AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0761230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0761230 MtrunA17_Chr5g0411431 91.365 498 8 2 1 464 1 497 0.0 907
Msa0761230 MtrunA17_Chr4g0049371 60.852 493 149 5 1 455 32 518 0.0 597
Msa0761230 MtrunA17_Chr2g0280091 61.111 450 139 5 9 423 12 460 0.0 532
Msa0761230 MtrunA17_Chr2g0280111 50.204 245 71 3 218 462 14 207 5.14e-71 224
Msa0761230 MtrunA17_Chr2g0280101 58.824 187 37 3 32 182 1 183 1.67e-63 204
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0761230 AT2G22730.3 58.163 490 156 3 12 452 44 533 0.0 568
Msa0761230 AT2G22730.6 59.494 474 149 6 12 452 44 507 0.0 560
Msa0761230 AT2G22730.2 59.158 475 140 4 12 432 44 518 0.0 556
Msa0761230 AT5G64500.1 57.917 480 142 4 10 455 29 482 0.0 550
Msa0761230 AT2G22730.1 60.566 459 133 7 12 432 44 492 0.0 548
Msa0761230 AT2G22730.7 64.267 389 119 3 64 432 19 407 1.16e-178 507
Msa0761230 AT5G65687.1 54.060 468 169 4 3 433 11 469 3.75e-173 495
Msa0761230 AT2G22730.5 56.234 393 123 3 10 353 42 434 3.90e-148 432
Msa0761230 AT2G22730.4 56.548 336 103 6 12 314 44 369 1.97e-125 370

Find 135 sgRNAs with CRISPR-Local

Find 723 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACAATTGCAGATTCTTTC+TGG 0.112586 5_2:-18306188 Msa0761230:intron
TTTGATGTTTGTTGGTAAAA+AGG 0.152282 5_2:-18303041 Msa0761230:three_prime_UTR
ATACAATTCTCTAAGCTTTC+AGG 0.162994 5_2:-18302706 None:intergenic
TTAACTGGCGCGTTGCATTC+TGG 0.179066 5_2:-18309784 Msa0761230:CDS
CTTTCTGGAGCAACATTTCT+AGG 0.189447 5_2:-18306173 Msa0761230:CDS
TGTCAGGTTAACATCCAAAT+TGG 0.197358 5_2:-18307714 Msa0761230:intron
CACAATCCATTCCGGCTTAT+TGG 0.217839 5_2:-18311708 Msa0761230:CDS
GGTGAACTGATTCCCCAATT+TGG 0.235239 5_2:+18307700 None:intergenic
AGTTCCACTTATCATGATAT+TGG 0.245696 5_2:-18302936 Msa0761230:three_prime_UTR
GAAACAAATGTTTCAGAAAA+TGG 0.247532 5_2:-18309561 Msa0761230:CDS
TCTTTCTTGCTGCTGGAGTA+TGG 0.268800 5_2:-18303673 Msa0761230:CDS
TTCTGAAACATTTGTTTCAT+TGG 0.270120 5_2:+18309566 None:intergenic
ATGCAACGCGCCAGTTAAAT+TGG 0.271854 5_2:+18309789 None:intergenic
TCATTGGAGCTTACTCCTAC+TGG 0.284489 5_2:-18307390 Msa0761230:CDS
ATTGGGAGGTTGACCAGATT+TGG 0.287964 5_2:+18313508 None:intergenic
ACTGCTCTGGGATATGTTTA+TGG 0.289597 5_2:-18311289 Msa0761230:CDS
TCCCTTCCGCACCACTCGTT+GGG 0.299200 5_2:-18304266 Msa0761230:CDS
ATAAAAGTGCATGAGAAATT+AGG 0.307612 5_2:+18303182 None:intergenic
AAAATCCCTCCCTGCGAAAA+TGG 0.311511 5_2:-18313534 Msa0761230:exon
ATAATCAGTCATATAGAAAA+TGG 0.318252 5_2:-18303075 Msa0761230:three_prime_UTR
ACGGTTTCAATCCATATCTT+TGG 0.319516 5_2:-18304294 Msa0761230:CDS
ATAGCTAGCAATGGTGTTAA+TGG 0.322297 5_2:-18313302 Msa0761230:CDS
TAACTGGCGCGTTGCATTCT+GGG 0.323509 5_2:-18309783 Msa0761230:CDS
GTGTATGTTATAAATGTTCT+AGG 0.327781 5_2:-18307638 Msa0761230:intron
AACAATCTCAAATGCTTTCA+AGG 0.334440 5_2:-18306646 Msa0761230:intron
GTCAGGTTAACATCCAAATT+GGG 0.335905 5_2:-18307713 Msa0761230:intron
ATTACAATAATTACATGAAA+TGG 0.336653 5_2:+18302816 None:intergenic
TTGGTGTTGGATTGTCTGTT+TGG 0.350808 5_2:-18311689 Msa0761230:CDS
CTGCATATCGTTCAAGAATC+TGG 0.363864 5_2:+18307679 None:intergenic
AAGTTTGAGGCCGCTGTCTA+TGG 0.367718 5_2:-18304325 Msa0761230:CDS
TCACTTGGATCCTCTGATAA+AGG 0.376960 5_2:+18308392 None:intergenic
ACCACTCGTTGGGGTCCTTC+AGG 0.384973 5_2:-18304256 Msa0761230:intron
AGGTTGGAAGCCAATTTAAC+TGG 0.385039 5_2:-18309799 Msa0761230:CDS
CATTGGAGCTTACTCCTACT+GGG 0.388480 5_2:-18307389 Msa0761230:CDS
CGGAGAGAAACATAATTTAC+TGG 0.389073 5_2:+18304360 None:intergenic
GTTTGGACATTTGCAGTAGC+TGG 0.394467 5_2:-18311672 Msa0761230:CDS
GGGGTAAACCACGAGGGATT+GGG 0.396051 5_2:+18313491 None:intergenic
GCGAAAATGGTATCCAAATC+TGG 0.400514 5_2:-18313521 Msa0761230:exon
AGTAATGCTGACTTGTTGTT+TGG 0.411544 5_2:-18306738 Msa0761230:CDS
TAGCATAAACTTTACATGTC+TGG 0.416323 5_2:-18303015 Msa0761230:three_prime_UTR
AAAATATTAAGCAATGGTAT+TGG 0.418515 5_2:+18313565 None:intergenic
CCATTCCGGCTTATTGGTGT+TGG 0.420889 5_2:-18311702 Msa0761230:CDS
GAGGTATTACAATTGTTTGT+GGG 0.423067 5_2:-18306716 Msa0761230:CDS
CTTGCAACTTGCACTGAGTC+TGG 0.426291 5_2:-18313275 Msa0761230:CDS
TCGAGTCTGCTTGGATTCCA+TGG 0.428396 5_2:+18309593 None:intergenic
TATACCAGCTGGAACTGCTC+TGG 0.428998 5_2:-18311302 Msa0761230:CDS
GGTGTTTGTACCGCTGGTAC+TGG 0.429250 5_2:-18313254 Msa0761230:CDS
GCTGCTGGAGTATGGTTCAT+AGG 0.430494 5_2:-18303665 Msa0761230:intron
GTCCCTTCCGCACCACTCGT+TGG 0.431542 5_2:-18304267 Msa0761230:CDS
AGGATATAGTATTTATCATA+TGG 0.439795 5_2:-18307356 Msa0761230:intron
CATGAGAAATTAGGCTTGAC+TGG 0.440789 5_2:+18303191 None:intergenic
AAGGGACATCACCAAAGATA+TGG 0.440810 5_2:+18304283 None:intergenic
GGAGGTATTACAATTGTTTG+TGG 0.441145 5_2:-18306717 Msa0761230:CDS
TCTATAGTTACGCACGCAAT+CGG 0.442340 5_2:+18313630 None:intergenic
TTCATCATCCTCTTCTCTGT+GGG 0.443860 5_2:-18306104 Msa0761230:CDS
ATGTAAGTATTGTAATTCTC+AGG 0.462418 5_2:-18302880 Msa0761230:three_prime_UTR
ATAGACAGCGGCCTCAAACT+TGG 0.466701 5_2:+18304327 None:intergenic
ATTGGATGTTCGAGTCTGCT+TGG 0.466760 5_2:+18309584 None:intergenic
ATTTGCAAATGAAAGTATCC+TGG 0.468292 5_2:-18303140 Msa0761230:three_prime_UTR
AATGCTGACTTGTTGTTTGG+AGG 0.475209 5_2:-18306735 Msa0761230:CDS
CCTTACCCCTCTTAGAGTTG+TGG 0.475804 5_2:+18303245 None:intergenic
TTTCTGGAGCAACATTTCTA+GGG 0.478051 5_2:-18306172 Msa0761230:CDS
TACCCCTCTTAGAGTTGTGG+TGG 0.482979 5_2:+18303248 None:intergenic
ATAAGTCAAACCTGTGCCAC+AGG 0.483466 5_2:+18311446 None:intergenic
GAATCCACCACAACTCTAAG+AGG 0.490677 5_2:-18303252 Msa0761230:CDS
ATTGGAGCTTACTCCTACTG+GGG 0.492710 5_2:-18307388 Msa0761230:CDS
TTTCACAGGCTAGTTGGTGT+AGG 0.499291 5_2:-18311518 Msa0761230:intron
CGAGTCTGCTTGGATTCCAT+GGG 0.500650 5_2:+18309594 None:intergenic
ATAAAGCCTTTGCAGTTGAA+AGG 0.515413 5_2:-18309716 Msa0761230:intron
GTAAGGAAGCCATTGCTTGA+AGG 0.521654 5_2:-18303228 Msa0761230:CDS
GATAAACTTGATAAATTATG+TGG 0.522113 5_2:-18313336 Msa0761230:CDS
TAAATACTATATCCTGCCTT+CGG 0.524384 5_2:+18307364 None:intergenic
GGGATATGTTTATGGTGGAT+TGG 0.526014 5_2:-18311281 Msa0761230:intron
TGACAACGCCCCTGTGGCAC+AGG 0.527056 5_2:-18311456 Msa0761230:intron
CAGATTCTTGAACGATATGC+AGG 0.528498 5_2:-18307678 Msa0761230:CDS
TGGTTACCTTTCAACTGCAA+AGG 0.529222 5_2:+18309710 None:intergenic
TCATTGCTTCCTTCAAGCAA+TGG 0.530893 5_2:+18303219 None:intergenic
GACCTGGAAAATATTTCTGC+AGG 0.532793 5_2:+18302987 None:intergenic
AACCAGACAAGCCCTTGAAA+AGG 0.534330 5_2:+18306126 None:intergenic
TTATCCAATATCATGATAAG+TGG 0.536059 5_2:+18302932 None:intergenic
GAGTCTGGTGTTTGTACCGC+TGG 0.538730 5_2:-18313260 Msa0761230:CDS
TGATGAGTGGTTACAAGACC+TGG 0.543842 5_2:+18302971 None:intergenic
CAGGCTAGTTGGTGTAGGTG+AGG 0.545214 5_2:-18311513 Msa0761230:CDS
ACCCCAACGAGTGGTGCGGA+AGG 0.546534 5_2:+18304264 None:intergenic
ATTTGGAAAATATTAAGCAA+TGG 0.550583 5_2:+18313559 None:intergenic
TTTCATCATCCTCTTCTCTG+TGG 0.550955 5_2:-18306105 Msa0761230:CDS
GCTGTCTATGGCAATTTCGA+CGG 0.554898 5_2:-18304313 Msa0761230:CDS
ATACCAGCTGGAACTGCTCT+GGG 0.555637 5_2:-18311301 Msa0761230:CDS
GTAAACCACGAGGGATTGGG+AGG 0.558247 5_2:+18313494 None:intergenic
AACTGGCGCGTTGCATTCTG+GGG 0.560555 5_2:-18309782 Msa0761230:CDS
CCAACACCAATAAGCCGGAA+TGG 0.563329 5_2:+18311702 None:intergenic
TACAATTTCATCGTGATGAG+TGG 0.564971 5_2:+18302958 None:intergenic
ATCAGTCATATAGAAAATGG+TGG 0.567602 5_2:-18303072 Msa0761230:three_prime_UTR
GCGCGTTGCATTCTGGGGTG+AGG 0.569543 5_2:-18309777 Msa0761230:CDS
CACAGGATCATATTAACGAC+TGG 0.572201 5_2:-18303727 Msa0761230:intron
CCCTTCCGCACCACTCGTTG+GGG 0.573569 5_2:-18304265 Msa0761230:CDS
GGGGCGTTGTCATCTATGAA+TGG 0.575466 5_2:+18311467 None:intergenic
TCAGGTTAACATCCAAATTG+GGG 0.578275 5_2:-18307712 Msa0761230:intron
GTTGTGTAAAACCAAGTTTG+AGG 0.579313 5_2:-18304338 Msa0761230:CDS
TATCCCAGAGCAGTTCCAGC+TGG 0.579600 5_2:+18311298 None:intergenic
GCAGTTCACCCACAGAGAAG+AGG 0.581762 5_2:+18306096 None:intergenic
CCACAACTCTAAGAGGGGTA+AGG 0.582811 5_2:-18303245 Msa0761230:CDS
ATCCTGGTTTATCTTTCAAG+CGG 0.587917 5_2:-18303124 Msa0761230:three_prime_UTR
TTCTGGAGCAACATTTCTAG+GGG 0.589012 5_2:-18306171 Msa0761230:CDS
TGGTGCTGCAAGACTTATGA+AGG 0.589092 5_2:+18311487 None:intergenic
ACAATCCAACACCAATAAGC+CGG 0.592417 5_2:+18311697 None:intergenic
ACATTTGCAGTAGCTGGATG+TGG 0.593177 5_2:-18311666 Msa0761230:CDS
AACAATTTGATCATGATGAG+TGG 0.595186 5_2:+18302909 None:intergenic
TAATTAAGTACTGACTTCAA+AGG 0.596956 5_2:-18302797 Msa0761230:three_prime_UTR
CCCCAACGAGTGGTGCGGAA+GGG 0.604338 5_2:+18304265 None:intergenic
GATGATCAAGCCTTTATCAG+AGG 0.608993 5_2:-18308402 Msa0761230:CDS
GCTCTGGGATATGTTTATGG+TGG 0.614687 5_2:-18311286 Msa0761230:CDS
ACCTGAAGGACCCCAACGAG+TGG 0.615113 5_2:+18304255 None:intergenic
AAGGACCCCAACGAGTGGTG+CGG 0.615400 5_2:+18304260 None:intergenic
CATGAGAAAGAAACGAGTAG+TGG 0.616748 5_2:-18302851 Msa0761230:three_prime_UTR
AATCCACCACAACTCTAAGA+GGG 0.620126 5_2:-18303251 Msa0761230:CDS
CGAGGAGCTATAGCTAGCAA+TGG 0.623448 5_2:-18313311 Msa0761230:CDS
TAAGTCAAACCTGTGCCACA+GGG 0.626608 5_2:+18311447 None:intergenic
TCAGTCATATAGAAAATGGT+GGG 0.628186 5_2:-18303071 Msa0761230:three_prime_UTR
TTGATAAATTATGTGGATCG+AGG 0.628982 5_2:-18313329 Msa0761230:CDS
TAAAGGCTTGATCATCTGCA+AGG 0.638519 5_2:+18308409 None:intergenic
TACCGCTTGAAAGATAAACC+AGG 0.640635 5_2:+18303122 None:intergenic
ATTGATGGTAGAAAACAGCA+TGG 0.643757 5_2:-18311345 Msa0761230:intron
CATAAACTTTACATGTCTGG+AGG 0.644604 5_2:-18303012 Msa0761230:three_prime_UTR
ACTGCTGATATTCGCCACCC+AGG 0.647364 5_2:-18306078 Msa0761230:intron
GTCAACCTCCCAATCCCTCG+TGG 0.648993 5_2:-18313499 Msa0761230:CDS
ACAAATGTTTCAGAAAATGG+AGG 0.651489 5_2:-18309558 Msa0761230:intron
AGGATCATATTAACGACTGG+AGG 0.658486 5_2:-18303724 Msa0761230:CDS
GATTCATAAAATTACCTGGG+TGG 0.669816 5_2:+18306064 None:intergenic
ATCCACCACAACTCTAAGAG+GGG 0.681620 5_2:-18303250 Msa0761230:CDS
TTGGAGCTTACTCCTACTGG+GGG 0.689241 5_2:-18307387 Msa0761230:CDS
CATAGATGACAACGCCCCTG+TGG 0.691758 5_2:-18311462 Msa0761230:CDS
GTCGAAATTGCCATAGACAG+CGG 0.694935 5_2:+18304315 None:intergenic
ATACTGAATTCCAGTACCAG+CGG 0.725228 5_2:+18313244 None:intergenic
AAGTCAAACCTGTGCCACAG+GGG 0.726998 5_2:+18311448 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTATTATTATTATT+AGG - chr5_2:18309054-18309073 Msa0761230:intron 0.0%
!! ATATAATTTAATGTTAGTTA+AGG - chr5_2:18303560-18303579 Msa0761230:intron 10.0%
!! TATAATTTAATGTTAGTTAA+GGG - chr5_2:18303561-18303580 Msa0761230:intron 10.0%
!!! AAAATTTTCAAAAATTCTTT+TGG + chr5_2:18307386-18307405 None:intergenic 10.0%
!!! TTGAAAATTTTCTTATAAAT+AGG - chr5_2:18307395-18307414 Msa0761230:CDS 10.0%
!! AAAAATTTATTCAATTTATC+GGG + chr5_2:18308845-18308864 None:intergenic 10.0%
!!! TTGAATAAATTTTTATTTTG+AGG - chr5_2:18308851-18308870 Msa0761230:intron 10.0%
!! AAATATAATAAATATGGATA+AGG + chr5_2:18310032-18310051 None:intergenic 10.0%
!! ATCCATATTTATTATATTTA+TGG - chr5_2:18310033-18310052 Msa0761230:intron 10.0%
!!! GAATTTTTTTTCAAAAAATA+TGG - chr5_2:18311044-18311063 Msa0761230:intron 10.0%
!!! TAATTCATTTTTACATTTCA+GGG - chr5_2:18303193-18303212 Msa0761230:exon 15.0%
!! ATAAAATAAGAAAATGATGA+AGG + chr5_2:18304771-18304790 None:intergenic 15.0%
!!! ATTTTCAAATAATGTTGTAT+AGG - chr5_2:18306517-18306536 Msa0761230:intron 15.0%
!! TTTATTAAAAAACCCAATAT+GGG + chr5_2:18306605-18306624 None:intergenic 15.0%
!! AAAAAACAATGTGAAAAATA+GGG - chr5_2:18307030-18307049 Msa0761230:intron 15.0%
!! TTAAAAATTAAAACAGAGAA+TGG - chr5_2:18307066-18307085 Msa0761230:intron 15.0%
!!! TTTGTCTTTTTAATATTAGT+GGG + chr5_2:18307287-18307306 None:intergenic 15.0%
!! AAAAAGACAAACATTAAATA+AGG - chr5_2:18307296-18307315 Msa0761230:intron 15.0%
!! AAAAGACAAACATTAAATAA+GGG - chr5_2:18307297-18307316 Msa0761230:intron 15.0%
!! GAGAGATATAATTATTATAA+AGG + chr5_2:18307662-18307681 None:intergenic 15.0%
!! AAATAAAATCAGAAAATCAA+TGG + chr5_2:18307982-18308001 None:intergenic 15.0%
!! AGGTTTATCATATAAAAAAT+AGG - chr5_2:18308782-18308801 Msa0761230:intron 15.0%
!! CTCCATAAATATAATAAATA+TGG + chr5_2:18310038-18310057 None:intergenic 15.0%
!!! ATTGGATTTTATTTTTAGAT+TGG - chr5_2:18310379-18310398 Msa0761230:intron 15.0%
!!! ATTTTACAATATAATGATGA+TGG - chr5_2:18310990-18311009 Msa0761230:intron 15.0%
!!! GTTTAATTTATTGAATTTTG+TGG - chr5_2:18311088-18311107 Msa0761230:intron 15.0%
!!! GTTGTTTTTTAAATATTAGT+TGG - chr5_2:18311440-18311459 Msa0761230:intron 15.0%
!!! TTATGAAAGTACAAAATAAA+AGG + chr5_2:18311506-18311525 None:intergenic 15.0%
!!! AATAATTGTACTAGTATTTT+TGG + chr5_2:18311698-18311717 None:intergenic 15.0%
!! ATAATCTCTTTATTAATATG+TGG - chr5_2:18311924-18311943 Msa0761230:intron 15.0%
!!! TTTTTTTATATATCCACTTA+GGG + chr5_2:18312940-18312959 None:intergenic 15.0%
!! ATTACAATAATTACATGAAA+TGG + chr5_2:18313523-18313542 None:intergenic 15.0%
!! AAAATATTAAGCAATGGTAT+TGG + chr5_2:18302774-18302793 None:intergenic 20.0%
!! ATTTGGAAAATATTAAGCAA+TGG + chr5_2:18302780-18302799 None:intergenic 20.0%
!! ATCTAATAATAATATCATCG+TGG - chr5_2:18302940-18302959 Msa0761230:three_prime_UTR 20.0%
!! GATAAACTTGATAAATTATG+TGG - chr5_2:18303000-18303019 Msa0761230:three_prime_UTR 20.0%
!!! CTAATTCATTTTTACATTTC+AGG - chr5_2:18303192-18303211 Msa0761230:exon 20.0%
!!! AATTCATTTTTACATTTCAG+GGG - chr5_2:18303194-18303213 Msa0761230:exon 20.0%
!!! TTGTTTTCTCAAATTATTAC+TGG - chr5_2:18303395-18303414 Msa0761230:intron 20.0%
!! TTTGGTTAATGTAATCATAA+AGG - chr5_2:18304142-18304161 Msa0761230:intron 20.0%
!! TGATCAAATAAACTCATAAA+TGG + chr5_2:18304347-18304366 None:intergenic 20.0%
!!! ATTTTCAGAATGAAAAATAG+TGG + chr5_2:18304378-18304397 None:intergenic 20.0%
!! ATACTTAAAATCACATGAAT+TGG - chr5_2:18304478-18304497 Msa0761230:intron 20.0%
!!! CTTTATAGTGTTTTTATTGA+TGG - chr5_2:18304976-18304995 Msa0761230:intron 20.0%
!!! TTTGTTAAGATGGTTTTTAT+CGG - chr5_2:18305101-18305120 Msa0761230:intron 20.0%
!!! ATTGTTTTTAGTAAATGTGT+GGG + chr5_2:18305280-18305299 None:intergenic 20.0%
!! CAGATACTAAAAAATTATGA+GGG + chr5_2:18305514-18305533 None:intergenic 20.0%
!! ACAGATACTAAAAAATTATG+AGG + chr5_2:18305515-18305534 None:intergenic 20.0%
!!! ACAATTTCACTTTTAGAAAA+AGG + chr5_2:18305920-18305939 None:intergenic 20.0%
!! TATAAGTGAATGAAAAAGAA+AGG - chr5_2:18306055-18306074 Msa0761230:intron 20.0%
!!! TGAACCATTTTAAAAATAGT+TGG - chr5_2:18306091-18306110 Msa0761230:CDS 20.0%
!!! GAACCATTTTAAAAATAGTT+GGG - chr5_2:18306092-18306111 Msa0761230:CDS 20.0%
!!! TAACCCAACTATTTTTAAAA+TGG + chr5_2:18306098-18306117 None:intergenic 20.0%
!! GAAGGATTAACTATATATAA+TGG - chr5_2:18306119-18306138 Msa0761230:CDS 20.0%
!!! TTATCCATGCTTTTAATTTA+GGG - chr5_2:18306166-18306185 Msa0761230:CDS 20.0%
!!! CAACTTTTTGAGAAATAAAT+TGG - chr5_2:18306266-18306285 Msa0761230:intron 20.0%
!!! TAATACATAATTTCTCCTTT+TGG - chr5_2:18306298-18306317 Msa0761230:intron 20.0%
!! CTTTATTAAAAAACCCAATA+TGG + chr5_2:18306606-18306625 None:intergenic 20.0%
!! ATTATCTGATTTCTGATAAT+AGG - chr5_2:18306712-18306731 Msa0761230:CDS 20.0%
!! ATTCAAATAGTATATGAACA+GGG + chr5_2:18307008-18307027 None:intergenic 20.0%
!! TATTCAAATAGTATATGAAC+AGG + chr5_2:18307009-18307028 None:intergenic 20.0%
!! CAAAAAACAATGTGAAAAAT+AGG - chr5_2:18307029-18307048 Msa0761230:intron 20.0%
!! AAAAACAATGTGAAAAATAG+GGG - chr5_2:18307031-18307050 Msa0761230:intron 20.0%
!!! TGGTTTCTTTTCTTATAAAA+AGG + chr5_2:18307169-18307188 None:intergenic 20.0%
!!! TACTTCACAAATTTTTATGA+GGG + chr5_2:18307255-18307274 None:intergenic 20.0%
!!! ATACTTCACAAATTTTTATG+AGG + chr5_2:18307256-18307275 None:intergenic 20.0%
!!! GTTTGTCTTTTTAATATTAG+TGG + chr5_2:18307288-18307307 None:intergenic 20.0%
!!! TGTGACTTTTTCTTATATAT+TGG - chr5_2:18307359-18307378 Msa0761230:CDS 20.0%
!!! AATTTTCTTATAAATAGGAC+CGG - chr5_2:18307400-18307419 Msa0761230:CDS 20.0%
!! TGTTGTCTTCATATAAAAAT+AGG - chr5_2:18307481-18307500 Msa0761230:intron 20.0%
!!! GAATTTTTTTTTGTTGATGT+AGG - chr5_2:18307561-18307580 Msa0761230:intron 20.0%
!!! ATATCTCTCATAGTTTTTAA+AGG - chr5_2:18307673-18307692 Msa0761230:CDS 20.0%
!!! AAAAATTTACTTTGGTGTTA+GGG + chr5_2:18308040-18308059 None:intergenic 20.0%
!!! TAAAAATTTACTTTGGTGTT+AGG + chr5_2:18308041-18308060 None:intergenic 20.0%
!! GCATGTTTAAAAATTTACTT+TGG + chr5_2:18308048-18308067 None:intergenic 20.0%
!!! TTTTAAACATGCACAAAAAA+TGG - chr5_2:18308056-18308075 Msa0761230:intron 20.0%
!! TTTAAACATGCACAAAAAAT+GGG - chr5_2:18308057-18308076 Msa0761230:intron 20.0%
!!! TAATGTTTTGATTAATCTCT+TGG + chr5_2:18308569-18308588 None:intergenic 20.0%
!! AATAATTCAATTCTCAAGTA+AGG + chr5_2:18308900-18308919 None:intergenic 20.0%
!! AGGATATAGTATTTATCATA+TGG - chr5_2:18308980-18308999 Msa0761230:intron 20.0%
!! TGATACGATAAAATTAATGA+AGG + chr5_2:18309020-18309039 None:intergenic 20.0%
!! AATAAGTTACTGGATAAATA+AGG - chr5_2:18309171-18309190 Msa0761230:intron 20.0%
!! ATAAGTTACTGGATAAATAA+GGG - chr5_2:18309172-18309191 Msa0761230:intron 20.0%
!! ATAGAATATGATTACACAAT+AGG + chr5_2:18309279-18309298 None:intergenic 20.0%
!! AAAAAAGACCATTTAGATTA+AGG + chr5_2:18309388-18309407 None:intergenic 20.0%
!!! CTTTTTTTTATTCGAAAGTT+TGG - chr5_2:18309401-18309420 Msa0761230:intron 20.0%
!!! TTATTGTTACCTTTTTACTT+TGG - chr5_2:18309522-18309541 Msa0761230:intron 20.0%
!! TTATTTATAGTGCATGTAAA+TGG + chr5_2:18309730-18309749 None:intergenic 20.0%
!!! TAAATAATTTTCCTGTATCT+AGG + chr5_2:18309853-18309872 None:intergenic 20.0%
!! CATGAACGATTAAAAAAATA+AGG + chr5_2:18310079-18310098 None:intergenic 20.0%
!!! CTTATTTTTTTAATCGTTCA+TGG - chr5_2:18310077-18310096 Msa0761230:intron 20.0%
!! TTTCATACAAATAAAAAAGC+AGG + chr5_2:18310338-18310357 None:intergenic 20.0%
!! CATTAACTAAATCCAAATTA+AGG + chr5_2:18310534-18310553 None:intergenic 20.0%
!! CTCAAAAGAAATTATATACA+GGG + chr5_2:18310612-18310631 None:intergenic 20.0%
!!! CTGTATATAATTTCTTTTGA+GGG - chr5_2:18310611-18310630 Msa0761230:intron 20.0%
!!! TGTATATAATTTCTTTTGAG+GGG - chr5_2:18310612-18310631 Msa0761230:intron 20.0%
!! AAACTAAAAATTAGACTCTA+TGG + chr5_2:18310729-18310748 None:intergenic 20.0%
!! TACTTTCATAATTTAAGTCA+TGG - chr5_2:18311515-18311534 Msa0761230:intron 20.0%
!!! GTTTTTGCTTGATTTTTTTT+TGG - chr5_2:18311638-18311657 Msa0761230:CDS 20.0%
!! TAGTACAATTATTTGAAAAC+AGG - chr5_2:18311705-18311724 Msa0761230:CDS 20.0%
!! ATCAATTGATATTATCTTTC+TGG - chr5_2:18311888-18311907 Msa0761230:intron 20.0%
!! AACAAAAATATCAGGAAATT+AGG + chr5_2:18312111-18312130 None:intergenic 20.0%
!! TCTTGCAATATATCTTTAAA+GGG + chr5_2:18312423-18312442 None:intergenic 20.0%
!! ATCTTGCAATATATCTTTAA+AGG + chr5_2:18312424-18312443 None:intergenic 20.0%
!! GCATAAAATTAAAACAAAGA+AGG + chr5_2:18312556-18312575 None:intergenic 20.0%
!! TAAAGAAAGAAATGAATAAC+TGG + chr5_2:18312723-18312742 None:intergenic 20.0%
!!! TTTTTTATATATCCACTTAG+GGG + chr5_2:18312939-18312958 None:intergenic 20.0%
!!! CTTTTTTTATATATCCACTT+AGG + chr5_2:18312941-18312960 None:intergenic 20.0%
!! CTTAATCATATAAATTCTAC+AGG - chr5_2:18313009-18313028 Msa0761230:intron 20.0%
!! ATAATCAGTCATATAGAAAA+TGG - chr5_2:18313261-18313280 Msa0761230:CDS 20.0%
! AAATAAGTATGATGACAAAC+AGG + chr5_2:18303160-18303179 None:intergenic 25.0%
!!! ATTCATTTTTACATTTCAGG+GGG - chr5_2:18303195-18303214 Msa0761230:exon 25.0%
!!! AACTTGAGTAATTTTCAAGA+TGG - chr5_2:18303224-18303243 Msa0761230:CDS 25.0%
!!! GTGTCTATATGATATTTTGA+TGG - chr5_2:18303495-18303514 Msa0761230:intron 25.0%
! ATAAAACATTAAAACAACCC+CGG + chr5_2:18303657-18303676 None:intergenic 25.0%
! CCATCTAAACATGATATAAT+GGG + chr5_2:18303820-18303839 None:intergenic 25.0%
! TCCATCTAAACATGATATAA+TGG + chr5_2:18303821-18303840 None:intergenic 25.0%
! ATTGACTATTTATTCTCATG+TGG - chr5_2:18304235-18304254 Msa0761230:intron 25.0%
! TGTGGTTTATCTTATCTTTA+AGG - chr5_2:18304253-18304272 Msa0761230:intron 25.0%
! ATAAACTCATAAATGGTGAT+AGG + chr5_2:18304340-18304359 None:intergenic 25.0%
!! AAGCTTTGTCTTAGAATATA+TGG + chr5_2:18304520-18304539 None:intergenic 25.0%
! CTAAAATATTCCCTTACATT+CGG + chr5_2:18304729-18304748 None:intergenic 25.0%
!!! AGTAACATTTTAACGAATTC+TGG + chr5_2:18304930-18304949 None:intergenic 25.0%
!!! ATGGTTTTTATCGGTTATTT+TGG - chr5_2:18305110-18305129 Msa0761230:intron 25.0%
!!! TTTTTATCGGTTATTTTGGT+TGG - chr5_2:18305114-18305133 Msa0761230:intron 25.0%
! AATGAGACAACACAATTATT+AGG + chr5_2:18305194-18305213 None:intergenic 25.0%
!!! CATTGTTTTTAGTAAATGTG+TGG + chr5_2:18305281-18305300 None:intergenic 25.0%
! ACTAAAAACAATGAGATGTT+TGG - chr5_2:18305288-18305307 Msa0761230:intron 25.0%
! CTAAAAACAATGAGATGTTT+GGG - chr5_2:18305289-18305308 Msa0761230:intron 25.0%
!! CTATCTTTTATATCACAGTT+GGG + chr5_2:18305542-18305561 None:intergenic 25.0%
!! TCTATCTTTTATATCACAGT+TGG + chr5_2:18305543-18305562 None:intergenic 25.0%
! ACTGTGATATAAAAGATAGA+TGG - chr5_2:18305543-18305562 Msa0761230:intron 25.0%
! CTGTGATATAAAAGATAGAT+GGG - chr5_2:18305544-18305563 Msa0761230:intron 25.0%
!!! TTTCTAGAACAGTTGAATTT+GGG + chr5_2:18306010-18306029 None:intergenic 25.0%
!!! ATTTCTAGAACAGTTGAATT+TGG + chr5_2:18306011-18306030 None:intergenic 25.0%
! TAAAAATAGTTGGGTTATGA+AGG - chr5_2:18306101-18306120 Msa0761230:CDS 25.0%
!!! GTTATCCATGCTTTTAATTT+AGG - chr5_2:18306165-18306184 Msa0761230:CDS 25.0%
!! TCTGAAAACAGTTTTACATA+GGG + chr5_2:18306372-18306391 None:intergenic 25.0%
!!! TTCTGAAAACAGTTTTACAT+AGG + chr5_2:18306373-18306392 None:intergenic 25.0%
!! TTTTCCAGTAGCTTATATAA+GGG + chr5_2:18306411-18306430 None:intergenic 25.0%
!! ATTTTCCAGTAGCTTATATA+AGG + chr5_2:18306412-18306431 None:intergenic 25.0%
! TCAAATAATGTTGTATAGGT+TGG - chr5_2:18306521-18306540 Msa0761230:intron 25.0%
! ACTTCTCAAACAGAATAAAA+TGG + chr5_2:18306649-18306668 None:intergenic 25.0%
! AGAAGGATTAGAAGAATTAA+GGG + chr5_2:18306682-18306701 None:intergenic 25.0%
! AAGAAGGATTAGAAGAATTA+AGG + chr5_2:18306683-18306702 None:intergenic 25.0%
!! TGATTTCTGATAATAGGTTT+TGG - chr5_2:18306718-18306737 Msa0761230:CDS 25.0%
!!! TTCTGAAACATTTGTTTCAT+TGG + chr5_2:18306773-18306792 None:intergenic 25.0%
! GAAACAAATGTTTCAGAAAA+TGG - chr5_2:18306775-18306794 Msa0761230:intron 25.0%
!! TACATCTTTTGTATACTACT+AGG - chr5_2:18306807-18306826 Msa0761230:intron 25.0%
!! ACATCTTTTGTATACTACTA+GGG - chr5_2:18306808-18306827 Msa0761230:intron 25.0%
! TTTATGCTCTATACTTTCTT+AGG - chr5_2:18306834-18306853 Msa0761230:intron 25.0%
!!! AGGTATCTTTCTGAAATTTA+TGG - chr5_2:18306854-18306873 Msa0761230:intron 25.0%
!!! GGTATCTTTCTGAAATTTAT+GGG - chr5_2:18306855-18306874 Msa0761230:intron 25.0%
! AATATGAAACAGTGAAATCT+AGG + chr5_2:18306943-18306962 None:intergenic 25.0%
! TTCAAATAGTATATGAACAG+GGG + chr5_2:18307007-18307026 None:intergenic 25.0%
! AAAACAATGTGAAAAATAGG+GGG - chr5_2:18307032-18307051 Msa0761230:intron 25.0%
!! TCTTTTCTTATAAAAAGGAC+CGG + chr5_2:18307164-18307183 None:intergenic 25.0%
!!! GTCTTGGTTTTAATGATTTT+TGG + chr5_2:18307189-18307208 None:intergenic 25.0%
!! AGAAAAAGTCACAACTTTTA+AGG + chr5_2:18307352-18307371 None:intergenic 25.0%
!!! AACATTTTACCTTTTTTTGC+TGG - chr5_2:18307506-18307525 Msa0761230:intron 25.0%
! TGAATGATTTCCAAACAATA+TGG + chr5_2:18307724-18307743 None:intergenic 25.0%
! AAAAAAACAGACCATACAAA+AGG + chr5_2:18307842-18307861 None:intergenic 25.0%
!!! ATTTTTATGCTCTAAGTTAG+AGG - chr5_2:18307878-18307897 Msa0761230:intron 25.0%
! GGAAAACAAAAATGAAGTTA+GGG - chr5_2:18308078-18308097 Msa0761230:intron 25.0%
! GAAAACAAAAATGAAGTTAG+GGG - chr5_2:18308079-18308098 Msa0761230:intron 25.0%
!! TACAGATTGATAATCTTATC+AGG - chr5_2:18308152-18308171 Msa0761230:intron 25.0%
! CATTTGTGATTAATATGCTA+TGG + chr5_2:18308371-18308390 None:intergenic 25.0%
!! AGAAAAGTTCTTTGAAAGTA+GGG + chr5_2:18308412-18308431 None:intergenic 25.0%
!! AAGAAAAGTTCTTTGAAAGT+AGG + chr5_2:18308413-18308432 None:intergenic 25.0%
! GTGTATGTTATAAATGTTCT+AGG - chr5_2:18308698-18308717 Msa0761230:intron 25.0%
!! ATAGCATACAATTTTGTCAT+TGG - chr5_2:18308930-18308949 Msa0761230:intron 25.0%
! GTTAATAGAGAATAAGTTAC+TGG - chr5_2:18309161-18309180 Msa0761230:intron 25.0%
!! AATGTCAATAGGCATTTTAT+TGG - chr5_2:18309206-18309225 Msa0761230:intron 25.0%
!! ATGTCAATAGGCATTTTATT+GGG - chr5_2:18309207-18309226 Msa0761230:intron 25.0%
! GATAGATAAATCAACTACAT+TGG + chr5_2:18309436-18309455 None:intergenic 25.0%
! CTGTCAAAAAAAAATTGTCA+AGG + chr5_2:18309578-18309597 None:intergenic 25.0%
!! CTAGGTTTTCAATCAAATAA+CGG + chr5_2:18309786-18309805 None:intergenic 25.0%
! TGTACAATGACATTAAATTC+AGG + chr5_2:18309900-18309919 None:intergenic 25.0%
! ATTTAATGTCATTGTACACA+AGG - chr5_2:18309902-18309921 Msa0761230:intron 25.0%
! AAAAATAAGGTCAAACTCAT+TGG + chr5_2:18310066-18310085 None:intergenic 25.0%
!! GTTGATTCATAAAATTACCT+GGG + chr5_2:18310278-18310297 None:intergenic 25.0%
!! AGTTGATTCATAAAATTACC+TGG + chr5_2:18310279-18310298 None:intergenic 25.0%
!! TAATTTTATGAATCAACTGC+TGG - chr5_2:18310281-18310300 Msa0761230:intron 25.0%
!! GTATGAAAGTTGCATTTTAT+TGG - chr5_2:18310350-18310369 Msa0761230:intron 25.0%
!!! GCATTTTATTGGTTTTGTAT+TGG - chr5_2:18310361-18310380 Msa0761230:intron 25.0%
! TTATTTAGTCTATTCATGCA+AGG + chr5_2:18310450-18310469 None:intergenic 25.0%
! CCTCAAAAGAAATTATATAC+AGG + chr5_2:18310613-18310632 None:intergenic 25.0%
!! CCTGTATATAATTTCTTTTG+AGG - chr5_2:18310610-18310629 Msa0761230:intron 25.0%
! ATAATTGTGCTATAGATCTA+TGG + chr5_2:18310645-18310664 None:intergenic 25.0%
! TCTATAGCACAATTATATCT+TGG - chr5_2:18310649-18310668 Msa0761230:intron 25.0%
!! TTTATTGAATTTTGTGGTAC+AGG - chr5_2:18311094-18311113 Msa0761230:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr5_2:18311168-18311187 Msa0761230:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG + chr5_2:18311304-18311323 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr5_2:18311311-18311330 Msa0761230:CDS 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr5_2:18311351-18311370 None:intergenic 25.0%
! TCATAATTTAAGTCATGGTT+TGG - chr5_2:18311520-18311539 Msa0761230:intron 25.0%
!!! TTTTTTTTTGGTTGTACTGA+TGG - chr5_2:18311650-18311669 Msa0761230:CDS 25.0%
! TGTATGACAACAAAAATATC+AGG + chr5_2:18312119-18312138 None:intergenic 25.0%
! CAAGATGTTTGAAAAATTAG+TGG - chr5_2:18312438-18312457 Msa0761230:intron 25.0%
! ATTAAAACAAAGAAGGCAAA+AGG + chr5_2:18312549-18312568 None:intergenic 25.0%
! ATTTCTTTCTTTATATCACG+AGG - chr5_2:18312730-18312749 Msa0761230:intron 25.0%
! TTTCTTTCTTTATATCACGA+GGG - chr5_2:18312731-18312750 Msa0761230:intron 25.0%
!!! AAAGTTGATATATACATACC+TGG - chr5_2:18312972-18312991 Msa0761230:intron 25.0%
! TAAGTAACTACAAATAATCC+AGG + chr5_2:18312993-18313012 None:intergenic 25.0%
!! ATAAAAGTGCATGAGAAATT+AGG + chr5_2:18313157-18313176 None:intergenic 25.0%
!! TTTGATGTTTGTTGGTAAAA+AGG - chr5_2:18313295-18313314 Msa0761230:CDS 25.0%
! TTATCCAATATCATGATAAG+TGG + chr5_2:18313407-18313426 None:intergenic 25.0%
!! ATGTAAGTATTGTAATTCTC+AGG - chr5_2:18313456-18313475 Msa0761230:intron 25.0%
!!! TAATTAAGTACTGACTTCAA+AGG - chr5_2:18313539-18313558 Msa0761230:five_prime_UTR 25.0%
! AAGAAGAAGAAGAACCTTTT+GGG + chr5_2:18302869-18302888 None:intergenic 30.0%
! AAAGAAGAAGAAGAACCTTT+TGG + chr5_2:18302870-18302889 None:intergenic 30.0%
AATAATATCATCGTGGTGAA+TGG - chr5_2:18302947-18302966 Msa0761230:three_prime_UTR 30.0%
TTGATAAATTATGTGGATCG+AGG - chr5_2:18303007-18303026 Msa0761230:three_prime_UTR 30.0%
!! TTCATTTTTACATTTCAGGG+GGG - chr5_2:18303196-18303215 Msa0761230:exon 30.0%
!! AGTTTTGTCATCTGCTTTTA+TGG - chr5_2:18303247-18303266 Msa0761230:CDS 30.0%
TTAGCAAGAGAAGCAAAAAT+TGG + chr5_2:18303293-18303312 None:intergenic 30.0%
! TTTTTGCTTCTCTTGCTAAA+AGG - chr5_2:18303294-18303313 Msa0761230:CDS 30.0%
TCTCAAATTATTACTGGTGT+CGG - chr5_2:18303401-18303420 Msa0761230:intron 30.0%
ATATCAAAACTGTCAAAAGC+AGG + chr5_2:18303451-18303470 None:intergenic 30.0%
!! TTTTCGTTTTGGTGAATTGA+AGG + chr5_2:18303610-18303629 None:intergenic 30.0%
! TTCTTCTGGTATTTTCGTTT+TGG + chr5_2:18303621-18303640 None:intergenic 30.0%
CACATGTAAGAGAAATTCTT+AGG + chr5_2:18303738-18303757 None:intergenic 30.0%
CCCATTATATCATGTTTAGA+TGG - chr5_2:18303817-18303836 Msa0761230:intron 30.0%
CAATATCCAATATGTTGTTG+AGG - chr5_2:18303842-18303861 Msa0761230:intron 30.0%
AGTATAGACCTTAGATTCTT+TGG + chr5_2:18303979-18303998 None:intergenic 30.0%
! AAGAATCTAAGGTCTATACT+TGG - chr5_2:18303979-18303998 Msa0761230:intron 30.0%
! AGAATCTAAGGTCTATACTT+GGG - chr5_2:18303980-18303999 Msa0761230:intron 30.0%
ATTACATTAACCAAACTGCA+AGG + chr5_2:18304137-18304156 None:intergenic 30.0%
GTAAAATCATCACAGAAACA+AGG + chr5_2:18304309-18304328 None:intergenic 30.0%
TCTGAAAATCTAGACATTGA+AGG - chr5_2:18304389-18304408 Msa0761230:intron 30.0%
ATTCAATTAGAGGGAAAACA+TGG + chr5_2:18304578-18304597 None:intergenic 30.0%
! ATGTTTTCCCTCTAATTGAA+TGG - chr5_2:18304577-18304596 Msa0761230:intron 30.0%
TTAGTGCTTTCAACATTTCA+AGG - chr5_2:18304745-18304764 Msa0761230:intron 30.0%
!! ACATTTTAACGAATTCTGGA+GGG + chr5_2:18304926-18304945 None:intergenic 30.0%
!! AACATTTTAACGAATTCTGG+AGG + chr5_2:18304927-18304946 None:intergenic 30.0%
!! ACAATCTAGCTTTGTTAAGA+TGG - chr5_2:18305091-18305110 Msa0761230:intron 30.0%
GGTTTAATAGAACATTGCTT+AGG + chr5_2:18305406-18305425 None:intergenic 30.0%
CAGATATGAAATATGGACAA+TGG + chr5_2:18305470-18305489 None:intergenic 30.0%
! ATGAGGGATTTTCTTTTGTT+TGG + chr5_2:18305498-18305517 None:intergenic 30.0%
!! AAGGGGATTATTTTTCACTA+GGG + chr5_2:18305624-18305643 None:intergenic 30.0%
!! AAAGGGGATTATTTTTCACT+AGG + chr5_2:18305625-18305644 None:intergenic 30.0%
!! CTTTGAGATTTACTTCATAC+TGG - chr5_2:18305660-18305679 Msa0761230:intron 30.0%
! TCAAAGAGCTACTTCTTTTT+AGG + chr5_2:18305688-18305707 None:intergenic 30.0%
TTCCAATTTATTTGGGTCAT+AGG + chr5_2:18305717-18305736 None:intergenic 30.0%
GAGGACATTCCAATTTATTT+GGG + chr5_2:18305724-18305743 None:intergenic 30.0%
ACTAATGTCAATAAGCAGTA+TGG + chr5_2:18305818-18305837 None:intergenic 30.0%
! AGCTTTATAGACATTACTCT+TGG + chr5_2:18305847-18305866 None:intergenic 30.0%
!! TCACTTTTAGAAAAAGGAAG+AGG + chr5_2:18305914-18305933 None:intergenic 30.0%
!! CAACTGTTCTAGAAATTGAA+TGG - chr5_2:18306015-18306034 Msa0761230:intron 30.0%
ATGACCCTAAATTAAAAGCA+TGG + chr5_2:18306173-18306192 None:intergenic 30.0%
AGGATTCTACAAATACCAAA+AGG + chr5_2:18306316-18306335 None:intergenic 30.0%
ATTACCCTTATATAAGCTAC+TGG - chr5_2:18306404-18306423 Msa0761230:intron 30.0%
AATAATAAACGAACTGAGCA+TGG + chr5_2:18306449-18306468 None:intergenic 30.0%
AAAAAACCCAATATGGGAAA+AGG + chr5_2:18306599-18306618 None:intergenic 30.0%
AGATAATGAGTTGCTAAAGA+AGG + chr5_2:18306699-18306718 None:intergenic 30.0%
ACAAATGTTTCAGAAAATGG+AGG - chr5_2:18306778-18306797 Msa0761230:intron 30.0%
TTTATGGGAGACATAAATGT+TGG - chr5_2:18306870-18306889 Msa0761230:intron 30.0%
TTATGGGAGACATAAATGTT+GGG - chr5_2:18306871-18306890 Msa0761230:intron 30.0%
!! AATTTTCTCACAAGCTTGTT+TGG + chr5_2:18307101-18307120 None:intergenic 30.0%
AAGCTTGTGAGAAAATTCAA+AGG - chr5_2:18307104-18307123 Msa0761230:intron 30.0%
TAGATAAATATTACTCCCTC+CGG - chr5_2:18307142-18307161 Msa0761230:intron 30.0%
AAAACCAAGACAATCATTAG+TGG - chr5_2:18307198-18307217 Msa0761230:intron 30.0%
TATTTCAAAATTACTCCCTC+CGG + chr5_2:18307422-18307441 None:intergenic 30.0%
!! ATTTTACCTTTTTTTGCTGG+TGG - chr5_2:18307509-18307528 Msa0761230:intron 30.0%
!! TTTTACCTTTTTTTGCTGGT+GGG - chr5_2:18307510-18307529 Msa0761230:intron 30.0%
CAACTAGTAACAGATACATA+TGG + chr5_2:18307539-18307558 None:intergenic 30.0%
! TATAAAGGCAATCCATTTTC+TGG + chr5_2:18307647-18307666 None:intergenic 30.0%
AAAGGAAACAAAGGTAAGAT+GGG + chr5_2:18307824-18307843 None:intergenic 30.0%
AAAAGGAAACAAAGGTAAGA+TGG + chr5_2:18307825-18307844 None:intergenic 30.0%
!! TACCTTTGTTTCCTTTTGTA+TGG - chr5_2:18307828-18307847 Msa0761230:intron 30.0%
!!! TATGGTCTGTTTTTTTCTTG+TGG - chr5_2:18307846-18307865 Msa0761230:intron 30.0%
TTTCCCTTGTATATAGATGA+TGG - chr5_2:18307901-18307920 Msa0761230:intron 30.0%
ATGCCATCATCTATATACAA+GGG + chr5_2:18307907-18307926 None:intergenic 30.0%
GGGAAAACAAAAATGAAGTT+AGG - chr5_2:18308077-18308096 Msa0761230:intron 30.0%
!! GTCATGTTTCATTTTGCTAT+TGG - chr5_2:18308301-18308320 Msa0761230:intron 30.0%
! ATTTACTCGAACTTTAGAAG+GGG + chr5_2:18308507-18308526 None:intergenic 30.0%
! CATTTACTCGAACTTTAGAA+GGG + chr5_2:18308508-18308527 None:intergenic 30.0%
ACATTTACTCGAACTTTAGA+AGG + chr5_2:18308509-18308528 None:intergenic 30.0%
CTAAAGTTCGAGTAAATGTT+AGG - chr5_2:18308510-18308529 Msa0761230:intron 30.0%
AGAAGAAAACAAGATTGCTA+AGG + chr5_2:18308540-18308559 None:intergenic 30.0%
AAAGTAATTATCAGCAGGTA+AGG + chr5_2:18308738-18308757 None:intergenic 30.0%
AGAGAAAAGTAATTATCAGC+AGG + chr5_2:18308743-18308762 None:intergenic 30.0%
!! ACTTTTCTCTCATTTTTCTC+TGG - chr5_2:18308753-18308772 Msa0761230:intron 30.0%
TTGAGAATTGAATTATTGCC+AGG - chr5_2:18308903-18308922 Msa0761230:intron 30.0%
TGAGAATTGAATTATTGCCA+GGG - chr5_2:18308904-18308923 Msa0761230:intron 30.0%
AAATTGTATGCTATATACCC+TGG + chr5_2:18308924-18308943 None:intergenic 30.0%
TAAATACTATATCCTGCCTT+CGG + chr5_2:18308975-18308994 None:intergenic 30.0%
! ATGTGTAGCAGTTATGTTTT+AGG - chr5_2:18309136-18309155 Msa0761230:intron 30.0%
! TGTCAATAGGCATTTTATTG+GGG - chr5_2:18309208-18309227 Msa0761230:intron 30.0%
!!! TTTTATTGGGGATTGGTTAT+TGG - chr5_2:18309220-18309239 Msa0761230:intron 30.0%
TTCTATTCCGTTTCTATGTT+TGG - chr5_2:18309318-18309337 Msa0761230:intron 30.0%
ACAATACTTGTGATAGAAAC+CGG + chr5_2:18309346-18309365 None:intergenic 30.0%
TTGTGAGAAATTAACCAAGA+AGG - chr5_2:18309362-18309381 Msa0761230:intron 30.0%
GGAATTGTACCAAAGTAAAA+AGG + chr5_2:18309534-18309553 None:intergenic 30.0%
! GAGGTATTACAATTGTTTGT+GGG - chr5_2:18309620-18309639 Msa0761230:intron 30.0%
! ACAATTGTTTGTGGGATTTT+TGG - chr5_2:18309628-18309647 Msa0761230:intron 30.0%
! CAATTGTTTGTGGGATTTTT+GGG - chr5_2:18309629-18309648 Msa0761230:intron 30.0%
AACAATCTCAAATGCTTTCA+AGG - chr5_2:18309690-18309709 Msa0761230:intron 30.0%
AAATGCTTTCAAGGTAAACA+TGG - chr5_2:18309699-18309718 Msa0761230:intron 30.0%
!! AAATAACGGACAAAAAACAG+GGG + chr5_2:18309772-18309791 None:intergenic 30.0%
!! CAAATAACGGACAAAAAACA+GGG + chr5_2:18309773-18309792 None:intergenic 30.0%
!! TCAAATAACGGACAAAAAAC+AGG + chr5_2:18309774-18309793 None:intergenic 30.0%
CGTTATTTGATTGAAAACCT+AGG - chr5_2:18309784-18309803 Msa0761230:CDS 30.0%
! ATATCTTTTGACCTAGATAC+AGG - chr5_2:18309839-18309858 Msa0761230:intron 30.0%
GAAATCATGCATAGTATTAC+TGG + chr5_2:18309878-18309897 None:intergenic 30.0%
TGTTCAGTTCATTTCTTCTT+TGG - chr5_2:18310116-18310135 Msa0761230:intron 30.0%
AGAATCTGCAATTGTAACAA+GGG + chr5_2:18310145-18310164 None:intergenic 30.0%
AAGAATCTGCAATTGTAACA+AGG + chr5_2:18310146-18310165 None:intergenic 30.0%
TTACAATTGCAGATTCTTTC+TGG - chr5_2:18310148-18310167 Msa0761230:intron 30.0%
! GTTCATCCTTTTCACTTATT+GGG - chr5_2:18310401-18310420 Msa0761230:intron 30.0%
! AATAGATACACAGACTTGTT+TGG + chr5_2:18310488-18310507 None:intergenic 30.0%
CTAAATCCAAATTAAGGCAA+TGG + chr5_2:18310528-18310547 None:intergenic 30.0%
TAAAAACTAAAAACACCCTC+AGG + chr5_2:18310807-18310826 None:intergenic 30.0%
CATTTACTCTAGACATAACA+AGG + chr5_2:18310956-18310975 None:intergenic 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr5_2:18311164-18311183 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG + chr5_2:18311234-18311253 None:intergenic 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - chr5_2:18311235-18311254 Msa0761230:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr5_2:18311294-18311313 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr5_2:18311316-18311335 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG - chr5_2:18311355-18311374 Msa0761230:intron 30.0%
ATTAGTTGGATATCATAGCA+CGG - chr5_2:18311454-18311473 Msa0761230:intron 30.0%
AAACAGGAAATAAAGAGAGA+AGG - chr5_2:18311721-18311740 Msa0761230:intron 30.0%
AACTATCATCATGCCATTAA+AGG + chr5_2:18311843-18311862 None:intergenic 30.0%
!!! TCAAACTTGGTTTTACACAA+CGG + chr5_2:18311999-18312018 None:intergenic 30.0%
GATTACAGACCATACTAAAA+AGG + chr5_2:18312209-18312228 None:intergenic 30.0%
CATACAAACGTCAATAGAAA+AGG + chr5_2:18312246-18312265 None:intergenic 30.0%
TTGACGTTTGTATGTTCAAT+CGG - chr5_2:18312252-18312271 Msa0761230:intron 30.0%
AAGTTAAGTAGACAATGACA+CGG + chr5_2:18312338-18312357 None:intergenic 30.0%
! TTCTGTTTTGCATATTGATG+TGG - chr5_2:18312477-18312496 Msa0761230:intron 30.0%
TTCTTTCTTTATATCACGAG+GGG - chr5_2:18312732-18312751 Msa0761230:intron 30.0%
GAGCTGTAAGTTATTATTGA+AGG - chr5_2:18312754-18312773 Msa0761230:intron 30.0%
CTACTAGAACACATTAAGTT+TGG + chr5_2:18312848-18312867 None:intergenic 30.0%
!! CATATCATCGCTTTTCAAAA+AGG + chr5_2:18313037-18313056 None:intergenic 30.0%
!! ATTTGCAAATGAAAGTATCC+TGG - chr5_2:18313196-18313215 Msa0761230:intron 30.0%
ATCAGTCATATAGAAAATGG+TGG - chr5_2:18313264-18313283 Msa0761230:CDS 30.0%
TCAGTCATATAGAAAATGGT+GGG - chr5_2:18313265-18313284 Msa0761230:CDS 30.0%
TAGCATAAACTTTACATGTC+TGG - chr5_2:18313321-18313340 Msa0761230:CDS 30.0%
AGTTCCACTTATCATGATAT+TGG - chr5_2:18313400-18313419 Msa0761230:intron 30.0%
AACAATTTGATCATGATGAG+TGG + chr5_2:18313430-18313449 None:intergenic 30.0%
! ATTTGGATACCATTTTCGCA+GGG + chr5_2:18302814-18302833 None:intergenic 35.0%
! AGAAGAAGAAGAACCTTTTG+GGG + chr5_2:18302868-18302887 None:intergenic 35.0%
! ATAGCTAGCAATGGTGTTAA+TGG - chr5_2:18303034-18303053 Msa0761230:three_prime_UTR 35.0%
!! TTGTCATCTGCTTTTATGGT+TGG - chr5_2:18303251-18303270 Msa0761230:CDS 35.0%
TTGAACGTAATCACATGTGT+TGG + chr5_2:18303370-18303389 None:intergenic 35.0%
TCTCTTACATGTGTGATTTG+TGG - chr5_2:18303745-18303764 Msa0761230:intron 35.0%
TTCGAACATCCTAAGTTGTT+TGG - chr5_2:18303784-18303803 Msa0761230:intron 35.0%
ACAGTTCCTCAACAACATAT+TGG + chr5_2:18303851-18303870 None:intergenic 35.0%
! AGTTTTTATCTCTGGCAGTA+GGG - chr5_2:18303890-18303909 Msa0761230:intron 35.0%
TCTTGTTGCCAAAGAATCTA+AGG - chr5_2:18303968-18303987 Msa0761230:intron 35.0%
AGTGAATAACAAACCTGTCA+TGG - chr5_2:18304044-18304063 Msa0761230:intron 35.0%
CGAACTATTTAATCCATGAC+AGG + chr5_2:18304060-18304079 None:intergenic 35.0%
AAACTATACAGTACTGTGCA+TGG + chr5_2:18304095-18304114 None:intergenic 35.0%
ACTCATAAATGGTGATAGGA+AGG + chr5_2:18304336-18304355 None:intergenic 35.0%
TAGATCGCCATTCAATTAGA+GGG + chr5_2:18304587-18304606 None:intergenic 35.0%
TTAGATCGCCATTCAATTAG+AGG + chr5_2:18304588-18304607 None:intergenic 35.0%
! TTTTCAGTCACAATCCATTC+CGG - chr5_2:18304620-18304639 Msa0761230:intron 35.0%
!!! GTGGCAGTTCTTTTGATTTT+TGG - chr5_2:18304689-18304708 Msa0761230:intron 35.0%
ATTGCAATATGCCGAATGTA+AGG - chr5_2:18304715-18304734 Msa0761230:intron 35.0%
TTGCAATATGCCGAATGTAA+GGG - chr5_2:18304716-18304735 Msa0761230:intron 35.0%
!! ATTTTGTTTCACAGGCTAGT+TGG - chr5_2:18304812-18304831 Msa0761230:intron 35.0%
! ATTGATGGTAGAAAACAGCA+TGG - chr5_2:18304991-18305010 Msa0761230:intron 35.0%
! TTTTACATGTGTATACCAGC+TGG - chr5_2:18305023-18305042 Msa0761230:intron 35.0%
!!! TTATCGGTTATTTTGGTTGG+CGG - chr5_2:18305117-18305136 Msa0761230:intron 35.0%
TCAGGTTATCAAGAGCAAAT+GGG + chr5_2:18305334-18305353 None:intergenic 35.0%
ATCAGGTTATCAAGAGCAAA+TGG + chr5_2:18305335-18305354 None:intergenic 35.0%
ATTGTTATGCCAATTTCCCT+TGG + chr5_2:18305376-18305395 None:intergenic 35.0%
!! AGGGGATTATTTTTCACTAG+GGG + chr5_2:18305623-18305642 None:intergenic 35.0%
CAATTTATTTGGGTCATAGG+TGG + chr5_2:18305714-18305733 None:intergenic 35.0%
CACCTATGACCCAAATAAAT+TGG - chr5_2:18305712-18305731 Msa0761230:intron 35.0%
CGAGGACATTCCAATTTATT+TGG + chr5_2:18305725-18305744 None:intergenic 35.0%
AACCTGCTATTGATGTAAAG+AGG - chr5_2:18305761-18305780 Msa0761230:intron 35.0%
ACCTGCTATTGATGTAAAGA+GGG - chr5_2:18305762-18305781 Msa0761230:intron 35.0%
ATGTCAATAAGCAGTATGGT+GGG + chr5_2:18305814-18305833 None:intergenic 35.0%
AATGTCAATAAGCAGTATGG+TGG + chr5_2:18305815-18305834 None:intergenic 35.0%
TCATGCTAACATTTGTCCTA+AGG - chr5_2:18306189-18306208 Msa0761230:intron 35.0%
CATGCTAACATTTGTCCTAA+GGG - chr5_2:18306190-18306209 Msa0761230:intron 35.0%
AATGCTAACATGTACCCTTA+GGG + chr5_2:18306348-18306367 None:intergenic 35.0%
AAATGCTAACATGTACCCTT+AGG + chr5_2:18306349-18306368 None:intergenic 35.0%
! ATGCTTCCTTTTCCCATATT+GGG - chr5_2:18306590-18306609 Msa0761230:intron 35.0%
ATAAAGCCTTTGCAGTTGAA+AGG - chr5_2:18306620-18306639 Msa0761230:intron 35.0%
AGACATAAATGTTGGGCATT+TGG - chr5_2:18306878-18306897 Msa0761230:intron 35.0%
TTGTGAGAAAATTCAAAGGC+TGG - chr5_2:18307108-18307127 Msa0761230:intron 35.0%
TTCTTATAAAAAGGACCGGA+GGG + chr5_2:18307160-18307179 None:intergenic 35.0%
TTTCTTATAAAAAGGACCGG+AGG + chr5_2:18307161-18307180 None:intergenic 35.0%
ACAACCACTAATGATTGTCT+TGG + chr5_2:18307205-18307224 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG - chr5_2:18307403-18307422 Msa0761230:CDS 35.0%
TTCTTATAAATAGGACCGGA+GGG - chr5_2:18307404-18307423 Msa0761230:CDS 35.0%
ATACTAACCAAGAGAAGAAG+AGG - chr5_2:18307450-18307469 Msa0761230:intron 35.0%
! ATCATGTTTTGCAGTATGTC+TGG - chr5_2:18307589-18307608 Msa0761230:intron 35.0%
AAGGAAGAAGCCATATTGTT+TGG - chr5_2:18307711-18307730 Msa0761230:CDS 35.0%
!! GAAAACTTTTTGTTGCTTCC+CGG - chr5_2:18307796-18307815 Msa0761230:intron 35.0%
GACCATACAAAAGGAAACAA+AGG + chr5_2:18307833-18307852 None:intergenic 35.0%
GATGCCATCATCTATATACA+AGG + chr5_2:18307908-18307927 None:intergenic 35.0%
ATAGTATGCAAGTAGACAGT+CGG - chr5_2:18308196-18308215 Msa0761230:intron 35.0%
TCACATAGCATACTGGAAAT+TGG - chr5_2:18308263-18308282 Msa0761230:intron 35.0%
! GTTCTTTGAAAGTAGGGAAT+TGG + chr5_2:18308406-18308425 None:intergenic 35.0%
AGAAAACAAGATTGCTAAGG+AGG + chr5_2:18308537-18308556 None:intergenic 35.0%
TGTCAGGTTAACATCCAAAT+TGG - chr5_2:18308622-18308641 Msa0761230:intron 35.0%
GTCAGGTTAACATCCAAATT+GGG - chr5_2:18308623-18308642 Msa0761230:intron 35.0%
TCAGGTTAACATCCAAATTG+GGG - chr5_2:18308624-18308643 Msa0761230:intron 35.0%
ATTATCAGCAGGTAAGGAAA+AGG + chr5_2:18308732-18308751 None:intergenic 35.0%
!!! TCATTTTTCTCTGGAACTTG+AGG - chr5_2:18308762-18308781 Msa0761230:intron 35.0%
!! TGTAGCAGTTATGTTTTAGG+CGG - chr5_2:18309139-18309158 Msa0761230:intron 35.0%
TGGATAAATAAGGGATCTGA+AGG - chr5_2:18309181-18309200 Msa0761230:intron 35.0%
ATCTGAAGGACAATGTCAAT+AGG - chr5_2:18309195-18309214 Msa0761230:intron 35.0%
! ATAGGCATTTTATTGGGGAT+TGG - chr5_2:18309213-18309232 Msa0761230:intron 35.0%
CATTTAGATTAAGGCCTTCT+TGG + chr5_2:18309379-18309398 None:intergenic 35.0%
CAAGAAGGCCTTAATCTAAA+TGG - chr5_2:18309377-18309396 Msa0761230:intron 35.0%
!! AGTAATGCTGACTTGTTGTT+TGG - chr5_2:18309598-18309617 Msa0761230:CDS 35.0%
!! GGAGGTATTACAATTGTTTG+TGG - chr5_2:18309619-18309638 Msa0761230:intron 35.0%
!! AATAACGGACAAAAAACAGG+GGG + chr5_2:18309771-18309790 None:intergenic 35.0%
GGATAAGGATACAAATTCAC+TGG + chr5_2:18310017-18310036 None:intergenic 35.0%
!! TTTCTGGAGCAACATTTCTA+GGG - chr5_2:18310164-18310183 Msa0761230:intron 35.0%
!! TTGGTTGCTTTCCTTTTCAA+GGG - chr5_2:18310199-18310218 Msa0761230:intron 35.0%
GATTCATAAAATTACCTGGG+TGG + chr5_2:18310275-18310294 None:intergenic 35.0%
! GGTTCATCCTTTTCACTTAT+TGG - chr5_2:18310400-18310419 Msa0761230:intron 35.0%
TGGATTTAGTTAATGCTCTC+AGG - chr5_2:18310539-18310558 Msa0761230:intron 35.0%
TCAGGCAACAATCTAATCAT+TGG - chr5_2:18310557-18310576 Msa0761230:intron 35.0%
TGGATTTAGACATCTTGCTT+TGG - chr5_2:18310669-18310688 Msa0761230:intron 35.0%
! ACTCTATGGTTTTCATAGTC+TGG + chr5_2:18310715-18310734 None:intergenic 35.0%
! TGAATTTTGTGGTACAGGAT+AGG - chr5_2:18311099-18311118 Msa0761230:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr5_2:18311157-18311176 Msa0761230:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG - chr5_2:18311177-18311196 Msa0761230:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG - chr5_2:18311182-18311201 Msa0761230:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr5_2:18311238-18311257 Msa0761230:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr5_2:18311323-18311342 Msa0761230:CDS 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr5_2:18311335-18311354 Msa0761230:CDS 35.0%
CGTGTGTGCATTGTTATATT+AGG - chr5_2:18311608-18311627 Msa0761230:intron 35.0%
TGTGCATTGTTATATTAGGC+TGG - chr5_2:18311612-18311631 Msa0761230:intron 35.0%
CAATCAAATGAGGATGCATT+TGG + chr5_2:18311800-18311819 None:intergenic 35.0%
CAAATGCATCCTCATTTGAT+TGG - chr5_2:18311798-18311817 Msa0761230:intron 35.0%
GTGGTATATCCAATCAAATG+AGG + chr5_2:18311810-18311829 None:intergenic 35.0%
CATTAAAGGAAATCTGGAAG+TGG + chr5_2:18311829-18311848 None:intergenic 35.0%
CACTTCCAGATTTCCTTTAA+TGG - chr5_2:18311827-18311846 Msa0761230:intron 35.0%
TCATGCCATTAAAGGAAATC+TGG + chr5_2:18311835-18311854 None:intergenic 35.0%
!!! TGACATCGTACTATTTTTGC+AGG - chr5_2:18311951-18311970 Msa0761230:intron 35.0%
CGGAGAGAAACATAATTTAC+TGG + chr5_2:18311979-18311998 None:intergenic 35.0%
GTTGTGTAAAACCAAGTTTG+AGG - chr5_2:18311998-18312017 Msa0761230:intron 35.0%
ACGGTTTCAATCCATATCTT+TGG - chr5_2:18312042-18312061 Msa0761230:intron 35.0%
TTCAATCGGATGTAAGTTGT+AGG - chr5_2:18312266-18312285 Msa0761230:intron 35.0%
TGTAGGATACATGATACACA+TGG - chr5_2:18312283-18312302 Msa0761230:intron 35.0%
TAACTTTCCCATTGATGTGA+AGG - chr5_2:18312352-18312371 Msa0761230:intron 35.0%
TTGAACTCCTTCACATCAAT+GGG + chr5_2:18312362-18312381 None:intergenic 35.0%
!! TTGCTGGCTTAAATATTCTG+TGG - chr5_2:18312513-18312532 Msa0761230:intron 35.0%
! TCAATTTTCTTTCTTGCTGC+TGG - chr5_2:18312656-18312675 Msa0761230:intron 35.0%
AGAACCTTAATGAATGTGTG+TGG - chr5_2:18312902-18312921 Msa0761230:intron 35.0%
GAACCTTAATGAATGTGTGT+GGG - chr5_2:18312903-18312922 Msa0761230:intron 35.0%
ATCCTGGTTTATCTTTCAAG+CGG - chr5_2:18313212-18313231 Msa0761230:intron 35.0%
!!! GTGCTACTTTTGATGTTTGT+TGG - chr5_2:18313287-18313306 Msa0761230:CDS 35.0%
CATAAACTTTACATGTCTGG+AGG - chr5_2:18313324-18313343 Msa0761230:CDS 35.0%
TACAATTTCATCGTGATGAG+TGG + chr5_2:18313381-18313400 None:intergenic 35.0%
! GATTTGGATACCATTTTCGC+AGG + chr5_2:18302815-18302834 None:intergenic 40.0%
GCGAAAATGGTATCCAAATC+TGG - chr5_2:18302815-18302834 Msa0761230:three_prime_UTR 40.0%
! GAAGAAGAAGAACCTTTTGG+GGG + chr5_2:18302867-18302886 None:intergenic 40.0%
ATACTGAATTCCAGTACCAG+CGG + chr5_2:18303095-18303114 None:intergenic 40.0%
! ATGTGTGATTTGTGGATCAG+AGG - chr5_2:18303753-18303772 Msa0761230:intron 40.0%
! GGTTCGACAGTTTTTATCTC+TGG - chr5_2:18303882-18303901 Msa0761230:intron 40.0%
! CAGTTTTTATCTCTGGCAGT+AGG - chr5_2:18303889-18303908 Msa0761230:intron 40.0%
TTAAATAGTTCGACTCCTCC+TGG - chr5_2:18304068-18304087 Msa0761230:intron 40.0%
CAAACTGCAAGGAAGAACTT+AGG + chr5_2:18304126-18304145 None:intergenic 40.0%
CTAAGTTCTTCCTTGCAGTT+TGG - chr5_2:18304124-18304143 Msa0761230:intron 40.0%
ACAATCCAACACCAATAAGC+CGG + chr5_2:18304642-18304661 None:intergenic 40.0%
!! TTGGTGTTGGATTGTCTGTT+TGG - chr5_2:18304647-18304666 Msa0761230:intron 40.0%
!! CTGACAGCATTTTGTTTCAC+AGG - chr5_2:18304804-18304823 Msa0761230:intron 40.0%
!! ACTGCTCTGGGATATGTTTA+TGG - chr5_2:18305047-18305066 Msa0761230:intron 40.0%
!! GGGATATGTTTATGGTGGAT+TGG - chr5_2:18305055-18305074 Msa0761230:intron 40.0%
GTTATCAAGAGCAAATGGGT+GGG + chr5_2:18305330-18305349 None:intergenic 40.0%
! TCTTGATAACCTGATGCGAA+AGG - chr5_2:18305340-18305359 Msa0761230:intron 40.0%
! CTTGATAACCTGATGCGAAA+GGG - chr5_2:18305341-18305360 Msa0761230:intron 40.0%
AAGGACATTCCAAGGGAAAT+TGG - chr5_2:18305364-18305383 Msa0761230:intron 40.0%
GAGTTTGGATCTTCACAAGT+TGG + chr5_2:18305427-18305446 None:intergenic 40.0%
TCCAAACTCCCTTCTTTCTT+AGG - chr5_2:18305438-18305457 Msa0761230:intron 40.0%
TCCTAAGAAAGAAGGGAGTT+TGG + chr5_2:18305442-18305461 None:intergenic 40.0%
! GGTGTTGTCCTAAGAAAGAA+GGG + chr5_2:18305449-18305468 None:intergenic 40.0%
!! TGGTGTTGTCCTAAGAAAGA+AGG + chr5_2:18305450-18305469 None:intergenic 40.0%
! GGTGCTGCAGATATGAAATA+TGG + chr5_2:18305477-18305496 None:intergenic 40.0%
TTCAGAGACTATCCTGAATG+AGG - chr5_2:18305588-18305607 Msa0761230:intron 40.0%
!! GGGGATTATTTTTCACTAGG+GGG + chr5_2:18305622-18305641 None:intergenic 40.0%
AATCCCCTTTCCAACTCTAT+TGG - chr5_2:18305635-18305654 Msa0761230:intron 40.0%
AGCTCCAATAGAGTTGGAAA+GGG + chr5_2:18305642-18305661 None:intergenic 40.0%
AAGCTCCAATAGAGTTGGAA+AGG + chr5_2:18305643-18305662 None:intergenic 40.0%
TCTCAAAGCTCCAATAGAGT+TGG + chr5_2:18305648-18305667 None:intergenic 40.0%
TTTGTCAGATCTAGGAAACG+AGG + chr5_2:18305743-18305762 None:intergenic 40.0%
ATAGCAGGTTTGTCAGATCT+AGG + chr5_2:18305751-18305770 None:intergenic 40.0%
CCTGCTATTGATGTAAAGAG+GGG - chr5_2:18305763-18305782 Msa0761230:intron 40.0%
!! CTCATTCACAATTTGCTAGG+AGG + chr5_2:18305944-18305963 None:intergenic 40.0%
! CCTCTCATTCACAATTTGCT+AGG + chr5_2:18305947-18305966 None:intergenic 40.0%
CCTAGCAAATTGTGAATGAG+AGG - chr5_2:18305944-18305963 Msa0761230:intron 40.0%
! AGTTAAAGTGGGCTTGAAAG+AGG + chr5_2:18305976-18305995 None:intergenic 40.0%
TCCACTGAAGGAGTTAAAGT+GGG + chr5_2:18305987-18306006 None:intergenic 40.0%
AATTCTCAACATGTGCCCTT+AGG + chr5_2:18306208-18306227 None:intergenic 40.0%
AATCCTTAATGTGTGCCCTA+AGG - chr5_2:18306330-18306349 Msa0761230:intron 40.0%
ATCCTTAATGTGTGCCCTAA+GGG - chr5_2:18306331-18306350 Msa0761230:intron 40.0%
AGGTTGGAAGCCAATTTAAC+TGG - chr5_2:18306537-18306556 Msa0761230:intron 40.0%
! CATGCTTCCTTTTCCCATAT+TGG - chr5_2:18306589-18306608 Msa0761230:intron 40.0%
TGGTTACCTTTCAACTGCAA+AGG + chr5_2:18306629-18306648 None:intergenic 40.0%
!! GATAATAGGTTTTGGTCCCA+TGG - chr5_2:18306726-18306745 Msa0761230:CDS 40.0%
ACTCTATCCTCTTCTTCTCT+TGG + chr5_2:18307460-18307479 None:intergenic 40.0%
TTGCAGTGAATGCCAGAAAA+TGG - chr5_2:18307632-18307651 Msa0761230:intron 40.0%
ACAATATGGCTTCTTCCTTG+AGG + chr5_2:18307710-18307729 None:intergenic 40.0%
AACAAAGGTAAGATGGGAAC+CGG + chr5_2:18307818-18307837 None:intergenic 40.0%
TAAAGGCTTGATCATCTGCA+AGG + chr5_2:18307930-18307949 None:intergenic 40.0%
GATGATCAAGCCTTTATCAG+AGG - chr5_2:18307934-18307953 Msa0761230:intron 40.0%
TCACTTGGATCCTCTGATAA+AGG + chr5_2:18307947-18307966 None:intergenic 40.0%
CGAAGTCTTTGTGACACAAT+TGG - chr5_2:18308123-18308142 Msa0761230:intron 40.0%
TCTTTGTGACACAATTGGCA+CGG - chr5_2:18308128-18308147 Msa0761230:intron 40.0%
CACATAGTCACATAGCATAC+TGG - chr5_2:18308256-18308275 Msa0761230:intron 40.0%
! TAGGGAATTGGTGAAAGTGT+GGG + chr5_2:18308394-18308413 None:intergenic 40.0%
AGTAAGTCTGCGATATTGTC+AGG - chr5_2:18308606-18308625 Msa0761230:intron 40.0%
CTGCATATCGTTCAAGAATC+TGG + chr5_2:18308660-18308679 None:intergenic 40.0%
CAGATTCTTGAACGATATGC+AGG - chr5_2:18308658-18308677 Msa0761230:intron 40.0%
!! ATTGGGGATTGGTTATTGGT+TGG - chr5_2:18309224-18309243 Msa0761230:intron 40.0%
!! TTGGGGATTGGTTATTGGTT+GGG - chr5_2:18309225-18309244 Msa0761230:intron 40.0%
TCCGTTTCTATGTTTGGTAC+CGG - chr5_2:18309324-18309343 Msa0761230:intron 40.0%
ACCGGTACCAAACATAGAAA+CGG + chr5_2:18309328-18309347 None:intergenic 40.0%
ATCTAGTCGATCGCAATTAG+TGG - chr5_2:18309453-18309472 Msa0761230:intron 40.0%
GCAATTAGTGGAATCAGACT+TGG - chr5_2:18309465-18309484 Msa0761230:intron 40.0%
CTTTGGTACAATTCCATTGC+TGG - chr5_2:18309539-18309558 Msa0761230:intron 40.0%
!! AATGCTGACTTGTTGTTTGG+AGG - chr5_2:18309601-18309620 Msa0761230:CDS 40.0%
!!! ATTTTTGGGACTTTAGCTGG+AGG - chr5_2:18309643-18309662 Msa0761230:intron 40.0%
!! CTTTCTGGAGCAACATTTCT+AGG - chr5_2:18310163-18310182 Msa0761230:intron 40.0%
!! TTCTGGAGCAACATTTCTAG+GGG - chr5_2:18310165-18310184 Msa0761230:intron 40.0%
!! CTTGGTTGCTTTCCTTTTCA+AGG - chr5_2:18310198-18310217 Msa0761230:intron 40.0%
TTTCATCATCCTCTTCTCTG+TGG - chr5_2:18310231-18310250 Msa0761230:intron 40.0%
TTCATCATCCTCTTCTCTGT+GGG - chr5_2:18310232-18310251 Msa0761230:intron 40.0%
AACTCGCCCAATAAGTGAAA+AGG + chr5_2:18310410-18310429 None:intergenic 40.0%
!! ACTTCTGTTGCCTGCTTTTA+AGG - chr5_2:18310582-18310601 Msa0761230:intron 40.0%
!! CTTCTGTTGCCTGCTTTTAA+GGG - chr5_2:18310583-18310602 Msa0761230:intron 40.0%
! TTTTAGTGATGTGATGCCTG+AGG - chr5_2:18310747-18310766 Msa0761230:intron 40.0%
TTTAGTGATGTGATGCCTGA+GGG - chr5_2:18310748-18310767 Msa0761230:intron 40.0%
TTGTGGTACAGGATAGGATT+AGG - chr5_2:18311105-18311124 Msa0761230:intron 40.0%
TCTTCTTACAACGGCATCTA+CGG + chr5_2:18311225-18311244 None:intergenic 40.0%
AGGAAGAGTCAGGTTAAAAG+AGG - chr5_2:18311258-18311277 Msa0761230:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG - chr5_2:18311264-18311283 Msa0761230:intron 40.0%
AAGGGACATCACCAAAGATA+TGG + chr5_2:18312056-18312075 None:intergenic 40.0%
GAAGTTCATCTTACCTACTC+TGG - chr5_2:18312176-18312195 Msa0761230:intron 40.0%
CTTGAACTCCTTCACATCAA+TGG + chr5_2:18312363-18312382 None:intergenic 40.0%
AAGCCAGCAAATCTTCATGA+TGG + chr5_2:18312503-18312522 None:intergenic 40.0%
AAACAAAGAAGGCAAAAGGC+TGG + chr5_2:18312545-18312564 None:intergenic 40.0%
TATCTCAACTCTAAGCACCT+CGG - chr5_2:18312578-18312597 Msa0761230:intron 40.0%
TCGTTAATATGATCCTGTGC+AGG + chr5_2:18312608-18312627 None:intergenic 40.0%
CACAGGATCATATTAACGAC+TGG - chr5_2:18312609-18312628 Msa0761230:intron 40.0%
AGGATCATATTAACGACTGG+AGG - chr5_2:18312612-18312631 Msa0761230:intron 40.0%
AGAGATCAAAAGTGATGTGC+AGG - chr5_2:18312866-18312885 Msa0761230:intron 40.0%
! AATCCACCACAACTCTAAGA+GGG - chr5_2:18313085-18313104 Msa0761230:intron 40.0%
TCATTGCTTCCTTCAAGCAA+TGG + chr5_2:18313120-18313139 None:intergenic 40.0%
CATGAGAAATTAGGCTTGAC+TGG + chr5_2:18313148-18313167 None:intergenic 40.0%
TACCGCTTGAAAGATAAACC+AGG + chr5_2:18313217-18313236 None:intergenic 40.0%
! AGCCTGCAGAAATATTTTCC+AGG - chr5_2:18313347-18313366 Msa0761230:CDS 40.0%
! GACCTGGAAAATATTTCTGC+AGG + chr5_2:18313352-18313371 None:intergenic 40.0%
CATGAGAAAGAAACGAGTAG+TGG - chr5_2:18313485-18313504 Msa0761230:CDS 40.0%
! GCAGGGAGGGATTTTGAATT+TGG + chr5_2:18302797-18302816 None:intergenic 45.0%
AAAATCCCTCCCTGCGAAAA+TGG - chr5_2:18302802-18302821 Msa0761230:three_prime_UTR 45.0%
ATTGGGAGGTTGACCAGATT+TGG + chr5_2:18302831-18302850 None:intergenic 45.0%
TCGTGGTGAATGGTGATTTC+AGG - chr5_2:18302957-18302976 Msa0761230:three_prime_UTR 45.0%
GCATGTCAAGGATCTTCTTC+TGG + chr5_2:18303635-18303654 None:intergenic 45.0%
GAAGAAGATCCTTGACATGC+CGG - chr5_2:18303635-18303654 Msa0761230:intron 45.0%
AAGAAGATCCTTGACATGCC+GGG - chr5_2:18303636-18303655 Msa0761230:intron 45.0%
CTGCAGTGACCAAACAACTT+AGG + chr5_2:18303796-18303815 None:intergenic 45.0%
CTAAGTTGTTTGGTCACTGC+AGG - chr5_2:18303794-18303813 Msa0761230:intron 45.0%
GAGGAACTGTTCGTACGAAT+AGG - chr5_2:18303861-18303880 Msa0761230:intron 45.0%
GGCAGTAGGGAAAGAAAGAA+AGG - chr5_2:18303903-18303922 Msa0761230:intron 45.0%
CACAATCCATTCCGGCTTAT+TGG - chr5_2:18304628-18304647 Msa0761230:intron 45.0%
GTTTGGACATTTGCAGTAGC+TGG - chr5_2:18304664-18304683 Msa0761230:intron 45.0%
ACATTTGCAGTAGCTGGATG+TGG - chr5_2:18304670-18304689 Msa0761230:intron 45.0%
! TTTCACAGGCTAGTTGGTGT+AGG - chr5_2:18304818-18304837 Msa0761230:intron 45.0%
!! TGGTGCTGCAAGACTTATGA+AGG + chr5_2:18304852-18304871 None:intergenic 45.0%
TAAGTCAAACCTGTGCCACA+GGG + chr5_2:18304892-18304911 None:intergenic 45.0%
ATAAGTCAAACCTGTGCCAC+AGG + chr5_2:18304893-18304912 None:intergenic 45.0%
! TAACGAATTCTGGAGGGAAC+TGG + chr5_2:18304920-18304939 None:intergenic 45.0%
!! GCTCTGGGATATGTTTATGG+TGG - chr5_2:18305050-18305069 Msa0761230:intron 45.0%
ATGTGTGGGATGCTATGACA+AGG + chr5_2:18305266-18305285 None:intergenic 45.0%
AAATGGGTGGGATGCTAATG+TGG + chr5_2:18305318-18305337 None:intergenic 45.0%
GGTTATCAAGAGCAAATGGG+TGG + chr5_2:18305331-18305350 None:intergenic 45.0%
ATAACCTGATGCGAAAGGGA+AGG - chr5_2:18305345-18305364 Msa0761230:intron 45.0%
GAAAGGGAAGGACATTCCAA+GGG - chr5_2:18305357-18305376 Msa0761230:intron 45.0%
AAGATAGATGGGTAGTGCAG+AGG - chr5_2:18305555-18305574 Msa0761230:intron 45.0%
GCTCCAATAGAGTTGGAAAG+GGG + chr5_2:18305641-18305660 None:intergenic 45.0%
CCCCTCTTTACATCAATAGC+AGG + chr5_2:18305766-18305785 None:intergenic 45.0%
GTCCACTGAAGGAGTTAAAG+TGG + chr5_2:18305988-18306007 None:intergenic 45.0%
GTTGAATTTGGGTCCACTGA+AGG + chr5_2:18305999-18306018 None:intergenic 45.0%
TACCCTTAGGGCACACATTA+AGG + chr5_2:18306336-18306355 None:intergenic 45.0%
ATGCAACGCGCCAGTTAAAT+TGG + chr5_2:18306550-18306569 None:intergenic 45.0%
ATTGGATGTTCGAGTCTGCT+TGG + chr5_2:18306755-18306774 None:intergenic 45.0%
GGATACCCACCAGCAAAAAA+AGG + chr5_2:18307518-18307537 None:intergenic 45.0%
ACAAAGGTAAGATGGGAACC+GGG + chr5_2:18307817-18307836 None:intergenic 45.0%
TCTGCTTGGAAACAGAAGCA+GGG + chr5_2:18308011-18308030 None:intergenic 45.0%
! TGTTAGGGTTTTCCTCTGCT+TGG + chr5_2:18308025-18308044 None:intergenic 45.0%
GTAGGGAATTGGTGAAAGTG+TGG + chr5_2:18308395-18308414 None:intergenic 45.0%
! GGTGAACTGATTCCCCAATT+TGG + chr5_2:18308639-18308658 None:intergenic 45.0%
TCATTGGAGCTTACTCCTAC+TGG - chr5_2:18308946-18308965 Msa0761230:intron 45.0%
CATTGGAGCTTACTCCTACT+GGG - chr5_2:18308947-18308966 Msa0761230:intron 45.0%
ATTGGAGCTTACTCCTACTG+GGG - chr5_2:18308948-18308967 Msa0761230:intron 45.0%
AGACCAAGCTCTCGAATTCT+TGG - chr5_2:18309250-18309269 Msa0761230:intron 45.0%
GACCAAGCTCTCGAATTCTT+GGG - chr5_2:18309251-18309270 Msa0761230:intron 45.0%
TTCCCAAGAATTCGAGAGCT+TGG + chr5_2:18309256-18309275 None:intergenic 45.0%
AAGTGCATTGCTACCAGCAA+TGG + chr5_2:18309555-18309574 None:intergenic 45.0%
!!! GGGATTTTTGGGACTTTAGC+TGG - chr5_2:18309640-18309659 Msa0761230:intron 45.0%
TTGAAAACCTAGGCTCGCAA+AGG - chr5_2:18309794-18309813 Msa0761230:CDS 45.0%
CGCAAAGGTTGTGTATTGCT+TGG - chr5_2:18309809-18309828 Msa0761230:intron 45.0%
! TCTAGGGGCAATCTTTTGCT+TGG - chr5_2:18310180-18310199 Msa0761230:intron 45.0%
!! TTCCTTTTCAAGGGCTTGTC+TGG - chr5_2:18310208-18310227 Msa0761230:intron 45.0%
AACCAGACAAGCCCTTGAAA+AGG + chr5_2:18310213-18310232 None:intergenic 45.0%
AGTCTATTCATGCAAGGCGA+CGG + chr5_2:18310444-18310463 None:intergenic 45.0%
GCGTGTCCATTGCCTTAATT+TGG - chr5_2:18310519-18310538 Msa0761230:intron 45.0%
CCATCACTAAAAACACCCTC+AGG + chr5_2:18310766-18310785 None:intergenic 45.0%
!!! CCTGAGGGTGTTTTTAGTGA+TGG - chr5_2:18310763-18310782 Msa0761230:intron 45.0%
TGACACCATTAGAGAGAGAG+TGG - chr5_2:18311130-18311149 Msa0761230:intron 45.0%
GACACCATTAGAGAGAGAGT+GGG - chr5_2:18311131-18311150 Msa0761230:intron 45.0%
ACACCATTAGAGAGAGAGTG+GGG - chr5_2:18311132-18311151 Msa0761230:intron 45.0%
CTTCTTACAACGGCATCTAC+GGG + chr5_2:18311224-18311243 None:intergenic 45.0%
GATCAAATGGAGGAAGAGTC+AGG - chr5_2:18311248-18311267 Msa0761230:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr5_2:18311404-18311423 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr5_2:18311405-18311424 None:intergenic 45.0%
GATATCATAGCACGGCGTAA+GGG - chr5_2:18311462-18311481 Msa0761230:CDS 45.0%
ACGGCGTAAGGGAAATACAA+TGG - chr5_2:18311473-18311492 Msa0761230:CDS 45.0%
! TTTGGTTCATGCGAAATGCG+CGG + chr5_2:18311680-18311699 None:intergenic 45.0%
GTCGAAATTGCCATAGACAG+CGG + chr5_2:18312024-18312043 None:intergenic 45.0%
GCTGTCTATGGCAATTTCGA+CGG - chr5_2:18312023-18312042 Msa0761230:intron 45.0%
GGAAATTAGGTGCAACCTGA+AGG + chr5_2:18312098-18312117 None:intergenic 45.0%
!! ATCTTACCTACTCTGGAGTC+TGG - chr5_2:18312183-18312202 Msa0761230:intron 45.0%
!! GGAGTCTGGCCTTTTTAGTA+TGG - chr5_2:18312197-18312216 Msa0761230:intron 45.0%
TGGCCATCATGAAGATTTGC+TGG - chr5_2:18312497-18312516 Msa0761230:intron 45.0%
TCTTTCTTGCTGCTGGAGTA+TGG - chr5_2:18312663-18312682 Msa0761230:intron 45.0%
TGCCAATCCTAGCTACTCAT+CGG - chr5_2:18312780-18312799 Msa0761230:intron 45.0%
CAGCCCACACACATTCATTA+AGG + chr5_2:18312909-18312928 None:intergenic 45.0%
CTTAATGAATGTGTGTGGGC+TGG - chr5_2:18312907-18312926 Msa0761230:intron 45.0%
GAATCCACCACAACTCTAAG+AGG - chr5_2:18313084-18313103 Msa0761230:intron 45.0%
! ATCCACCACAACTCTAAGAG+GGG - chr5_2:18313086-18313105 Msa0761230:intron 45.0%
GTAAGGAAGCCATTGCTTGA+AGG - chr5_2:18313108-18313127 Msa0761230:intron 45.0%
TGATGAGTGGTTACAAGACC+TGG + chr5_2:18313368-18313387 None:intergenic 45.0%
!! TAAAAATTTATTCAATTTAT+CGG + chr5_2:18308846-18308865 None:intergenic 5.0%
!!! TTTCTAATTTTTTTTTTTTT+TGG - chr5_2:18310889-18310908 Msa0761230:intron 5.0%
! GGATACCATTTTCGCAGGGA+GGG + chr5_2:18302810-18302829 None:intergenic 50.0%
! TGGATACCATTTTCGCAGGG+AGG + chr5_2:18302811-18302830 None:intergenic 50.0%
!! CTTTTGGGGGTAAACCACGA+GGG + chr5_2:18302854-18302873 None:intergenic 50.0%
CGAGGAGCTATAGCTAGCAA+TGG - chr5_2:18303025-18303044 Msa0761230:three_prime_UTR 50.0%
CTTGCAACTTGCACTGAGTC+TGG - chr5_2:18303061-18303080 Msa0761230:three_prime_UTR 50.0%
!! CACATGTGTTGGTGCTACAG+AGG + chr5_2:18303359-18303378 None:intergenic 50.0%
AGAAGATCCTTGACATGCCG+GGG - chr5_2:18303637-18303656 Msa0761230:intron 50.0%
AAAACAACCCCGGCATGTCA+AGG + chr5_2:18303647-18303666 None:intergenic 50.0%
TACAGTACTGTGCATGGTCC+AGG + chr5_2:18304089-18304108 None:intergenic 50.0%
CCAACACCAATAAGCCGGAA+TGG + chr5_2:18304637-18304656 None:intergenic 50.0%
CCATTCCGGCTTATTGGTGT+TGG - chr5_2:18304634-18304653 Msa0761230:intron 50.0%
!! GGGGCGTTGTCATCTATGAA+TGG + chr5_2:18304872-18304891 None:intergenic 50.0%
AAGTCAAACCTGTGCCACAG+GGG + chr5_2:18304891-18304910 None:intergenic 50.0%
TATACCAGCTGGAACTGCTC+TGG - chr5_2:18305034-18305053 Msa0761230:intron 50.0%
ATACCAGCTGGAACTGCTCT+GGG - chr5_2:18305035-18305054 Msa0761230:intron 50.0%
ATGTCCTTCCCTTTCGCATC+AGG + chr5_2:18305352-18305371 None:intergenic 50.0%
CGAAAGGGAAGGACATTCCA+AGG - chr5_2:18305356-18305375 Msa0761230:intron 50.0%
GGTAGTGCAGAGGAATGCAA+TGG - chr5_2:18305565-18305584 Msa0761230:intron 50.0%
GGGGCAGATTATCCTCATTC+AGG + chr5_2:18305603-18305622 None:intergenic 50.0%
GCCCACTTTAACTCCTTCAG+TGG - chr5_2:18305983-18306002 Msa0761230:intron 50.0%
TTAACTGGCGCGTTGCATTC+TGG - chr5_2:18306552-18306571 Msa0761230:intron 50.0%
TAACTGGCGCGTTGCATTCT+GGG - chr5_2:18306553-18306572 Msa0761230:intron 50.0%
CGAGTCTGCTTGGATTCCAT+GGG + chr5_2:18306745-18306764 None:intergenic 50.0%
TCGAGTCTGCTTGGATTCCA+TGG + chr5_2:18306746-18306765 None:intergenic 50.0%
TGGCAACAGAGCAACTCACT+TGG + chr5_2:18307962-18307981 None:intergenic 50.0%
CTCTGCTTGGAAACAGAAGC+AGG + chr5_2:18308012-18308031 None:intergenic 50.0%
CTGCTTCTGTTTCCAAGCAG+AGG - chr5_2:18308010-18308029 Msa0761230:intron 50.0%
TCAGTTCTACGCTCTCGTGA+TGG - chr5_2:18308472-18308491 Msa0761230:intron 50.0%
!! AACTTTAGAAGGGGCACCCA+TGG + chr5_2:18308498-18308517 None:intergenic 50.0%
TTGGAGCTTACTCCTACTGG+GGG - chr5_2:18308949-18308968 Msa0761230:intron 50.0%
TACACAACCTTTGCGAGCCT+AGG + chr5_2:18309804-18309823 None:intergenic 50.0%
ATTCATGCAAGGCGACGGAA+TGG + chr5_2:18310439-18310458 None:intergenic 50.0%
ACAGGGTCACCCTTAAAAGC+AGG + chr5_2:18310595-18310614 None:intergenic 50.0%
ACCAGAGTATGTGATGCCTG+AGG - chr5_2:18310788-18310807 Msa0761230:intron 50.0%
CCAGAGTATGTGATGCCTGA+GGG - chr5_2:18310789-18310808 Msa0761230:intron 50.0%
CACCATTAGAGAGAGAGTGG+GGG - chr5_2:18311133-18311152 Msa0761230:intron 50.0%
TACCCCCACTCTCTCTCTAA+TGG + chr5_2:18311138-18311157 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr5_2:18311400-18311419 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr5_2:18311406-18311425 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr5_2:18311403-18311422 Msa0761230:intron 50.0%
CTTAGTGGGATAAGGCTTGG+TGG - chr5_2:18311406-18311425 Msa0761230:intron 50.0%
GGATATCATAGCACGGCGTA+AGG - chr5_2:18311461-18311480 Msa0761230:CDS 50.0%
ATAGACAGCGGCCTCAAACT+TGG + chr5_2:18312012-18312031 None:intergenic 50.0%
! AAGTTTGAGGCCGCTGTCTA+TGG - chr5_2:18312011-18312030 Msa0761230:intron 50.0%
AAAAGGCCAGACTCCAGAGT+AGG + chr5_2:18312192-18312211 None:intergenic 50.0%
GCTGCTGGAGTATGGTTCAT+AGG - chr5_2:18312671-18312690 Msa0761230:intron 50.0%
CACCGATGAGTAGCTAGGAT+TGG + chr5_2:18312785-18312804 None:intergenic 50.0%
GAGATCACCGATGAGTAGCT+AGG + chr5_2:18312790-18312809 None:intergenic 50.0%
TACCCCTCTTAGAGTTGTGG+TGG + chr5_2:18313091-18313110 None:intergenic 50.0%
CCTTACCCCTCTTAGAGTTG+TGG + chr5_2:18313094-18313113 None:intergenic 50.0%
! CCACAACTCTAAGAGGGGTA+AGG - chr5_2:18313091-18313110 Msa0761230:intron 50.0%
GTAAACCACGAGGGATTGGG+AGG + chr5_2:18302845-18302864 None:intergenic 55.0%
GGGGTAAACCACGAGGGATT+GGG + chr5_2:18302848-18302867 None:intergenic 55.0%
!! CCTTTTGGGGGTAAACCACG+AGG + chr5_2:18302855-18302874 None:intergenic 55.0%
CCTCGTGGTTTACCCCCAAA+AGG - chr5_2:18302852-18302871 Msa0761230:three_prime_UTR 55.0%
GAGTCTGGTGTTTGTACCGC+TGG - chr5_2:18303076-18303095 Msa0761230:three_prime_UTR 55.0%
GGTGTTTGTACCGCTGGTAC+TGG - chr5_2:18303082-18303101 Msa0761230:three_prime_UTR 55.0%
AGTACTGTGCATGGTCCAGG+AGG + chr5_2:18304086-18304105 None:intergenic 55.0%
! CAGGCTAGTTGGTGTAGGTG+AGG - chr5_2:18304823-18304842 Msa0761230:intron 55.0%
CATAGATGACAACGCCCCTG+TGG - chr5_2:18304874-18304893 Msa0761230:intron 55.0%
TATCCCAGAGCAGTTCCAGC+TGG + chr5_2:18305041-18305060 None:intergenic 55.0%
AACTGGCGCGTTGCATTCTG+GGG - chr5_2:18306554-18306573 Msa0761230:intron 55.0%
TACGCTCTCGTGATGGCCAT+GGG - chr5_2:18308479-18308498 Msa0761230:intron 55.0%
GCAGTTCACCCACAGAGAAG+AGG + chr5_2:18310243-18310262 None:intergenic 55.0%
ACTGCTGATATTCGCCACCC+AGG - chr5_2:18310258-18310277 Msa0761230:intron 55.0%
ATGCAAGGCGACGGAATGGT+CGG + chr5_2:18310435-18310454 None:intergenic 55.0%
CCCTCAGGCATCACATACTC+TGG + chr5_2:18310792-18310811 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr5_2:18311392-18311411 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr5_2:18311391-18311410 Msa0761230:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr5_2:18311392-18311411 Msa0761230:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr5_2:18311398-18311417 Msa0761230:intron 55.0%
GATCCTGTGCAGGAAAACCG+AGG + chr5_2:18312598-18312617 None:intergenic 55.0%
GTCAACCTCCCAATCCCTCG+TGG - chr5_2:18302837-18302856 Msa0761230:three_prime_UTR 60.0%
GGGGGTAAACCACGAGGGAT+TGG + chr5_2:18302849-18302868 None:intergenic 60.0%
CTACGCTCTCGTGATGGCCA+TGG - chr5_2:18308478-18308497 Msa0761230:intron 60.0%
TTACTCCTACTGGGGGCCGA+AGG - chr5_2:18308956-18308975 Msa0761230:intron 60.0%
TCCCTTCCGCACCACTCGTT+GGG - chr5_2:18312070-18312089 Msa0761230:intron 60.0%
AAGGACCCCAACGAGTGGTG+CGG + chr5_2:18312079-18312098 None:intergenic 60.0%
ACCACTCGTTGGGGTCCTTC+AGG - chr5_2:18312080-18312099 Msa0761230:intron 60.0%
ACCTGAAGGACCCCAACGAG+TGG + chr5_2:18312084-18312103 None:intergenic 60.0%
! GCACCTCGGTTTTCCTGCAC+AGG - chr5_2:18312592-18312611 Msa0761230:intron 60.0%
! GGCTGGTCAGTACCCCTAAG+TGG - chr5_2:18312924-18312943 Msa0761230:intron 60.0%
TGACAACGCCCCTGTGGCAC+AGG - chr5_2:18304880-18304899 Msa0761230:intron 65.0%
!! GCGCGTTGCATTCTGGGGTG+AGG - chr5_2:18306559-18306578 Msa0761230:intron 65.0%
GTCCCTTCCGCACCACTCGT+TGG - chr5_2:18312069-18312088 Msa0761230:intron 65.0%
CCCCAACGAGTGGTGCGGAA+GGG + chr5_2:18312074-18312093 None:intergenic 65.0%
CCCTTCCGCACCACTCGTTG+GGG - chr5_2:18312071-18312090 Msa0761230:intron 65.0%
ACCCCAACGAGTGGTGCGGA+AGG + chr5_2:18312075-18312094 None:intergenic 65.0%
TCCTACTGGGGGCCGAAGGC+AGG - chr5_2:18308960-18308979 Msa0761230:intron 70.0%
TCCTGCCTTCGGCCCCCAGT+AGG + chr5_2:18308964-18308983 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 18302707 18313651 18302707 ID=Msa0761230;Name=Msa0761230
chr5_2 mRNA 18302707 18313651 18302707 ID=Msa0761230-mRNA-1;Parent=Msa0761230;Name=Msa0761230-mRNA-1;_AED=0.17;_eAED=0.17;_QI=114|0.92|1|1|1|1|15|493|464
chr5_2 exon 18302707 18303327 18302707 ID=Msa0761230-mRNA-1:exon:8005;Parent=Msa0761230-mRNA-1
chr5_2 exon 18303666 18303744 18303666 ID=Msa0761230-mRNA-1:exon:8004;Parent=Msa0761230-mRNA-1
chr5_2 exon 18304257 18304385 18304257 ID=Msa0761230-mRNA-1:exon:8003;Parent=Msa0761230-mRNA-1
chr5_2 exon 18306079 18306198 18306079 ID=Msa0761230-mRNA-1:exon:8002;Parent=Msa0761230-mRNA-1
chr5_2 exon 18306647 18306760 18306647 ID=Msa0761230-mRNA-1:exon:8001;Parent=Msa0761230-mRNA-1
chr5_2 exon 18307357 18307433 18307357 ID=Msa0761230-mRNA-1:exon:8000;Parent=Msa0761230-mRNA-1
chr5_2 exon 18307639 18307730 18307639 ID=Msa0761230-mRNA-1:exon:7999;Parent=Msa0761230-mRNA-1
chr5_2 exon 18308396 18308441 18308396 ID=Msa0761230-mRNA-1:exon:7998;Parent=Msa0761230-mRNA-1
chr5_2 exon 18309559 18309624 18309559 ID=Msa0761230-mRNA-1:exon:7997;Parent=Msa0761230-mRNA-1
chr5_2 exon 18309717 18309819 18309717 ID=Msa0761230-mRNA-1:exon:7996;Parent=Msa0761230-mRNA-1
chr5_2 exon 18311282 18311356 18311282 ID=Msa0761230-mRNA-1:exon:7995;Parent=Msa0761230-mRNA-1
chr5_2 exon 18311457 18311532 18311457 ID=Msa0761230-mRNA-1:exon:7994;Parent=Msa0761230-mRNA-1
chr5_2 exon 18311627 18311731 18311627 ID=Msa0761230-mRNA-1:exon:7993;Parent=Msa0761230-mRNA-1
chr5_2 exon 18313248 18313379 18313248 ID=Msa0761230-mRNA-1:exon:7992;Parent=Msa0761230-mRNA-1
chr5_2 exon 18313485 18313651 18313485 ID=Msa0761230-mRNA-1:exon:7991;Parent=Msa0761230-mRNA-1
chr5_2 five_prime_UTR 18313538 18313651 18313538 ID=Msa0761230-mRNA-1:five_prime_utr;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18313485 18313537 18313485 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18313248 18313379 18313248 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18311627 18311731 18311627 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18311457 18311532 18311457 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18311282 18311356 18311282 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18309717 18309819 18309717 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18309559 18309624 18309559 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18308396 18308441 18308396 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18307639 18307730 18307639 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18307357 18307433 18307357 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18306647 18306760 18306647 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18306079 18306198 18306079 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18304257 18304385 18304257 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18303666 18303744 18303666 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 CDS 18303200 18303327 18303200 ID=Msa0761230-mRNA-1:cds;Parent=Msa0761230-mRNA-1
chr5_2 three_prime_UTR 18302707 18303199 18302707 ID=Msa0761230-mRNA-1:three_prime_utr;Parent=Msa0761230-mRNA-1
Gene Sequence

>Msa0761230

ATGGTATCCAAATCTGGTCAACCTCCCAATCCCTCGTGGTTTACCCCCAAAAGGCTTCTTATAATATTTTGTGTGATAAACTTGATAAATTATGTGGATCGAGGAGCTATAGCTAGCAATGGTGTTAATGGAACTCTTGCAACTTGCACTGAGTCTGGTGTTTGTACCGCTGGTACTGGAATTCATCACAATCCATTCCGGCTTATTGGTGTTGGATTGTCTGTTTGGACATTTGCAGTAGCTGGATGTGGCAGTTCTTTTGATTTTTGGTCTATTGCAATATGCCGAATGCTAGTTGGTGTAGGTGAGGCTTCCTTCATAAGTCTTGCAGCACCATTCATAGATGACAACGCCCCTGTGGCACAGAAAACAGCATGGCTTGCTACATTTTACATGTGTATACCAGCTGGAACTGCTCTGGGATATGTTTATGGTGGATTGGTTGGAAGCCAATTTAACTGGCGCGTTGCATTCTGGGGTGAGGCGATTTTCATGCTTCCTTTTCCCATATTGGGTTTTTTAATAAAGCCTTTGCAGTTGAAAGGTTTTGGTCCCATGGAATCCAAGCAGACTCGAACATCCAATGAAACAAATGTTTCAGAAAATGGAGATGATGGCATCCTTGCAGATGATCAAGCCTTTATCAGAGGATCCAAGTTAACATCCAAATTGGGGAATCAGTTCACCAGATTCTTGAACGATATGCAGGAGCTTTTGCATGAGCGTGTGTATGTTATAAATGTTCTAGGGTATATAGCATACAATTTTGTCATTGGAGCTTACTCCTACTGGGGGCCGAAGGCAGGATATAGTATTTATCATATGAGTAATGCTGACTTGTTGTTTGGAGGTATTACAATTGTTTGTGGGATTTTTGGGACTTTAGCTGGAGGCTTGATTCTTGATAAGATGTCTTCAACAATCTCAAATGCTTTCAAGATTCTTTCTGGAGCAACATTTCTAGGGGCAATCTTTTGCTTGGTTGCTTTCCTTTTCAAGGGCTTGTCTGGTTTCATCATCCTCTTCTCTGTGGGTGAACTGCTGATATTCGCCACCCAGGCTCCAGTAAATTATGTTTCTCTCCGTTGTGTAAAACCAAGTTTGAGGCCGCTGTCTATGGCAATTTCGACGGTTTCAATCCATATCTTTGGTGATGTCCCTTCCGCACCACTCGTTGGGGTCCTTCAGGATCATATTAACGACTGGAGGAAAACATCTATTTGTCTAACATCAATTTTCTTTCTTGCTGCTGGAGTATGGTTCATAGGAACCTTTTTGAAAAGCGATGATATGTTTAACAAAGATGATGATGAAGAAGACGAATCCACCACAACTCTAAGAGGGGTAAGGAAGCCATTGCTTGAAGGAAGCAATGACGCTTCCAGTCAAGCCTAA

Protein sequence

>Msa0761230

MVSKSGQPPNPSWFTPKRLLIIFCVINLINYVDRGAIASNGVNGTLATCTESGVCTAGTGIHHNPFRLIGVGLSVWTFAVAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVAQKTAWLATFYMCIPAGTALGYVYGGLVGSQFNWRVAFWGEAIFMLPFPILGFLIKPLQLKGFGPMESKQTRTSNETNVSENGDDGILADDQAFIRGSKLTSKLGNQFTRFLNDMQELLHERVYVINVLGYIAYNFVIGAYSYWGPKAGYSIYHMSNADLLFGGITIVCGIFGTLAGGLILDKMSSTISNAFKILSGATFLGAIFCLVAFLFKGLSGFIILFSVGELLIFATQAPVNYVSLRCVKPSLRPLSMAISTVSIHIFGDVPSAPLVGVLQDHINDWRKTSICLTSIFFLAAGVWFIGTFLKSDDMFNKDDDEEDESTTTLRGVRKPLLEGSNDASSQA*