AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0763180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0763180 MtrunA17_Chr5g0410721 96.816 848 24 2 32 879 1 845 0.0 1715
Msa0763180 MtrunA17_Chr1g0164731 57.851 484 203 1 102 584 27 510 0.0 587
Msa0763180 MtrunA17_Chr1g0164761 50.615 488 216 4 114 600 2 465 2.56e-172 511
Msa0763180 MtrunA17_Chr3g0116441 43.200 375 195 7 113 475 11 379 2.27e-80 284
Msa0763180 MtrunA17_Chr8g0380981 37.717 403 172 10 117 451 40 431 3.27e-61 225
Msa0763180 MtrunA17_Chr1g0189211 30.104 578 311 16 91 590 121 683 9.77e-60 221
Msa0763180 MtrunA17_Chr2g0303101 35.732 403 180 9 117 451 49 440 1.69e-58 217
Msa0763180 MtrunA17_Chr1g0199511 51.064 188 88 1 264 451 291 474 1.98e-57 215
Msa0763180 MtrunA17_Chr5g0397501 36.148 379 200 13 189 542 291 652 4.07e-52 198
Msa0763180 MtrunA17_Chr7g0214951 59.483 116 29 2 297 411 103 201 5.80e-39 144
Msa0763180 MtrunA17_Chr7g0261401 28.443 334 220 9 268 590 338 663 2.19e-32 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0763180 AT5G46910.1 60.558 753 245 11 37 771 5 723 0.0 904
Msa0763180 AT5G46910.2 67.370 616 180 5 37 635 5 616 0.0 873
Msa0763180 AT3G48430.1 38.522 379 185 8 113 451 13 383 1.57e-67 246
Msa0763180 AT2G34880.1 31.707 533 274 12 117 576 58 573 2.09e-62 226
Msa0763180 AT1G30810.3 36.090 399 186 9 117 455 56 445 1.80e-61 224
Msa0763180 AT1G30810.2 36.090 399 186 9 117 455 56 445 1.80e-61 224
Msa0763180 AT1G30810.1 36.090 399 186 9 117 455 56 445 1.80e-61 224
Msa0763180 AT4G20400.1 34.483 406 190 9 117 456 53 448 8.95e-61 223
Msa0763180 AT1G08620.3 31.250 560 284 18 117 590 157 701 1.38e-59 221
Msa0763180 AT1G08620.2 31.250 560 284 18 117 590 143 687 1.51e-59 221
Msa0763180 AT1G08620.4 31.250 560 284 18 117 590 143 687 1.51e-59 221
Msa0763180 AT1G08620.1 31.250 560 284 18 117 590 143 687 1.51e-59 221
Msa0763180 AT1G63490.1 38.790 281 148 4 188 452 35 307 8.61e-59 219
Msa0763180 AT1G63490.4 38.790 281 148 4 188 452 288 560 1.19e-58 219
Msa0763180 AT1G63490.2 38.790 281 148 4 188 452 288 560 1.34e-58 219
Msa0763180 AT4G20400.2 34.430 395 183 9 128 456 7 391 5.78e-57 211
Msa0763180 AT5G04240.1 50.532 188 89 1 264 451 259 442 6.29e-56 210
Msa0763180 AT2G38950.1 25.719 556 334 18 114 611 102 636 5.16e-36 146
Msa0763180 AT1G63490.3 48.913 92 47 0 361 452 10 101 3.64e-24 109

Find 220 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTATAGACAGGGACTTTA+TGG 0.160704 5_2:+22035585 None:intergenic
ATTCTGATTCAGGAATATTT+AGG 0.200884 5_2:-22033479 Msa0763180:CDS
CAAATCAACTTTGCGTCTAT+TGG 0.212579 5_2:-22036085 Msa0763180:CDS
AAAGTAGGAAGTTTAGAAAT+TGG 0.241743 5_2:-22032626 Msa0763180:three_prime_UTR
AAGGATATGAATACATATTT+TGG 0.248625 5_2:+22034024 None:intergenic
ATATCAACTTTATGATTAAC+AGG 0.250912 5_2:+22033140 None:intergenic
CAATAGACGCAAAGTTGATT+TGG 0.257289 5_2:+22036086 None:intergenic
ACATTGCCCCGGTGATTCTT+TGG 0.258512 5_2:+22038089 None:intergenic
TTATGGTCCATCAAAATATT+AGG 0.259778 5_2:+22035602 None:intergenic
TACACAGAATCAATTTGTTT+TGG 0.262680 5_2:-22033880 Msa0763180:CDS
ATGTAAATTCATATCCTAAT+TGG 0.263183 5_2:+22032760 None:intergenic
CTTGGTGATTGGTTTCCTCT+TGG 0.276385 5_2:-22035353 Msa0763180:CDS
TTGGTGATTGGTTTCCTCTT+GGG 0.277791 5_2:-22035352 Msa0763180:CDS
GACAGTGATGATTCTGATTC+AGG 0.278508 5_2:-22033489 Msa0763180:CDS
ATTCCGTGAATATGAGAAAA+TGG 0.282693 5_2:-22036472 Msa0763180:CDS
GGAGATATGCACTTCTTAAC+AGG 0.290366 5_2:-22035316 Msa0763180:CDS
GGATTATTTGTTGGCAGTCC+TGG 0.299371 5_2:+22033912 None:intergenic
GCTCCAGAAGCTTCTAAATA+TGG 0.300151 5_2:-22037534 Msa0763180:intron
GGAAATTGGTCGTGGGAAAA+TGG 0.302113 5_2:-22036373 Msa0763180:CDS
ATCACTGTCATTATCCACTA+TGG 0.307424 5_2:+22033503 None:intergenic
CCATAAAGTCCCTGTCTATA+AGG 0.310054 5_2:-22035585 Msa0763180:CDS
GTGCAGACTGCCCAAATGTT+AGG 0.320819 5_2:+22032720 None:intergenic
TAAGTTTGATACAAGCGATT+TGG 0.321047 5_2:-22037643 Msa0763180:CDS
TGTAGGCAAGCCCTAACATT+TGG 0.329953 5_2:-22032731 Msa0763180:three_prime_UTR
CCGTAAGGTATTAACCAATT+AGG 0.330667 5_2:-22032774 Msa0763180:three_prime_UTR
TTCTGATTCAGGAATATTTA+GGG 0.330786 5_2:-22033478 Msa0763180:CDS
GCCTCTCCGCCTTGCTGAAT+GGG 0.334178 5_2:-22036622 Msa0763180:CDS
ACGTCAGACACTTCTGGTTT+AGG 0.338162 5_2:+22033840 None:intergenic
AAAATCCAAATGATTGATTC+AGG 0.338756 5_2:-22032803 Msa0763180:three_prime_UTR
TTTACATTCATCCGTTGTTT+AGG 0.344173 5_2:-22032572 Msa0763180:three_prime_UTR
GAGAGAGGATATTACGGATA+TGG 0.346339 5_2:-22034117 Msa0763180:CDS
CTTACTTGGAAAAGGAGTTT+TGG 0.351864 5_2:-22036398 Msa0763180:CDS
TCAAGTTTAAGCTCACAATA+AGG 0.353382 5_2:+22033960 None:intergenic
CTTTGCAAAGAAGTTCTTCA+TGG 0.354153 5_2:+22035279 None:intergenic
AGCCTCTCCGCCTTGCTGAA+TGG 0.359090 5_2:-22036623 Msa0763180:CDS
AATAGACGCAAAGTTGATTT+GGG 0.363852 5_2:+22036087 None:intergenic
ATACCATATTTAGAAGCTTC+TGG 0.364051 5_2:+22037531 None:intergenic
CCTCGGACTTTGAGTCGCTT+TGG 0.366952 5_2:+22032951 None:intergenic
TTGAGTGCTTCTGTACCTGC+TGG 0.368641 5_2:-22036696 Msa0763180:CDS
GGAGAATACACAGGACATTC+TGG 0.368911 5_2:+22037603 None:intergenic
TGCTTCCTGAATCAATCATT+TGG 0.370968 5_2:+22032798 None:intergenic
AAGGAAACGTCAGACACTTC+TGG 0.371873 5_2:+22033834 None:intergenic
TATTATTTCAGAAACTTTCC+CGG 0.373608 5_2:-22036113 Msa0763180:intron
AACAGATTTGCAAGGGGAAA+TGG 0.376372 5_2:-22033101 Msa0763180:CDS
CCTTGCAAATCTGTTCTTCG+AGG 0.382466 5_2:+22033109 None:intergenic
GGAGGAATTTGAAGATCCTT+TGG 0.383247 5_2:-22037574 Msa0763180:CDS
CAATCTGAGGAGGTTAGAAA+TGG 0.383523 5_2:-22037837 Msa0763180:CDS
TCCACTATGGGCTTGATGTC+AGG 0.386848 5_2:+22033516 None:intergenic
ATTATGCTTTGCGTTGATAT+CGG 0.387143 5_2:-22038125 Msa0763180:CDS
TCCGTTGTTTAGGTCTTGTT+AGG 0.387513 5_2:-22032562 Msa0763180:three_prime_UTR
TGAGCAGGAAGATGGGATAT+TGG 0.390426 5_2:-22034075 Msa0763180:CDS
TCTTCAAATTCCTCCTTTGT+TGG 0.392588 5_2:+22037582 None:intergenic
TGGAGCCTTTGACGTTCTCT+TGG 0.392797 5_2:-22035645 Msa0763180:CDS
GGAGCCTTTGACGTTCTCTT+GGG 0.394203 5_2:-22035644 Msa0763180:CDS
ATGTCTTCCTGCCACTTACT+TGG 0.401021 5_2:-22036412 Msa0763180:CDS
AAGTTTAGAAATTGGATTAG+TGG 0.403358 5_2:-22032618 Msa0763180:three_prime_UTR
GCAAAGTTGATTTGGGTAAC+CGG 0.403678 5_2:+22036094 None:intergenic
GTTTGCTGAAACCTCTCTCT+TGG 0.406028 5_2:+22033005 None:intergenic
GAAGCGCCTTCCATTGAGAT+TGG 0.409859 5_2:-22032975 Msa0763180:CDS
GAAAAGAAATCTGAAGGTTA+TGG 0.414459 5_2:-22033427 Msa0763180:CDS
ATATTTATCACTTGATTCAC+TGG 0.418019 5_2:+22033166 None:intergenic
TATCCCTGGTCACGCAGCTT+TGG 0.422015 5_2:-22035732 Msa0763180:CDS
CCACACTCTGGATTATTTGT+TGG 0.427777 5_2:+22033903 None:intergenic
TTCAAAACATTCTGAGCAGC+AGG 0.432668 5_2:-22033403 Msa0763180:intron
GTAGGCAAGCCCTAACATTT+GGG 0.434796 5_2:-22032730 Msa0763180:three_prime_UTR
CCTAATTGGTTAATACCTTA+CGG 0.437368 5_2:+22032774 None:intergenic
ATCAGCTTGGGAACAGCAAA+TGG 0.440002 5_2:-22036293 Msa0763180:CDS
TCTATTGGAAACGTCAATTC+CGG 0.440096 5_2:-22036070 Msa0763180:intron
TTATCTGAGAGAGGATATTA+CGG 0.445667 5_2:-22034123 Msa0763180:CDS
CTGCACGGGTGGTGATCCTT+AGG 0.446893 5_2:-22032703 Msa0763180:three_prime_UTR
GATCCTTAGGTTCTCTGGCC+GGG 0.447005 5_2:-22032690 Msa0763180:three_prime_UTR
TTTGCTGAAACCTCTCTCTT+GGG 0.448471 5_2:+22033006 None:intergenic
TGGTGATTGGTTTCCTCTTG+GGG 0.449362 5_2:-22035351 Msa0763180:CDS
GTGGTGATCCTTAGGTTCTC+TGG 0.449882 5_2:-22032695 Msa0763180:three_prime_UTR
TGAAACATCTTACAGGTAGA+AGG 0.451605 5_2:-22037873 Msa0763180:intron
TTGTCAAGTGATGGAGAAGA+TGG 0.453056 5_2:-22035665 Msa0763180:CDS
TTGATACAAGCGATTTGGAT+TGG 0.454805 5_2:-22037638 Msa0763180:CDS
TGAGTGCTTCTGTACCTGCT+GGG 0.455362 5_2:-22036695 Msa0763180:CDS
AATTCCAAAGCTGCGTGACC+AGG 0.455551 5_2:+22035728 None:intergenic
AAGAGTGGATGCAGCAGAAA+AGG 0.456673 5_2:+22033815 None:intergenic
CGCAGCTTTGGAATTTGAAA+GGG 0.456897 5_2:-22035720 Msa0763180:CDS
GCTTTGCGTTGATATCGGTT+TGG 0.460073 5_2:-22038120 Msa0763180:CDS
TTTAGGTCTTGTTAGGAACA+TGG 0.460465 5_2:-22032555 Msa0763180:three_prime_UTR
GTTGGTTACTAATGAAATCA+AGG 0.462719 5_2:-22035133 Msa0763180:CDS
AAGCCTGCATGGTACGCTCT+AGG 0.463569 5_2:+22035527 None:intergenic
TGATCCTTAGGTTCTCTGGC+CGG 0.473701 5_2:-22032691 Msa0763180:three_prime_UTR
CTCTTGGGGCTATTGCAAGC+AGG 0.475256 5_2:-22035337 Msa0763180:CDS
GTTTCCAGCATTGTGCTAGT+TGG 0.477992 5_2:-22035151 Msa0763180:CDS
AAGCGCCTTCCATTGAGATT+GGG 0.478973 5_2:-22032974 Msa0763180:CDS
AAGATGTTTGAGCAGGAAGA+TGG 0.480595 5_2:-22034083 Msa0763180:CDS
TCATGTAGTTTCTAGGTACA+AGG 0.481243 5_2:+22032423 None:intergenic
TATAAGGCTGTTCAAAAGCC+AGG 0.481451 5_2:-22035569 Msa0763180:CDS
TTCTCTGCTTTAAGAGAGGA+AGG 0.482228 5_2:+22033447 None:intergenic
TCCTGCCACTTACTTGGAAA+AGG 0.482416 5_2:-22036406 Msa0763180:CDS
CACTGCATTCTTTAGGCTGA+GGG 0.482599 5_2:-22033645 Msa0763180:intron
TGCAGACTGCCCAAATGTTA+GGG 0.484313 5_2:+22032721 None:intergenic
AGAAGATTCGCATGCACTGT+TGG 0.484598 5_2:+22033593 None:intergenic
TGAATTTACATTCTTTGTGT+AGG 0.484707 5_2:-22032748 Msa0763180:three_prime_UTR
TGGAGGATCATTATTTGTAC+AGG 0.487458 5_2:-22035914 Msa0763180:intron
AGTTCTTCATGGGGCAGTAA+AGG 0.488348 5_2:+22035290 None:intergenic
GCACGAAGATATTGCAGTGC+TGG 0.492162 5_2:-22036435 Msa0763180:CDS
AACATTTGGGCAGTCTGCAC+GGG 0.492932 5_2:-22032717 Msa0763180:three_prime_UTR
TCCTGTGTATTCTCCAACAA+AGG 0.493715 5_2:-22037595 Msa0763180:CDS
TTTCAGAGAGCTGAAGCAAA+TGG 0.495918 5_2:-22033990 Msa0763180:CDS
TGCAGCAAAGATGTTTGAGC+AGG 0.497284 5_2:-22034090 Msa0763180:CDS
CTCGAAGAACAGATTTGCAA+GGG 0.497948 5_2:-22033108 Msa0763180:CDS
TAACATTTGGGCAGTCTGCA+CGG 0.498668 5_2:-22032718 Msa0763180:three_prime_UTR
GAACAGCAAATGGAATTTGA+AGG 0.498848 5_2:-22036283 Msa0763180:intron
ACGCAGCTTTGGAATTTGAA+AGG 0.502422 5_2:-22035721 Msa0763180:CDS
TTGAGAGGTTCACCTTCTTG+TGG 0.502769 5_2:-22037714 Msa0763180:CDS
TTCATTAAAACAACCCCAGC+AGG 0.503191 5_2:+22036681 None:intergenic
GTAACCAACTAGCACAATGC+TGG 0.505912 5_2:+22035147 None:intergenic
TTTGCAAAGAAGTTCTTCAT+GGG 0.510875 5_2:+22035280 None:intergenic
GAATATGCATGTGATGTTGA+TGG 0.516379 5_2:-22036342 Msa0763180:CDS
TCAGGTTCACCCAGCGAAGT+AGG 0.521169 5_2:+22032659 None:intergenic
ATCAGTAGGAGAAGTTGAAA+AGG 0.523872 5_2:+22036314 None:intergenic
ATGAATTAACATCGAAAGGA+GGG 0.525231 5_2:+22032465 None:intergenic
GATGCTTATTCATTCAAGCT+TGG 0.528112 5_2:-22035252 Msa0763180:CDS
CAGCATTCCAATGTATAGCA+TGG 0.528642 5_2:+22035959 None:intergenic
TCGCTTTGGCCCAATCTCAA+TGG 0.528894 5_2:+22032965 None:intergenic
TTCCCTAGAGCGTACCATGC+AGG 0.529080 5_2:-22035530 Msa0763180:CDS
TTAGGTCTTGTTAGGAACAT+GGG 0.529346 5_2:-22032554 Msa0763180:three_prime_UTR
CAAAGTTGATTTGGGTAACC+GGG 0.532287 5_2:+22036095 None:intergenic
TGCTGTTTAGTATGTTTGCA+TGG 0.532827 5_2:-22035941 Msa0763180:CDS
CACCCCGGCCAGAGAACCTA+AGG 0.533451 5_2:+22032687 None:intergenic
AGCCTGCATGGTACGCTCTA+GGG 0.534040 5_2:+22035528 None:intergenic
AGGTAGAGTAAGACAATCTG+AGG 0.536728 5_2:-22037850 Msa0763180:CDS
TGATTCTGTGTACCACACTC+TGG 0.536807 5_2:+22033891 None:intergenic
CTGGTTGTAAACTTGAATCC+AGG 0.537765 5_2:+22036651 None:intergenic
AAAACTTGGTATGGTATCCC+TGG 0.538981 5_2:-22035746 Msa0763180:CDS
AAGAATGAATTAACATCGAA+AGG 0.540352 5_2:+22032461 None:intergenic
CCTCGAAGAACAGATTTGCA+AGG 0.541170 5_2:-22033109 Msa0763180:CDS
CTTCTCCTACTGATCAGCTT+GGG 0.543251 5_2:-22036305 Msa0763180:CDS
ACCTGACATCAAGCCCATAG+TGG 0.543321 5_2:-22033517 Msa0763180:CDS
GAGCTTTCATGATACAAAGC+AGG 0.543891 5_2:+22033564 None:intergenic
TGCTTTGTATCATGAAAGCT+CGG 0.546043 5_2:-22033562 Msa0763180:CDS
AGCTTTGGAATTTGAAAGGG+TGG 0.546161 5_2:-22035717 Msa0763180:CDS
ACTTGTCTGAGTGGCAGCAA+TGG 0.548160 5_2:+22037773 None:intergenic
ACTTCTCCTACTGATCAGCT+TGG 0.549870 5_2:-22036306 Msa0763180:CDS
AACCATGACTGAAGCCTGCA+TGG 0.553458 5_2:+22035516 None:intergenic
TTACCATGGCGTAAGCATAC+AGG 0.555597 5_2:+22035008 None:intergenic
GCTTAGTTTCAAAGTAGTTG+TGG 0.556551 5_2:-22038048 Msa0763180:intron
AGTGTTTCTTCTCATTCGCA+TGG 0.557562 5_2:-22035101 Msa0763180:CDS
AAGGCGGAGAGGCTGCACTC+TGG 0.558918 5_2:+22036632 None:intergenic
TCACTGTCATTATCCACTAT+GGG 0.560366 5_2:+22033504 None:intergenic
TCTTGTGGCACGAGATTGCA+TGG 0.561186 5_2:-22037699 Msa0763180:CDS
TGCAATCTCGTGCCACAAGA+AGG 0.561867 5_2:+22037702 None:intergenic
AGATGTTTGAGCAGGAAGAT+GGG 0.562717 5_2:-22034082 Msa0763180:CDS
AAATCTCTTGACCTCATCTG+TGG 0.564286 5_2:-22034161 Msa0763180:CDS
GCTGAAACCTCTCTCTTGGG+TGG 0.569024 5_2:+22033009 None:intergenic
GAGCCTTTGACGTTCTCTTG+GGG 0.569053 5_2:-22035643 Msa0763180:CDS
CTGTTCCCAAGCTGATCAGT+AGG 0.569260 5_2:+22036300 None:intergenic
CCTGACCGACCTGCAAAAGT+AGG 0.570058 5_2:-22032641 Msa0763180:three_prime_UTR
TGGTCCATCAAAATATTAGG+TGG 0.570687 5_2:+22035605 None:intergenic
TACCATGCAGGCTTCAGTCA+TGG 0.571674 5_2:-22035518 Msa0763180:intron
ATAAGGCTGTTCAAAAGCCA+GGG 0.571901 5_2:-22035568 Msa0763180:CDS
AATCTGAGGAGGTTAGAAAT+GGG 0.573649 5_2:-22037836 Msa0763180:CDS
ATCCTTAGGTTCTCTGGCCG+GGG 0.576299 5_2:-22032689 Msa0763180:three_prime_UTR
AAGGTTATTACAAACTCCCC+TGG 0.576603 5_2:+22035551 None:intergenic
ATGAGATAACAAGTCTGAAG+AGG 0.577900 5_2:+22035208 None:intergenic
TTTCCCCAAGAGAACGTCAA+AGG 0.580508 5_2:+22035640 None:intergenic
AATGAATTAACATCGAAAGG+AGG 0.582016 5_2:+22032464 None:intergenic
ACAGAACCCATGCTATACAT+TGG 0.582151 5_2:-22035966 Msa0763180:CDS
TTGGTTACTAATGAAATCAA+GGG 0.584367 5_2:-22035132 Msa0763180:CDS
AGCAGAGAAAAGAAATCTGA+AGG 0.584819 5_2:-22033433 Msa0763180:CDS
TTCTGAAAGAGAACAAAGAG+TGG 0.588446 5_2:+22033800 None:intergenic
TTTGGCAGGAAATTGGTCGT+GGG 0.589186 5_2:-22036380 Msa0763180:CDS
TAGTATGTTTGCATGGCATG+TGG 0.590708 5_2:-22035934 Msa0763180:CDS
AGCATTCCAATGTATAGCAT+GGG 0.591957 5_2:+22035960 None:intergenic
ATATGAGAAAATGGCAAACA+AGG 0.593266 5_2:-22036463 Msa0763180:CDS
TGAATTAACATCGAAAGGAG+GGG 0.596572 5_2:+22032466 None:intergenic
TGAGATAACAAGTCTGAAGA+GGG 0.601071 5_2:+22035209 None:intergenic
AGCTTTCATGATACAAAGCA+GGG 0.602726 5_2:+22033565 None:intergenic
GAGTGCTTCTGTACCTGCTG+GGG 0.605225 5_2:-22036694 Msa0763180:CDS
GAGGGGAATTGTGAAGAACT+TGG 0.605479 5_2:-22033627 Msa0763180:CDS
TTTGGCCCAATCTCAATGGA+AGG 0.605929 5_2:+22032969 None:intergenic
TGATTCAGGAAGCAGCCGTA+AGG 0.606092 5_2:-22032789 Msa0763180:three_prime_UTR
ATCTTCTGCAAATAAACCAA+AGG 0.609064 5_2:+22037558 None:intergenic
TCCTTTGTTGGAGAATACAC+AGG 0.609723 5_2:+22037594 None:intergenic
CTCTGAAACATATCTGACAA+AGG 0.609736 5_2:+22034005 None:intergenic
AATCATGCAAAACATTGCCC+CGG 0.611248 5_2:+22038078 None:intergenic
AAAATTCTAGGTTTCAACTG+TGG 0.612221 5_2:-22035395 Msa0763180:intron
ATTCCAAAGCTGCGTGACCA+GGG 0.613347 5_2:+22035729 None:intergenic
CATAACAGTCACGTTTGCAA+AGG 0.613703 5_2:+22035063 None:intergenic
ATTTGGGCAGTCTGCACGGG+TGG 0.619415 5_2:-22032714 Msa0763180:three_prime_UTR
AGTGGAGGAGATGCTTTGAG+AGG 0.620104 5_2:-22037729 Msa0763180:CDS
GAATTAACATCGAAAGGAGG+GGG 0.621459 5_2:+22032467 None:intergenic
AATCTCTTGACCTCATCTGT+GGG 0.626666 5_2:-22034160 Msa0763180:CDS
GCAGGTACAGAAGCACTCAA+AGG 0.631676 5_2:+22036699 None:intergenic
TTGAAGACAGTCCTTCCTGA+AGG 0.632351 5_2:-22033221 Msa0763180:CDS
TGTGTTTGCTCCCACAGATG+AGG 0.633446 5_2:+22034150 None:intergenic
ACACACTCTTTATCTGAGAG+AGG 0.633663 5_2:-22034132 Msa0763180:CDS
TGTGTATTCTCCAACAAAGG+AGG 0.634871 5_2:-22037592 Msa0763180:CDS
CTTCAGTATCCCATTCAGCA+AGG 0.636604 5_2:+22036613 None:intergenic
GTTAGCAGCACTTGTCTGAG+TGG 0.638870 5_2:+22037764 None:intergenic
TCCCATTCAGCAAGGCGGAG+AGG 0.639564 5_2:+22036621 None:intergenic
TTTGAACAGCCTTATAGACA+GGG 0.640431 5_2:+22035576 None:intergenic
AACGTGATGAATAGAAGTGG+AGG 0.643226 5_2:-22037744 Msa0763180:CDS
AAGATCACCACCCAAGAGAG+AGG 0.646327 5_2:-22033016 Msa0763180:CDS
TCTCTGCTTTAAGAGAGGAA+GGG 0.650459 5_2:+22033448 None:intergenic
TATGTTTGCATGGCATGTGG+AGG 0.652368 5_2:-22035931 Msa0763180:CDS
GGAGCAGAGGAACAGTCATG+AGG 0.652702 5_2:+22033777 None:intergenic
CCAAAGCGACTCAAAGTCCG+AGG 0.653371 5_2:-22032951 Msa0763180:CDS
CATCCTGTATGCTTACGCCA+TGG 0.654178 5_2:-22035011 Msa0763180:intron
TCGAAGAACAGATTTGCAAG+GGG 0.659146 5_2:-22033107 Msa0763180:CDS
GAGATATGCACTTCTTAACA+GGG 0.660720 5_2:-22035315 Msa0763180:CDS
CTGCTTGCAATAGCCCCAAG+AGG 0.661556 5_2:+22035338 None:intergenic
TGCATGGTACGCTCTAGGGA+AGG 0.661692 5_2:+22035532 None:intergenic
TTGCAAAGAAGTTCTTCATG+GGG 0.664478 5_2:+22035281 None:intergenic
TAGAGTAAGACAATCTGAGG+AGG 0.665323 5_2:-22037847 Msa0763180:CDS
TATCAACTTTATGATTAACA+GGG 0.667769 5_2:+22033141 None:intergenic
GCTAACGTGATGAATAGAAG+TGG 0.674460 5_2:-22037747 Msa0763180:CDS
TCCTAACAAGACCTAAACAA+CGG 0.678244 5_2:+22032561 None:intergenic
CCAACAAATAATCCAGAGTG+TGG 0.694859 5_2:-22033903 Msa0763180:CDS
ACTGCATTCTTTAGGCTGAG+GGG 0.698405 5_2:-22033644 Msa0763180:intron
AACATCTTACAGGTAGAAGG+AGG 0.700370 5_2:-22037870 Msa0763180:intron
CAGTATCCCATTCAGCAAGG+CGG 0.708241 5_2:+22036616 None:intergenic
TAAGGCTGTTCAAAAGCCAG+GGG 0.708748 5_2:-22035567 Msa0763180:CDS
GCTTTCATGATACAAAGCAG+GGG 0.718139 5_2:+22033566 None:intergenic
AGCATTAACTATCAGCACTG+CGG 0.747153 5_2:-22035776 Msa0763180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTGATATTATTATTTATA+TGG - chr5_2:22034720-22034739 Msa0763180:intron 10.0%
!! TATTATTATTTATATGGTAA+TGG - chr5_2:22034726-22034745 Msa0763180:intron 10.0%
!!! GAATATAATATTATTTTGTT+TGG - chr5_2:22035607-22035626 Msa0763180:CDS 10.0%
!!! ATGAATTTTAATTATATTTG+AGG - chr5_2:22035820-22035839 Msa0763180:intron 10.0%
!! AAATTCAAATGAAAAAAGTT+CGG + chr5_2:22033775-22033794 None:intergenic 15.0%
!! AATATGATAAATAAATAACG+GGG + chr5_2:22034316-22034335 None:intergenic 15.0%
!! CAATATGATAAATAAATAAC+GGG + chr5_2:22034317-22034336 None:intergenic 15.0%
!! CCAATATGATAAATAAATAA+CGG + chr5_2:22034318-22034337 None:intergenic 15.0%
!! AAGTTGTTATAAAATAATCA+TGG - chr5_2:22035633-22035652 Msa0763180:CDS 15.0%
!! AAAATAATCATGGATATTAT+TGG - chr5_2:22035643-22035662 Msa0763180:CDS 15.0%
!!! GATATATTAATTTGTGATAA+TGG - chr5_2:22035893-22035912 Msa0763180:intron 15.0%
!!! CAAAAATTATTAGTTTTCAT+AGG + chr5_2:22036016-22036035 None:intergenic 15.0%
!!! TTAATATCTTGTTTGAATAT+TGG - chr5_2:22036801-22036820 Msa0763180:intron 15.0%
!!! TAATGGATAATGATGAATAT+GGG + chr5_2:22033177-22033196 None:intergenic 20.0%
!!! ATAATGGATAATGATGAATA+TGG + chr5_2:22033178-22033197 None:intergenic 20.0%
!!! TTCTGAATAAACTTGTTATT+TGG - chr5_2:22033304-22033323 Msa0763180:intron 20.0%
!!! TGTTTTGAGTTTTTTCAAAT+AGG + chr5_2:22033630-22033649 None:intergenic 20.0%
!!! ATTTGAATTTTTGATATTCC+AGG - chr5_2:22033785-22033804 Msa0763180:CDS 20.0%
!! CCGTTATTTATTTATCATAT+TGG - chr5_2:22034315-22034334 Msa0763180:intron 20.0%
!!! AAAGCATTTTAACAAAATGA+TGG - chr5_2:22034340-22034359 Msa0763180:intron 20.0%
!! ATTCGATAAGTTTATTAACA+TGG + chr5_2:22034383-22034402 None:intergenic 20.0%
!! ATTAAATATGCAACTTAAGA+AGG + chr5_2:22034698-22034717 None:intergenic 20.0%
!!! AATGCATGCAAAATTATTTT+TGG - chr5_2:22035576-22035595 Msa0763180:CDS 20.0%
!!! AAAATTATTTTTGGAAGCTT+GGG - chr5_2:22035585-22035604 Msa0763180:CDS 20.0%
!!! ATTAAAATTCATATTTGCTG+AGG + chr5_2:22035812-22035831 None:intergenic 20.0%
!! AAATGACAACTAAAAATGAA+TGG + chr5_2:22035969-22035988 None:intergenic 20.0%
!!! CATTTTTAGTTGTCATTTTA+AGG - chr5_2:22035971-22035990 Msa0763180:CDS 20.0%
!!! TTATTAGTTTTCATAGGTAT+GGG + chr5_2:22036010-22036029 None:intergenic 20.0%
!!! ATTATTAGTTTTCATAGGTA+TGG + chr5_2:22036011-22036030 None:intergenic 20.0%
!! TCAGATAAAAATAATGTCAA+GGG + chr5_2:22036072-22036091 None:intergenic 20.0%
!! ATCAGATAAAAATAATGTCA+AGG + chr5_2:22036073-22036092 None:intergenic 20.0%
!!! AAGGATATGAATACATATTT+TGG + chr5_2:22036505-22036524 None:intergenic 20.0%
!!! TTCAAAACACTTACATTTTT+GGG + chr5_2:22036773-22036792 None:intergenic 20.0%
!!! ATTCAAAACACTTACATTTT+TGG + chr5_2:22036774-22036793 None:intergenic 20.0%
!!! TAATTTTGATCTATATGAAC+AGG - chr5_2:22037271-22037290 Msa0763180:intron 20.0%
!!! AATTTTGATCTATATGAACA+GGG - chr5_2:22037272-22037291 Msa0763180:intron 20.0%
!!! TTTTTATATCTTGCTGAAAT+GGG + chr5_2:22037455-22037474 None:intergenic 20.0%
!! ATGTAAATTCATATCCTAAT+TGG + chr5_2:22037769-22037788 None:intergenic 20.0%
!! AAAGAAAGAAAGAAAAACAA+TGG + chr5_2:22038003-22038022 None:intergenic 20.0%
!!! TTCATTCTTTTTGTAGAAAT+AGG - chr5_2:22038079-22038098 Msa0763180:CDS 20.0%
!!! TTTTTATTCATGTAGTTTCT+AGG + chr5_2:22038113-22038132 None:intergenic 20.0%
!!! TAGAATTTTTGAAGCGTAAA+AGG - chr5_2:22032714-22032733 Msa0763180:three_prime_UTR 25.0%
!! ATACTTTTACCACTTCAATA+TGG - chr5_2:22033109-22033128 Msa0763180:CDS 25.0%
! ATTATCCATTATCCTTTGTT+TGG - chr5_2:22033186-22033205 Msa0763180:CDS 25.0%
! AATCATTACATCAGCAAATA+AGG + chr5_2:22033502-22033521 None:intergenic 25.0%
!! ATTTGCTGATGTAATGATTA+TGG - chr5_2:22033503-22033522 Msa0763180:CDS 25.0%
! ACAATTTGTATATAGGAAAC+CGG + chr5_2:22033544-22033563 None:intergenic 25.0%
! CACAACTACAATTTGTATAT+AGG + chr5_2:22033551-22033570 None:intergenic 25.0%
! TATAAAAGAGACACTAGTAA+AGG + chr5_2:22034274-22034293 None:intergenic 25.0%
! TATTATTTCAGAAACTTTCC+CGG - chr5_2:22034413-22034432 Msa0763180:intron 25.0%
!! ATTCTTTTTGTGTCTTACAT+TGG - chr5_2:22034519-22034538 Msa0763180:intron 25.0%
!! TTCTTTTTGTGTCTTACATT+GGG - chr5_2:22034520-22034539 Msa0763180:intron 25.0%
!!! ATTTCCACCTAATATTTTGA+TGG - chr5_2:22034917-22034936 Msa0763180:intron 25.0%
! TTATGGTCCATCAAAATATT+AGG + chr5_2:22034927-22034946 None:intergenic 25.0%
! ATGCATTTAATGTGTAGTAT+CGG + chr5_2:22035082-22035101 None:intergenic 25.0%
! CGTATCTTCAATAAAATTCT+AGG - chr5_2:22035119-22035138 Msa0763180:CDS 25.0%
! TTGGTTACTAATGAAATCAA+GGG - chr5_2:22035394-22035413 Msa0763180:intron 25.0%
!!! CAAAATTATTTTTGGAAGCT+TGG - chr5_2:22035584-22035603 Msa0763180:CDS 25.0%
!!! TTCTGGAATTCTAAATCATA+TGG - chr5_2:22035667-22035686 Msa0763180:CDS 25.0%
! CATTGAAAAACTATGTTAGA+AGG + chr5_2:22035728-22035747 None:intergenic 25.0%
! GAGGATTTAATATATTTGCT+GGG + chr5_2:22035793-22035812 None:intergenic 25.0%
! TGAGGATTTAATATATTTGC+TGG + chr5_2:22035794-22035813 None:intergenic 25.0%
! TAAGATAACGACAAAGTAAT+TGG + chr5_2:22035934-22035953 None:intergenic 25.0%
!!! TATTAGTTTTCATAGGTATG+GGG + chr5_2:22036009-22036028 None:intergenic 25.0%
! ATAAAAATAATGTCAAGGGT+CGG + chr5_2:22036068-22036087 None:intergenic 25.0%
!!! ATTGTTTTGTCAATAATACC+CGG + chr5_2:22036111-22036130 None:intergenic 25.0%
!! TTTGAAACTGAAAAGCAAAT+AGG - chr5_2:22036150-22036169 Msa0763180:intron 25.0%
! TACAAAAGCAACAAGTAAAA+AGG - chr5_2:22036186-22036205 Msa0763180:intron 25.0%
! AACAAGTAAAAAGGAAGAAA+GGG - chr5_2:22036195-22036214 Msa0763180:intron 25.0%
! ATTATCTAAATTCTAGACCA+TGG - chr5_2:22036233-22036252 Msa0763180:intron 25.0%
! TTATCTAAATTCTAGACCAT+GGG - chr5_2:22036234-22036253 Msa0763180:intron 25.0%
!!! ATACATATTTTGGTCACTTT+TGG + chr5_2:22036495-22036514 None:intergenic 25.0%
!! ATTGAATTTTATACAACTCC+AGG - chr5_2:22036596-22036615 Msa0763180:CDS 25.0%
!!! TACACAGAATCAATTTGTTT+TGG - chr5_2:22036646-22036665 Msa0763180:CDS 25.0%
!!! ACACAGAATCAATTTGTTTT+GGG - chr5_2:22036647-22036666 Msa0763180:CDS 25.0%
! ATTCTGATTCAGGAATATTT+AGG - chr5_2:22037047-22037066 Msa0763180:intron 25.0%
! TTCTGATTCAGGAATATTTA+GGG - chr5_2:22037048-22037067 Msa0763180:intron 25.0%
! TTATGTAAGATAGAGAATGT+TGG + chr5_2:22037241-22037260 None:intergenic 25.0%
! ATATTTATCACTTGATTCAC+TGG + chr5_2:22037363-22037382 None:intergenic 25.0%
!! CTTTTTATATCTTGCTGAAA+TGG + chr5_2:22037456-22037475 None:intergenic 25.0%
!!! AGTTGCCTTTTGAAAATATT+TGG - chr5_2:22037647-22037666 Msa0763180:CDS 25.0%
!! ACTCTCCAAATATTTTCAAA+AGG + chr5_2:22037655-22037674 None:intergenic 25.0%
!!! CTAACTTCATTTTAGCTAAT+GGG - chr5_2:22037684-22037703 Msa0763180:CDS 25.0%
!! AAAATCCAAATGATTGATTC+AGG - chr5_2:22037723-22037742 Msa0763180:CDS 25.0%
! TGAATTTACATTCTTTGTGT+AGG - chr5_2:22037778-22037797 Msa0763180:CDS 25.0%
! AAAGTAGGAAGTTTAGAAAT+TGG - chr5_2:22037900-22037919 Msa0763180:intron 25.0%
!! AAGTTTAGAAATTGGATTAG+TGG - chr5_2:22037908-22037927 Msa0763180:intron 25.0%
! AAAGAAAGAAAAACAATGGA+GGG + chr5_2:22037999-22038018 None:intergenic 25.0%
! AAGAATGAATTAACATCGAA+AGG + chr5_2:22038068-22038087 None:intergenic 25.0%
! TTCATTTTCCAAAGAATCAC+CGG - chr5_2:22032429-22032448 Msa0763180:three_prime_UTR 30.0%
! TGTTTCAGTTTGTTCATTGT+TGG - chr5_2:22032515-22032534 Msa0763180:three_prime_UTR 30.0%
! ACATGCAAGGATAATTTTGA+AGG + chr5_2:22032605-22032624 None:intergenic 30.0%
GTAAGATGTTTCACATTTCA+CGG + chr5_2:22032646-22032665 None:intergenic 30.0%
TGAAATGTGAAACATCTTAC+AGG - chr5_2:22032646-22032665 Msa0763180:three_prime_UTR 30.0%
TAAGTTTGATACAAGCGATT+TGG - chr5_2:22032883-22032902 Msa0763180:three_prime_UTR 30.0%
ATCTTCTGCAAATAAACCAA+AGG + chr5_2:22032971-22032990 None:intergenic 30.0%
ATACCATATTTAGAAGCTTC+TGG + chr5_2:22032998-22033017 None:intergenic 30.0%
TAGTTAATTAGTAAACCCTG+TGG - chr5_2:22033055-22033074 Msa0763180:CDS 30.0%
CTAATCCAAACAAAGGATAA+TGG + chr5_2:22033194-22033213 None:intergenic 30.0%
ATGGAAACTAATCCAAACAA+AGG + chr5_2:22033201-22033220 None:intergenic 30.0%
TAATTGAAGCTACTATACGA+TGG + chr5_2:22033220-22033239 None:intergenic 30.0%
CGCAAGAATTTCAATGTTTA+TGG - chr5_2:22033266-22033285 Msa0763180:intron 30.0%
AAATAAGGAACTTCTTGCAA+AGG + chr5_2:22033487-22033506 None:intergenic 30.0%
GTAATGATTATGGTCTTTGA+TGG - chr5_2:22033513-22033532 Msa0763180:CDS 30.0%
GTTTCACGATAGAAAATGAA+TGG + chr5_2:22033603-22033622 None:intergenic 30.0%
AACTCAATAGACTTACTAAC+AGG - chr5_2:22033662-22033681 Msa0763180:intron 30.0%
AATAGACTTACTAACAGGTA+TGG - chr5_2:22033667-22033686 Msa0763180:intron 30.0%
AATTTACCATGTCCTCTTTA+CGG - chr5_2:22033711-22033730 Msa0763180:intron 30.0%
GAAATAATCTTGCATATACC+TGG + chr5_2:22033806-22033825 None:intergenic 30.0%
! AAAGTCACATTTTTCATGAG+TGG - chr5_2:22033938-22033957 Msa0763180:CDS 30.0%
ATTCCGTGAATATGAGAAAA+TGG - chr5_2:22034054-22034073 Msa0763180:CDS 30.0%
!!! TTGCCATTTTCTCATATTCA+CGG + chr5_2:22034060-22034079 None:intergenic 30.0%
ATATGAGAAAATGGCAAACA+AGG - chr5_2:22034063-22034082 Msa0763180:CDS 30.0%
! AATAGACGCAAAGTTGATTT+GGG + chr5_2:22034442-22034461 None:intergenic 30.0%
GACATAAGAAATTGTCATAC+CGG + chr5_2:22034478-22034497 None:intergenic 30.0%
! ACTGATATTTTGTCAAGTGA+TGG - chr5_2:22034852-22034871 Msa0763180:intron 30.0%
TGCATTTAATGTGTAGTATC+GGG + chr5_2:22035081-22035100 None:intergenic 30.0%
AAAATTCTAGGTTTCAACTG+TGG - chr5_2:22035131-22035150 Msa0763180:CDS 30.0%
TTTGCAAAGAAGTTCTTCAT+GGG + chr5_2:22035249-22035268 None:intergenic 30.0%
GTTGGTTACTAATGAAATCA+AGG - chr5_2:22035393-22035412 Msa0763180:intron 30.0%
!! TCATGGATATTATTGGTTTC+TGG - chr5_2:22035650-22035669 Msa0763180:CDS 30.0%
CATACCAAAACTAACATACT+GGG + chr5_2:22035871-22035890 None:intergenic 30.0%
ACATACCAAAACTAACATAC+TGG + chr5_2:22035872-22035891 None:intergenic 30.0%
!!! ATTAGTTTTCATAGGTATGG+GGG + chr5_2:22036008-22036027 None:intergenic 30.0%
CAACAAGTAAAAAGGAAGAA+AGG - chr5_2:22036194-22036213 Msa0763180:intron 30.0%
TTTGTCACAAATTTATCCCA+TGG + chr5_2:22036253-22036272 None:intergenic 30.0%
TTATCTGAGAGAGGATATTA+CGG - chr5_2:22036403-22036422 Msa0763180:CDS 30.0%
TCAAGTTTAAGCTCACAATA+AGG + chr5_2:22036569-22036588 None:intergenic 30.0%
!!! CACAGAATCAATTTGTTTTG+GGG - chr5_2:22036648-22036667 Msa0763180:CDS 30.0%
GAAAAGAAATCTGAAGGTTA+TGG - chr5_2:22037099-22037118 Msa0763180:intron 30.0%
TCAGCAAGATATAAAAAGTC+AGG - chr5_2:22037458-22037477 Msa0763180:intron 30.0%
ATATAAAAAGTCAGGCAATG+AGG - chr5_2:22037466-22037485 Msa0763180:intron 30.0%
!!! GCTAACTTCATTTTAGCTAA+TGG - chr5_2:22037683-22037702 Msa0763180:CDS 30.0%
CCTAATTGGTTAATACCTTA+CGG + chr5_2:22037755-22037774 None:intergenic 30.0%
TTTACATTCATCCGTTGTTT+AGG - chr5_2:22037954-22037973 Msa0763180:intron 30.0%
GAAAGAAAGAAAAACAATGG+AGG + chr5_2:22038000-22038019 None:intergenic 30.0%
ATGAATTAACATCGAAAGGA+GGG + chr5_2:22038064-22038083 None:intergenic 30.0%
AATGAATTAACATCGAAAGG+AGG + chr5_2:22038065-22038084 None:intergenic 30.0%
! TCATTTTCCAAAGAATCACC+GGG - chr5_2:22032430-22032449 Msa0763180:three_prime_UTR 35.0%
GCTTAGTTTCAAAGTAGTTG+TGG - chr5_2:22032478-22032497 Msa0763180:three_prime_UTR 35.0%
TTGGAATATACTCACATGCA+AGG + chr5_2:22032618-22032637 None:intergenic 35.0%
TTCACATTTCACGGTTAGAT+TGG + chr5_2:22032637-22032656 None:intergenic 35.0%
TGAAACATCTTACAGGTAGA+AGG - chr5_2:22032653-22032672 Msa0763180:three_prime_UTR 35.0%
AATCTGAGGAGGTTAGAAAT+GGG - chr5_2:22032690-22032709 Msa0763180:three_prime_UTR 35.0%
!!! ATCCAGATGTGTTTTTCAAG+CGG - chr5_2:22032852-22032871 Msa0763180:three_prime_UTR 35.0%
! TTGATACAAGCGATTTGGAT+TGG - chr5_2:22032888-22032907 Msa0763180:three_prime_UTR 35.0%
TCTTCAAATTCCTCCTTTGT+TGG + chr5_2:22032947-22032966 None:intergenic 35.0%
AATATGGTATGTATCCGTGT+TGG - chr5_2:22033008-22033027 Msa0763180:CDS 35.0%
! TACCACTTCAATATGGCTTT+TGG - chr5_2:22033116-22033135 Msa0763180:CDS 35.0%
! ACCACTTCAATATGGCTTTT+GGG - chr5_2:22033117-22033136 Msa0763180:CDS 35.0%
! TCGTAAAGTGTTTCTCAAGA+AGG - chr5_2:22033402-22033421 Msa0763180:intron 35.0%
GCAAAAATAGAGAGCTAATG+TGG + chr5_2:22033432-22033451 None:intergenic 35.0%
! TCACATTTTTCATGAGTGGA+AGG - chr5_2:22033942-22033961 Msa0763180:CDS 35.0%
! AAACTCCTTTTCCAAGTAAG+TGG + chr5_2:22034128-22034147 None:intergenic 35.0%
! CTTACTTGGAAAAGGAGTTT+TGG - chr5_2:22034128-22034147 Msa0763180:CDS 35.0%
GAATATGCATGTGATGTTGA+TGG - chr5_2:22034184-22034203 Msa0763180:intron 35.0%
ATCAGTAGGAGAAGTTGAAA+AGG + chr5_2:22034215-22034234 None:intergenic 35.0%
GAACAGCAAATGGAATTTGA+AGG - chr5_2:22034243-22034262 Msa0763180:intron 35.0%
! CAATAGACGCAAAGTTGATT+TGG + chr5_2:22034443-22034462 None:intergenic 35.0%
CAAATCAACTTTGCGTCTAT+TGG - chr5_2:22034441-22034460 Msa0763180:intron 35.0%
TCTATTGGAAACGTCAATTC+CGG - chr5_2:22034456-22034475 Msa0763180:intron 35.0%
TTACATTGGGCTGTATTTCA+GGG - chr5_2:22034533-22034552 Msa0763180:intron 35.0%
AGCATTCCAATGTATAGCAT+GGG + chr5_2:22034569-22034588 None:intergenic 35.0%
! TGCTGTTTAGTATGTTTGCA+TGG - chr5_2:22034585-22034604 Msa0763180:intron 35.0%
TGGAGGATCATTATTTGTAC+AGG - chr5_2:22034612-22034631 Msa0763180:intron 35.0%
TGGTCCATCAAAATATTAGG+TGG + chr5_2:22034924-22034943 None:intergenic 35.0%
! TTTGAACAGCCTTATAGACA+GGG + chr5_2:22034953-22034972 None:intergenic 35.0%
!! TTTTGAACAGCCTTATAGAC+AGG + chr5_2:22034954-22034973 None:intergenic 35.0%
!! TGAATTTTGCACTTGGTGAT+TGG - chr5_2:22035162-22035181 Msa0763180:CDS 35.0%
GAGATATGCACTTCTTAACA+GGG - chr5_2:22035211-22035230 Msa0763180:CDS 35.0%
TTGCAAAGAAGTTCTTCATG+GGG + chr5_2:22035248-22035267 None:intergenic 35.0%
CTTTGCAAAGAAGTTCTTCA+TGG + chr5_2:22035250-22035269 None:intergenic 35.0%
GATGCTTATTCATTCAAGCT+TGG - chr5_2:22035274-22035293 Msa0763180:CDS 35.0%
TGAGATAACAAGTCTGAAGA+GGG + chr5_2:22035320-22035339 None:intergenic 35.0%
ATGAGATAACAAGTCTGAAG+AGG + chr5_2:22035321-22035340 None:intergenic 35.0%
ATGCATTGAAACACACTCTT+AGG + chr5_2:22035563-22035582 None:intergenic 35.0%
TGTTAGAAGGAAGTTATAGC+TGG + chr5_2:22035715-22035734 None:intergenic 35.0%
TGATAACCTATCTCTTTCTC+CGG - chr5_2:22036089-22036108 Msa0763180:CDS 35.0%
!! CTCTGAAACATATCTGACAA+AGG + chr5_2:22036524-22036543 None:intergenic 35.0%
! TTCTGAAAGAGAACAAAGAG+TGG + chr5_2:22036729-22036748 None:intergenic 35.0%
CAACTAACACTGCATTCTTT+AGG - chr5_2:22036874-22036893 Msa0763180:intron 35.0%
AGCTTTCATGATACAAAGCA+GGG + chr5_2:22036964-22036983 None:intergenic 35.0%
TGCTTTGTATCATGAAAGCT+CGG - chr5_2:22036964-22036983 Msa0763180:intron 35.0%
TCACTGTCATTATCCACTAT+GGG + chr5_2:22037025-22037044 None:intergenic 35.0%
ATCACTGTCATTATCCACTA+TGG + chr5_2:22037026-22037045 None:intergenic 35.0%
!!! TCTTTTCTCTGCTTTAAGAG+AGG + chr5_2:22037086-22037105 None:intergenic 35.0%
AGCAGAGAAAAGAAATCTGA+AGG - chr5_2:22037093-22037112 Msa0763180:intron 35.0%
CTAAACACAAACAGAATCTC+TGG + chr5_2:22037199-22037218 None:intergenic 35.0%
TGTTTGTGTTTAGCGATTCT+TGG - chr5_2:22037206-22037225 Msa0763180:intron 35.0%
TCTCTATGCCCAAAAATGAA+GGG + chr5_2:22037601-22037620 None:intergenic 35.0%
TGCTTCCTGAATCAATCATT+TGG + chr5_2:22037731-22037750 None:intergenic 35.0%
! CCGTAAGGTATTAACCAATT+AGG - chr5_2:22037752-22037771 Msa0763180:CDS 35.0%
!! TCTAAACTTCCTACTTTTGC+AGG + chr5_2:22037897-22037916 None:intergenic 35.0%
TCCTAACAAGACCTAAACAA+CGG + chr5_2:22037968-22037987 None:intergenic 35.0%
!! TTTAGGTCTTGTTAGGAACA+TGG - chr5_2:22037971-22037990 Msa0763180:intron 35.0%
!! TTAGGTCTTGTTAGGAACAT+GGG - chr5_2:22037972-22037991 Msa0763180:intron 35.0%
TGAATTAACATCGAAAGGAG+GGG + chr5_2:22038063-22038082 None:intergenic 35.0%
! TCATGTAGTTTCTAGGTACA+AGG + chr5_2:22038106-22038125 None:intergenic 35.0%
! CATTTTCCAAAGAATCACCG+GGG - chr5_2:22032431-22032450 Msa0763180:three_prime_UTR 40.0%
AATCATGCAAAACATTGCCC+CGG + chr5_2:22032451-22032470 None:intergenic 40.0%
AACATCTTACAGGTAGAAGG+AGG - chr5_2:22032656-22032675 Msa0763180:three_prime_UTR 40.0%
AGGTAGAGTAAGACAATCTG+AGG - chr5_2:22032676-22032695 Msa0763180:three_prime_UTR 40.0%
TAGAGTAAGACAATCTGAGG+AGG - chr5_2:22032679-22032698 Msa0763180:three_prime_UTR 40.0%
CAATCTGAGGAGGTTAGAAA+TGG - chr5_2:22032689-22032708 Msa0763180:three_prime_UTR 40.0%
GCTAACGTGATGAATAGAAG+TGG - chr5_2:22032779-22032798 Msa0763180:three_prime_UTR 40.0%
AACGTGATGAATAGAAGTGG+AGG - chr5_2:22032782-22032801 Msa0763180:three_prime_UTR 40.0%
TTCCGCTTGAAAAACACATC+TGG + chr5_2:22032857-22032876 None:intergenic 40.0%
!!! AGATGTGTTTTTCAAGCGGA+AGG - chr5_2:22032856-22032875 Msa0763180:three_prime_UTR 40.0%
TCCTGTGTATTCTCCAACAA+AGG - chr5_2:22032931-22032950 Msa0763180:CDS 40.0%
TCCTTTGTTGGAGAATACAC+AGG + chr5_2:22032935-22032954 None:intergenic 40.0%
TGTGTATTCTCCAACAAAGG+AGG - chr5_2:22032934-22032953 Msa0763180:CDS 40.0%
GGAGGAATTTGAAGATCCTT+TGG - chr5_2:22032952-22032971 Msa0763180:CDS 40.0%
GCTCCAGAAGCTTCTAAATA+TGG - chr5_2:22032992-22033011 Msa0763180:CDS 40.0%
ATCAGTGCAAACTACCAACA+CGG + chr5_2:22033025-22033044 None:intergenic 40.0%
GTGCATATGTTAATGCCACA+GGG + chr5_2:22033073-22033092 None:intergenic 40.0%
ACCCAAAAGCCATATTGAAG+TGG + chr5_2:22033121-22033140 None:intergenic 40.0%
!! TGGCTTTTGGGTGTGTTTTT+AGG - chr5_2:22033129-22033148 Msa0763180:CDS 40.0%
!! GGCTTTTGGGTGTGTTTTTA+GGG - chr5_2:22033130-22033149 Msa0763180:CDS 40.0%
AAGGAACTTCTTGCAAAGGT+CGG + chr5_2:22033483-22033502 None:intergenic 40.0%
CATCTATCCTTTCCGTAAAG+AGG + chr5_2:22033726-22033745 None:intergenic 40.0%
TTCATTAAAACAACCCCAGC+AGG + chr5_2:22033848-22033867 None:intergenic 40.0%
!!! TGCTGGGGTTGTTTTAATGA+AGG - chr5_2:22033847-22033866 Msa0763180:CDS 40.0%
!! GTTTTAATGAAGGAGCAACC+TGG - chr5_2:22033857-22033876 Msa0763180:CDS 40.0%
CTGGTTGTAAACTTGAATCC+AGG + chr5_2:22033878-22033897 None:intergenic 40.0%
!! AAGGAGTTTTGGCAGGAAAT+TGG - chr5_2:22034139-22034158 Msa0763180:CDS 40.0%
!! CAAAGTTGATTTGGGTAACC+GGG + chr5_2:22034434-22034453 None:intergenic 40.0%
!! GCAAAGTTGATTTGGGTAAC+CGG + chr5_2:22034435-22034454 None:intergenic 40.0%
CTTACATTGGGCTGTATTTC+AGG - chr5_2:22034532-22034551 Msa0763180:intron 40.0%
ACAGAACCCATGCTATACAT+TGG - chr5_2:22034560-22034579 Msa0763180:intron 40.0%
CAGCATTCCAATGTATAGCA+TGG + chr5_2:22034570-22034589 None:intergenic 40.0%
TAGTATGTTTGCATGGCATG+TGG - chr5_2:22034592-22034611 Msa0763180:intron 40.0%
AGCATTAACTATCAGCACTG+CGG - chr5_2:22034750-22034769 Msa0763180:intron 40.0%
AAAACTTGGTATGGTATCCC+TGG - chr5_2:22034780-22034799 Msa0763180:intron 40.0%
!! ACGCAGCTTTGGAATTTGAA+AGG - chr5_2:22034805-22034824 Msa0763180:intron 40.0%
!! CGCAGCTTTGGAATTTGAAA+GGG - chr5_2:22034806-22034825 Msa0763180:intron 40.0%
!! AGCTTTGGAATTTGAAAGGG+TGG - chr5_2:22034809-22034828 Msa0763180:intron 40.0%
! TTGTCAAGTGATGGAGAAGA+TGG - chr5_2:22034861-22034880 Msa0763180:intron 40.0%
CCTTATAGACAGGGACTTTA+TGG + chr5_2:22034944-22034963 None:intergenic 40.0%
CCATAAAGTCCCTGTCTATA+AGG - chr5_2:22034941-22034960 Msa0763180:intron 40.0%
TATAAGGCTGTTCAAAAGCC+AGG - chr5_2:22034957-22034976 Msa0763180:intron 40.0%
ATAAGGCTGTTCAAAAGCCA+GGG - chr5_2:22034958-22034977 Msa0763180:intron 40.0%
AAGGTTATTACAAACTCCCC+TGG + chr5_2:22034978-22034997 None:intergenic 40.0%
! GAAGCAGTGAATTTTGCACT+TGG - chr5_2:22035155-22035174 Msa0763180:CDS 40.0%
!! TTGGTGATTGGTTTCCTCTT+GGG - chr5_2:22035174-22035193 Msa0763180:CDS 40.0%
GGAGATATGCACTTCTTAAC+AGG - chr5_2:22035210-22035229 Msa0763180:CDS 40.0%
AGTGTTTCTTCTCATTCGCA+TGG - chr5_2:22035425-22035444 Msa0763180:intron 40.0%
CATAACAGTCACGTTTGCAA+AGG + chr5_2:22035466-22035485 None:intergenic 40.0%
CCAAAACTAACATACTGGGA+GGG + chr5_2:22035867-22035886 None:intergenic 40.0%
ACCAAAACTAACATACTGGG+AGG + chr5_2:22035868-22035887 None:intergenic 40.0%
AACGACAAAGTAATTGGCCA+CGG + chr5_2:22035928-22035947 None:intergenic 40.0%
GATAACCTATCTCTTTCTCC+GGG - chr5_2:22036090-22036109 Msa0763180:CDS 40.0%
TAATACCCGGAGAAAGAGAT+AGG + chr5_2:22036098-22036117 None:intergenic 40.0%
AAATCTCTTGACCTCATCTG+TGG - chr5_2:22036365-22036384 Msa0763180:CDS 40.0%
AATCTCTTGACCTCATCTGT+GGG - chr5_2:22036366-22036385 Msa0763180:CDS 40.0%
ACACACTCTTTATCTGAGAG+AGG - chr5_2:22036394-22036413 Msa0763180:CDS 40.0%
GAGAGAGGATATTACGGATA+TGG - chr5_2:22036409-22036428 Msa0763180:CDS 40.0%
AAGATGTTTGAGCAGGAAGA+TGG - chr5_2:22036443-22036462 Msa0763180:CDS 40.0%
AGATGTTTGAGCAGGAAGAT+GGG - chr5_2:22036444-22036463 Msa0763180:CDS 40.0%
TTTCAGAGAGCTGAAGCAAA+TGG - chr5_2:22036536-22036555 Msa0763180:intron 40.0%
CCACACTCTGGATTATTTGT+TGG + chr5_2:22036626-22036645 None:intergenic 40.0%
CCAACAAATAATCCAGAGTG+TGG - chr5_2:22036623-22036642 Msa0763180:CDS 40.0%
!! ACTTACATTTTTGGGAGCAG+AGG + chr5_2:22036765-22036784 None:intergenic 40.0%
! CTGTTTAAAACCTCATGCAG+TGG + chr5_2:22036842-22036861 None:intergenic 40.0%
GCTTTCATGATACAAAGCAG+GGG + chr5_2:22036963-22036982 None:intergenic 40.0%
GAGCTTTCATGATACAAAGC+AGG + chr5_2:22036965-22036984 None:intergenic 40.0%
GACAGTGATGATTCTGATTC+AGG - chr5_2:22037037-22037056 Msa0763180:intron 40.0%
!! TCTCTGCTTTAAGAGAGGAA+GGG + chr5_2:22037081-22037100 None:intergenic 40.0%
!! TTCTCTGCTTTAAGAGAGGA+AGG + chr5_2:22037082-22037101 None:intergenic 40.0%
TTCAAAACATTCTGAGCAGC+AGG - chr5_2:22037123-22037142 Msa0763180:intron 40.0%
TCTCTGGCAGATATACATGA+TGG + chr5_2:22037183-22037202 None:intergenic 40.0%
CTCGAAGAACAGATTTGCAA+GGG - chr5_2:22037418-22037437 Msa0763180:intron 40.0%
TCGAAGAACAGATTTGCAAG+GGG - chr5_2:22037419-22037438 Msa0763180:intron 40.0%
AACAGATTTGCAAGGGGAAA+TGG - chr5_2:22037425-22037444 Msa0763180:intron 40.0%
TTTGCTGAAACCTCTCTCTT+GGG + chr5_2:22037523-22037542 None:intergenic 40.0%
CTCTCTATGCCCAAAAATGA+AGG + chr5_2:22037602-22037621 None:intergenic 40.0%
!! AACTTCCTACTTTTGCAGGT+CGG + chr5_2:22037893-22037912 None:intergenic 40.0%
!! TCCGTTGTTTAGGTCTTGTT+AGG - chr5_2:22037964-22037983 Msa0763180:intron 40.0%
GAATTAACATCGAAAGGAGG+GGG + chr5_2:22038062-22038081 None:intergenic 40.0%
! GCTTTGCGTTGATATCGGTT+TGG - chr5_2:22032406-22032425 Msa0763180:three_prime_UTR 45.0%
TTGAGAGGTTCACCTTCTTG+TGG - chr5_2:22032812-22032831 Msa0763180:three_prime_UTR 45.0%
!!! TGTGTTTTTCAAGCGGAAGG+TGG - chr5_2:22032859-22032878 Msa0763180:three_prime_UTR 45.0%
GGAGAATACACAGGACATTC+TGG + chr5_2:22032926-22032945 None:intergenic 45.0%
CGTGCATATGTTAATGCCAC+AGG + chr5_2:22033074-22033093 None:intergenic 45.0%
!! ATGGTCTTTGATGGCGTTTC+CGG - chr5_2:22033522-22033541 Msa0763180:CDS 45.0%
ACCATGTCCTCTTTACGGAA+AGG - chr5_2:22033716-22033735 Msa0763180:intron 45.0%
TCCTTTCCGTAAAGAGGACA+TGG + chr5_2:22033720-22033739 None:intergenic 45.0%
CTTCAGTATCCCATTCAGCA+AGG + chr5_2:22033916-22033935 None:intergenic 45.0%
! ATGTCTTCCTGCCACTTACT+TGG - chr5_2:22034114-22034133 Msa0763180:CDS 45.0%
! TCCTGCCACTTACTTGGAAA+AGG - chr5_2:22034120-22034139 Msa0763180:CDS 45.0%
! TCCTTTTCCAAGTAAGTGGC+AGG + chr5_2:22034124-22034143 None:intergenic 45.0%
!! CTTGGAAAAGGAGTTTTGGC+AGG - chr5_2:22034132-22034151 Msa0763180:CDS 45.0%
! TTTTGGCAGGAAATTGGTCG+TGG - chr5_2:22034145-22034164 Msa0763180:CDS 45.0%
TTTGGCAGGAAATTGGTCGT+GGG - chr5_2:22034146-22034165 Msa0763180:CDS 45.0%
GGAAATTGGTCGTGGGAAAA+TGG - chr5_2:22034153-22034172 Msa0763180:CDS 45.0%
ACTTCTCCTACTGATCAGCT+TGG - chr5_2:22034220-22034239 Msa0763180:intron 45.0%
CTTCTCCTACTGATCAGCTT+GGG - chr5_2:22034221-22034240 Msa0763180:intron 45.0%
ATCAGCTTGGGAACAGCAAA+TGG - chr5_2:22034233-22034252 Msa0763180:intron 45.0%
TATGTTTGCATGGCATGTGG+AGG - chr5_2:22034595-22034614 Msa0763180:intron 45.0%
! GGAGCGTCAAAAACTTGGTA+TGG - chr5_2:22034771-22034790 Msa0763180:intron 45.0%
TTTCCCCAAGAGAACGTCAA+AGG + chr5_2:22034889-22034908 None:intergenic 45.0%
TAAGGCTGTTCAAAAGCCAG+GGG - chr5_2:22034959-22034978 Msa0763180:intron 45.0%
!! CTTGGTGATTGGTTTCCTCT+TGG - chr5_2:22035173-22035192 Msa0763180:CDS 45.0%
!! TGGTGATTGGTTTCCTCTTG+GGG - chr5_2:22035175-22035194 Msa0763180:CDS 45.0%
AGTTCTTCATGGGGCAGTAA+AGG + chr5_2:22035239-22035258 None:intergenic 45.0%
GTTTCCAGCATTGTGCTAGT+TGG - chr5_2:22035375-22035394 Msa0763180:CDS 45.0%
GTAACCAACTAGCACAATGC+TGG + chr5_2:22035382-22035401 None:intergenic 45.0%
TTACCATGGCGTAAGCATAC+AGG + chr5_2:22035521-22035540 None:intergenic 45.0%
!! CCCTCCCAGTATGTTAGTTT+TGG - chr5_2:22035864-22035883 Msa0763180:intron 45.0%
ACGACAAAGTAATTGGCCAC+GGG + chr5_2:22035927-22035946 None:intergenic 45.0%
TGCAGCAAAGATGTTTGAGC+AGG - chr5_2:22036436-22036455 Msa0763180:CDS 45.0%
TGAGCAGGAAGATGGGATAT+TGG - chr5_2:22036451-22036470 Msa0763180:CDS 45.0%
! GGATTATTTGTTGGCAGTCC+TGG + chr5_2:22036617-22036636 None:intergenic 45.0%
TGATTCTGTGTACCACACTC+TGG + chr5_2:22036638-22036657 None:intergenic 45.0%
!! ACGTCAGACACTTCTGGTTT+AGG + chr5_2:22036689-22036708 None:intergenic 45.0%
AAGGAAACGTCAGACACTTC+TGG + chr5_2:22036695-22036714 None:intergenic 45.0%
AAGAGTGGATGCAGCAGAAA+AGG + chr5_2:22036714-22036733 None:intergenic 45.0%
ACACTGCATTCTTTAGGCTG+AGG - chr5_2:22036880-22036899 Msa0763180:intron 45.0%
CACTGCATTCTTTAGGCTGA+GGG - chr5_2:22036881-22036900 Msa0763180:intron 45.0%
ACTGCATTCTTTAGGCTGAG+GGG - chr5_2:22036882-22036901 Msa0763180:intron 45.0%
GAGGGGAATTGTGAAGAACT+TGG - chr5_2:22036899-22036918 Msa0763180:intron 45.0%
AGAAGATTCGCATGCACTGT+TGG + chr5_2:22036936-22036955 None:intergenic 45.0%
TTGAAGACAGTCCTTCCTGA+AGG - chr5_2:22037305-22037324 Msa0763180:intron 45.0%
!!! TGCTGCTTTTTCCTTCAGGA+AGG + chr5_2:22037319-22037338 None:intergenic 45.0%
TTCCTGAAGGAAAAAGCAGC+AGG - chr5_2:22037318-22037337 Msa0763180:intron 45.0%
CCTTGCAAATCTGTTCTTCG+AGG + chr5_2:22037420-22037439 None:intergenic 45.0%
CCTCGAAGAACAGATTTGCA+AGG - chr5_2:22037417-22037436 Msa0763180:intron 45.0%
! GTTTGCTGAAACCTCTCTCT+TGG + chr5_2:22037524-22037543 None:intergenic 45.0%
AAGCGCCTTCCATTGAGATT+GGG - chr5_2:22037552-22037571 Msa0763180:CDS 45.0%
TTTGGCCCAATCTCAATGGA+AGG + chr5_2:22037560-22037579 None:intergenic 45.0%
TGTAGGCAAGCCCTAACATT+TGG - chr5_2:22037795-22037814 Msa0763180:CDS 45.0%
GTAGGCAAGCCCTAACATTT+GGG - chr5_2:22037796-22037815 Msa0763180:CDS 45.0%
TGCAGACTGCCCAAATGTTA+GGG + chr5_2:22037808-22037827 None:intergenic 45.0%
TAACATTTGGGCAGTCTGCA+CGG - chr5_2:22037808-22037827 Msa0763180:CDS 45.0%
! GGTGTTTTTCCTACTTCGCT+GGG - chr5_2:22037858-22037877 Msa0763180:CDS 45.0%
ACATTGCCCCGGTGATTCTT+TGG + chr5_2:22032440-22032459 None:intergenic 50.0%
ACTTGTCTGAGTGGCAGCAA+TGG + chr5_2:22032756-22032775 None:intergenic 50.0%
GTTAGCAGCACTTGTCTGAG+TGG + chr5_2:22032765-22032784 None:intergenic 50.0%
! AGTGGAGGAGATGCTTTGAG+AGG - chr5_2:22032797-22032816 Msa0763180:three_prime_UTR 50.0%
TGCAATCTCGTGCCACAAGA+AGG + chr5_2:22032827-22032846 None:intergenic 50.0%
TCTTGTGGCACGAGATTGCA+TGG - chr5_2:22032827-22032846 Msa0763180:three_prime_UTR 50.0%
!! GCAGGTACAGAAGCACTCAA+AGG + chr5_2:22033830-22033849 None:intergenic 50.0%
TTGAGTGCTTCTGTACCTGC+TGG - chr5_2:22033830-22033849 Msa0763180:CDS 50.0%
TGAGTGCTTCTGTACCTGCT+GGG - chr5_2:22033831-22033850 Msa0763180:CDS 50.0%
CAGTATCCCATTCAGCAAGG+CGG + chr5_2:22033913-22033932 None:intergenic 50.0%
GCACGAAGATATTGCAGTGC+TGG - chr5_2:22034091-22034110 Msa0763180:CDS 50.0%
CTGTTCCCAAGCTGATCAGT+AGG + chr5_2:22034229-22034248 None:intergenic 50.0%
! ACTGCGGAGCGTCAAAAACT+TGG - chr5_2:22034766-22034785 Msa0763180:intron 50.0%
ATTCCAAAGCTGCGTGACCA+GGG + chr5_2:22034800-22034819 None:intergenic 50.0%
AATTCCAAAGCTGCGTGACC+AGG + chr5_2:22034801-22034820 None:intergenic 50.0%
TGGAGCCTTTGACGTTCTCT+TGG - chr5_2:22034881-22034900 Msa0763180:intron 50.0%
GGAGCCTTTGACGTTCTCTT+GGG - chr5_2:22034882-22034901 Msa0763180:intron 50.0%
GAGCCTTTGACGTTCTCTTG+GGG - chr5_2:22034883-22034902 Msa0763180:intron 50.0%
TACCATGCAGGCTTCAGTCA+TGG - chr5_2:22035008-22035027 Msa0763180:intron 50.0%
AACCATGACTGAAGCCTGCA+TGG + chr5_2:22035013-22035032 None:intergenic 50.0%
CATCCTGTATGCTTACGCCA+TGG - chr5_2:22035515-22035534 Msa0763180:intron 50.0%
GCACTGAGCAAAGCTTACCA+TGG + chr5_2:22035535-22035554 None:intergenic 50.0%
! GATAATGGTAACCTTCCCCG+TGG - chr5_2:22035908-22035927 Msa0763180:intron 50.0%
AAAGTAATTGGCCACGGGGA+AGG + chr5_2:22035922-22035941 None:intergenic 50.0%
CGACAAAGTAATTGGCCACG+GGG + chr5_2:22035926-22035945 None:intergenic 50.0%
TGTGTTTGCTCCCACAGATG+AGG + chr5_2:22036379-22036398 None:intergenic 50.0%
CATCATTGCTCCACTGCATG+AGG - chr5_2:22036829-22036848 Msa0763180:intron 50.0%
ACCTGACATCAAGCCCATAG+TGG - chr5_2:22037009-22037028 Msa0763180:intron 50.0%
TCCACTATGGGCTTGATGTC+AGG + chr5_2:22037013-22037032 None:intergenic 50.0%
!!! TGCCTGCTGCTTTTTCCTTC+AGG + chr5_2:22037323-22037342 None:intergenic 50.0%
AAGATCACCACCCAAGAGAG+AGG - chr5_2:22037510-22037529 Msa0763180:intron 50.0%
! GAAGCGCCTTCCATTGAGAT+TGG - chr5_2:22037551-22037570 Msa0763180:CDS 50.0%
TCGCTTTGGCCCAATCTCAA+TGG + chr5_2:22037564-22037583 None:intergenic 50.0%
! AGTCCGAGGCCCTTCATTTT+TGG - chr5_2:22037589-22037608 Msa0763180:CDS 50.0%
!! GTCCGAGGCCCTTCATTTTT+GGG - chr5_2:22037590-22037609 Msa0763180:CDS 50.0%
TGCCCAAAAATGAAGGGCCT+CGG + chr5_2:22037595-22037614 None:intergenic 50.0%
TGATTCAGGAAGCAGCCGTA+AGG - chr5_2:22037737-22037756 Msa0763180:CDS 50.0%
GTGCAGACTGCCCAAATGTT+AGG + chr5_2:22037809-22037828 None:intergenic 50.0%
AACATTTGGGCAGTCTGCAC+GGG - chr5_2:22037809-22037828 Msa0763180:CDS 50.0%
GTGGTGATCCTTAGGTTCTC+TGG - chr5_2:22037831-22037850 Msa0763180:CDS 50.0%
TGATCCTTAGGTTCTCTGGC+CGG - chr5_2:22037835-22037854 Msa0763180:CDS 50.0%
GCGAAGTAGGAAAAACACCC+CGG + chr5_2:22037857-22037876 None:intergenic 50.0%
! GGGTGTTTTTCCTACTTCGC+TGG - chr5_2:22037857-22037876 Msa0763180:CDS 50.0%
GAGTGCTTCTGTACCTGCTG+GGG - chr5_2:22033832-22033851 Msa0763180:CDS 55.0%
TATCCCTGGTCACGCAGCTT+TGG - chr5_2:22034794-22034813 Msa0763180:intron 55.0%
!! TGCATGGTACGCTCTAGGGA+AGG + chr5_2:22034997-22035016 None:intergenic 55.0%
TTCCCTAGAGCGTACCATGC+AGG - chr5_2:22034996-22035015 Msa0763180:intron 55.0%
AGCCTGCATGGTACGCTCTA+GGG + chr5_2:22035001-22035020 None:intergenic 55.0%
AAGCCTGCATGGTACGCTCT+AGG + chr5_2:22035002-22035021 None:intergenic 55.0%
CTGCTTGCAATAGCCCCAAG+AGG + chr5_2:22035191-22035210 None:intergenic 55.0%
CTCTTGGGGCTATTGCAAGC+AGG - chr5_2:22035189-22035208 Msa0763180:CDS 55.0%
GGAGCAGAGGAACAGTCATG+AGG + chr5_2:22036752-22036771 None:intergenic 55.0%
GCTGAAACCTCTCTCTTGGG+TGG + chr5_2:22037520-22037539 None:intergenic 55.0%
CCTCGGACTTTGAGTCGCTT+TGG + chr5_2:22037578-22037597 None:intergenic 55.0%
CCAAAGCGACTCAAAGTCCG+AGG - chr5_2:22037575-22037594 Msa0763180:CDS 55.0%
GATCCTTAGGTTCTCTGGCC+GGG - chr5_2:22037836-22037855 Msa0763180:CDS 55.0%
ATCCTTAGGTTCTCTGGCCG+GGG - chr5_2:22037837-22037856 Msa0763180:CDS 55.0%
TCAGGTTCACCCAGCGAAGT+AGG + chr5_2:22037870-22037889 None:intergenic 55.0%
!! CCTACTTTTGCAGGTCGGTC+AGG + chr5_2:22037888-22037907 None:intergenic 55.0%
CCTGACCGACCTGCAAAAGT+AGG - chr5_2:22037885-22037904 Msa0763180:intron 55.0%
AGCCTCTCCGCCTTGCTGAA+TGG - chr5_2:22033903-22033922 Msa0763180:CDS 60.0%
GCCTCTCCGCCTTGCTGAAT+GGG - chr5_2:22033904-22033923 Msa0763180:CDS 60.0%
TCCCATTCAGCAAGGCGGAG+AGG + chr5_2:22033908-22033927 None:intergenic 60.0%
ATTTGGGCAGTCTGCACGGG+TGG - chr5_2:22037812-22037831 Msa0763180:CDS 60.0%
CTGCACGGGTGGTGATCCTT+AGG - chr5_2:22037823-22037842 Msa0763180:CDS 60.0%
AAGGCGGAGAGGCTGCACTC+TGG + chr5_2:22033897-22033916 None:intergenic 65.0%
CACCCCGGCCAGAGAACCTA+AGG + chr5_2:22037842-22037861 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 22032404 22038144 22032404 ID=Msa0763180;Name=Msa0763180
chr5_2 mRNA 22032404 22038144 22032404 ID=Msa0763180-mRNA-1;Parent=Msa0763180;Name=Msa0763180-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.9|0.90|0.90|1|1|11|507|879
chr5_2 exon 22032404 22033255 22032404 ID=Msa0763180-mRNA-1:exon:9135;Parent=Msa0763180-mRNA-1
chr5_2 exon 22033404 22033652 22033404 ID=Msa0763180-mRNA-1:exon:9134;Parent=Msa0763180-mRNA-1
chr5_2 exon 22033770 22034188 22033770 ID=Msa0763180-mRNA-1:exon:9133;Parent=Msa0763180-mRNA-1
chr5_2 exon 22035012 22035407 22035012 ID=Msa0763180-mRNA-1:exon:9132;Parent=Msa0763180-mRNA-1
chr5_2 exon 22035519 22035796 22035519 ID=Msa0763180-mRNA-1:exon:9131;Parent=Msa0763180-mRNA-1
chr5_2 exon 22035915 22035994 22035915 ID=Msa0763180-mRNA-1:exon:9130;Parent=Msa0763180-mRNA-1
chr5_2 exon 22036071 22036124 22036071 ID=Msa0763180-mRNA-1:exon:9129;Parent=Msa0763180-mRNA-1
chr5_2 exon 22036284 22036503 22036284 ID=Msa0763180-mRNA-1:exon:9128;Parent=Msa0763180-mRNA-1
chr5_2 exon 22036585 22036741 22036585 ID=Msa0763180-mRNA-1:exon:9127;Parent=Msa0763180-mRNA-1
chr5_2 exon 22037535 22037880 22037535 ID=Msa0763180-mRNA-1:exon:9126;Parent=Msa0763180-mRNA-1
chr5_2 exon 22038049 22038144 22038049 ID=Msa0763180-mRNA-1:exon:9125;Parent=Msa0763180-mRNA-1
chr5_2 CDS 22038049 22038144 22038049 ID=Msa0763180-mRNA-1:cds;Parent=Msa0763180-mRNA-1
chr5_2 CDS 22037535 22037880 22037535 ID=Msa0763180-mRNA-1:cds;Parent=Msa0763180-mRNA-1
chr5_2 CDS 22036585 22036741 22036585 ID=Msa0763180-mRNA-1:cds;Parent=Msa0763180-mRNA-1
chr5_2 CDS 22036284 22036503 22036284 ID=Msa0763180-mRNA-1:cds;Parent=Msa0763180-mRNA-1
chr5_2 CDS 22036071 22036124 22036071 ID=Msa0763180-mRNA-1:cds;Parent=Msa0763180-mRNA-1
chr5_2 CDS 22035915 22035994 22035915 ID=Msa0763180-mRNA-1:cds;Parent=Msa0763180-mRNA-1
chr5_2 CDS 22035519 22035796 22035519 ID=Msa0763180-mRNA-1:cds;Parent=Msa0763180-mRNA-1
chr5_2 CDS 22035012 22035407 22035012 ID=Msa0763180-mRNA-1:cds;Parent=Msa0763180-mRNA-1
chr5_2 CDS 22033770 22034188 22033770 ID=Msa0763180-mRNA-1:cds;Parent=Msa0763180-mRNA-1
chr5_2 CDS 22033404 22033652 22033404 ID=Msa0763180-mRNA-1:cds;Parent=Msa0763180-mRNA-1
chr5_2 CDS 22032911 22033255 22032911 ID=Msa0763180-mRNA-1:cds;Parent=Msa0763180-mRNA-1
chr5_2 three_prime_UTR 22032404 22032910 22032404 ID=Msa0763180-mRNA-1:three_prime_utr;Parent=Msa0763180-mRNA-1
Gene Sequence

>Msa0763180

ATGCTTTGCGTTGATATCGGTTTGGTTCATTTTCCAAAGAATCACCGGGGCAATGTTTTGCATGATTTTTTGCAGCTTAGTTTCAAAGTAGTTGTGGTAGAAGGAGGTAGAGTAAGACAATCTGAGGAGGTTAGAAATGGGTTAGAATTTTTGAAGCGTAAAAGGCTTCAGCGTGCACAAGCCATTGCTGCCACTCAGACAAGTGCTGCTAACGTGATGAATAGAAGTGGAGGAGATGCTTTGAGAGGTTCACCTTCTTGTGGCACGAGATTGCATGGTAATCCAGATGTGTTTTTCAAGCGGAAGGTGGATAAGTTTGATACAAGCGATTTGGATTGGACTGATAAAATTCCAGAATGTCCTGTGTATTCTCCAACAAAGGAGGAATTTGAAGATCCTTTGGTTTATTTGCAGAAGATAGCTCCAGAAGCTTCTAAATATGGTATATGCAAGATTATTTCGCCTTTGAGTGCTTCTGTACCTGCTGGGGTTGTTTTAATGAAGGAGCAACCTGGATTCAAGTTTACAACCAGAGTGCAGCCTCTCCGCCTTGCTGAATGGGATACTGAAGACAAAGTCACATTTTTCATGAGTGGAAGAAATTATACATTCCGTGAATATGAGAAAATGGCAAACAAGGTTTTTGCACGAAGATATTGCAGTGCTGGATGTCTTCCTGCCACTTACTTGGAAAAGGAGTTTTGGCAGGAAATTGGTCGTGGGAAAATGGATACTGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCAACTTCTCCTACTGATCAGCTTGGGAACAGCAAATGGAATTTGAAGAAACTTTCCCGGTTACCCAAATCAACTTTGCGTCTATTGGAAACGTCAATTCCGGGAGTAACAGAACCCATGCTATACATTGGAATGCTGTTTAGTATGTTTGCATGGCATGTGGAGGATCATTATTTGTACAGCATTAACTATCAGCACTGCGGAGCGTCAAAAACTTGGTATGGTATCCCTGGTCACGCAGCTTTGGAATTTGAAAGGGTGGTGAGAGAACATGTGTATTCTACTGATATTTTGTCAAGTGATGGAGAAGATGGAGCCTTTGACGTTCTCTTGGGGAAAACAACTTTATTTCCACCTAATATTTTGATGGACCATAAAGTCCCTGTCTATAAGGCTGTTCAAAAGCCAGGGGAGTTTGTAATAACCTTCCCTAGAGCGTACCATGCAGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCACTTGGTGATTGGTTTCCTCTTGGGGCTATTGCAAGCAGGAGATATGCACTTCTTAACAGGGTTCCTTTACTGCCCCATGAAGAACTTCTTTGCAAAGAAGCGATGCTTATTCATTCAAGCTTGGAGCTTGAAGATTCAGACTTTCCCTCTTCAGACTTGTTATCTCATCATAGAACAAAGATAGCTTTCATTAATTTGTTGCGTTTCCAGCATTGTGCTAGTTGGTTACTAATGAAATCAAGGGCGTGTATTAGTGTTTCTTCTCATTCGCATGGCACAATTCTCTGTAGCCTTTGCAAACGTGACTGTTATGTAGCTTATGTTGACTGCAGCTGTCACATGCATCCTGTATGCTTACGCCATGATGTTAAATCTCTTGACCTCATCTGTGGGAGCAAACACACTCTTTATCTGAGAGAGGATATTACGGATATGGAAGCTGCAGCAAAGATGTTTGAGCAGGAAGATGGGATATTGGATGAGATCAGCAAGCAATCCAAAAGTGACCAAAATATGTATTCATATCCTTTGTCAGATATGTTTCAGAGAGCTGAAGCAAATGGATATGAACCTTATTGTGAGCTTAAACTTGATTCTATGATTGAATTTTATACAACTCCAGGACTGCCAACAAATAATCCAGAGTGTGGTACACAGAATCAATTTGTTTTGGGGAATTGCTCAGAAATTCCTAAACCAGAAGTGTCTGACGTTTCCTTTTCTGCTGCATCCACTCTTTGTTCTCTTTCAGAACCTCATGACTGTTCCTCTGCTCCCAAAAATGCTGAGGGGAATTGTGAAGAACTTGGTGAAACAATATCCAACAGTGCATGCGAATCTTCTCTATCCCCTGCTTTGTATCATGAAAGCTCGGCTAAACTGCATGATCTACAGAAACCTGACATCAAGCCCATAGTGGATAATGACAGTGATGATTCTGATTCAGGAATATTTAGGGTAAAGCGCCCTTCCTCTCTTAAAGCAGAGAAAAGAAATCTGAAGGTTATGGCTTCAAAACATTCTGAGCAGCAGGGACTTAAACGATTGAAGACAGTCCTTCCTGAAGGAAAAAGCAGCAGGCAACAAATGAATTTCAGAACCAGTGAATCAAGTGATAAATATAACCCTGTTAATCATAAAGTTGATATTGAGATTTCCTCGAAGAACAGATTTGCAAGGGGAAATGGCACTCCCATTTCAGCAAGATATAAAAAGTCAGGCAATGAGGAAGTAAGTATGCATATGCAACAAGATCACCACCCAAGAGAGAGGTTTCAGCAAACTTATAGAGAAGCGCCTTCCATTGAGATTGGGCCAAAGCGACTCAAAGTCCGAGGCCCTTCATTTTTGGGCATAGAGAGCAGCAGATTGAATTGA
Protein sequence

>Msa0763180

MLCVDIGLVHFPKNHRGNVLHDFLQLSFKVVVVEGGRVRQSEEVRNGLEFLKRKRLQRAQAIAATQTSAANVMNRSGGDALRGSPSCGTRLHGNPDVFFKRKVDKFDTSDLDWTDKIPECPVYSPTKEEFEDPLVYLQKIAPEASKYGICKIISPLSASVPAGVVLMKEQPGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFREYEKMANKVFARRYCSAGCLPATYLEKEFWQEIGRGKMDTVEYACDVDGSAFSTSPTDQLGNSKWNLKKLSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYQHCGASKTWYGIPGHAALEFERVVREHVYSTDILSSDGEDGAFDVLLGKTTLFPPNILMDHKVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFALGDWFPLGAIASRRYALLNRVPLLPHEELLCKEAMLIHSSLELEDSDFPSSDLLSHHRTKIAFINLLRFQHCASWLLMKSRACISVSSHSHGTILCSLCKRDCYVAYVDCSCHMHPVCLRHDVKSLDLICGSKHTLYLREDITDMEAAAKMFEQEDGILDEISKQSKSDQNMYSYPLSDMFQRAEANGYEPYCELKLDSMIEFYTTPGLPTNNPECGTQNQFVLGNCSEIPKPEVSDVSFSAASTLCSLSEPHDCSSAPKNAEGNCEELGETISNSACESSLSPALYHESSAKLHDLQKPDIKPIVDNDSDDSDSGIFRVKRPSSLKAEKRNLKVMASKHSEQQGLKRLKTVLPEGKSSRQQMNFRTSESSDKYNPVNHKVDIEISSKNRFARGNGTPISARYKKSGNEEVSMHMQQDHHPRERFQQTYREAPSIEIGPKRLKVRGPSFLGIESSRLN*