 20.0% |
!! | AGAGTGAAATGAAATTTATT+TGG | - | chr5_2:5241173-5241192 | Msa0751770:intron | 20.0% |
!!! | ACAAAACATGTATGTTTTTA+TGG | - | chr5_2:5241411-5241430 | Msa0751770:intron | 20.0% |
!!! | CAAAACATGTATGTTTTTAT+GGG | - | chr5_2:5241412-5241431 | Msa0751770:intron | 20.0% |
!! | AAATAAACTGCTTGTAAATT+TGG | - | chr5_2:5241855-5241874 | Msa0751770:CDS | 20.0% |
!! | AATAAACTGCTTGTAAATTT+GGG | - | chr5_2:5241856-5241875 | Msa0751770:CDS | 20.0% |
!! | AGTACATTGTAATTGTATAT+AGG | - | chr5_2:5242193-5242212 | Msa0751770:intron | 20.0% |
!!! | TAACAACTTAAATGGAATTT+TGG | - | chr5_2:5242301-5242320 | Msa0751770:intron | 20.0% |
!!! | TTATACTGATGTTTTTGTTT+GGG | - | chr5_2:5242870-5242889 | Msa0751770:CDS | 20.0% |
!! | ATAAATGTCAAATAAATGAC+AGG | + | chr5_2:5242967-5242986 | None:intergenic | 20.0% |
!!! | ATTCAAATAAAAAAGTACTC+AGG | + | chr5_2:5244030-5244049 | None:intergenic | 20.0% |
!! | AAATTAATATCCAACTGAAT+GGG | + | chr5_2:5244205-5244224 | None:intergenic | 20.0% |
!! | TTATTGATATGTTCTATGTT+TGG | - | chr5_2:5244226-5244245 | Msa0751770:CDS | 20.0% |
!! | GTTGTAACATTATGATAATT+TGG | - | chr5_2:5244314-5244333 | Msa0751770:CDS | 20.0% |
!! | AAACTATGATATATATCGTA+GGG | - | chr5_2:5244617-5244636 | Msa0751770:CDS | 20.0% |
!! | TATAAATTTCTTAGACTTGA+TGG | - | chr5_2:5244783-5244802 | Msa0751770:CDS | 20.0% |
!! | CTCAAAAGAAACATAAAATA+TGG | + | chr5_2:5244867-5244886 | None:intergenic | 20.0% |
!!! | GAAAACATTTAGATATTTTC+TGG | + | chr5_2:5245169-5245188 | None:intergenic | 20.0% |
!!! | ATCTAAATGTTTTCAGTTTT+TGG | - | chr5_2:5245175-5245194 | Msa0751770:intron | 20.0% |
!!! | TCTAAATGTTTTCAGTTTTT+GGG | - | chr5_2:5245176-5245195 | Msa0751770:intron | 20.0% |
!! | GACATAAAATTCATGATTAT+GGG | + | chr5_2:5245398-5245417 | None:intergenic | 20.0% |
!!! | CTTTGAAACTACATAATTTG+TGG | - | chr5_2:5240519-5240538 | Msa0751770:CDS | 25.0% |
! | ATGATCAAATAAGGAAGAAA+CGG | - | chr5_2:5241004-5241023 | Msa0751770:intron | 25.0% |
! | AAAGATCGTTTAAGTAACTT+TGG | - | chr5_2:5241650-5241669 | Msa0751770:CDS | 25.0% |
!! | TAAGTAACTTTGGCTTAATA+TGG | - | chr5_2:5241660-5241679 | Msa0751770:CDS | 25.0% |
! | ATTCTCATAAACAATATTGC+AGG | - | chr5_2:5241690-5241709 | Msa0751770:CDS | 25.0% |
! | TTCAATACCATTTGATTGTT+TGG | + | chr5_2:5241908-5241927 | None:intergenic | 25.0% |
! | TTTGAAGAATGGAATTTCTA+AGG | - | chr5_2:5241948-5241967 | Msa0751770:CDS | 25.0% |
!!! | ATTACAGCTGTTTTATATGA+TGG | - | chr5_2:5242599-5242618 | Msa0751770:intron | 25.0% |
! | CAATAAAGGAAGAAATATCA+GGG | - | chr5_2:5242642-5242661 | Msa0751770:intron | 25.0% |
! | AATAAAGGAAGAAATATCAG+GGG | - | chr5_2:5242643-5242662 | Msa0751770:intron | 25.0% |
!! | AAATACTTGATTGTTGATGA+AGG | - | chr5_2:5242743-5242762 | Msa0751770:CDS | 25.0% |
!!! | GTTATACTGATGTTTTTGTT+TGG | - | chr5_2:5242869-5242888 | Msa0751770:CDS | 25.0% |
!!! | TTTTTGTTTGGGTATATTGA+AGG | - | chr5_2:5242881-5242900 | Msa0751770:intron | 25.0% |
! | TAATGGAGAGTGATAAAAAT+CGG | - | chr5_2:5242912-5242931 | Msa0751770:intron | 25.0% |
! | GTATATCATGTACTAAAGTT+TGG | - | chr5_2:5243125-5243144 | Msa0751770:CDS | 25.0% |
!!! | ATGGTCTCATAATTAGTTTT+GGG | + | chr5_2:5243220-5243239 | None:intergenic | 25.0% |
! | ATTTATCTAAAAACATACGC+AGG | + | chr5_2:5243265-5243284 | None:intergenic | 25.0% |
!!! | GCGTATGTTTTTAGATAAAT+TGG | - | chr5_2:5243265-5243284 | Msa0751770:intron | 25.0% |
!!! | TTTTACTTGGAAGCATTTTT+TGG | - | chr5_2:5243332-5243351 | Msa0751770:intron | 25.0% |
!!! | TTTACTTGGAAGCATTTTTT+GGG | - | chr5_2:5243333-5243352 | Msa0751770:intron | 25.0% |
! | AATTCAACAATAGATATTGC+TGG | + | chr5_2:5243390-5243409 | None:intergenic | 25.0% |
! | TAGCTGCAAAATAATTGAAT+TGG | + | chr5_2:5243494-5243513 | None:intergenic | 25.0% |
! | GAACTGAATTGAAAATGTTT+GGG | + | chr5_2:5243601-5243620 | None:intergenic | 25.0% |
! | TGAACTGAATTGAAAATGTT+TGG | + | chr5_2:5243602-5243621 | None:intergenic | 25.0% |
! | TAATTGTTCTTCATCTGTTA+AGG | + | chr5_2:5243675-5243694 | None:intergenic | 25.0% |
!! | TTAAGAGAAGAGTATGTAAA+GGG | + | chr5_2:5243979-5243998 | None:intergenic | 25.0% |
!! | TTTAAGAGAAGAGTATGTAA+AGG | + | chr5_2:5243980-5243999 | None:intergenic | 25.0% |
!!! | TTGATTTGCTTTCTAAAGAT+GGG | + | chr5_2:5244170-5244189 | None:intergenic | 25.0% |
!!! | TTTGATTTGCTTTCTAAAGA+TGG | + | chr5_2:5244171-5244190 | None:intergenic | 25.0% |
! | CAAATTAATATCCAACTGAA+TGG | + | chr5_2:5244206-5244225 | None:intergenic | 25.0% |
! | TGTTACAACTAGTAAAATGT+TGG | + | chr5_2:5244303-5244322 | None:intergenic | 25.0% |
! | CTAAATAGAGAAAAATCTGT+AGG | - | chr5_2:5244516-5244535 | Msa0751770:intron | 25.0% |
! | GAAACTATGATATATATCGT+AGG | - | chr5_2:5244616-5244635 | Msa0751770:CDS | 25.0% |
!! | AGCATTGAATTTCTTTAGAA+GGG | + | chr5_2:5244835-5244854 | None:intergenic | 25.0% |
! | TTATAATCTTTGACAGTGAT+TGG | - | chr5_2:5244934-5244953 | Msa0751770:CDS | 25.0% |
! | TGTTTCTTTGCATGTTAAAA+AGG | - | chr5_2:5245212-5245231 | Msa0751770:intron | 25.0% |
! | TGTTTGACAAAGTTTATACA+TGG | + | chr5_2:5245306-5245325 | None:intergenic | 25.0% |
! | GGACATAAAATTCATGATTA+TGG | + | chr5_2:5245399-5245418 | None:intergenic | 25.0% |
!!! | GTTAATTTTTAGCAAGATCT+AGG | + | chr5_2:5245838-5245857 | None:intergenic | 25.0% |
!! | TCAAATGAAGATACCTTTTA+TGG | - | chr5_2:5246375-5246394 | Msa0751770:intron | 25.0% |
!! | CAAATGAAGATACCTTTTAT+GGG | - | chr5_2:5246376-5246395 | Msa0751770:intron | 25.0% |
! | ATCCTTGATTTCATGTTTAT+GGG | + | chr5_2:5246442-5246461 | None:intergenic | 25.0% |
! | TATCCTTGATTTCATGTTTA+TGG | + | chr5_2:5246443-5246462 | None:intergenic | 25.0% |
! | AAATATTTGGGGAAAATTTC+TGG | + | chr5_2:5246627-5246646 | None:intergenic | 25.0% |
! | AGAACTTGGTTCAAATATTT+GGG | + | chr5_2:5246639-5246658 | None:intergenic | 25.0% |
!! | TTTTGTTTCCGTTCTTGTTT+AGG | - | chr5_2:5239898-5239917 | Msa0751770:three_prime_UTR | 30.0% |
TTCATCAACCTAAACAAGAA+CGG | + | chr5_2:5239909-5239928 | None:intergenic | 30.0% | |
ATTGTTCAATTTCGAACTAG+AGG | + | chr5_2:5240008-5240027 | None:intergenic | 30.0% | |
!! | TTGTTCATTGTTTTGTGTCT+TGG | - | chr5_2:5240429-5240448 | Msa0751770:CDS | 30.0% |
!! | TGTTCATTGTTTTGTGTCTT+GGG | - | chr5_2:5240430-5240449 | Msa0751770:CDS | 30.0% |
! | TGCTAAGTATGTGTTTGTTT+TGG | - | chr5_2:5240468-5240487 | Msa0751770:CDS | 30.0% |
!!! | TAAGTATGTGTTTGTTTTGG+CGG | - | chr5_2:5240471-5240490 | Msa0751770:CDS | 30.0% |
CGATATACGAAAAGCAATAA+AGG | + | chr5_2:5240703-5240722 | None:intergenic | 30.0% | |
!!! | GTTTTAATTGACATGCAAAC+AGG | + | chr5_2:5240775-5240794 | None:intergenic | 30.0% |
! | ACACGTTTCTTGTCATTTAT+CGG | + | chr5_2:5240797-5240816 | None:intergenic | 30.0% |
TGATCAAATAAGGAAGAAAC+GGG | - | chr5_2:5241005-5241024 | Msa0751770:intron | 30.0% | |
AAACTGGATTTAAACCAAGT+GGG | + | chr5_2:5241074-5241093 | None:intergenic | 30.0% | |
AAAACTGGATTTAAACCAAG+TGG | + | chr5_2:5241075-5241094 | None:intergenic | 30.0% | |
!! | GTTTGCATATATTGATGATG+AGG | - | chr5_2:5241121-5241140 | Msa0751770:intron | 30.0% |
TTTCACTCTCATTTATTCCT+TGG | + | chr5_2:5241162-5241181 | None:intergenic | 30.0% | |
AGCAAAAAATCTTCTTGTTC+TGG | + | chr5_2:5241274-5241293 | None:intergenic | 30.0% | |
TTGTAACAAATGAAAGACAG+CGG | + | chr5_2:5241395-5241414 | None:intergenic | 30.0% | |
! | ACAGATGGTATACAACTTTT+TGG | - | chr5_2:5241447-5241466 | Msa0751770:intron | 30.0% |
TTCTTGCATATCCAGTATTA+TGG | + | chr5_2:5241496-5241515 | None:intergenic | 30.0% | |
! | TCAGATTTTCCCATCTTTTT+GGG | - | chr5_2:5241624-5241643 | Msa0751770:CDS | 30.0% |
! | ATCTTTTGACCCAAAAAGAT+GGG | + | chr5_2:5241636-5241655 | None:intergenic | 30.0% |
! | ATCAAATGGTATTGAACCAT+TGG | - | chr5_2:5241912-5241931 | Msa0751770:CDS | 30.0% |
! | CTTTTCTTGAATGGAATGTA+TGG | + | chr5_2:5242067-5242086 | None:intergenic | 30.0% |
CATACATTCCATTCAAGAAA+AGG | - | chr5_2:5242065-5242084 | Msa0751770:CDS | 30.0% | |
!!! | TGTTTTATATGATGGACGAA+TGG | - | chr5_2:5242607-5242626 | Msa0751770:intron | 30.0% |
GCAATAAAGGAAGAAATATC+AGG | - | chr5_2:5242641-5242660 | Msa0751770:intron | 30.0% | |
! | CATTTCTGAAGAAAATCCAT+TGG | - | chr5_2:5242720-5242739 | Msa0751770:intron | 30.0% |
CAACAATCAAGTATTTCCAA+TGG | + | chr5_2:5242739-5242758 | None:intergenic | 30.0% | |
TATTGAAGGAGGAAAGATAA+TGG | - | chr5_2:5242895-5242914 | Msa0751770:intron | 30.0% | |
AATGGAGAGTGATAAAAATC+GGG | - | chr5_2:5242913-5242932 | Msa0751770:intron | 30.0% | |
AATGTCAAATAAATGACAGG+AGG | + | chr5_2:5242964-5242983 | None:intergenic | 30.0% | |
ATGATATACACTGTATTGTG+GGG | + | chr5_2:5243114-5243133 | None:intergenic | 30.0% | |
CATGATATACACTGTATTGT+GGG | + | chr5_2:5243115-5243134 | None:intergenic | 30.0% | |
ACATGATATACACTGTATTG+TGG | + | chr5_2:5243116-5243135 | None:intergenic | 30.0% | |
CTTTAACAGAGATGAGTTTA+GGG | + | chr5_2:5243158-5243177 | None:intergenic | 30.0% | |
CTAAACTCATCTCTGTTAAA+GGG | - | chr5_2:5243157-5243176 | Msa0751770:CDS | 30.0% | |
TAAACTCATCTCTGTTAAAG+GGG | - | chr5_2:5243158-5243177 | Msa0751770:CDS | 30.0% | |
!!! | TGGTCTCATAATTAGTTTTG+GGG | + | chr5_2:5243219-5243238 | None:intergenic | 30.0% |
!! | CATGGTCTCATAATTAGTTT+TGG | + | chr5_2:5243221-5243240 | None:intergenic | 30.0% |
CAAAACTAATTATGAGACCA+TGG | - | chr5_2:5243219-5243238 | Msa0751770:intron | 30.0% | |
CAATTCAGTTCAAAATTTCG+AGG | - | chr5_2:5243610-5243629 | Msa0751770:intron | 30.0% | |
! | AATAAACCATTCCCTCTTTT+AGG | - | chr5_2:5243774-5243793 | Msa0751770:intron | 30.0% |
TTATTACCTAAAAGAGGGAA+TGG | + | chr5_2:5243783-5243802 | None:intergenic | 30.0% | |
!! | ATTCCCTCTTTTAGGTAATA+AGG | - | chr5_2:5243782-5243801 | Msa0751770:intron | 30.0% |
! | TTTTTCCTTCGTAGTATGAA+GGG | + | chr5_2:5243808-5243827 | None:intergenic | 30.0% |
!!! | TCTTTTTTTTCCCATTCAGT+TGG | - | chr5_2:5244192-5244211 | Msa0751770:intron | 30.0% |
!!! | GTAAAGCGAGAATTTTTTTC+CGG | - | chr5_2:5244271-5244290 | Msa0751770:CDS | 30.0% |
AGTAAAATGTTGGAAAACAC+CGG | + | chr5_2:5244293-5244312 | None:intergenic | 30.0% | |
!!! | TCCAAAGAACTAGTTTTCAT+TGG | - | chr5_2:5244394-5244413 | Msa0751770:CDS | 30.0% |
! | ACCAATGAAAACTAGTTCTT+TGG | + | chr5_2:5244398-5244417 | None:intergenic | 30.0% |
ATAAACCAACATTACAGAGA+CGG | + | chr5_2:5244442-5244461 | None:intergenic | 30.0% | |
AGAAATCAGGTAAGCATATA+AGG | + | chr5_2:5244469-5244488 | None:intergenic | 30.0% | |
!! | GAGCATTGAATTTCTTTAGA+AGG | + | chr5_2:5244836-5244855 | None:intergenic | 30.0% |
AACATAAAATATGGTGAGTC+AGG | + | chr5_2:5244858-5244877 | None:intergenic | 30.0% | |
! | AGTTTTTGTGTTAGTTAGTG+TGG | - | chr5_2:5245022-5245041 | Msa0751770:intron | 30.0% |
! | GTTTTTGTGTTAGTTAGTGT+GGG | - | chr5_2:5245023-5245042 | Msa0751770:intron | 30.0% |
!! | AAATGTTTTCAGTTTTTGGG+TGG | - | chr5_2:5245179-5245198 | Msa0751770:intron | 30.0% |
AAAAGGCCTGAAATTACATT+GGG | + | chr5_2:5245360-5245379 | None:intergenic | 30.0% | |
TATGTCCATAAAAACAAGCT+GGG | + | chr5_2:5245434-5245453 | None:intergenic | 30.0% | |
TTATGTCCATAAAAACAAGC+TGG | + | chr5_2:5245435-5245454 | None:intergenic | 30.0% | |
AAAACAATATTGACGTGCAT+CGG | + | chr5_2:5245487-5245506 | None:intergenic | 30.0% | |
TAATCAAAGTTTGAGAATCC+TGG | - | chr5_2:5245539-5245558 | Msa0751770:intron | 30.0% | |
CATTTGAGAAACTTTATCGT+TGG | - | chr5_2:5245653-5245672 | Msa0751770:intron | 30.0% | |
ATACGTTAAGTGATCTACAA+TGG | - | chr5_2:5246196-5246215 | Msa0751770:intron | 30.0% | |
GTATCTAATTCTTCAGCTAA+AGG | - | chr5_2:5246246-5246265 | Msa0751770:intron | 30.0% | |
ATTTGATCTTTCATTTGCCA+TGG | + | chr5_2:5246361-5246380 | None:intergenic | 30.0% | |
TTCCCATAAACATGAAATCA+AGG | - | chr5_2:5246437-5246456 | Msa0751770:intron | 30.0% | |
AAACATGAAATCAAGGATAC+AGG | - | chr5_2:5246444-5246463 | Msa0751770:intron | 30.0% | |
GAACTTGGTTCAAATATTTG+GGG | + | chr5_2:5246638-5246657 | None:intergenic | 30.0% | |
CAGAACTTGGTTCAAATATT+TGG | + | chr5_2:5246640-5246659 | None:intergenic | 30.0% | |
CAAGAATTAAAAGCAGAACT+TGG | + | chr5_2:5246653-5246672 | None:intergenic | 30.0% | |
ATAAAATTACAACAGCCAGA+AGG | + | chr5_2:5246734-5246753 | None:intergenic | 30.0% | |
!! | GTTCTTGTTTAGGTTGATGA+AGG | - | chr5_2:5239908-5239927 | Msa0751770:three_prime_UTR | 35.0% |
TGATGAAGGAAATTCTACAC+AGG | - | chr5_2:5239922-5239941 | Msa0751770:three_prime_UTR | 35.0% | |
AATCGATTAACTCAGCTTGA+AGG | - | chr5_2:5240061-5240080 | Msa0751770:three_prime_UTR | 35.0% | |
AATGCAAAACACACAACAGA+AGG | + | chr5_2:5240116-5240135 | None:intergenic | 35.0% | |
! | GTTTTTGAATAGGTTTGCGT+TGG | - | chr5_2:5240331-5240350 | Msa0751770:CDS | 35.0% |
TGCTAAACATGTGGCTAAAT+TGG | - | chr5_2:5240603-5240622 | Msa0751770:CDS | 35.0% | |
!!! | ACTTTTTTTCTTGCAGCTAG+CGG | - | chr5_2:5240831-5240850 | Msa0751770:intron | 35.0% |
TATTTGATCATCAGCATCCA+TGG | + | chr5_2:5240995-5241014 | None:intergenic | 35.0% | |
TGGATGCTGATGATCAAATA+AGG | - | chr5_2:5240995-5241014 | Msa0751770:intron | 35.0% | |
AACTGGATTTAAACCAAGTG+GGG | + | chr5_2:5241073-5241092 | None:intergenic | 35.0% | |
TATTCCTTGGATCAATGAAG+CGG | + | chr5_2:5241149-5241168 | None:intergenic | 35.0% | |
AGAATAGAAGAGCAAGCAAA+AGG | - | chr5_2:5241237-5241256 | Msa0751770:intron | 35.0% | |
AAGAACCTTGGATTTGTAAC+TGG | + | chr5_2:5241323-5241342 | None:intergenic | 35.0% | |
! | AAATCCAAGGTTCTTTGAAG+AGG | - | chr5_2:5241328-5241347 | Msa0751770:intron | 35.0% |
GGGAAACTAAAATGTACAGA+TGG | - | chr5_2:5241432-5241451 | Msa0751770:intron | 35.0% | |
AAAGCACATGCACTTGTAAT+AGG | + | chr5_2:5241473-5241492 | None:intergenic | 35.0% | |
! | GTCAGATTTTCCCATCTTTT+TGG | - | chr5_2:5241623-5241642 | Msa0751770:CDS | 35.0% |
! | GATCTTTTGACCCAAAAAGA+TGG | + | chr5_2:5241637-5241656 | None:intergenic | 35.0% |
CATAAACAATATTGCAGGCA+TGG | - | chr5_2:5241695-5241714 | Msa0751770:CDS | 35.0% | |
!!! | GATCATCAGCTTTTAAAGCT+TGG | + | chr5_2:5241768-5241787 | None:intergenic | 35.0% |
!! | AGCTTTAAAAGCTGATGATC+AGG | - | chr5_2:5241768-5241787 | Msa0751770:CDS | 35.0% |
AGAGACTCCAAACAATCAAA+TGG | - | chr5_2:5241898-5241917 | Msa0751770:CDS | 35.0% | |
! | AAAGCATCTGAATCTTCCAA+TGG | + | chr5_2:5241931-5241950 | None:intergenic | 35.0% |
!! | GATTCAGATGCTTTGAAGAA+TGG | - | chr5_2:5241937-5241956 | Msa0751770:CDS | 35.0% |
GACAGTAGTGATTTACTTGA+AGG | - | chr5_2:5242021-5242040 | Msa0751770:CDS | 35.0% | |
CATTCCATTCAAGAAAAGGT+TGG | - | chr5_2:5242069-5242088 | Msa0751770:CDS | 35.0% | |
! | GATACCAACCTTTTCTTGAA+TGG | + | chr5_2:5242076-5242095 | None:intergenic | 35.0% |
ATTGGAAGTCTAACTAGCAT+AGG | - | chr5_2:5242134-5242153 | Msa0751770:CDS | 35.0% | |
TTGGAAGTCTAACTAGCATA+GGG | - | chr5_2:5242135-5242154 | Msa0751770:intron | 35.0% | |
TCTAACTAGCATAGGGTTTA+GGG | - | chr5_2:5242142-5242161 | Msa0751770:intron | 35.0% | |
TTAAGACCATACCAGATAGA+AGG | - | chr5_2:5242251-5242270 | Msa0751770:intron | 35.0% | |
TAAGACCATACCAGATAGAA+GGG | - | chr5_2:5242252-5242271 | Msa0751770:intron | 35.0% | |
!! | TAAACAAAGAAAGCATCCAC+TGG | + | chr5_2:5242280-5242299 | None:intergenic | 35.0% |
!!! | TGGAATTTTGGCTGATGAAA+TGG | - | chr5_2:5242313-5242332 | Msa0751770:intron | 35.0% |
!!! | GGAATTTTGGCTGATGAAAT+GGG | - | chr5_2:5242314-5242333 | Msa0751770:intron | 35.0% |
!!! | GAATTTTGGCTGATGAAATG+GGG | - | chr5_2:5242315-5242334 | Msa0751770:intron | 35.0% |
AAGATGTGCTATCAACGAAA+TGG | + | chr5_2:5242360-5242379 | None:intergenic | 35.0% | |
!! | TTCGTTGATAGCACATCTTA+TGG | - | chr5_2:5242361-5242380 | Msa0751770:intron | 35.0% |
AGCACATCTTATGGAATACA+AGG | - | chr5_2:5242370-5242389 | Msa0751770:intron | 35.0% | |
GCACATCTTATGGAATACAA+GGG | - | chr5_2:5242371-5242390 | Msa0751770:intron | 35.0% | |
TTGGAGCCACAATCAAAAAA+GGG | + | chr5_2:5242406-5242425 | None:intergenic | 35.0% | |
! | TTTGGAGCCACAATCAAAAA+AGG | + | chr5_2:5242407-5242426 | None:intergenic | 35.0% |
!!! | TTTTTTGATTGTGGCTCCAA+AGG | - | chr5_2:5242406-5242425 | Msa0751770:intron | 35.0% |
TATCTAACTTCGACATACCT+AGG | + | chr5_2:5242473-5242492 | None:intergenic | 35.0% | |
ACTCATGATTCTTCAATCGA+TGG | + | chr5_2:5242769-5242788 | None:intergenic | 35.0% | |
TATGGCCAGTATTAGTGTTA+TGG | - | chr5_2:5242818-5242837 | Msa0751770:CDS | 35.0% | |
ATGGCCAGTATTAGTGTTAT+GGG | - | chr5_2:5242819-5242838 | Msa0751770:CDS | 35.0% | |
TTGTTTGGGTATATTGAAGG+AGG | - | chr5_2:5242884-5242903 | Msa0751770:intron | 35.0% | |
ATGGAGAGTGATAAAAATCG+GGG | - | chr5_2:5242914-5242933 | Msa0751770:intron | 35.0% | |
ACAGGAGGAAAGAAAAAATC+CGG | + | chr5_2:5242949-5242968 | None:intergenic | 35.0% | |
TGATTGTGAAACAGAGAAGA+TGG | + | chr5_2:5242998-5243017 | None:intergenic | 35.0% | |
CCTTTAACAGAGATGAGTTT+AGG | + | chr5_2:5243159-5243178 | None:intergenic | 35.0% | |
CCTAAACTCATCTCTGTTAA+AGG | - | chr5_2:5243156-5243175 | Msa0751770:CDS | 35.0% | |
!!! | CTCATAATTAGTTTTGGGGT+TGG | + | chr5_2:5243215-5243234 | None:intergenic | 35.0% |
ATTATGAGACCATGGCATAT+AGG | - | chr5_2:5243227-5243246 | Msa0751770:intron | 35.0% | |
!! | TGGATGTAAACAGCTTTAGA+AGG | + | chr5_2:5243370-5243389 | None:intergenic | 35.0% |
CTGAATTGAAAATGTTTGGG+AGG | + | chr5_2:5243598-5243617 | None:intergenic | 35.0% | |
! | CTTTTTCCTTCGTAGTATGA+AGG | + | chr5_2:5243809-5243828 | None:intergenic | 35.0% |
CTTCATACTACGAAGGAAAA+AGG | - | chr5_2:5243807-5243826 | Msa0751770:intron | 35.0% | |
TATGTAAAGGGATAACTGGA+AGG | + | chr5_2:5243967-5243986 | None:intergenic | 35.0% | |
AGAGTATGTAAAGGGATAAC+TGG | + | chr5_2:5243971-5243990 | None:intergenic | 35.0% | |
GGGAATAAACAAATAACCCT+TGG | + | chr5_2:5244068-5244087 | None:intergenic | 35.0% | |
AAAACCAAATAGAATGGGGT+TGG | + | chr5_2:5244093-5244112 | None:intergenic | 35.0% | |
!! | AACCCCATTCTATTTGGTTT+TGG | - | chr5_2:5244092-5244111 | Msa0751770:intron | 35.0% |
AGCCAAAACCAAATAGAATG+GGG | + | chr5_2:5244097-5244116 | None:intergenic | 35.0% | |
GAGCCAAAACCAAATAGAAT+GGG | + | chr5_2:5244098-5244117 | None:intergenic | 35.0% | |
AGAGCCAAAACCAAATAGAA+TGG | + | chr5_2:5244099-5244118 | None:intergenic | 35.0% | |
ATTACAGAGACGGATAGTTT+GGG | + | chr5_2:5244432-5244451 | None:intergenic | 35.0% | |
ACCTGATTTCTTGAGAACTT+CGG | - | chr5_2:5244478-5244497 | Msa0751770:intron | 35.0% | |
AGAGAAAAATCTGTAGGTTC+TGG | - | chr5_2:5244522-5244541 | Msa0751770:intron | 35.0% | |
TATCATAGTTTCCCACAAAG+AGG | + | chr5_2:5244608-5244627 | None:intergenic | 35.0% | |
CTATGATATATATCGTAGGG+AGG | - | chr5_2:5244620-5244639 | Msa0751770:CDS | 35.0% | |
GAGTCATTTGTGAAAAAAGG+AGG | + | chr5_2:5244722-5244741 | None:intergenic | 35.0% | |
ATCCATTGAAGAGGTGATAT+TGG | - | chr5_2:5245046-5245065 | Msa0751770:intron | 35.0% | |
TTCCAATATCACCTCTTCAA+TGG | + | chr5_2:5245051-5245070 | None:intergenic | 35.0% | |
GAACGTGCTAAACAAAAGAT+GGG | - | chr5_2:5245068-5245087 | Msa0751770:intron | 35.0% | |
CTGTTGACGTTGTATTGAAA+AGG | + | chr5_2:5245121-5245140 | None:intergenic | 35.0% | |
! | CTTTTCAATACAACGTCAAC+AGG | - | chr5_2:5245119-5245138 | Msa0751770:intron | 35.0% |
TCATGACCCAATGTAATTTC+AGG | - | chr5_2:5245351-5245370 | Msa0751770:CDS | 35.0% | |
CAAAAGGCCTGAAATTACAT+TGG | + | chr5_2:5245361-5245380 | None:intergenic | 35.0% | |
CATCTGAAAGAGTTTGAGAA+GGG | + | chr5_2:5245565-5245584 | None:intergenic | 35.0% | |
ACATCTGAAAGAGTTTGAGA+AGG | + | chr5_2:5245566-5245585 | None:intergenic | 35.0% | |
CTTGACGAGACATTCTTTAT+TGG | - | chr5_2:5245599-5245618 | Msa0751770:intron | 35.0% | |
GGGATGTTCGAATAATTAGT+TGG | - | chr5_2:5245688-5245707 | Msa0751770:CDS | 35.0% | |
CTAATGCTCAAAATCAGGTA+GGG | + | chr5_2:5245751-5245770 | None:intergenic | 35.0% | |
CTTTGCTAATGCTCAAAATC+AGG | + | chr5_2:5245756-5245775 | None:intergenic | 35.0% | |
CGAAACACGTAAGATTGAAA+TGG | + | chr5_2:5245812-5245831 | None:intergenic | 35.0% | |
AGAGAATGGATGAAGATAGA+AGG | - | chr5_2:5246025-5246044 | Msa0751770:intron | 35.0% | |
GGCACTAAATAAGGATGAAA+AGG | - | chr5_2:5246110-5246129 | Msa0751770:intron | 35.0% | |
AAGTGATCTACAATGGATGA+AGG | - | chr5_2:5246203-5246222 | Msa0751770:intron | 35.0% | |
TTCGAACTAGAGGAGCAATT+AGG | + | chr5_2:5239998-5240017 | None:intergenic | 40.0% | |
AATAGGTTTGCGTTGGAACT+GGG | - | chr5_2:5240338-5240357 | Msa0751770:CDS | 40.0% | |
!! | ATTGTTTTGTGTCTTGGGAG+TGG | - | chr5_2:5240435-5240454 | Msa0751770:CDS | 40.0% |
!!! | TATGTGTTTGTTTTGGCGGT+GGG | - | chr5_2:5240475-5240494 | Msa0751770:CDS | 40.0% |
CAAATGGTCTGCTAAACATG+TGG | - | chr5_2:5240594-5240613 | Msa0751770:CDS | 40.0% | |
AAAAAAAGTCCTTGCCGACA+AGG | + | chr5_2:5240820-5240839 | None:intergenic | 40.0% | |
!! | TGGAAGTGAGCTCTGAATAT+TGG | - | chr5_2:5240875-5240894 | Msa0751770:intron | 40.0% |
CAGTCAAACAATTGCTTGTC+GGG | + | chr5_2:5240922-5240941 | None:intergenic | 40.0% | |
CCAGTCAAACAATTGCTTGT+CGG | + | chr5_2:5240923-5240942 | None:intergenic | 40.0% | |
CGACAAGCAATTGTTTGACT+GGG | - | chr5_2:5240921-5240940 | Msa0751770:intron | 40.0% | |
GACAAGCAATTGTTTGACTG+GGG | - | chr5_2:5240922-5240941 | Msa0751770:intron | 40.0% | |
AATGGATCTCCAATGCCATA+AGG | + | chr5_2:5240970-5240989 | None:intergenic | 40.0% | |
AATAAGGAAGAAACGGGATG+CGG | - | chr5_2:5241011-5241030 | Msa0751770:intron | 40.0% | |
ACTGGATTTAAACCAAGTGG+GGG | + | chr5_2:5241072-5241091 | None:intergenic | 40.0% | |
GGATTTGTAACTGGAACTCA+CGG | + | chr5_2:5241314-5241333 | None:intergenic | 40.0% | |
GAGTTCCAGTTACAAATCCA+AGG | - | chr5_2:5241315-5241334 | Msa0751770:intron | 40.0% | |
TTCTCCTCTTCAAAGAACCT+TGG | + | chr5_2:5241335-5241354 | None:intergenic | 40.0% | |
! | CTTTGAAGAGGAGAAAACAG+AGG | - | chr5_2:5241340-5241359 | Msa0751770:intron | 40.0% |
AAAGACAGCGGAAGAAATAG+CGG | + | chr5_2:5241383-5241402 | None:intergenic | 40.0% | |
GCATGTGCTTTCCATAATAC+TGG | - | chr5_2:5241482-5241501 | Msa0751770:intron | 40.0% | |
TTGTTACTGTCTGTCTCTCT+TGG | - | chr5_2:5241568-5241587 | Msa0751770:CDS | 40.0% | |
TGTTACTGTCTGTCTCTCTT+GGG | - | chr5_2:5241569-5241588 | Msa0751770:CDS | 40.0% | |
TCAGGAAGCTTACATGAGAA+TGG | - | chr5_2:5241786-5241805 | Msa0751770:CDS | 40.0% | |
! | TTCTAAGGAATCACCTCTTG+AGG | - | chr5_2:5241963-5241982 | Msa0751770:CDS | 40.0% |
AAATCCTCATCTTCCTCAAG+AGG | + | chr5_2:5241979-5241998 | None:intergenic | 40.0% | |
TGAGGAAGATGAGGATTTGA+TGG | - | chr5_2:5241981-5242000 | Msa0751770:CDS | 40.0% | |
GTGATTTACTTGAAGGTCAG+CGG | - | chr5_2:5242028-5242047 | Msa0751770:CDS | 40.0% | |
GTCTAACTAGCATAGGGTTT+AGG | - | chr5_2:5242141-5242160 | Msa0751770:intron | 40.0% | |
AAAGGCTGTTCTGCCAAATT+GGG | - | chr5_2:5242424-5242443 | Msa0751770:intron | 40.0% | |
TCCTAACATGTTCTCCTGTT+TGG | - | chr5_2:5242506-5242525 | Msa0751770:intron | 40.0% | |
CCTAACATGTTCTCCTGTTT+GGG | - | chr5_2:5242507-5242526 | Msa0751770:intron | 40.0% | |
GGATGAGAGGAAAGCAATAA+AGG | - | chr5_2:5242628-5242647 | Msa0751770:intron | 40.0% | |
AAAGGAAGAAATATCAGGGG+AGG | - | chr5_2:5242646-5242665 | Msa0751770:intron | 40.0% | |
AAGGAAGAAATATCAGGGGA+GGG | - | chr5_2:5242647-5242666 | Msa0751770:intron | 40.0% | |
TGGCCAGTATTAGTGTTATG+GGG | - | chr5_2:5242820-5242839 | Msa0751770:CDS | 40.0% | |
AGTCCCCATAACACTAATAC+TGG | + | chr5_2:5242826-5242845 | None:intergenic | 40.0% | |
AGAGTGATAAAAATCGGGGT+GGG | - | chr5_2:5242918-5242937 | Msa0751770:intron | 40.0% | |
CAGGAGGAAAGAAAAAATCC+GGG | + | chr5_2:5242948-5242967 | None:intergenic | 40.0% | |
TGTGAAACAGAGAAGATGGA+GGG | + | chr5_2:5242994-5243013 | None:intergenic | 40.0% | |
TTGTGAAACAGAGAAGATGG+AGG | + | chr5_2:5242995-5243014 | None:intergenic | 40.0% | |
!! | TAAAGGGGCATGTGTTGTTT+AGG | - | chr5_2:5243173-5243192 | Msa0751770:intron | 40.0% |
!!! | ATTAGTTTTGGGGTTGGTTG+AGG | + | chr5_2:5243209-5243228 | None:intergenic | 40.0% |
AATAACCGTCCTATATGCCA+TGG | + | chr5_2:5243239-5243258 | None:intergenic | 40.0% | |
CAGTTCAAAATTTCGAGGAC+TGG | - | chr5_2:5243615-5243634 | Msa0751770:intron | 40.0% | |
ACATCAACTCGATCTGCAAA+GGG | + | chr5_2:5243650-5243669 | None:intergenic | 40.0% | |
!! | GGGCCTTATTACCTAAAAGA+GGG | + | chr5_2:5243788-5243807 | None:intergenic | 40.0% |
!! | AGGGCCTTATTACCTAAAAG+AGG | + | chr5_2:5243789-5243808 | None:intergenic | 40.0% |
GAGGTAGAAAAGTTTCTTCC+TGG | - | chr5_2:5243832-5243851 | Msa0751770:intron | 40.0% | |
GTTTCTTCCTGGTAAATCTC+AGG | - | chr5_2:5243843-5243862 | Msa0751770:intron | 40.0% | |
AGTATGACCTGAGATTTACC+AGG | + | chr5_2:5243853-5243872 | None:intergenic | 40.0% | |
CAAATAGAATGGGGTTGGAT+GGG | + | chr5_2:5244088-5244107 | None:intergenic | 40.0% | |
CATTACAGAGACGGATAGTT+TGG | + | chr5_2:5244433-5244452 | None:intergenic | 40.0% | |
ACTATCCGTCTCTGTAATGT+TGG | - | chr5_2:5244434-5244453 | Msa0751770:CDS | 40.0% | |
ACCGAAGTTCTCAAGAAATC+AGG | + | chr5_2:5244482-5244501 | None:intergenic | 40.0% | |
AGAACTTGACAATGCAACTC+AGG | - | chr5_2:5244562-5244581 | Msa0751770:intron | 40.0% | |
TAGTTTCCCACAAAGAGGTA+GGG | + | chr5_2:5244603-5244622 | None:intergenic | 40.0% | |
ATAGTTTCCCACAAAGAGGT+AGG | + | chr5_2:5244604-5244623 | None:intergenic | 40.0% | |
GGCGAGTCATTTGTGAAAAA+AGG | + | chr5_2:5244725-5244744 | None:intergenic | 40.0% | |
AAACCTCAAGAATGTCCATG+AGG | + | chr5_2:5244746-5244765 | None:intergenic | 40.0% | |
TCAACAAAAACCGAGGAAAG+AGG | - | chr5_2:5244807-5244826 | Msa0751770:CDS | 40.0% | |
!! | CAGCTTGTTGATCCATTTGT+GGG | + | chr5_2:5244962-5244981 | None:intergenic | 40.0% |
!! | TCAGCTTGTTGATCCATTTG+TGG | + | chr5_2:5244963-5244982 | None:intergenic | 40.0% |
ACAAATGGATCAACAAGCTG+AGG | - | chr5_2:5244962-5244981 | Msa0751770:intron | 40.0% | |
GGAACGTGCTAAACAAAAGA+TGG | - | chr5_2:5245067-5245086 | Msa0751770:intron | 40.0% | |
AATTGATGCCAAAGTCATCC+AGG | - | chr5_2:5245091-5245110 | Msa0751770:intron | 40.0% | |
!!! | TGTTTTCAGTTTTTGGGTGG+TGG | - | chr5_2:5245182-5245201 | Msa0751770:intron | 40.0% |
!!! | GTTTTCAGTTTTTGGGTGGT+GGG | - | chr5_2:5245183-5245202 | Msa0751770:intron | 40.0% |
!!! | TTTTCAGTTTTTGGGTGGTG+GGG | - | chr5_2:5245184-5245203 | Msa0751770:intron | 40.0% |
GCAATTTGCAAGCATAATGC+TGG | + | chr5_2:5245275-5245294 | None:intergenic | 40.0% | |
GGTCAGTATCAAGCATCAAA+AGG | + | chr5_2:5245377-5245396 | None:intergenic | 40.0% | |
CAAGCTGGGTTCAGTATAAA+AGG | + | chr5_2:5245420-5245439 | None:intergenic | 40.0% | |
!!! | CTGAACCCAGCTTGTTTTTA+TGG | - | chr5_2:5245426-5245445 | Msa0751770:CDS | 40.0% |
! | TATCGTTGGTTGAGCATTTG+AGG | - | chr5_2:5245667-5245686 | Msa0751770:CDS | 40.0% |
! | ATCGTTGGTTGAGCATTTGA+GGG | - | chr5_2:5245668-5245687 | Msa0751770:CDS | 40.0% |
GCTAATGCTCAAAATCAGGT+AGG | + | chr5_2:5245752-5245771 | None:intergenic | 40.0% | |
GTAAGATTGAAATGGCAGCA+GGG | + | chr5_2:5245804-5245823 | None:intergenic | 40.0% | |
CAACATTTCTCTTCTGTCCT+GGG | + | chr5_2:5245899-5245918 | None:intergenic | 40.0% | |
CCAAAATTCCTCATCTGATC+GGG | + | chr5_2:5245998-5246017 | None:intergenic | 40.0% | |
GCCAAAATTCCTCATCTGAT+CGG | + | chr5_2:5245999-5246018 | None:intergenic | 40.0% | |
!!! | ATTTTGGCTGTTCGAGAGAA+TGG | - | chr5_2:5246011-5246030 | Msa0751770:intron | 40.0% |
GGATGAAGATAGAAGGCAAA+AGG | - | chr5_2:5246032-5246051 | Msa0751770:intron | 40.0% | |
GGTATACTCGGCACTAAATA+AGG | - | chr5_2:5246101-5246120 | Msa0751770:intron | 40.0% | |
AAAGCGGACAAGAAAAGAAG+TGG | - | chr5_2:5246164-5246183 | Msa0751770:intron | 40.0% | |
GTTAGAGTTAAGCAACACCA+TGG | - | chr5_2:5246341-5246360 | Msa0751770:intron | 40.0% | |
TTCATGCTTGAACCTCTTAG+AGG | + | chr5_2:5246409-5246428 | None:intergenic | 40.0% | |
ATCAAGGATACAGGTGTAAG+TGG | - | chr5_2:5246453-5246472 | Msa0751770:intron | 40.0% | |
! | TGAACGAGCATGTGTTTTCT+TGG | - | chr5_2:5246478-5246497 | Msa0751770:intron | 40.0% |
GTTCATTATCTGATGCCAGA+GGG | - | chr5_2:5246541-5246560 | Msa0751770:intron | 40.0% | |
AGATACTACCAAGTTCCTTC+TGG | - | chr5_2:5246716-5246735 | Msa0751770:five_prime_UTR | 40.0% | |
GGAGCAATTAGGTCGTTGTT+TGG | + | chr5_2:5239987-5240006 | None:intergenic | 45.0% | |
TGAAAGCTCGTACTCAAGCT+CGG | - | chr5_2:5240032-5240051 | Msa0751770:three_prime_UTR | 45.0% | |
TAACACCAGACACATGTCTC+AGG | - | chr5_2:5240249-5240268 | Msa0751770:CDS | 45.0% | |
AATCTCCTGAGACATGTGTC+TGG | + | chr5_2:5240257-5240276 | None:intergenic | 45.0% | |
GAATAGGTTTGCGTTGGAAC+TGG | - | chr5_2:5240337-5240356 | Msa0751770:CDS | 45.0% | |
ATAGGTTTGCGTTGGAACTG+GGG | - | chr5_2:5240339-5240358 | Msa0751770:CDS | 45.0% | |
AAGTGCTTGCTCGAGCTTTA+TGG | - | chr5_2:5240378-5240397 | Msa0751770:CDS | 45.0% | |
! | GCTCGAGCTTTATGGACTAA+AGG | - | chr5_2:5240386-5240405 | Msa0751770:CDS | 45.0% |
!!! | GTATGTGTTTGTTTTGGCGG+TGG | - | chr5_2:5240474-5240493 | Msa0751770:CDS | 45.0% |
TGAAATGCTATGACGTCGTG+TGG | - | chr5_2:5240559-5240578 | Msa0751770:CDS | 45.0% | |
CATTCGCATACGACAAGCAT+GGG | + | chr5_2:5240670-5240689 | None:intergenic | 45.0% | |
TCATTCGCATACGACAAGCA+TGG | + | chr5_2:5240671-5240690 | None:intergenic | 45.0% | |
GACATGCAAACAGGCAGATA+TGG | + | chr5_2:5240766-5240785 | None:intergenic | 45.0% | |
GACAAGAAACGTGTCCTTGT+CGG | - | chr5_2:5240803-5240822 | Msa0751770:intron | 45.0% | |
CCGACAAGCAATTGTTTGAC+TGG | - | chr5_2:5240920-5240939 | Msa0751770:intron | 45.0% | |
CATTGGAGATCCATTTGCCA+TGG | - | chr5_2:5240975-5240994 | Msa0751770:intron | 45.0% | |
TCATCAGCATCCATGGCAAA+TGG | + | chr5_2:5240988-5241007 | None:intergenic | 45.0% | |
TTTAAACCAAGTGGGGGAGA+GGG | + | chr5_2:5241066-5241085 | None:intergenic | 45.0% | |
ATTTAAACCAAGTGGGGGAG+AGG | + | chr5_2:5241067-5241086 | None:intergenic | 45.0% | |
ACAGAGGAATGATGCTGTTC+AGG | - | chr5_2:5241356-5241375 | Msa0751770:intron | 45.0% | |
ACAATATTGCAGGCATGGCA+TGG | - | chr5_2:5241700-5241719 | Msa0751770:CDS | 45.0% | |
GCTTGTAAATTTGGGAGCAG+CGG | - | chr5_2:5241864-5241883 | Msa0751770:CDS | 45.0% | |
ATCACCTCTTGAGGAAGATG+AGG | - | chr5_2:5241972-5241991 | Msa0751770:CDS | 45.0% | |
GAGCAACCATCTATGCTTCA+AGG | - | chr5_2:5242221-5242240 | Msa0751770:intron | 45.0% | |
CAACCATCTATGCTTCAAGG+CGG | - | chr5_2:5242224-5242243 | Msa0751770:intron | 45.0% | |
! | ATGGAATACAAGGGTGTGAC+TGG | - | chr5_2:5242380-5242399 | Msa0751770:intron | 45.0% |
!!! | GACTGGCCCTTTTTTGATTG+TGG | - | chr5_2:5242397-5242416 | Msa0751770:intron | 45.0% |
CAATTTGGCAGAACAGCCTT+TGG | + | chr5_2:5242425-5242444 | None:intergenic | 45.0% | |
CAAAGGCTGTTCTGCCAAAT+TGG | - | chr5_2:5242423-5242442 | Msa0751770:intron | 45.0% | |
CCCAAACAGGAGAACATGTT+AGG | + | chr5_2:5242510-5242529 | None:intergenic | 45.0% | |
ATGTTCTCCTGTTTGGGAGA+AGG | - | chr5_2:5242513-5242532 | Msa0751770:intron | 45.0% | |
TCCTGTTTGGGAGAAGGTAA+TGG | - | chr5_2:5242519-5242538 | Msa0751770:intron | 45.0% | |
TCCATTACCTTCTCCCAAAC+AGG | + | chr5_2:5242523-5242542 | None:intergenic | 45.0% | |
!! | ATGATGGACGAATGGATGAG+AGG | - | chr5_2:5242615-5242634 | Msa0751770:intron | 45.0% |
AGGAAGAAATATCAGGGGAG+GGG | - | chr5_2:5242648-5242667 | Msa0751770:intron | 45.0% | |
GAGAGTGATAAAAATCGGGG+TGG | - | chr5_2:5242917-5242936 | Msa0751770:intron | 45.0% | |
GAGTGATAAAAATCGGGGTG+GGG | - | chr5_2:5242919-5242938 | Msa0751770:intron | 45.0% | |
GAGGAAAGAAAAAATCCGGG+TGG | + | chr5_2:5242945-5242964 | None:intergenic | 45.0% | |
AAGAGATAGTCCAGAGAGAG+AGG | + | chr5_2:5243033-5243052 | None:intergenic | 45.0% | |
CTGGACTATCTCTTTCTTCC+TGG | - | chr5_2:5243039-5243058 | Msa0751770:CDS | 45.0% | |
TACACTGTATTGTGGGGCAA+TGG | + | chr5_2:5243108-5243127 | None:intergenic | 45.0% | |
TGAGACCATGGCATATAGGA+CGG | - | chr5_2:5243231-5243250 | Msa0751770:intron | 45.0% | |
GAACGAAGACTTCTGTTGAC+CGG | - | chr5_2:5243521-5243540 | Msa0751770:intron | 45.0% | |
TGGGAGGAGAAAATTGAGCA+GGG | + | chr5_2:5243582-5243601 | None:intergenic | 45.0% | |
TTGGGAGGAGAAAATTGAGC+AGG | + | chr5_2:5243583-5243602 | None:intergenic | 45.0% | |
CACATCAACTCGATCTGCAA+AGG | + | chr5_2:5243651-5243670 | None:intergenic | 45.0% | |
AGAAACTCACCTGATGCAGA+CGG | + | chr5_2:5243709-5243728 | None:intergenic | 45.0% | |
TAAGGCCCTTCATACTACGA+AGG | - | chr5_2:5243800-5243819 | Msa0751770:intron | 45.0% | |
ACTACGAAGGAAAAAGGCTG+AGG | - | chr5_2:5243813-5243832 | Msa0751770:intron | 45.0% | |
TTATCAACAAGTGACCGACG+TGG | - | chr5_2:5243906-5243925 | Msa0751770:CDS | 45.0% | |
TATCAACAAGTGACCGACGT+GGG | - | chr5_2:5243907-5243926 | Msa0751770:CDS | 45.0% | |
AAATAACCCTTGGCAGAAGC+AGG | + | chr5_2:5244058-5244077 | None:intergenic | 45.0% | |
CCAAATAGAATGGGGTTGGA+TGG | + | chr5_2:5244089-5244108 | None:intergenic | 45.0% | |
CCATCCAACCCCATTCTATT+TGG | - | chr5_2:5244086-5244105 | Msa0751770:intron | 45.0% | |
CTCGCTTTACGAAAGAGAGA+AGG | + | chr5_2:5244261-5244280 | None:intergenic | 45.0% | |
TAACCATCCCTACCTCTTTG+TGG | - | chr5_2:5244593-5244612 | Msa0751770:intron | 45.0% | |
AACCATCCCTACCTCTTTGT+GGG | - | chr5_2:5244594-5244613 | Msa0751770:intron | 45.0% | |
!!! | TACGGAGTTTTGGAAGCAAG+CGG | + | chr5_2:5244683-5244702 | None:intergenic | 45.0% |
TTCACAAATGACTCGCCTCA+TGG | - | chr5_2:5244728-5244747 | Msa0751770:CDS | 45.0% | |
TGATGGCTCAACAAAAACCG+AGG | - | chr5_2:5244800-5244819 | Msa0751770:CDS | 45.0% | |
TAGAAGGGAACCTCTTTCCT+CGG | + | chr5_2:5244820-5244839 | None:intergenic | 45.0% | |
! | TTTCTTTTGAGCACTCGTGC+CGG | - | chr5_2:5244876-5244895 | Msa0751770:CDS | 45.0% |
CAAGTTCAAACCAAGACCTC+CGG | + | chr5_2:5244898-5244917 | None:intergenic | 45.0% | |
CAGTGATTGGAACCCACAAA+TGG | - | chr5_2:5244947-5244966 | Msa0751770:CDS | 45.0% | |
! | CTTCTTTTGCCCAATGCGAT+GGG | + | chr5_2:5244994-5245013 | None:intergenic | 45.0% |
TAGTGTGGGATCCATTGAAG+AGG | - | chr5_2:5245037-5245056 | Msa0751770:intron | 45.0% | |
TTGTATTGAAAAGGCCAGCC+TGG | + | chr5_2:5245112-5245131 | None:intergenic | 45.0% | |
!!! | TTTCAGTTTTTGGGTGGTGG+GGG | - | chr5_2:5245185-5245204 | Msa0751770:intron | 45.0% |
CGTAAGATTGAAATGGCAGC+AGG | + | chr5_2:5245805-5245824 | None:intergenic | 45.0% | |
TATTTCAATTCGTGCAGCCC+AGG | - | chr5_2:5245879-5245898 | Msa0751770:intron | 45.0% | |
CCAACATTTCTCTTCTGTCC+TGG | + | chr5_2:5245900-5245919 | None:intergenic | 45.0% | |
CCAGGACAGAAGAGAAATGT+TGG | - | chr5_2:5245897-5245916 | Msa0751770:intron | 45.0% | |
GGACAGAAGAGAAATGTTGG+AGG | - | chr5_2:5245900-5245919 | Msa0751770:intron | 45.0% | |
TTGGAGGAGATTATGCGTAG+AGG | - | chr5_2:5245916-5245935 | Msa0751770:intron | 45.0% | |
CGGTTAATTTCTCTCTCGCT+TGG | + | chr5_2:5245967-5245986 | None:intergenic | 45.0% | |
! | CCCGATCAGATGAGGAATTT+TGG | - | chr5_2:5245995-5246014 | Msa0751770:intron | 45.0% |
GAACTACAGATCTCGTCTCA+TGG | - | chr5_2:5246056-5246075 | Msa0751770:intron | 45.0% | |
ATGAGAACGAACTGCCAGAT+TGG | - | chr5_2:5246079-5246098 | Msa0751770:intron | 45.0% | |
TGAGAACGAACTGCCAGATT+GGG | - | chr5_2:5246080-5246099 | Msa0751770:intron | 45.0% | |
ACTGCCAGATTGGGTATACT+CGG | - | chr5_2:5246089-5246108 | Msa0751770:intron | 45.0% | |
AGCACTGCTGTCAAAAGCTT+TGG | + | chr5_2:5246136-5246155 | None:intergenic | 45.0% | |
! | TTTGACAGCAGTGCTGTTAC+TGG | - | chr5_2:5246141-5246160 | Msa0751770:intron | 45.0% |
TCTACAATGGATGAAGGCTG+TGG | - | chr5_2:5246209-5246228 | Msa0751770:intron | 45.0% | |
TTTGTGCATGGCTGTCGATA+GGG | + | chr5_2:5246290-5246309 | None:intergenic | 45.0% | |
TGTCATCACTCGTTTGTGCA+TGG | + | chr5_2:5246302-5246321 | None:intergenic | 45.0% | |
TAACAACCTTTCTTCTGCCC+CGG | + | chr5_2:5246325-5246344 | None:intergenic | 45.0% | |
AAGATCAAGCTATCCTAGCC+AGG | - | chr5_2:5246518-5246537 | Msa0751770:intron | 45.0% | |
AGATCAAGCTATCCTAGCCA+GGG | - | chr5_2:5246519-5246538 | Msa0751770:intron | 45.0% | |
TCAGATAATGAACCCTGGCT+AGG | + | chr5_2:5246534-5246553 | None:intergenic | 45.0% | |
TGGCATCAGATAATGAACCC+TGG | + | chr5_2:5246539-5246558 | None:intergenic | 45.0% | |
GGTTCATTATCTGATGCCAG+AGG | - | chr5_2:5246540-5246559 | Msa0751770:intron | 45.0% | |
TCCATTTGAATTCTGCCCTC+TGG | + | chr5_2:5246559-5246578 | None:intergenic | 45.0% | |
TACAACAGCCAGAAGGAACT+TGG | + | chr5_2:5246727-5246746 | None:intergenic | 45.0% | |
!!! | ATTATAATTTTTTCATATAT+TGG | - | chr5_2:5242116-5242135 | Msa0751770:CDS | 5.0% |
TAGGTTTGCGTTGGAACTGG+GGG | - | chr5_2:5240340-5240359 | Msa0751770:CDS | 50.0% | |
AATGCTATGACGTCGTGTGG+TGG | - | chr5_2:5240562-5240581 | Msa0751770:CDS | 50.0% | |
ATGCTATGACGTCGTGTGGT+GGG | - | chr5_2:5240563-5240582 | Msa0751770:CDS | 50.0% | |
TTGCAGCTAGCGGAGTTACA+GGG | - | chr5_2:5240841-5240860 | Msa0751770:intron | 50.0% | |
GTTACAGGGGAAGGTTCGAA+TGG | - | chr5_2:5240855-5240874 | Msa0751770:intron | 50.0% | |
TGTTTGACTGGGGCATGATG+CGG | - | chr5_2:5240932-5240951 | Msa0751770:intron | 50.0% | |
GGATCTCCAATGCCATAAGG+AGG | + | chr5_2:5240967-5240986 | None:intergenic | 50.0% | |
TTAAACCAAGTGGGGGAGAG+GGG | + | chr5_2:5241065-5241084 | None:intergenic | 50.0% | |
TATTGCAGGCATGGCATGGA+AGG | - | chr5_2:5241704-5241723 | Msa0751770:CDS | 50.0% | |
GGCAAAGACAACGTGCAACT+CGG | - | chr5_2:5241725-5241744 | Msa0751770:CDS | 50.0% | |
GCAAAGACAACGTGCAACTC+GGG | - | chr5_2:5241726-5241745 | Msa0751770:CDS | 50.0% | |
TCTCCGCCTTGAAGCATAGA+TGG | + | chr5_2:5242230-5242249 | None:intergenic | 50.0% | |
TGGAGCCCTTCTATCTGGTA+TGG | + | chr5_2:5242260-5242279 | None:intergenic | 50.0% | |
TTGGCTGATGAAATGGGGCT+TGG | - | chr5_2:5242320-5242339 | Msa0751770:intron | 50.0% | |
GCGAACTCGTTGACCCAATT+TGG | + | chr5_2:5242440-5242459 | None:intergenic | 50.0% | |
GGTCAACGAGTTCGCAACAT+GGG | - | chr5_2:5242445-5242464 | Msa0751770:intron | 50.0% | |
TAGCAAGAACCCTGGACAAC+AGG | - | chr5_2:5242795-5242814 | Msa0751770:CDS | 50.0% | |
AGAACCCTGGACAACAGGTA+TGG | - | chr5_2:5242800-5242819 | Msa0751770:CDS | 50.0% | |
GAAACAGAGAAGATGGAGGG+TGG | + | chr5_2:5242991-5243010 | None:intergenic | 50.0% | |
TCTTTCTCAGCCTCTCTCTC+TGG | - | chr5_2:5243020-5243039 | Msa0751770:CDS | 50.0% | |
TCTCAGGGGGTCTGAAAAGA+AGG | + | chr5_2:5243066-5243085 | None:intergenic | 50.0% | |
TATTGTGGGGCAATGGAGGA+AGG | + | chr5_2:5243101-5243120 | None:intergenic | 50.0% | |
ACTGTATTGTGGGGCAATGG+AGG | + | chr5_2:5243105-5243124 | None:intergenic | 50.0% | |
! | GCTGTTCTGAATTGGGGTAC+CGG | + | chr5_2:5243543-5243562 | None:intergenic | 50.0% |
! | CTGCAGGCTGTTCTGAATTG+GGG | + | chr5_2:5243549-5243568 | None:intergenic | 50.0% |
! | CCTGCAGGCTGTTCTGAATT+GGG | + | chr5_2:5243550-5243569 | None:intergenic | 50.0% |
! | TCCTGCAGGCTGTTCTGAAT+TGG | + | chr5_2:5243551-5243570 | None:intergenic | 50.0% |
AGAACAGCCTGCAGGAATTG+TGG | - | chr5_2:5243555-5243574 | Msa0751770:intron | 50.0% | |
GATTATTCGCCGTCTGCATC+AGG | - | chr5_2:5243697-5243716 | Msa0751770:intron | 50.0% | |
! | GGCAGAGTTGGGTTAGACTA+CGG | - | chr5_2:5243928-5243947 | Msa0751770:CDS | 50.0% |
! | ATATTGGCCTGCTTCTGCCA+AGG | - | chr5_2:5244048-5244067 | Msa0751770:CDS | 50.0% |
! | TATTGGCCTGCTTCTGCCAA+GGG | - | chr5_2:5244049-5244068 | Msa0751770:CDS | 50.0% |
CAGAGACGGATAGTTTGGGA+TGG | + | chr5_2:5244428-5244447 | None:intergenic | 50.0% | |
TTCCCACAAAGAGGTAGGGA+TGG | + | chr5_2:5244599-5244618 | None:intergenic | 50.0% | |
! | AGGAGATCGTCAGAGCATCA+GGG | - | chr5_2:5244640-5244659 | Msa0751770:CDS | 50.0% |
CTTCCAAAACTCCGTAGAGC+TGG | - | chr5_2:5244687-5244706 | Msa0751770:CDS | 50.0% | |
! | TGACCAGCTCTACGGAGTTT+TGG | + | chr5_2:5244693-5244712 | None:intergenic | 50.0% |
GGACTCTATGACCAGCTCTA+CGG | + | chr5_2:5244701-5244720 | None:intergenic | 50.0% | |
TCGCCTCATGGACATTCTTG+AGG | - | chr5_2:5244740-5244759 | Msa0751770:CDS | 50.0% | |
! | CCTTCTTTTGCCCAATGCGA+TGG | + | chr5_2:5244995-5245014 | None:intergenic | 50.0% |
CCATCGCATTGGGCAAAAGA+AGG | - | chr5_2:5244992-5245011 | Msa0751770:intron | 50.0% | |
GAAAGAGTTTGAGAAGGGCC+AGG | + | chr5_2:5245560-5245579 | None:intergenic | 50.0% | |
! | AGTGCCGAGTATACCCAATC+TGG | + | chr5_2:5246096-5246115 | None:intergenic | 50.0% |
! | GCAGTGCTGTTACTGGAAAG+CGG | - | chr5_2:5246148-5246167 | Msa0751770:intron | 50.0% |
TGGATGAAGGCTGTGGAAAG+CGG | - | chr5_2:5246216-5246235 | Msa0751770:intron | 50.0% | |
GTTTGTGCATGGCTGTCGAT+AGG | + | chr5_2:5246291-5246310 | None:intergenic | 50.0% | |
GCACAAACGAGTGATGACAC+CGG | - | chr5_2:5246303-5246322 | Msa0751770:CDS | 50.0% | |
CACAAACGAGTGATGACACC+GGG | - | chr5_2:5246304-5246323 | Msa0751770:CDS | 50.0% | |
ACAAACGAGTGATGACACCG+GGG | - | chr5_2:5246305-5246324 | Msa0751770:CDS | 50.0% | |
CTTGAACCTCTTAGAGGCAG+GGG | + | chr5_2:5246403-5246422 | None:intergenic | 50.0% | |
GCTTGAACCTCTTAGAGGCA+GGG | + | chr5_2:5246404-5246423 | None:intergenic | 50.0% | |
TGCTTGAACCTCTTAGAGGC+AGG | + | chr5_2:5246405-5246424 | None:intergenic | 50.0% | |
GCCAGAGGGCAGAATTCAAA+TGG | - | chr5_2:5246555-5246574 | Msa0751770:intron | 50.0% | |
AGGTTTGCGTTGGAACTGGG+GGG | - | chr5_2:5240341-5240360 | Msa0751770:CDS | 55.0% | |
CGAGCAAGCACTTCGTCTGT+AGG | + | chr5_2:5240371-5240390 | None:intergenic | 55.0% | |
GAAACGTGTCCTTGTCGGCA+AGG | - | chr5_2:5240808-5240827 | Msa0751770:intron | 55.0% | |
CTTGCAGCTAGCGGAGTTAC+AGG | - | chr5_2:5240840-5240859 | Msa0751770:intron | 55.0% | |
TGCAGCTAGCGGAGTTACAG+GGG | - | chr5_2:5240842-5240861 | Msa0751770:intron | 55.0% | |
AAGGAAGAAACGGGATGCGG+AGG | - | chr5_2:5241014-5241033 | Msa0751770:intron | 55.0% | |
GGCTCCGCTTCATTGATCCA+AGG | - | chr5_2:5241142-5241161 | Msa0751770:intron | 55.0% | |
ACCAGATAGAAGGGCTCCAG+TGG | - | chr5_2:5242261-5242280 | Msa0751770:intron | 55.0% | |
TCCACTGGAGCCCTTCTATC+TGG | + | chr5_2:5242265-5242284 | None:intergenic | 55.0% | |
GGGTCAACGAGTTCGCAACA+TGG | - | chr5_2:5242444-5242463 | Msa0751770:intron | 55.0% | |
AGTTCGCAACATGGGCTCCT+AGG | - | chr5_2:5242453-5242472 | Msa0751770:intron | 55.0% | |
GTGTGCTCTAGCAAGAACCC+TGG | - | chr5_2:5242787-5242806 | Msa0751770:CDS | 55.0% | |
CTGGCCATACCTGTTGTCCA+GGG | + | chr5_2:5242807-5242826 | None:intergenic | 55.0% | |
ACTGGCCATACCTGTTGTCC+AGG | + | chr5_2:5242808-5242827 | None:intergenic | 55.0% | |
GGGGTCTGAAAAGAAGGTCC+AGG | + | chr5_2:5243060-5243079 | None:intergenic | 55.0% | |
AGGTAGTGCGCTAGGTCTCA+GGG | + | chr5_2:5243081-5243100 | None:intergenic | 55.0% | |
AAGGTAGTGCGCTAGGTCTC+AGG | + | chr5_2:5243082-5243101 | None:intergenic | 55.0% | |
ATGGAGGAAGGTAGTGCGCT+AGG | + | chr5_2:5243089-5243108 | None:intergenic | 55.0% | |
CCCAATTCAGAACAGCCTGC+AGG | - | chr5_2:5243547-5243566 | Msa0751770:intron | 55.0% | |
TAACCCAACTCTGCCCACGT+CGG | + | chr5_2:5243923-5243942 | None:intergenic | 55.0% | |
! | GAGGAGATCGTCAGAGCATC+AGG | - | chr5_2:5244639-5244658 | Msa0751770:CDS | 55.0% |
AGGATCGAGCCCATCGCATT+GGG | - | chr5_2:5244982-5245001 | Msa0751770:intron | 55.0% | |
GATGCCAAAGTCATCCAGGC+TGG | - | chr5_2:5245095-5245114 | Msa0751770:intron | 55.0% | |
AAGGCCAGCCTGGATGACTT+TGG | + | chr5_2:5245102-5245121 | None:intergenic | 55.0% | |
CGTAGAGGTAGCAGCTCACT+TGG | - | chr5_2:5245931-5245950 | Msa0751770:intron | 55.0% | |
ATGACACCGGGGCAGAAGAA+AGG | - | chr5_2:5246316-5246335 | Msa0751770:CDS | 55.0% | |
AGAGGCAGGGGTCCCATAAA+AGG | + | chr5_2:5246391-5246410 | None:intergenic | 55.0% | |
! | ACGTCGTGTGGTGGGAGTGT+GGG | - | chr5_2:5240571-5240590 | Msa0751770:CDS | 60.0% |
! | GTGGTGGGAGTGTGGGCAAA+TGG | - | chr5_2:5240578-5240597 | Msa0751770:CDS | 60.0% |
GCTAGCGGAGTTACAGGGGA+AGG | - | chr5_2:5240846-5240865 | Msa0751770:intron | 60.0% | |
ACTGGGGCATGATGCGGTTG+CGG | - | chr5_2:5240938-5240957 | Msa0751770:intron | 60.0% | |
CGGCGTCCTCCTTATGGCAT+TGG | - | chr5_2:5240958-5240977 | Msa0751770:intron | 60.0% | |
GTAGTGCGCTAGGTCTCAGG+GGG | + | chr5_2:5243079-5243098 | None:intergenic | 60.0% | |
GGTAGTGCGCTAGGTCTCAG+GGG | + | chr5_2:5243080-5243099 | None:intergenic | 60.0% | |
GCAGGGACCACAATTCCTGC+AGG | + | chr5_2:5243565-5243584 | None:intergenic | 60.0% | |
TGACCGACGTGGGCAGAGTT+GGG | - | chr5_2:5243917-5243936 | Msa0751770:CDS | 60.0% | |
! | CTTTTGAGCACTCGTGCCGG+AGG | - | chr5_2:5244879-5244898 | Msa0751770:CDS | 60.0% |
GAGGATCGAGCCCATCGCAT+TGG | - | chr5_2:5244981-5245000 | Msa0751770:intron | 60.0% | |
CATCTGATCGGGCTGCAAGG+CGG | + | chr5_2:5245987-5246006 | None:intergenic | 60.0% | |
CCTCATCTGATCGGGCTGCA+AGG | + | chr5_2:5245990-5246009 | None:intergenic | 60.0% | |
CCTTGCAGCCCGATCAGATG+AGG | - | chr5_2:5245987-5246006 | Msa0751770:intron | 60.0% | |
GTGCATGGCTGTCGATAGGG+AGG | + | chr5_2:5246287-5246306 | None:intergenic | 60.0% | |
ATGGGACCCCTGCCTCTAAG+AGG | - | chr5_2:5246394-5246413 | Msa0751770:intron | 60.0% | |
! | GACGTCGTGTGGTGGGAGTG+TGG | - | chr5_2:5240570-5240589 | Msa0751770:CDS | 65.0% |
CGGTTGCGGCGTCCTCCTTA+TGG | - | chr5_2:5240952-5240971 | Msa0751770:intron | 65.0% | |
AAAATCGGGGTGGGGCCACC+CGG | - | chr5_2:5242927-5242946 | Msa0751770:intron | 65.0% | |
GTGACCGACGTGGGCAGAGT+TGG | - | chr5_2:5243916-5243935 | Msa0751770:CDS | 65.0% | |
AGCACTCGTGCCGGAGGTCT+TGG | - | chr5_2:5244885-5244904 | Msa0751770:CDS | 65.0% | |
CAGTGCCCCTCTCCCCCACT+TGG | - | chr5_2:5241057-5241076 | Msa0751770:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 5239894 | 5246797 | 5239894 | ID=Msa0751770;Name=Msa0751770 |
chr5_2 | mRNA | 5239894 | 5246797 | 5239894 | ID=Msa0751770-mRNA-1;Parent=Msa0751770;Name=Msa0751770-mRNA-1;_AED=0.06;_eAED=0.06;_QI=137|1|1|1|1|1|11|204|990 |
chr5_2 | exon | 5239894 | 5240795 | 5239894 | ID=Msa0751770-mRNA-1:exon:2139;Parent=Msa0751770-mRNA-1 |
chr5_2 | exon | 5241551 | 5242153 | 5241551 | ID=Msa0751770-mRNA-1:exon:2138;Parent=Msa0751770-mRNA-1 |
chr5_2 | exon | 5242742 | 5242895 | 5242742 | ID=Msa0751770-mRNA-1:exon:2137;Parent=Msa0751770-mRNA-1 |
chr5_2 | exon | 5242973 | 5243180 | 5242973 | ID=Msa0751770-mRNA-1:exon:2136;Parent=Msa0751770-mRNA-1 |
chr5_2 | exon | 5243875 | 5244093 | 5243875 | ID=Msa0751770-mRNA-1:exon:2135;Parent=Msa0751770-mRNA-1 |
chr5_2 | exon | 5244217 | 5244476 | 5244217 | ID=Msa0751770-mRNA-1:exon:2134;Parent=Msa0751770-mRNA-1 |
chr5_2 | exon | 5244605 | 5244979 | 5244605 | ID=Msa0751770-mRNA-1:exon:2133;Parent=Msa0751770-mRNA-1 |
chr5_2 | exon | 5245314 | 5245463 | 5245314 | ID=Msa0751770-mRNA-1:exon:2132;Parent=Msa0751770-mRNA-1 |
chr5_2 | exon | 5245656 | 5245844 | 5245656 | ID=Msa0751770-mRNA-1:exon:2131;Parent=Msa0751770-mRNA-1 |
chr5_2 | exon | 5246284 | 5246348 | 5246284 | ID=Msa0751770-mRNA-1:exon:2130;Parent=Msa0751770-mRNA-1 |
chr5_2 | exon | 5246609 | 5246797 | 5246609 | ID=Msa0751770-mRNA-1:exon:2129;Parent=Msa0751770-mRNA-1 |
chr5_2 | five_prime_UTR | 5246661 | 5246797 | 5246661 | ID=Msa0751770-mRNA-1:five_prime_utr;Parent=Msa0751770-mRNA-1 |
chr5_2 | CDS | 5246609 | 5246660 | 5246609 | ID=Msa0751770-mRNA-1:cds;Parent=Msa0751770-mRNA-1 |
chr5_2 | CDS | 5246284 | 5246348 | 5246284 | ID=Msa0751770-mRNA-1:cds;Parent=Msa0751770-mRNA-1 |
chr5_2 | CDS | 5245656 | 5245844 | 5245656 | ID=Msa0751770-mRNA-1:cds;Parent=Msa0751770-mRNA-1 |
chr5_2 | CDS | 5245314 | 5245463 | 5245314 | ID=Msa0751770-mRNA-1:cds;Parent=Msa0751770-mRNA-1 |
chr5_2 | CDS | 5244605 | 5244979 | 5244605 | ID=Msa0751770-mRNA-1:cds;Parent=Msa0751770-mRNA-1 |
chr5_2 | CDS | 5244217 | 5244476 | 5244217 | ID=Msa0751770-mRNA-1:cds;Parent=Msa0751770-mRNA-1 |
chr5_2 | CDS | 5243875 | 5244093 | 5243875 | ID=Msa0751770-mRNA-1:cds;Parent=Msa0751770-mRNA-1 |
chr5_2 | CDS | 5242973 | 5243180 | 5242973 | ID=Msa0751770-mRNA-1:cds;Parent=Msa0751770-mRNA-1 |
chr5_2 | CDS | 5242742 | 5242895 | 5242742 | ID=Msa0751770-mRNA-1:cds;Parent=Msa0751770-mRNA-1 |
chr5_2 | CDS | 5241551 | 5242153 | 5241551 | ID=Msa0751770-mRNA-1:cds;Parent=Msa0751770-mRNA-1 |
chr5_2 | CDS | 5240098 | 5240795 | 5240098 | ID=Msa0751770-mRNA-1:cds;Parent=Msa0751770-mRNA-1 |
chr5_2 | three_prime_UTR | 5239894 | 5240097 | 5239894 | ID=Msa0751770-mRNA-1:three_prime_utr;Parent=Msa0751770-mRNA-1 |
Gene Sequence |
Protein sequence |