AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0777410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777410 MtrunA17_Chr5g0432491 94.000 300 18 0 35 334 141 440 0.0 553
Msa0777410 MtrunA17_Chr5g0432491 78.571 56 9 1 1 56 1 53 4.12e-14 72.8
Msa0777410 MtrunA17_Chr3g0107051 60.265 302 105 5 35 326 138 434 7.79e-126 367
Msa0777410 MtrunA17_Chr2g0284031 45.342 322 134 5 35 317 148 466 5.29e-90 278
Msa0777410 MtrunA17_Chr7g0244561 47.651 298 139 5 35 326 135 421 8.41e-90 275
Msa0777410 MtrunA17_Chr8g0379091 42.609 345 144 8 35 330 143 482 9.54e-87 270
Msa0777410 MtrunA17_Chr2g0284011 44.262 305 136 9 50 325 144 443 4.94e-76 240
Msa0777410 MtrunA17_Chr5g0441011 44.558 294 142 7 52 327 148 438 1.62e-74 236
Msa0777410 MtrunA17_Chr7g0244521 40.850 306 154 7 35 315 129 432 2.86e-69 223
Msa0777410 MtrunA17_Chr4g0013131 43.289 298 146 8 50 326 144 439 3.05e-69 223
Msa0777410 MtrunA17_Chr5g0432471 38.509 322 151 6 40 315 130 450 5.29e-68 220
Msa0777410 MtrunA17_Chr1g0150321 42.806 278 150 4 53 323 148 423 3.73e-66 214
Msa0777410 MtrunA17_Chr3g0107011 39.803 304 159 6 35 315 131 433 5.04e-65 212
Msa0777410 MtrunA17_Chr2g0304111 40.357 280 142 7 51 307 157 434 3.82e-63 207
Msa0777410 MtrunA17_Chr4g0063881 40.433 277 141 7 52 307 146 419 1.38e-62 205
Msa0777410 MtrunA17_Chr2g0302431 38.014 292 160 5 35 306 138 428 7.17e-62 204
Msa0777410 MtrunA17_Chr4g0069301 38.411 302 160 8 35 312 144 443 2.42e-61 202
Msa0777410 MtrunA17_Chr8g0346081 39.792 289 154 6 35 306 135 420 1.06e-60 200
Msa0777410 MtrunA17_Chr4g0001331 37.785 307 159 8 50 325 152 457 8.56e-60 198
Msa0777410 MtrunA17_Chr2g0333821 37.755 294 158 5 53 321 149 442 4.67e-59 196
Msa0777410 MtrunA17_Chr8g0346071 41.176 272 141 6 51 306 151 419 1.71e-58 194
Msa0777410 MtrunA17_Chr5g0428031 36.823 277 151 7 52 307 144 417 2.65e-55 186
Msa0777410 MtrunA17_Chr3g0114511 34.551 301 188 3 35 327 147 446 2.85e-54 184
Msa0777410 MtrunA17_Chr1g0166101 48.588 177 76 5 52 223 160 326 6.84e-50 171
Msa0777410 MtrunA17_Chr1g0188031 41.797 256 124 9 52 292 157 402 4.88e-49 169
Msa0777410 MtrunA17_Chr1g0205421 33.660 306 177 6 35 315 129 433 8.84e-45 159
Msa0777410 MtrunA17_Chr4g0074111 36.789 299 134 9 40 326 136 391 1.29e-43 154
Msa0777410 MtrunA17_Chr4g0072831 31.950 241 119 5 35 273 107 304 6.97e-31 119
Msa0777410 MtrunA17_Chr6g0453671 41.322 121 68 1 53 173 155 272 1.50e-30 119
Msa0777410 MtrunA17_Chr3g0132671 41.463 123 69 1 53 175 185 304 7.64e-30 119
Msa0777410 MtrunA17_Chr6g0453681 40.496 121 69 1 53 173 155 272 1.71e-27 112
Msa0777410 MtrunA17_Chr6g0468751 40.833 120 68 1 53 172 155 271 2.80e-27 111
Msa0777410 MtrunA17_Chr3g0091421 56.471 85 36 1 54 138 148 231 8.80e-26 103
Msa0777410 MtrunA17_Chr5g0399911 36.667 150 66 5 54 181 154 296 1.02e-25 105
Msa0777410 MtrunA17_Chr8g0381821 39.855 138 73 5 54 185 139 272 1.66e-25 104
Msa0777410 MtrunA17_Chr3g0091281 47.115 104 54 1 35 138 129 231 6.88e-25 100
Msa0777410 MtrunA17_Chr5g0426521 39.333 150 81 5 54 197 139 284 9.71e-25 102
Msa0777410 MtrunA17_Chr8g0380661 39.370 127 68 3 52 172 134 257 3.03e-24 100
Msa0777410 MtrunA17_Chr3g0131061 39.394 132 63 4 54 175 139 263 3.36e-24 101
Msa0777410 MtrunA17_Chr8g0385281 40.152 132 62 4 54 175 140 264 4.30e-24 100
Msa0777410 MtrunA17_Chr4g0055451 36.184 152 68 5 51 180 137 281 1.36e-23 99.4
Msa0777410 MtrunA17_Chr5g0402661 40.310 129 68 4 53 175 152 277 1.38e-23 99.8
Msa0777410 MtrunA17_Chr2g0277501 39.394 132 63 4 54 175 139 263 1.98e-23 99.0
Msa0777410 MtrunA17_Chr3g0123791 36.913 149 76 5 47 185 133 273 4.29e-23 98.2
Msa0777410 MtrunA17_Chr8g0374571 34.641 153 86 5 34 175 133 282 8.55e-22 94.7
Msa0777410 MtrunA17_Chr4g0045371 38.281 128 70 4 54 175 158 282 9.61e-22 94.7
Msa0777410 MtrunA17_Chr1g0162301 38.281 128 70 4 54 175 159 283 1.29e-21 94.4
Msa0777410 MtrunA17_Chr4g0055431 33.775 151 78 5 51 191 143 281 1.61e-18 85.1
Msa0777410 MtrunA17_Chr4g0074811 37.302 126 70 5 54 175 232 352 3.38e-17 82.4
Msa0777410 MtrunA17_Chr8g0385341 35.433 127 73 4 50 172 167 288 3.51e-17 82.4
Msa0777410 MtrunA17_Chr3g0131181 35.772 123 70 4 54 172 170 287 4.06e-17 82.0
Msa0777410 MtrunA17_Chr1g0200601 29.341 167 103 5 16 172 127 288 5.95e-17 81.6
Msa0777410 MtrunA17_Chr4g0008561 34.351 131 78 4 46 172 150 276 2.06e-16 80.1
Msa0777410 MtrunA17_Chr0c02g0489761 34.400 125 73 5 54 174 219 338 6.82e-16 78.6
Msa0777410 MtrunA17_Chr5g0444171 34.375 128 75 5 52 175 231 353 7.00e-16 78.6
Msa0777410 MtrunA17_Chr4g0033371 35.606 132 74 6 47 173 206 331 1.02e-15 77.8
Msa0777410 MtrunA17_Chr3g0132591 35.537 121 67 5 57 172 246 360 1.15e-15 77.8
Msa0777410 MtrunA17_Chr1g0157131 33.846 130 77 5 50 175 211 335 1.73e-15 77.4
Msa0777410 MtrunA17_Chr3g0098951 33.333 126 75 4 54 175 225 345 2.16e-15 77.0
Msa0777410 MtrunA17_Chr1g0176421 30.380 158 95 6 28 175 270 422 2.18e-15 77.0
Msa0777410 MtrunA17_Chr3g0129721 36.296 135 73 4 46 173 156 284 2.54e-15 75.1
Msa0777410 MtrunA17_Chr1g0173541 34.375 128 75 5 50 173 189 311 4.24e-15 75.9
Msa0777410 MtrunA17_Chr1g0170551 30.000 140 95 2 44 183 132 268 1.05e-14 75.5
Msa0777410 MtrunA17_Chr8g0374701 30.460 174 92 7 50 219 269 417 1.63e-14 74.3
Msa0777410 MtrunA17_Chr8g0355131 36.290 124 71 3 54 173 188 307 1.69e-14 74.3
Msa0777410 MtrunA17_Chr1g0190131 32.031 128 77 4 53 175 145 267 2.06e-14 72.4
Msa0777410 MtrunA17_Chr5g0405421 30.303 132 83 4 48 175 236 362 3.24e-14 73.6
Msa0777410 MtrunA17_Chr4g0029241 28.571 140 88 2 42 171 240 377 3.46e-14 72.8
Msa0777410 MtrunA17_Chr7g0257751 34.646 127 74 5 50 172 195 316 3.63e-14 73.2
Msa0777410 MtrunA17_Chr4g0059951 34.375 128 75 5 54 177 214 336 3.73e-14 73.2
Msa0777410 MtrunA17_Chr7g0242561 32.576 132 80 5 50 177 193 319 5.02e-14 72.8
Msa0777410 MtrunA17_Chr3g0091411 44.706 85 27 2 54 138 96 160 5.67e-14 70.5
Msa0777410 MtrunA17_Chr1g0176751 27.778 162 102 5 21 172 226 382 6.94e-14 72.4
Msa0777410 MtrunA17_Chr8g0387671 34.677 124 72 5 54 173 207 325 1.04e-13 71.6
Msa0777410 MtrunA17_Chr7g0274941 30.000 130 83 3 51 175 151 277 1.11e-13 70.5
Msa0777410 MtrunA17_Chr4g0059751 31.250 128 77 4 52 173 231 353 1.84e-13 70.9
Msa0777410 MtrunA17_Chr7g0256001 32.353 136 83 5 50 181 282 412 1.90e-13 71.2
Msa0777410 MtrunA17_Chr7g0245031 33.594 128 74 4 52 173 283 405 2.01e-13 70.9
Msa0777410 MtrunA17_Chr8g0351491 30.469 128 81 3 50 175 149 270 2.60e-13 69.3
Msa0777410 MtrunA17_Chr8g0353621 31.250 128 80 3 50 175 143 264 3.15e-13 68.9
Msa0777410 MtrunA17_Chr2g0326531 28.571 140 88 2 42 171 242 379 8.71e-13 68.6
Msa0777410 MtrunA17_Chr3g0091291 31.250 144 72 3 54 197 96 212 9.62e-13 66.6
Msa0777410 MtrunA17_Chr7g0267771 31.250 128 79 4 50 173 225 347 9.95e-13 68.9
Msa0777410 MtrunA17_Chr3g0140631 29.932 147 92 4 31 172 148 288 2.40e-12 66.6
Msa0777410 MtrunA17_Chr7g0234641 35.354 99 62 2 75 173 239 335 8.92e-12 65.9
Msa0777410 MtrunA17_Chr3g0135951 36.496 137 74 8 79 208 303 433 2.11e-11 64.7
Msa0777410 MtrunA17_Chr2g0299991 30.827 133 76 5 52 171 204 333 4.34e-11 63.5
Msa0777410 MtrunA17_Chr7g0225201 31.250 128 79 6 48 172 164 285 6.03e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777410 AT2G30360.1 56.229 297 116 7 35 321 140 432 5.69e-109 325
Msa0777410 AT4G18700.1 47.649 319 132 4 35 320 143 459 1.32e-95 292
Msa0777410 AT5G45810.1 44.048 336 145 6 37 331 143 476 2.75e-88 273
Msa0777410 AT5G01820.1 49.508 305 147 4 35 333 139 442 5.87e-87 268
Msa0777410 AT1G29230.1 48.562 313 127 5 33 313 189 499 9.90e-87 270
Msa0777410 AT2G34180.1 44.373 311 136 4 35 313 174 479 1.06e-84 265
Msa0777410 AT5G45820.1 41.379 290 161 4 35 315 129 418 1.22e-78 247
Msa0777410 AT4G30960.1 44.108 297 140 7 40 315 142 433 3.98e-72 230
Msa0777410 AT1G30270.3 43.011 279 136 5 51 307 68 345 4.45e-72 228
Msa0777410 AT1G30270.1 43.011 279 136 5 51 307 165 442 5.34e-71 228
Msa0777410 AT1G30270.2 43.011 279 136 5 51 307 165 442 5.84e-71 228
Msa0777410 AT2G26980.3 43.253 289 143 6 52 322 149 434 1.98e-70 226
Msa0777410 AT2G26980.4 43.253 289 143 6 52 322 159 444 3.14e-70 226
Msa0777410 AT5G21326.1 43.554 287 137 8 51 317 147 428 6.06e-70 224
Msa0777410 AT5G58380.1 40.741 297 141 5 53 315 147 442 1.28e-68 222
Msa0777410 AT2G38490.1 43.686 293 156 4 35 324 145 431 1.63e-68 221
Msa0777410 AT5G01810.1 42.909 275 145 5 50 315 144 415 1.68e-68 220
Msa0777410 AT5G01810.2 42.909 275 145 5 50 315 144 415 1.68e-68 220
Msa0777410 AT1G01140.1 41.818 275 141 4 51 307 153 426 1.86e-68 221
Msa0777410 AT5G10930.1 40.753 292 147 4 50 319 145 432 1.13e-67 219
Msa0777410 AT5G25110.1 41.869 289 135 6 50 313 175 455 1.20e-67 220
Msa0777410 AT1G01140.3 41.912 272 139 4 51 304 153 423 3.27e-67 218
Msa0777410 AT1G01140.2 41.516 277 141 5 51 307 153 428 1.91e-66 216
Msa0777410 AT5G07070.1 40.989 283 144 4 55 315 149 430 1.36e-65 214
Msa0777410 AT2G26980.1 49.099 222 98 3 52 259 149 369 1.64e-65 211
Msa0777410 AT2G26980.5 49.099 222 98 3 52 259 149 369 8.82e-65 211
Msa0777410 AT4G14580.1 46.544 217 110 4 50 264 155 367 5.54e-60 198
Msa0777410 AT3G17510.2 37.942 311 163 8 35 323 58 360 6.15e-58 191
Msa0777410 AT5G35410.1 38.514 296 152 9 35 306 129 418 6.23e-57 191
Msa0777410 AT3G17510.1 37.942 311 163 8 35 323 138 440 7.36e-57 191
Msa0777410 AT2G25090.1 37.299 311 171 6 35 321 134 444 1.51e-56 191
Msa0777410 AT1G48260.2 35.395 291 171 4 35 309 44 333 4.68e-56 186
Msa0777410 AT1G48260.4 35.395 291 171 4 35 309 44 333 4.68e-56 186
Msa0777410 AT1G48260.3 35.395 291 171 4 35 309 44 333 4.68e-56 186
Msa0777410 AT1G48260.5 35.395 291 171 4 35 309 44 333 4.68e-56 186
Msa0777410 AT5G01810.3 39.326 267 121 5 50 315 144 370 2.16e-55 185
Msa0777410 AT1G48260.1 35.395 291 171 4 35 309 129 418 5.85e-55 185
Msa0777410 AT4G24400.1 36.735 294 161 8 35 307 127 416 2.66e-54 184
Msa0777410 AT5G35410.2 42.917 240 112 7 35 254 129 363 2.15e-53 180
Msa0777410 AT3G23000.1 45.055 182 93 3 50 231 159 333 5.49e-53 180
Msa0777410 AT4G24400.2 41.597 238 117 7 35 254 127 360 1.45e-51 176
Msa0777410 AT2G26980.2 63.889 108 39 0 52 159 149 256 3.98e-48 163
Msa0777410 AT5G57630.3 36.559 279 156 9 40 303 42 314 7.22e-47 161
Msa0777410 AT5G21222.1 56.061 132 58 0 53 184 149 280 9.39e-47 169
Msa0777410 AT5G21222.2 56.061 132 58 0 53 184 149 280 9.39e-47 169
Msa0777410 AT5G21222.4 56.061 132 58 0 53 184 149 280 9.39e-47 169
Msa0777410 AT5G21222.3 56.061 132 58 0 53 184 149 280 9.39e-47 169
Msa0777410 AT5G57630.2 35.943 281 163 8 35 304 129 403 3.46e-46 162
Msa0777410 AT5G57630.1 36.559 279 156 9 40 303 130 402 1.21e-45 160
Msa0777410 AT3G01090.3 40.496 121 69 1 53 173 155 272 5.92e-28 114
Msa0777410 AT3G01090.1 40.496 121 69 1 53 173 155 272 5.92e-28 114
Msa0777410 AT3G01090.2 40.496 121 69 1 53 173 178 295 7.02e-28 114
Msa0777410 AT3G29160.3 40.496 121 69 1 53 173 156 273 4.36e-27 109
Msa0777410 AT3G29160.1 40.496 121 69 1 53 173 156 273 2.39e-26 109
Msa0777410 AT3G29160.2 40.496 121 69 1 53 173 156 273 2.39e-26 109
Msa0777410 AT4G40010.1 37.126 167 87 6 24 175 100 263 4.12e-26 107
Msa0777410 AT5G08590.2 41.667 132 60 4 54 175 63 187 4.50e-26 105
Msa0777410 AT5G08590.1 41.667 132 60 4 54 175 139 263 1.30e-25 105
Msa0777410 AT5G63650.1 39.394 132 63 4 54 175 139 263 1.05e-24 103
Msa0777410 AT3G50500.2 37.580 157 83 4 34 175 133 289 1.66e-24 102
Msa0777410 AT5G39440.1 42.149 121 64 3 53 172 155 270 2.12e-24 103
Msa0777410 AT1G78290.3 38.095 147 73 5 47 183 132 270 2.39e-24 102
Msa0777410 AT1G78290.2 38.095 147 73 5 47 183 132 270 2.39e-24 102
Msa0777410 AT1G60940.1 40.157 127 67 3 54 174 139 262 5.10e-24 101
Msa0777410 AT1G60940.2 40.157 127 67 3 54 174 139 262 5.10e-24 101
Msa0777410 AT3G50500.1 37.908 153 81 5 34 175 133 282 8.75e-24 100
Msa0777410 AT1G10940.2 40.152 132 62 4 54 175 147 271 1.97e-23 99.8
Msa0777410 AT2G23030.1 37.086 151 77 5 54 193 139 282 2.38e-23 99.0
Msa0777410 AT1G10940.1 40.152 132 62 4 54 175 139 263 2.41e-23 99.4
Msa0777410 AT4G33950.2 38.281 128 70 4 54 175 156 280 3.27e-22 95.9
Msa0777410 AT4G33950.1 38.281 128 70 4 54 175 156 280 5.37e-22 95.5
Msa0777410 AT5G66880.1 39.844 128 68 4 54 175 157 281 4.20e-21 93.2
Msa0777410 AT5G66880.2 39.844 128 68 4 54 175 157 281 4.20e-21 93.2
Msa0777410 AT1G50700.1 38.095 126 69 5 54 175 214 334 5.91e-18 85.1
Msa0777410 AT1G50700.3 38.095 126 69 5 54 175 214 334 5.93e-18 84.7
Msa0777410 AT1G50700.2 28.682 258 131 11 54 303 214 426 6.98e-18 84.7
Msa0777410 AT3G53930.1 38.211 123 68 4 54 172 159 277 8.47e-18 84.7
Msa0777410 AT3G53930.2 38.211 123 68 4 54 172 159 277 8.79e-18 84.7
Msa0777410 AT1G12680.1 35.714 126 72 4 51 172 235 355 1.40e-17 84.0
Msa0777410 AT2G37840.1 35.766 137 78 5 46 176 143 275 2.80e-17 83.2
Msa0777410 AT3G20410.2 34.921 126 73 4 54 175 232 352 7.09e-17 82.0
Msa0777410 AT3G20410.1 34.921 126 73 4 54 175 232 352 7.09e-17 82.0
Msa0777410 AT5G23580.1 30.968 155 92 5 28 172 131 280 1.12e-16 81.3
Msa0777410 AT4G09570.1 32.258 155 90 6 28 172 134 283 1.22e-16 80.9
Msa0777410 AT4G21940.3 35.385 130 75 5 50 175 239 363 2.98e-16 79.7
Msa0777410 AT4G21940.1 35.385 130 75 5 50 175 239 363 3.15e-16 80.1
Msa0777410 AT4G04720.2 33.846 130 77 5 50 175 217 341 3.34e-16 79.7
Msa0777410 AT4G04720.1 33.846 130 77 5 50 175 217 341 3.34e-16 79.7
Msa0777410 AT4G21940.2 35.385 130 75 5 50 175 239 363 3.46e-16 79.7
Msa0777410 AT4G04700.1 35.075 134 78 4 46 175 165 293 3.52e-16 79.7
Msa0777410 AT1G08650.1 32.558 172 101 6 20 181 117 283 4.19e-16 77.8
Msa0777410 AT4G04740.2 35.385 130 75 5 50 175 206 330 4.67e-16 79.3
Msa0777410 AT4G04740.4 35.385 130 75 5 50 175 206 330 5.30e-16 79.3
Msa0777410 AT4G04740.6 35.385 130 75 5 50 175 206 330 5.30e-16 79.3
Msa0777410 AT4G04740.5 35.385 130 75 5 50 175 206 330 5.30e-16 79.3
Msa0777410 AT4G04740.3 35.385 130 75 5 50 175 206 330 5.30e-16 79.3
Msa0777410 AT4G04740.1 35.385 130 75 5 50 175 206 330 5.30e-16 79.3
Msa0777410 AT4G04740.7 35.385 130 75 5 50 175 206 330 5.30e-16 79.3
Msa0777410 AT1G35670.1 31.613 155 91 6 28 172 135 284 8.64e-16 78.6
Msa0777410 AT2G31500.1 34.615 130 76 5 50 175 203 327 8.80e-16 78.6
Msa0777410 AT1G61950.1 33.333 135 81 5 45 175 231 360 1.85e-15 77.8
Msa0777410 AT4G35310.2 33.871 124 73 4 53 172 237 355 3.54e-15 76.6
Msa0777410 AT4G35310.1 33.871 124 73 4 53 172 237 355 3.54e-15 76.6
Msa0777410 AT3G19100.1 35.507 138 79 6 46 179 281 412 5.30e-15 76.3
Msa0777410 AT2G17890.1 32.540 126 76 4 54 175 251 371 5.54e-15 76.3
Msa0777410 AT5G19360.1 28.477 151 93 6 34 174 183 328 8.00e-15 75.5
Msa0777410 AT4G23650.1 31.953 169 86 7 54 218 219 362 8.07e-15 75.5
Msa0777410 AT4G04695.1 32.061 131 78 4 50 175 169 293 1.38e-14 74.7
Msa0777410 AT2G41860.2 32.308 130 79 5 50 175 191 315 3.16e-14 73.9
Msa0777410 AT3G56760.1 35.878 131 75 5 46 172 261 386 3.19e-14 73.9
Msa0777410 AT2G41860.1 32.308 130 79 5 50 175 191 315 4.23e-14 73.6
Msa0777410 AT2G35890.2 29.167 168 104 6 16 173 229 391 4.96e-14 73.2
Msa0777410 AT2G35890.1 29.167 168 104 6 16 173 229 391 4.96e-14 73.2
Msa0777410 AT3G10660.2 28.205 156 97 5 28 173 295 445 6.05e-14 73.2
Msa0777410 AT3G10660.1 28.205 156 97 5 28 173 295 445 6.05e-14 73.2
Msa0777410 AT2G17290.1 32.258 124 75 4 53 172 225 343 8.16e-14 72.8
Msa0777410 AT2G17290.2 32.258 124 75 4 53 172 225 343 8.16e-14 72.8
Msa0777410 AT3G51850.3 32.576 132 80 5 50 177 191 317 8.17e-14 72.4
Msa0777410 AT5G04870.1 31.452 124 76 4 54 173 291 409 8.68e-14 72.8
Msa0777410 AT2G38910.1 28.846 156 96 5 28 173 243 393 9.26e-14 72.4
Msa0777410 AT3G51850.2 32.576 132 80 5 50 177 191 317 9.46e-14 72.4
Msa0777410 AT3G51850.1 32.576 132 80 5 50 177 191 317 9.68e-14 72.4
Msa0777410 AT5G66210.3 31.746 126 77 4 54 175 205 325 1.06e-13 72.0
Msa0777410 AT5G66210.5 31.746 126 77 4 54 175 205 325 1.22e-13 72.0
Msa0777410 AT4G38230.1 32.258 124 75 4 53 172 20 138 1.24e-13 71.2
Msa0777410 AT3G04530.1 29.697 165 103 4 16 172 110 269 1.27e-13 70.5
Msa0777410 AT5G66210.1 31.746 126 77 4 54 175 205 325 1.48e-13 71.6
Msa0777410 AT5G66210.2 31.746 126 77 4 54 175 205 325 1.48e-13 71.6
Msa0777410 AT4G38230.2 32.258 124 75 4 53 172 194 312 1.61e-13 71.6
Msa0777410 AT1G76040.2 31.008 129 80 5 48 172 247 370 1.64e-13 71.6
Msa0777410 AT5G66210.6 31.746 126 77 4 54 175 205 325 1.69e-13 71.2
Msa0777410 AT5G66210.4 31.746 126 77 4 54 175 205 325 1.69e-13 71.2
Msa0777410 AT1G76040.3 31.008 129 80 5 48 172 247 370 1.86e-13 71.6
Msa0777410 AT4G38230.4 32.258 124 75 4 53 172 164 282 1.88e-13 71.2
Msa0777410 AT4G38230.3 32.258 124 75 4 53 172 164 282 1.88e-13 71.2
Msa0777410 AT3G45240.2 28.369 141 89 2 42 172 231 369 2.59e-13 70.9
Msa0777410 AT3G45240.1 28.369 141 89 2 42 172 231 369 2.59e-13 70.9
Msa0777410 AT1G50240.3 30.000 140 95 2 44 183 131 267 4.41e-13 70.9
Msa0777410 AT1G50240.2 30.000 140 95 2 44 183 131 267 4.41e-13 70.9
Msa0777410 AT3G45240.3 27.660 141 87 2 42 172 231 366 1.11e-12 68.9
Msa0777410 AT1G08650.2 31.481 162 95 6 20 172 117 271 1.52e-12 67.4
Msa0777410 AT5G60550.1 30.645 124 82 2 50 171 248 369 2.10e-12 68.2
Msa0777410 AT4G32830.1 29.932 147 92 4 31 172 142 282 4.71e-12 66.2
Msa0777410 AT2G25880.1 29.932 147 92 4 31 172 136 276 4.74e-12 66.2
Msa0777410 AT2G25880.4 31.538 130 81 3 45 172 166 289 5.47e-12 65.9
Msa0777410 AT2G25880.2 31.452 124 77 3 51 172 127 244 8.65e-12 65.1
Msa0777410 AT1G12580.1 28.289 152 96 7 51 195 182 327 1.06e-11 66.2
Msa0777410 AT2G25880.3 31.783 129 80 3 45 171 214 336 1.28e-11 65.5
Msa0777410 AT3G50530.2 32.710 107 66 4 71 173 338 442 1.78e-11 65.5
Msa0777410 AT4G08480.1 29.921 127 82 3 51 174 635 757 3.19e-11 65.1
Msa0777410 AT3G10540.1 28.148 135 83 3 52 173 180 313 8.41e-11 63.2

Find 116 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAGAGGGTTGAATCTTTC+TGG 0.016792 5_2:+56353728 Msa0777410:CDS
CTATACATCACCATCAAATT+TGG 0.154632 5_2:-56353449 None:intergenic
AATTTGAAGGTTTCGGATTT+TGG 0.174809 5_2:+56353245 Msa0777410:CDS
ATCAAATTTGGATCATTAAA+TGG 0.183381 5_2:-56353437 None:intergenic
CCAGAGGGTTGAATCTTTCT+GGG 0.264535 5_2:+56353729 Msa0777410:CDS
GATGTTTGTGGATTATTATT+TGG 0.308204 5_2:+56354291 Msa0777410:three_prime_UTR
GGAACTCTCTTGTGTTATCT+AGG 0.310020 5_2:+56354161 Msa0777410:three_prime_UTR
TTTGAGAAGAAGGTTAATAA+TGG 0.315562 5_2:+56353650 Msa0777410:CDS
GCAGGGGAATTTGAAGGTTT+CGG 0.335526 5_2:+56353238 Msa0777410:intron
GTGGTTGAGGTGAAGAGGTT+TGG 0.337079 5_2:+56353950 Msa0777410:CDS
ATCTTGTTTGTTCTTGTGGC+TGG 0.341591 5_2:+56353407 Msa0777410:CDS
ATGGAGCTAAGGTGGATATT+TGG 0.351996 5_2:+56353372 Msa0777410:CDS
TTGAGAAGAAGGTTAATAAT+GGG 0.362004 5_2:+56353651 Msa0777410:CDS
GTTTATGTTGAGGGAGTTAC+CGG 0.371799 5_2:+56353781 Msa0777410:CDS
TACGAGCTCGGCAAACTCTT+AGG 0.373459 5_2:+56352701 Msa0777410:CDS
ATTTAATGATCCAAATTTGA+TGG 0.379969 5_2:+56353439 Msa0777410:CDS
GTGGAGGCATCTGCCGGAGC+TGG 0.380065 5_2:-56352653 None:intergenic
TGAGGCAGCCGCGAAGGCAG+AGG 0.380189 5_2:+56353823 Msa0777410:CDS
GTGGAAGTAACCTGAGAAAA+TGG 0.396205 5_2:+56354269 Msa0777410:three_prime_UTR
CAACCATCTCAGCGGTTAAT+CGG 0.399213 5_2:-56353928 None:intergenic
CAAATTTGATGGTGATGTAT+AGG 0.403993 5_2:+56353450 Msa0777410:CDS
CACAAGCCCCTCTGCCTTCG+CGG 0.409316 5_2:-56353831 None:intergenic
TATTATCTTGTTTGTTCTTG+TGG 0.410114 5_2:+56353403 Msa0777410:CDS
GAGAATGGTGATTTGGTGAT+TGG 0.410205 5_2:+56353893 Msa0777410:CDS
AGGTGAGAGGTTTATGTTGA+GGG 0.413807 5_2:+56353772 Msa0777410:CDS
TGAAGAGGAGAATGGTGATT+TGG 0.418514 5_2:+56353886 Msa0777410:CDS
ACAGGCAGCAGCGCCAGCTC+CGG 0.420125 5_2:+56352640 Msa0777410:CDS
GTTGAGGTGAAGAGGTTTGG+TGG 0.421173 5_2:+56353953 Msa0777410:CDS
CGCTGAGATGGTTGTGGTTG+AGG 0.423480 5_2:+56353937 Msa0777410:CDS
AGGGATCCTTGGTTTAGAAA+AGG 0.424610 5_2:+56353590 Msa0777410:CDS
GAGTGCGGTGGTGGTGGTGG+AGG 0.432097 5_2:-56352669 None:intergenic
GTGGTGGTGGAGGCATCTGC+CGG 0.435330 5_2:-56352659 None:intergenic
GAAGAGTGCGGTGGTGGTGG+TGG 0.444330 5_2:-56352672 None:intergenic
GCCTTCTCCACAACCTTCTC+CGG 0.452352 5_2:-56353800 None:intergenic
GGGATCCTTGGTTTAGAAAA+GGG 0.452738 5_2:+56353591 Msa0777410:CDS
GAGGCAGCCGCGAAGGCAGA+GGG 0.455623 5_2:+56353824 Msa0777410:CDS
TGGGGATGCGGTTGCTTTCG+AGG 0.458789 5_2:+56353973 Msa0777410:CDS
GAAGAGGTTTGGTGGGGATG+CGG 0.461683 5_2:+56353961 Msa0777410:CDS
TGAATTGCAGGGGAATTTGA+AGG 0.462245 5_2:+56353232 Msa0777410:intron
TTGAGGTGAAGAGGTTTGGT+GGG 0.463365 5_2:+56353954 Msa0777410:CDS
AGGTTATGATGGAGCTAAGG+TGG 0.467905 5_2:+56353364 Msa0777410:CDS
CGATGCAACGACGTCGAACC+AGG 0.472633 5_2:+56354030 Msa0777410:CDS
GGGATGTTACACACGCTTTG+TGG 0.478374 5_2:+56353302 Msa0777410:CDS
CACGCGCGGAACACGGAGAA+TGG 0.482486 5_2:+56352749 Msa0777410:CDS
AAAGAGCAAGTTCGAATTGA+CGG 0.485186 5_2:+56353281 Msa0777410:CDS
CCTGAGAAAATGGATGTTTG+TGG 0.486089 5_2:+56354279 Msa0777410:three_prime_UTR
AGAATGGTGATTTGGTGATT+GGG 0.488622 5_2:+56353894 Msa0777410:CDS
GAAGGCTGAGGCAGCCGCGA+AGG 0.488658 5_2:+56353817 Msa0777410:CDS
GCTTGTGGTGAGGAGGAAGA+AGG 0.489755 5_2:+56353847 Msa0777410:CDS
TTGTTGTATTGATTTGTTTG+TGG 0.490954 5_2:+56354250 Msa0777410:three_prime_UTR
CCCAGAAAGATTCAACCCTC+TGG 0.491104 5_2:-56353729 None:intergenic
ATCTCCGGTGCAACATATGC+AGG 0.496271 5_2:-56353329 None:intergenic
CATGAGACTGAGGTTGGTCC+TGG 0.497387 5_2:-56354048 None:intergenic
TTAGCGAAGAGAGGTTATGA+TGG 0.497520 5_2:+56353353 Msa0777410:CDS
ACCACCACCACCGCACTCTT+CGG 0.497587 5_2:+56352674 Msa0777410:CDS
GCCGAAGAGTGCGGTGGTGG+TGG 0.498160 5_2:-56352675 None:intergenic
GCGGTTGATGGATACGAATC+CGG 0.498246 5_2:+56353538 Msa0777410:CDS
GTGAGGAGGAAGAAGGAATG+TGG 0.500934 5_2:+56353854 Msa0777410:CDS
ACCGGAGAAGGTTGTGGAGA+AGG 0.502457 5_2:+56353799 Msa0777410:CDS
TCTCACTAGTCAGCACTAGC+AGG 0.506001 5_2:-56354076 None:intergenic
GCGAATGTCGGATATCGAAC+AGG 0.510759 5_2:+56352622 None:intergenic
GGTTAATAATGGGGAAGAAG+AGG 0.515040 5_2:+56353661 Msa0777410:CDS
CAGAGGGGCTTGTGGTGAGG+AGG 0.523463 5_2:+56353840 Msa0777410:CDS
GGAATTTAAGTGTCCACGAT+GGG 0.526064 5_2:+56353487 Msa0777410:CDS
TGAGGAGGAAGAAGGAATGT+GGG 0.528996 5_2:+56353855 Msa0777410:CDS
AGGCAGAGGGGCTTGTGGTG+AGG 0.531099 5_2:+56353837 Msa0777410:CDS
CCTCTCTTCGCTAAAATCTC+CGG 0.532320 5_2:-56353344 None:intergenic
GTTTAGAAAAGGGTATAAAG+AGG 0.542541 5_2:+56353601 Msa0777410:CDS
TGAGGTGAAGAGGTTTGGTG+GGG 0.547225 5_2:+56353955 Msa0777410:CDS
TTACCGATTAACCGCTGAGA+TGG 0.549561 5_2:+56353925 Msa0777410:CDS
GGAGTTACCGGAGAAGGTTG+TGG 0.549929 5_2:+56353793 Msa0777410:CDS
GTTGAGGGAGTTACCGGAGA+AGG 0.550054 5_2:+56353787 Msa0777410:CDS
GTTAATAATGGGGAAGAAGA+GGG 0.551370 5_2:+56353662 Msa0777410:CDS
TTGATGGTGGTGAAGGTGAG+AGG 0.552917 5_2:+56353759 Msa0777410:CDS
GGACCGCATGAGACTGAGGT+TGG 0.553176 5_2:-56354054 None:intergenic
CGGTTGCTTTCGAGGAAGTG+TGG 0.555573 5_2:+56353981 Msa0777410:CDS
AAGAGCAAGTTCGAATTGAC+GGG 0.560110 5_2:+56353282 Msa0777410:CDS
TGGTTGTGGTTGAGGTGAAG+AGG 0.561122 5_2:+56353945 Msa0777410:CDS
TGAGAAGAAGGTTAATAATG+GGG 0.561204 5_2:+56353652 Msa0777410:CDS
TGTATAGGAAGATATATAGC+GGG 0.562236 5_2:+56353465 Msa0777410:CDS
TTTGCCGAAGAGTGCGGTGG+TGG 0.563561 5_2:-56352678 None:intergenic
CGCGAAGGCAGAGGGGCTTG+TGG 0.565294 5_2:+56353832 Msa0777410:CDS
TCAACAGTTATCCTCGTCTC+CGG 0.565355 5_2:-56353557 None:intergenic
GTGTCCACGATGGGTTTCAC+CGG 0.565577 5_2:+56353496 Msa0777410:CDS
CTCGGCAAACTCTTAGGATG+CGG 0.568694 5_2:+56352707 Msa0777410:CDS
GAAGGTTGTGGAGAAGGCTG+AGG 0.573035 5_2:+56353805 Msa0777410:CDS
ATGTGGGGTGGAAATTGAAG+AGG 0.574514 5_2:+56353871 Msa0777410:CDS
GGGTTTCACCGGATCTAAAG+CGG 0.576676 5_2:+56353507 Msa0777410:CDS
AAGGTGAGAGGTTTATGTTG+AGG 0.581675 5_2:+56353771 Msa0777410:CDS
GTGGAAATTGAAGAGGAGAA+TGG 0.587172 5_2:+56353878 Msa0777410:CDS
GAGAGGTTATGATGGAGCTA+AGG 0.587875 5_2:+56353361 Msa0777410:CDS
CATTCTCCGTGTTCCGCGCG+TGG 0.589542 5_2:-56352748 None:intergenic
AACACCTGCATATGTTGCAC+CGG 0.597649 5_2:+56353325 Msa0777410:CDS
ATGTATAGGAAGATATATAG+CGG 0.602397 5_2:+56353464 Msa0777410:CDS
AAGGTGGATATTTGGTCATG+TGG 0.602935 5_2:+56353380 Msa0777410:CDS
GTCGTTGCATCGCACAAATG+TGG 0.603029 5_2:-56354019 None:intergenic
GGAAGAAGAGGGAAAACCGT+TGG 0.604370 5_2:+56353673 Msa0777410:CDS
ATTAACCGCTGAGATGGTTG+TGG 0.604688 5_2:+56353931 Msa0777410:CDS
AGTATACCACGCGCGGAACA+CGG 0.610786 5_2:+56352742 Msa0777410:CDS
CTCGTATTTGCCGAAGAGTG+CGG 0.612542 5_2:-56352684 None:intergenic
GAGGAAGAAGGAATGTGGGG+TGG 0.612724 5_2:+56353859 Msa0777410:CDS
CTCTTCGGCAAATACGAGCT+CGG 0.619869 5_2:+56352689 Msa0777410:CDS
CTCACTAGTCAGCACTAGCA+GGG 0.623859 5_2:-56354075 None:intergenic
TGGATACGAATCCGGAGACG+AGG 0.631809 5_2:+56353546 Msa0777410:CDS
TCAAACGCATTGAAATCCAA+CGG 0.640020 5_2:-56353689 None:intergenic
GGGAATTTAAGTGTCCACGA+TGG 0.643808 5_2:+56353486 Msa0777410:CDS
AGGCAGCCGCGAAGGCAGAG+GGG 0.646936 5_2:+56353825 Msa0777410:CDS
GCAGGGACCGCATGAGACTG+AGG 0.658504 5_2:-56354058 None:intergenic
GAGGAGGAAGAAGGAATGTG+GGG 0.665403 5_2:+56353856 Msa0777410:CDS
GTATAGGAAGATATATAGCG+GGG 0.668415 5_2:+56353466 Msa0777410:CDS
TTGCGAAAGTATACCACGCG+CGG 0.677974 5_2:+56352735 Msa0777410:CDS
GTATTTGCCGAAGAGTGCGG+TGG 0.685522 5_2:-56352681 None:intergenic
GGACCAACCTCAGTCTCATG+CGG 0.707500 5_2:+56354051 Msa0777410:CDS
AAGTGTGGAAGAATAAGTTG+AGG 0.714623 5_2:+56353996 Msa0777410:CDS
CTCAACCACAACCATCTCAG+CGG 0.728004 5_2:-56353936 None:intergenic
AGATCCGGTGAAACCCATCG+TGG 0.755036 5_2:-56353500 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATAATTTTGATGCTT+TGG + chr5_2:56354214-56354233 Msa0777410:three_prime_UTR 15.0%
!!! TATATATAATTTTGATGCTT+TGG + chr5_2:56354214-56354233 Msa0777410:three_prime_UTR 15.0%
!!! AAATTTGTTACTAGATGATA+AGG + chr5_2:56353084-56353103 Msa0777410:intron 20.0%
!!! TAATTAGTGTTATTCTGTTA+TGG + chr5_2:56353200-56353219 Msa0777410:intron 20.0%
!! ATCAAATTTGGATCATTAAA+TGG - chr5_2:56353440-56353459 None:intergenic 20.0%
!! ATTTAATGATCCAAATTTGA+TGG + chr5_2:56353439-56353458 Msa0777410:CDS 20.0%
!!! AAATTTGTTACTAGATGATA+AGG + chr5_2:56353084-56353103 Msa0777410:intron 20.0%
!!! TAATTAGTGTTATTCTGTTA+TGG + chr5_2:56353200-56353219 Msa0777410:intron 20.0%
!! ATCAAATTTGGATCATTAAA+TGG - chr5_2:56353440-56353459 None:intergenic 20.0%
!! ATTTAATGATCCAAATTTGA+TGG + chr5_2:56353439-56353458 Msa0777410:CDS 20.0%
!! AACGAAGATCTATTTTGTTA+TGG + chr5_2:56352913-56352932 Msa0777410:intron 25.0%
!! TCATCTAGTAACAAATTTTC+AGG - chr5_2:56353082-56353101 None:intergenic 25.0%
!! TATTATCTTGTTTGTTCTTG+TGG + chr5_2:56353403-56353422 Msa0777410:CDS 25.0%
! ATGTATAGGAAGATATATAG+CGG + chr5_2:56353464-56353483 Msa0777410:CDS 25.0%
! TTTGAGAAGAAGGTTAATAA+TGG + chr5_2:56353650-56353669 Msa0777410:CDS 25.0%
! TTGAGAAGAAGGTTAATAAT+GGG + chr5_2:56353651-56353670 Msa0777410:CDS 25.0%
!!! TTGTTGTATTGATTTGTTTG+TGG + chr5_2:56354250-56354269 Msa0777410:three_prime_UTR 25.0%
!! GATGTTTGTGGATTATTATT+TGG + chr5_2:56354291-56354310 Msa0777410:three_prime_UTR 25.0%
!! AACGAAGATCTATTTTGTTA+TGG + chr5_2:56352913-56352932 Msa0777410:intron 25.0%
!! TCATCTAGTAACAAATTTTC+AGG - chr5_2:56353082-56353101 None:intergenic 25.0%
!! TATTATCTTGTTTGTTCTTG+TGG + chr5_2:56353403-56353422 Msa0777410:CDS 25.0%
! ATGTATAGGAAGATATATAG+CGG + chr5_2:56353464-56353483 Msa0777410:CDS 25.0%
! TTTGAGAAGAAGGTTAATAA+TGG + chr5_2:56353650-56353669 Msa0777410:CDS 25.0%
! TTGAGAAGAAGGTTAATAAT+GGG + chr5_2:56353651-56353670 Msa0777410:CDS 25.0%
!!! TTGTTGTATTGATTTGTTTG+TGG + chr5_2:56354250-56354269 Msa0777410:three_prime_UTR 25.0%
!! GATGTTTGTGGATTATTATT+TGG + chr5_2:56354291-56354310 Msa0777410:three_prime_UTR 25.0%
! TGGATTTTGTAATGAATTGC+AGG + chr5_2:56353220-56353239 Msa0777410:intron 30.0%
! GGATTTTGTAATGAATTGCA+GGG + chr5_2:56353221-56353240 Msa0777410:intron 30.0%
! GATTTTGTAATGAATTGCAG+GGG + chr5_2:56353222-56353241 Msa0777410:intron 30.0%
! AATTTGAAGGTTTCGGATTT+TGG + chr5_2:56353245-56353264 Msa0777410:CDS 30.0%
CTATACATCACCATCAAATT+TGG - chr5_2:56353452-56353471 None:intergenic 30.0%
!! CAAATTTGATGGTGATGTAT+AGG + chr5_2:56353450-56353469 Msa0777410:CDS 30.0%
TGTATAGGAAGATATATAGC+GGG + chr5_2:56353465-56353484 Msa0777410:CDS 30.0%
!! TAACTGTTGATGAGATTTTG+AGG + chr5_2:56353570-56353589 Msa0777410:CDS 30.0%
!! AACTGTTGATGAGATTTTGA+GGG + chr5_2:56353571-56353590 Msa0777410:CDS 30.0%
! TTATACCCTTTTCTAAACCA+AGG - chr5_2:56353599-56353618 None:intergenic 30.0%
! GTTTAGAAAAGGGTATAAAG+AGG + chr5_2:56353601-56353620 Msa0777410:CDS 30.0%
TGAGAAGAAGGTTAATAATG+GGG + chr5_2:56353652-56353671 Msa0777410:CDS 30.0%
!! ATTATATCGTTTTTCTCCAG+AGG + chr5_2:56353713-56353732 Msa0777410:CDS 30.0%
!! TTATATCGTTTTTCTCCAGA+GGG + chr5_2:56353714-56353733 Msa0777410:CDS 30.0%
!!! CTTTCTGGGTTTTTTATTGA+TGG + chr5_2:56353743-56353762 Msa0777410:CDS 30.0%
!!! TTTTTTATTGATGGTGGTGA+AGG + chr5_2:56353752-56353771 Msa0777410:CDS 30.0%
! TGGATTTTGTAATGAATTGC+AGG + chr5_2:56353220-56353239 Msa0777410:intron 30.0%
! GGATTTTGTAATGAATTGCA+GGG + chr5_2:56353221-56353240 Msa0777410:intron 30.0%
! GATTTTGTAATGAATTGCAG+GGG + chr5_2:56353222-56353241 Msa0777410:intron 30.0%
! AATTTGAAGGTTTCGGATTT+TGG + chr5_2:56353245-56353264 Msa0777410:CDS 30.0%
CTATACATCACCATCAAATT+TGG - chr5_2:56353452-56353471 None:intergenic 30.0%
!! CAAATTTGATGGTGATGTAT+AGG + chr5_2:56353450-56353469 Msa0777410:CDS 30.0%
TGTATAGGAAGATATATAGC+GGG + chr5_2:56353465-56353484 Msa0777410:CDS 30.0%
!! TAACTGTTGATGAGATTTTG+AGG + chr5_2:56353570-56353589 Msa0777410:CDS 30.0%
!! AACTGTTGATGAGATTTTGA+GGG + chr5_2:56353571-56353590 Msa0777410:CDS 30.0%
! TTATACCCTTTTCTAAACCA+AGG - chr5_2:56353599-56353618 None:intergenic 30.0%
! GTTTAGAAAAGGGTATAAAG+AGG + chr5_2:56353601-56353620 Msa0777410:CDS 30.0%
TGAGAAGAAGGTTAATAATG+GGG + chr5_2:56353652-56353671 Msa0777410:CDS 30.0%
!! ATTATATCGTTTTTCTCCAG+AGG + chr5_2:56353713-56353732 Msa0777410:CDS 30.0%
!! TTATATCGTTTTTCTCCAGA+GGG + chr5_2:56353714-56353733 Msa0777410:CDS 30.0%
!!! CTTTCTGGGTTTTTTATTGA+TGG + chr5_2:56353743-56353762 Msa0777410:CDS 30.0%
!!! TTTTTTATTGATGGTGGTGA+AGG + chr5_2:56353752-56353771 Msa0777410:CDS 30.0%
AAGAAAAAAATCACCGCAAC+AGG + chr5_2:56352800-56352819 Msa0777410:intron 35.0%
TTCGTCATCCGAATATTGTT+CGG + chr5_2:56352867-56352886 Msa0777410:intron 35.0%
TCATGAAGCCGAACAATATT+CGG - chr5_2:56352878-56352897 None:intergenic 35.0%
! TTTGTTATGGAGTTCGCTAA+AGG + chr5_2:56352926-56352945 Msa0777410:intron 35.0%
TTCGCCAAAATTGCGAATAA+AGG + chr5_2:56352959-56352978 Msa0777410:intron 35.0%
CCAAAATTGCGAATAAAGGA+CGG + chr5_2:56352963-56352982 Msa0777410:intron 35.0%
GTTGGATATTGTCATTCTCA+TGG + chr5_2:56353034-56353053 Msa0777410:intron 35.0%
! TTAGCGAGTGATTCTGATTT+TGG + chr5_2:56353138-56353157 Msa0777410:intron 35.0%
AAAGAGCAAGTTCGAATTGA+CGG + chr5_2:56353281-56353300 Msa0777410:CDS 35.0%
GTATAGGAAGATATATAGCG+GGG + chr5_2:56353466-56353485 Msa0777410:CDS 35.0%
! GATAAAAACCGCTTTAGATC+CGG - chr5_2:56353518-56353537 None:intergenic 35.0%
!! ATCTAAAGCGGTTTTTATCG+CGG + chr5_2:56353519-56353538 Msa0777410:CDS 35.0%
!! AGAGGTGAAGTTTTATGAAG+AGG + chr5_2:56353619-56353638 Msa0777410:CDS 35.0%
!! GAGGTGAAGTTTTATGAAGA+GGG + chr5_2:56353620-56353639 Msa0777410:CDS 35.0%
! GTTAATAATGGGGAAGAAGA+GGG + chr5_2:56353662-56353681 Msa0777410:CDS 35.0%
TCAAACGCATTGAAATCCAA+CGG - chr5_2:56353692-56353711 None:intergenic 35.0%
!!! TCTGGGTTTTTTATTGATGG+TGG + chr5_2:56353746-56353765 Msa0777410:CDS 35.0%
!! AGAATGGTGATTTGGTGATT+GGG + chr5_2:56353894-56353913 Msa0777410:CDS 35.0%
AAGTGTGGAAGAATAAGTTG+AGG + chr5_2:56353996-56354015 Msa0777410:CDS 35.0%
AAGAAAAAAATCACCGCAAC+AGG + chr5_2:56352800-56352819 Msa0777410:intron 35.0%
TTCGTCATCCGAATATTGTT+CGG + chr5_2:56352867-56352886 Msa0777410:intron 35.0%
TCATGAAGCCGAACAATATT+CGG - chr5_2:56352878-56352897 None:intergenic 35.0%
! TTTGTTATGGAGTTCGCTAA+AGG + chr5_2:56352926-56352945 Msa0777410:intron 35.0%
TTCGCCAAAATTGCGAATAA+AGG + chr5_2:56352959-56352978 Msa0777410:intron 35.0%
CCAAAATTGCGAATAAAGGA+CGG + chr5_2:56352963-56352982 Msa0777410:intron 35.0%
GTTGGATATTGTCATTCTCA+TGG + chr5_2:56353034-56353053 Msa0777410:intron 35.0%
! TTAGCGAGTGATTCTGATTT+TGG + chr5_2:56353138-56353157 Msa0777410:intron 35.0%
AAAGAGCAAGTTCGAATTGA+CGG + chr5_2:56353281-56353300 Msa0777410:CDS 35.0%
GTATAGGAAGATATATAGCG+GGG + chr5_2:56353466-56353485 Msa0777410:CDS 35.0%
! GATAAAAACCGCTTTAGATC+CGG - chr5_2:56353518-56353537 None:intergenic 35.0%
!! ATCTAAAGCGGTTTTTATCG+CGG + chr5_2:56353519-56353538 Msa0777410:CDS 35.0%
!! AGAGGTGAAGTTTTATGAAG+AGG + chr5_2:56353619-56353638 Msa0777410:CDS 35.0%
!! GAGGTGAAGTTTTATGAAGA+GGG + chr5_2:56353620-56353639 Msa0777410:CDS 35.0%
! GTTAATAATGGGGAAGAAGA+GGG + chr5_2:56353662-56353681 Msa0777410:CDS 35.0%
TCAAACGCATTGAAATCCAA+CGG - chr5_2:56353692-56353711 None:intergenic 35.0%
!!! TCTGGGTTTTTTATTGATGG+TGG + chr5_2:56353746-56353765 Msa0777410:CDS 35.0%
!! AGAATGGTGATTTGGTGATT+GGG + chr5_2:56353894-56353913 Msa0777410:CDS 35.0%
AAGTGTGGAAGAATAAGTTG+AGG + chr5_2:56353996-56354015 Msa0777410:CDS 35.0%
! CCGTCCTTTATTCGCAATTT+TGG - chr5_2:56352966-56352985 None:intergenic 40.0%
CAACAACTTATCTCTGCTGT+TGG + chr5_2:56353016-56353035 Msa0777410:intron 40.0%
TGAATTGCAGGGGAATTTGA+AGG + chr5_2:56353232-56353251 Msa0777410:intron 40.0%
AAGAGCAAGTTCGAATTGAC+GGG + chr5_2:56353282-56353301 Msa0777410:CDS 40.0%
TTAGCGAAGAGAGGTTATGA+TGG + chr5_2:56353353-56353372 Msa0777410:CDS 40.0%
ATGGAGCTAAGGTGGATATT+TGG + chr5_2:56353372-56353391 Msa0777410:CDS 40.0%
AAGGTGGATATTTGGTCATG+TGG + chr5_2:56353380-56353399 Msa0777410:CDS 40.0%
! ATCTTGTTTGTTCTTGTGGC+TGG + chr5_2:56353407-56353426 Msa0777410:CDS 40.0%
GGAATTTAAGTGTCCACGAT+GGG + chr5_2:56353487-56353506 Msa0777410:CDS 40.0%
!! ATGAGATTTTGAGGGATCCT+TGG + chr5_2:56353579-56353598 Msa0777410:CDS 40.0%
AGGGATCCTTGGTTTAGAAA+AGG + chr5_2:56353590-56353609 Msa0777410:CDS 40.0%
GGGATCCTTGGTTTAGAAAA+GGG + chr5_2:56353591-56353610 Msa0777410:CDS 40.0%
!!! GGGTTTTGAGTTTGAGAAGA+AGG + chr5_2:56353640-56353659 Msa0777410:CDS 40.0%
! GGTTAATAATGGGGAAGAAG+AGG + chr5_2:56353661-56353680 Msa0777410:CDS 40.0%
AAGGTGAGAGGTTTATGTTG+AGG + chr5_2:56353771-56353790 Msa0777410:CDS 40.0%
AGGTGAGAGGTTTATGTTGA+GGG + chr5_2:56353772-56353791 Msa0777410:CDS 40.0%
GTTTATGTTGAGGGAGTTAC+CGG + chr5_2:56353781-56353800 Msa0777410:CDS 40.0%
GTGGAAATTGAAGAGGAGAA+TGG + chr5_2:56353878-56353897 Msa0777410:CDS 40.0%
TGAAGAGGAGAATGGTGATT+TGG + chr5_2:56353886-56353905 Msa0777410:CDS 40.0%
!! GAGAATGGTGATTTGGTGAT+TGG + chr5_2:56353893-56353912 Msa0777410:CDS 40.0%
GGAACTCTCTTGTGTTATCT+AGG + chr5_2:56354161-56354180 Msa0777410:three_prime_UTR 40.0%
GTGGAAGTAACCTGAGAAAA+TGG + chr5_2:56354269-56354288 Msa0777410:three_prime_UTR 40.0%
! CCACAAACATCCATTTTCTC+AGG - chr5_2:56354282-56354301 None:intergenic 40.0%
CCTGAGAAAATGGATGTTTG+TGG + chr5_2:56354279-56354298 Msa0777410:three_prime_UTR 40.0%
! CCGTCCTTTATTCGCAATTT+TGG - chr5_2:56352966-56352985 None:intergenic 40.0%
CAACAACTTATCTCTGCTGT+TGG + chr5_2:56353016-56353035 Msa0777410:intron 40.0%
TGAATTGCAGGGGAATTTGA+AGG + chr5_2:56353232-56353251 Msa0777410:intron 40.0%
AAGAGCAAGTTCGAATTGAC+GGG + chr5_2:56353282-56353301 Msa0777410:CDS 40.0%
TTAGCGAAGAGAGGTTATGA+TGG + chr5_2:56353353-56353372 Msa0777410:CDS 40.0%
ATGGAGCTAAGGTGGATATT+TGG + chr5_2:56353372-56353391 Msa0777410:CDS 40.0%
AAGGTGGATATTTGGTCATG+TGG + chr5_2:56353380-56353399 Msa0777410:CDS 40.0%
! ATCTTGTTTGTTCTTGTGGC+TGG + chr5_2:56353407-56353426 Msa0777410:CDS 40.0%
GGAATTTAAGTGTCCACGAT+GGG + chr5_2:56353487-56353506 Msa0777410:CDS 40.0%
!! ATGAGATTTTGAGGGATCCT+TGG + chr5_2:56353579-56353598 Msa0777410:CDS 40.0%
AGGGATCCTTGGTTTAGAAA+AGG + chr5_2:56353590-56353609 Msa0777410:CDS 40.0%
GGGATCCTTGGTTTAGAAAA+GGG + chr5_2:56353591-56353610 Msa0777410:CDS 40.0%
!!! GGGTTTTGAGTTTGAGAAGA+AGG + chr5_2:56353640-56353659 Msa0777410:CDS 40.0%
! GGTTAATAATGGGGAAGAAG+AGG + chr5_2:56353661-56353680 Msa0777410:CDS 40.0%
AAGGTGAGAGGTTTATGTTG+AGG + chr5_2:56353771-56353790 Msa0777410:CDS 40.0%
AGGTGAGAGGTTTATGTTGA+GGG + chr5_2:56353772-56353791 Msa0777410:CDS 40.0%
GTTTATGTTGAGGGAGTTAC+CGG + chr5_2:56353781-56353800 Msa0777410:CDS 40.0%
GTGGAAATTGAAGAGGAGAA+TGG + chr5_2:56353878-56353897 Msa0777410:CDS 40.0%
TGAAGAGGAGAATGGTGATT+TGG + chr5_2:56353886-56353905 Msa0777410:CDS 40.0%
!! GAGAATGGTGATTTGGTGAT+TGG + chr5_2:56353893-56353912 Msa0777410:CDS 40.0%
GGAACTCTCTTGTGTTATCT+AGG + chr5_2:56354161-56354180 Msa0777410:three_prime_UTR 40.0%
GTGGAAGTAACCTGAGAAAA+TGG + chr5_2:56354269-56354288 Msa0777410:three_prime_UTR 40.0%
! CCACAAACATCCATTTTCTC+AGG - chr5_2:56354282-56354301 None:intergenic 40.0%
CCTGAGAAAATGGATGTTTG+TGG + chr5_2:56354279-56354298 Msa0777410:three_prime_UTR 40.0%
GTTATGGAGTTCGCTAAAGG+TGG + chr5_2:56352929-56352948 Msa0777410:intron 45.0%
GCAGGGGAATTTGAAGGTTT+CGG + chr5_2:56353238-56353257 Msa0777410:intron 45.0%
AACACCTGCATATGTTGCAC+CGG + chr5_2:56353325-56353344 Msa0777410:CDS 45.0%
CCTCTCTTCGCTAAAATCTC+CGG - chr5_2:56353347-56353366 None:intergenic 45.0%
! GAGAGGTTATGATGGAGCTA+AGG + chr5_2:56353361-56353380 Msa0777410:CDS 45.0%
! AGGTTATGATGGAGCTAAGG+TGG + chr5_2:56353364-56353383 Msa0777410:CDS 45.0%
GGGAATTTAAGTGTCCACGA+TGG + chr5_2:56353486-56353505 Msa0777410:CDS 45.0%
TCAACAGTTATCCTCGTCTC+CGG - chr5_2:56353560-56353579 None:intergenic 45.0%
TCCAGAGGGTTGAATCTTTC+TGG + chr5_2:56353728-56353747 Msa0777410:CDS 45.0%
CCAGAGGGTTGAATCTTTCT+GGG + chr5_2:56353729-56353748 Msa0777410:CDS 45.0%
TGAGGAGGAAGAAGGAATGT+GGG + chr5_2:56353855-56353874 Msa0777410:CDS 45.0%
ATGTGGGGTGGAAATTGAAG+AGG + chr5_2:56353871-56353890 Msa0777410:CDS 45.0%
! TTACCGATTAACCGCTGAGA+TGG + chr5_2:56353925-56353944 Msa0777410:CDS 45.0%
CAACCATCTCAGCGGTTAAT+CGG - chr5_2:56353931-56353950 None:intergenic 45.0%
ATTAACCGCTGAGATGGTTG+TGG + chr5_2:56353931-56353950 Msa0777410:CDS 45.0%
! TTGAGGTGAAGAGGTTTGGT+GGG + chr5_2:56353954-56353973 Msa0777410:CDS 45.0%
GTTATGGAGTTCGCTAAAGG+TGG + chr5_2:56352929-56352948 Msa0777410:intron 45.0%
GCAGGGGAATTTGAAGGTTT+CGG + chr5_2:56353238-56353257 Msa0777410:intron 45.0%
AACACCTGCATATGTTGCAC+CGG + chr5_2:56353325-56353344 Msa0777410:CDS 45.0%
CCTCTCTTCGCTAAAATCTC+CGG - chr5_2:56353347-56353366 None:intergenic 45.0%
! GAGAGGTTATGATGGAGCTA+AGG + chr5_2:56353361-56353380 Msa0777410:CDS 45.0%
! AGGTTATGATGGAGCTAAGG+TGG + chr5_2:56353364-56353383 Msa0777410:CDS 45.0%
GGGAATTTAAGTGTCCACGA+TGG + chr5_2:56353486-56353505 Msa0777410:CDS 45.0%
TCAACAGTTATCCTCGTCTC+CGG - chr5_2:56353560-56353579 None:intergenic 45.0%
TCCAGAGGGTTGAATCTTTC+TGG + chr5_2:56353728-56353747 Msa0777410:CDS 45.0%
CCAGAGGGTTGAATCTTTCT+GGG + chr5_2:56353729-56353748 Msa0777410:CDS 45.0%
TGAGGAGGAAGAAGGAATGT+GGG + chr5_2:56353855-56353874 Msa0777410:CDS 45.0%
ATGTGGGGTGGAAATTGAAG+AGG + chr5_2:56353871-56353890 Msa0777410:CDS 45.0%
! TTACCGATTAACCGCTGAGA+TGG + chr5_2:56353925-56353944 Msa0777410:CDS 45.0%
CAACCATCTCAGCGGTTAAT+CGG - chr5_2:56353931-56353950 None:intergenic 45.0%
ATTAACCGCTGAGATGGTTG+TGG + chr5_2:56353931-56353950 Msa0777410:CDS 45.0%
! TTGAGGTGAAGAGGTTTGGT+GGG + chr5_2:56353954-56353973 Msa0777410:CDS 45.0%
!! ATATATAAAAAAAACTATTA+TGG + chr5_2:56354140-56354159 Msa0777410:three_prime_UTR 5.0%
!! ATATATAAAAAAAACTATTA+TGG + chr5_2:56354140-56354159 Msa0777410:three_prime_UTR 5.0%
CTCGTATTTGCCGAAGAGTG+CGG - chr5_2:56352687-56352706 None:intergenic 50.0%
CTCTTCGGCAAATACGAGCT+CGG + chr5_2:56352689-56352708 Msa0777410:CDS 50.0%
TACGAGCTCGGCAAACTCTT+AGG + chr5_2:56352701-56352720 Msa0777410:CDS 50.0%
CTCGGCAAACTCTTAGGATG+CGG + chr5_2:56352707-56352726 Msa0777410:CDS 50.0%
! TTGCGAAAGTATACCACGCG+CGG + chr5_2:56352735-56352754 Msa0777410:CDS 50.0%
ATGTCCAGCAAGTCCTGTTG+CGG - chr5_2:56352816-56352835 None:intergenic 50.0%
GGGATGTTACACACGCTTTG+TGG + chr5_2:56353302-56353321 Msa0777410:CDS 50.0%
ATCTCCGGTGCAACATATGC+AGG - chr5_2:56353332-56353351 None:intergenic 50.0%
!! CCGGAGATTTTAGCGAAGAG+AGG + chr5_2:56353344-56353363 Msa0777410:CDS 50.0%
GGGTTTCACCGGATCTAAAG+CGG + chr5_2:56353507-56353526 Msa0777410:CDS 50.0%
! GCGGTTTTTATCGCGGTTGA+TGG + chr5_2:56353526-56353545 Msa0777410:CDS 50.0%
!! GCGGTTGATGGATACGAATC+CGG + chr5_2:56353538-56353557 Msa0777410:CDS 50.0%
GGAAGAAGAGGGAAAACCGT+TGG + chr5_2:56353673-56353692 Msa0777410:CDS 50.0%
CCCAGAAAGATTCAACCCTC+TGG - chr5_2:56353732-56353751 None:intergenic 50.0%
!! TTGATGGTGGTGAAGGTGAG+AGG + chr5_2:56353759-56353778 Msa0777410:CDS 50.0%
GTGAGGAGGAAGAAGGAATG+TGG + chr5_2:56353854-56353873 Msa0777410:CDS 50.0%
GAGGAGGAAGAAGGAATGTG+GGG + chr5_2:56353856-56353875 Msa0777410:CDS 50.0%
CTCAACCACAACCATCTCAG+CGG - chr5_2:56353939-56353958 None:intergenic 50.0%
TGGTTGTGGTTGAGGTGAAG+AGG + chr5_2:56353945-56353964 Msa0777410:CDS 50.0%
GTGGTTGAGGTGAAGAGGTT+TGG + chr5_2:56353950-56353969 Msa0777410:CDS 50.0%
GTTGAGGTGAAGAGGTTTGG+TGG + chr5_2:56353953-56353972 Msa0777410:CDS 50.0%
!! TGAGGTGAAGAGGTTTGGTG+GGG + chr5_2:56353955-56353974 Msa0777410:CDS 50.0%
GTCGTTGCATCGCACAAATG+TGG - chr5_2:56354022-56354041 None:intergenic 50.0%
CTCACTAGTCAGCACTAGCA+GGG - chr5_2:56354078-56354097 None:intergenic 50.0%
TCTCACTAGTCAGCACTAGC+AGG - chr5_2:56354079-56354098 None:intergenic 50.0%
CTCGTATTTGCCGAAGAGTG+CGG - chr5_2:56352687-56352706 None:intergenic 50.0%
CTCTTCGGCAAATACGAGCT+CGG + chr5_2:56352689-56352708 Msa0777410:CDS 50.0%
TACGAGCTCGGCAAACTCTT+AGG + chr5_2:56352701-56352720 Msa0777410:CDS 50.0%
CTCGGCAAACTCTTAGGATG+CGG + chr5_2:56352707-56352726 Msa0777410:CDS 50.0%
! TTGCGAAAGTATACCACGCG+CGG + chr5_2:56352735-56352754 Msa0777410:CDS 50.0%
ATGTCCAGCAAGTCCTGTTG+CGG - chr5_2:56352816-56352835 None:intergenic 50.0%
GGGATGTTACACACGCTTTG+TGG + chr5_2:56353302-56353321 Msa0777410:CDS 50.0%
ATCTCCGGTGCAACATATGC+AGG - chr5_2:56353332-56353351 None:intergenic 50.0%
!! CCGGAGATTTTAGCGAAGAG+AGG + chr5_2:56353344-56353363 Msa0777410:CDS 50.0%
GGGTTTCACCGGATCTAAAG+CGG + chr5_2:56353507-56353526 Msa0777410:CDS 50.0%
! GCGGTTTTTATCGCGGTTGA+TGG + chr5_2:56353526-56353545 Msa0777410:CDS 50.0%
!! GCGGTTGATGGATACGAATC+CGG + chr5_2:56353538-56353557 Msa0777410:CDS 50.0%
GGAAGAAGAGGGAAAACCGT+TGG + chr5_2:56353673-56353692 Msa0777410:CDS 50.0%
CCCAGAAAGATTCAACCCTC+TGG - chr5_2:56353732-56353751 None:intergenic 50.0%
!! TTGATGGTGGTGAAGGTGAG+AGG + chr5_2:56353759-56353778 Msa0777410:CDS 50.0%
GTGAGGAGGAAGAAGGAATG+TGG + chr5_2:56353854-56353873 Msa0777410:CDS 50.0%
GAGGAGGAAGAAGGAATGTG+GGG + chr5_2:56353856-56353875 Msa0777410:CDS 50.0%
CTCAACCACAACCATCTCAG+CGG - chr5_2:56353939-56353958 None:intergenic 50.0%
TGGTTGTGGTTGAGGTGAAG+AGG + chr5_2:56353945-56353964 Msa0777410:CDS 50.0%
GTGGTTGAGGTGAAGAGGTT+TGG + chr5_2:56353950-56353969 Msa0777410:CDS 50.0%
GTTGAGGTGAAGAGGTTTGG+TGG + chr5_2:56353953-56353972 Msa0777410:CDS 50.0%
!! TGAGGTGAAGAGGTTTGGTG+GGG + chr5_2:56353955-56353974 Msa0777410:CDS 50.0%
GTCGTTGCATCGCACAAATG+TGG - chr5_2:56354022-56354041 None:intergenic 50.0%
CTCACTAGTCAGCACTAGCA+GGG - chr5_2:56354078-56354097 None:intergenic 50.0%
TCTCACTAGTCAGCACTAGC+AGG - chr5_2:56354079-56354098 None:intergenic 50.0%
! GTATTTGCCGAAGAGTGCGG+TGG - chr5_2:56352684-56352703 None:intergenic 55.0%
AGTATACCACGCGCGGAACA+CGG + chr5_2:56352742-56352761 Msa0777410:CDS 55.0%
ATCACCGCAACAGGACTTGC+TGG + chr5_2:56352809-56352828 Msa0777410:intron 55.0%
! GTGTCCACGATGGGTTTCAC+CGG + chr5_2:56353496-56353515 Msa0777410:CDS 55.0%
AGATCCGGTGAAACCCATCG+TGG - chr5_2:56353503-56353522 None:intergenic 55.0%
TGGATACGAATCCGGAGACG+AGG + chr5_2:56353546-56353565 Msa0777410:CDS 55.0%
GTTGAGGGAGTTACCGGAGA+AGG + chr5_2:56353787-56353806 Msa0777410:CDS 55.0%
GGAGTTACCGGAGAAGGTTG+TGG + chr5_2:56353793-56353812 Msa0777410:CDS 55.0%
ACCGGAGAAGGTTGTGGAGA+AGG + chr5_2:56353799-56353818 Msa0777410:CDS 55.0%
GCCTTCTCCACAACCTTCTC+CGG - chr5_2:56353803-56353822 None:intergenic 55.0%
GAAGGTTGTGGAGAAGGCTG+AGG + chr5_2:56353805-56353824 Msa0777410:CDS 55.0%
GCTTGTGGTGAGGAGGAAGA+AGG + chr5_2:56353847-56353866 Msa0777410:CDS 55.0%
GAGGAAGAAGGAATGTGGGG+TGG + chr5_2:56353859-56353878 Msa0777410:CDS 55.0%
CGCTGAGATGGTTGTGGTTG+AGG + chr5_2:56353937-56353956 Msa0777410:CDS 55.0%
!! GAAGAGGTTTGGTGGGGATG+CGG + chr5_2:56353961-56353980 Msa0777410:CDS 55.0%
! CGGTTGCTTTCGAGGAAGTG+TGG + chr5_2:56353981-56354000 Msa0777410:CDS 55.0%
! CATGAGACTGAGGTTGGTCC+TGG - chr5_2:56354051-56354070 None:intergenic 55.0%
GGACCAACCTCAGTCTCATG+CGG + chr5_2:56354051-56354070 Msa0777410:CDS 55.0%
! GTATTTGCCGAAGAGTGCGG+TGG - chr5_2:56352684-56352703 None:intergenic 55.0%
AGTATACCACGCGCGGAACA+CGG + chr5_2:56352742-56352761 Msa0777410:CDS 55.0%
ATCACCGCAACAGGACTTGC+TGG + chr5_2:56352809-56352828 Msa0777410:intron 55.0%
! GTGTCCACGATGGGTTTCAC+CGG + chr5_2:56353496-56353515 Msa0777410:CDS 55.0%
AGATCCGGTGAAACCCATCG+TGG - chr5_2:56353503-56353522 None:intergenic 55.0%
TGGATACGAATCCGGAGACG+AGG + chr5_2:56353546-56353565 Msa0777410:CDS 55.0%
GTTGAGGGAGTTACCGGAGA+AGG + chr5_2:56353787-56353806 Msa0777410:CDS 55.0%
GGAGTTACCGGAGAAGGTTG+TGG + chr5_2:56353793-56353812 Msa0777410:CDS 55.0%
ACCGGAGAAGGTTGTGGAGA+AGG + chr5_2:56353799-56353818 Msa0777410:CDS 55.0%
GCCTTCTCCACAACCTTCTC+CGG - chr5_2:56353803-56353822 None:intergenic 55.0%
GAAGGTTGTGGAGAAGGCTG+AGG + chr5_2:56353805-56353824 Msa0777410:CDS 55.0%
GCTTGTGGTGAGGAGGAAGA+AGG + chr5_2:56353847-56353866 Msa0777410:CDS 55.0%
GAGGAAGAAGGAATGTGGGG+TGG + chr5_2:56353859-56353878 Msa0777410:CDS 55.0%
CGCTGAGATGGTTGTGGTTG+AGG + chr5_2:56353937-56353956 Msa0777410:CDS 55.0%
!! GAAGAGGTTTGGTGGGGATG+CGG + chr5_2:56353961-56353980 Msa0777410:CDS 55.0%
! CGGTTGCTTTCGAGGAAGTG+TGG + chr5_2:56353981-56354000 Msa0777410:CDS 55.0%
! CATGAGACTGAGGTTGGTCC+TGG - chr5_2:56354051-56354070 None:intergenic 55.0%
GGACCAACCTCAGTCTCATG+CGG + chr5_2:56354051-56354070 Msa0777410:CDS 55.0%
ACCACCACCACCGCACTCTT+CGG + chr5_2:56352674-56352693 Msa0777410:CDS 60.0%
! TTTGCCGAAGAGTGCGGTGG+TGG - chr5_2:56352681-56352700 None:intergenic 60.0%
CACGGAGAATGGACAGAGCG+TGG + chr5_2:56352760-56352779 Msa0777410:intron 60.0%
! TGGGGATGCGGTTGCTTTCG+AGG + chr5_2:56353973-56353992 Msa0777410:CDS 60.0%
CGATGCAACGACGTCGAACC+AGG + chr5_2:56354030-56354049 Msa0777410:CDS 60.0%
GGACCGCATGAGACTGAGGT+TGG - chr5_2:56354057-56354076 None:intergenic 60.0%
ACCACCACCACCGCACTCTT+CGG + chr5_2:56352674-56352693 Msa0777410:CDS 60.0%
! TTTGCCGAAGAGTGCGGTGG+TGG - chr5_2:56352681-56352700 None:intergenic 60.0%
CACGGAGAATGGACAGAGCG+TGG + chr5_2:56352760-56352779 Msa0777410:intron 60.0%
! TGGGGATGCGGTTGCTTTCG+AGG + chr5_2:56353973-56353992 Msa0777410:CDS 60.0%
CGATGCAACGACGTCGAACC+AGG + chr5_2:56354030-56354049 Msa0777410:CDS 60.0%
GGACCGCATGAGACTGAGGT+TGG - chr5_2:56354057-56354076 None:intergenic 60.0%
!! GTGGTGGTGGAGGCATCTGC+CGG - chr5_2:56352662-56352681 None:intergenic 65.0%
!! GAAGAGTGCGGTGGTGGTGG+TGG - chr5_2:56352675-56352694 None:intergenic 65.0%
CATTCTCCGTGTTCCGCGCG+TGG - chr5_2:56352751-56352770 None:intergenic 65.0%
CACGCGCGGAACACGGAGAA+TGG + chr5_2:56352749-56352768 Msa0777410:CDS 65.0%
CACAAGCCCCTCTGCCTTCG+CGG - chr5_2:56353834-56353853 None:intergenic 65.0%
AGGCAGAGGGGCTTGTGGTG+AGG + chr5_2:56353837-56353856 Msa0777410:CDS 65.0%
CAGAGGGGCTTGTGGTGAGG+AGG + chr5_2:56353840-56353859 Msa0777410:CDS 65.0%
GCAGGGACCGCATGAGACTG+AGG - chr5_2:56354061-56354080 None:intergenic 65.0%
!! GTGGTGGTGGAGGCATCTGC+CGG - chr5_2:56352662-56352681 None:intergenic 65.0%
!! GAAGAGTGCGGTGGTGGTGG+TGG - chr5_2:56352675-56352694 None:intergenic 65.0%
CATTCTCCGTGTTCCGCGCG+TGG - chr5_2:56352751-56352770 None:intergenic 65.0%
CACGCGCGGAACACGGAGAA+TGG + chr5_2:56352749-56352768 Msa0777410:CDS 65.0%
CACAAGCCCCTCTGCCTTCG+CGG - chr5_2:56353834-56353853 None:intergenic 65.0%
AGGCAGAGGGGCTTGTGGTG+AGG + chr5_2:56353837-56353856 Msa0777410:CDS 65.0%
CAGAGGGGCTTGTGGTGAGG+AGG + chr5_2:56353840-56353859 Msa0777410:CDS 65.0%
GCAGGGACCGCATGAGACTG+AGG - chr5_2:56354061-56354080 None:intergenic 65.0%
ACAGGCAGCAGCGCCAGCTC+CGG + chr5_2:56352640-56352659 Msa0777410:CDS 70.0%
!! GTGGAGGCATCTGCCGGAGC+TGG - chr5_2:56352656-56352675 None:intergenic 70.0%
!! GAGTGCGGTGGTGGTGGTGG+AGG - chr5_2:56352672-56352691 None:intergenic 70.0%
! GCCGAAGAGTGCGGTGGTGG+TGG - chr5_2:56352678-56352697 None:intergenic 70.0%
GAAGGCTGAGGCAGCCGCGA+AGG + chr5_2:56353817-56353836 Msa0777410:CDS 70.0%
TGAGGCAGCCGCGAAGGCAG+AGG + chr5_2:56353823-56353842 Msa0777410:CDS 70.0%
GAGGCAGCCGCGAAGGCAGA+GGG + chr5_2:56353824-56353843 Msa0777410:CDS 70.0%
AGGCAGCCGCGAAGGCAGAG+GGG + chr5_2:56353825-56353844 Msa0777410:CDS 70.0%
CGCGAAGGCAGAGGGGCTTG+TGG + chr5_2:56353832-56353851 Msa0777410:CDS 70.0%
ACAGGCAGCAGCGCCAGCTC+CGG + chr5_2:56352640-56352659 Msa0777410:CDS 70.0%
!! GTGGAGGCATCTGCCGGAGC+TGG - chr5_2:56352656-56352675 None:intergenic 70.0%
!! GAGTGCGGTGGTGGTGGTGG+AGG - chr5_2:56352672-56352691 None:intergenic 70.0%
! GCCGAAGAGTGCGGTGGTGG+TGG - chr5_2:56352678-56352697 None:intergenic 70.0%
GAAGGCTGAGGCAGCCGCGA+AGG + chr5_2:56353817-56353836 Msa0777410:CDS 70.0%
TGAGGCAGCCGCGAAGGCAG+AGG + chr5_2:56353823-56353842 Msa0777410:CDS 70.0%
GAGGCAGCCGCGAAGGCAGA+GGG + chr5_2:56353824-56353843 Msa0777410:CDS 70.0%
AGGCAGCCGCGAAGGCAGAG+GGG + chr5_2:56353825-56353844 Msa0777410:CDS 70.0%
CGCGAAGGCAGAGGGGCTTG+TGG + chr5_2:56353832-56353851 Msa0777410:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 56352626 56354323 56352626 ID=Msa0777410;Name=Msa0777410
chr5_2 mRNA 56352626 56354323 56352626 ID=Msa0777410-mRNA-1;Parent=Msa0777410;Name=Msa0777410-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0.5|1|0|0.5|2|230|334
chr5_2 exon 56352626 56352778 56352626 ID=Msa0777410-mRNA-1:exon:16665;Parent=Msa0777410-mRNA-1
chr5_2 exon 56353242 56354323 56353242 ID=Msa0777410-mRNA-1:exon:16666;Parent=Msa0777410-mRNA-1
chr5_2 CDS 56352626 56352778 56352626 ID=Msa0777410-mRNA-1:cds;Parent=Msa0777410-mRNA-1
chr5_2 CDS 56353242 56354093 56353242 ID=Msa0777410-mRNA-1:cds;Parent=Msa0777410-mRNA-1
chr5_2 three_prime_UTR 56354094 56354323 56354094 ID=Msa0777410-mRNA-1:three_prime_utr;Parent=Msa0777410-mRNA-1
Gene Sequence

>Msa0777410

ATGTCGGATATCGAACAGGCAGCAGCGCCAGCTCCGGCAGATGCCTCCACCACCACCACCGCACTCTTCGGCAAATACGAGCTCGGCAAACTCTTAGGATGCGGCGCGTTTGCGAAAGTATACCACGCGCGGAACACGGAGAATGGACAGAGCGGGAATTTGAAGGTTTCGGATTTTGGTTTGAGTGCAGTGAAAGAGCAAGTTCGAATTGACGGGATGTTACACACGCTTTGTGGAACACCTGCATATGTTGCACCGGAGATTTTAGCGAAGAGAGGTTATGATGGAGCTAAGGTGGATATTTGGTCATGTGGTATTATCTTGTTTGTTCTTGTGGCTGGTTATCTTCCATTTAATGATCCAAATTTGATGGTGATGTATAGGAAGATATATAGCGGGGAATTTAAGTGTCCACGATGGGTTTCACCGGATCTAAAGCGGTTTTTATCGCGGTTGATGGATACGAATCCGGAGACGAGGATAACTGTTGATGAGATTTTGAGGGATCCTTGGTTTAGAAAAGGGTATAAAGAGGTGAAGTTTTATGAAGAGGGTTTTGAGTTTGAGAAGAAGGTTAATAATGGGGAAGAAGAGGGAAAACCGTTGGATTTCAATGCGTTTGATATTATATCGTTTTTCTCCAGAGGGTTGAATCTTTCTGGGTTTTTTATTGATGGTGGTGAAGGTGAGAGGTTTATGTTGAGGGAGTTACCGGAGAAGGTTGTGGAGAAGGCTGAGGCAGCCGCGAAGGCAGAGGGGCTTGTGGTGAGGAGGAAGAAGGAATGTGGGGTGGAAATTGAAGAGGAGAATGGTGATTTGGTGATTGGGATTGAGATTTACCGATTAACCGCTGAGATGGTTGTGGTTGAGGTGAAGAGGTTTGGTGGGGATGCGGTTGCTTTCGAGGAAGTGTGGAAGAATAAGTTGAGGCCACATTTGTGCGATGCAACGACGTCGAACCAGGACCAACCTCAGTCTCATGCGGTCCCTGCTAGTGCTGACTAG
Protein sequence

>Msa0777410

MSDIEQAAAPAPADASTTTTALFGKYELGKLLGCGAFAKVYHARNTENGQSGNLKVSDFGLSAVKEQVRIDGMLHTLCGTPAYVAPEILAKRGYDGAKVDIWSCGIILFVLVAGYLPFNDPNLMVMYRKIYSGEFKCPRWVSPDLKRFLSRLMDTNPETRITVDEILRDPWFRKGYKEVKFYEEGFEFEKKVNNGEEEGKPLDFNAFDIISFFSRGLNLSGFFIDGGEGERFMLRELPEKVVEKAEAAAKAEGLVVRRKKECGVEIEEENGDLVIGIEIYRLTAEMVVVEVKRFGGDAVAFEEVWKNKLRPHLCDATTSNQDQPQSHAVPASAD*