AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0780620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0780620 MtrunA17_Chr5g0441821 94.872 975 26 4 1 952 1 974 0.0 1902
Msa0780620 MtrunA17_Chr3g0094441 66.429 983 291 12 1 952 1 975 0.0 1278
Msa0780620 MtrunA17_Chr2g0282381 28.389 627 376 14 46 632 44 637 5.54e-59 219
Msa0780620 MtrunA17_Chr7g0227321 76.596 47 11 0 57 103 1 47 2.29e-18 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0780620 AT5G19400.4 44.643 1064 440 29 1 952 1 1027 0.0 827
Msa0780620 AT5G19400.5 44.643 1064 440 29 1 952 1 1027 0.0 827
Msa0780620 AT5G19400.2 50.338 739 310 16 1 700 1 721 0.0 714
Msa0780620 AT5G19400.2 39.464 261 124 12 703 952 822 1059 3.07e-36 149
Msa0780620 AT5G19400.1 50.338 739 310 16 1 700 1 721 0.0 714
Msa0780620 AT5G19400.1 39.464 261 124 12 703 952 822 1059 3.07e-36 149
Msa0780620 AT5G19400.3 50.338 739 310 16 1 700 1 721 0.0 714
Msa0780620 AT5G19400.3 39.464 261 124 12 703 952 822 1059 3.07e-36 149
Msa0780620 AT1G28260.1 26.357 645 351 20 54 661 50 607 1.56e-48 187
Msa0780620 AT1G28260.2 26.357 645 351 20 54 661 50 607 1.56e-48 187

Find 282 sgRNAs with CRISPR-Local

Find 518 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCCATTAGATCAAAATTT+TGG 0.128973 5_2:-62637827 Msa0780620:CDS
CAAAGTTACTCTCAGCTTTC+TGG 0.155045 5_2:-62638554 Msa0780620:CDS
GCCTGCTTCTGCTGGTTATA+TGG 0.164249 5_2:-62637133 Msa0780620:CDS
GAAGAAGAAGAGGAAGAAAT+TGG 0.189828 5_2:+62641594 None:intergenic
GCTTTGTTGGCTTCATATTA+TGG 0.193194 5_2:-62639505 Msa0780620:CDS
GTCAATGAATGTTTGATTAA+TGG 0.201816 5_2:-62641204 Msa0780620:five_prime_UTR
CTACTTTGCTACATGTGTTT+AGG 0.207060 5_2:-62635464 Msa0780620:three_prime_UTR
GGTAAAATTTCTTACATTAA+AGG 0.209285 5_2:+62635639 None:intergenic
TACTTTGCTACATGTGTTTA+GGG 0.214056 5_2:-62635463 Msa0780620:three_prime_UTR
GACTGTTATTGGAGTTTATT+TGG 0.218671 5_2:-62636154 Msa0780620:three_prime_UTR
ACGCAACTGTGGCCAAATAT+TGG 0.234682 5_2:+62640194 None:intergenic
AGGCTTTATCTAACATTGTT+AGG 0.238337 5_2:-62637533 Msa0780620:CDS
ATGAAAATCAAAGCAAAGTA+TGG 0.239184 5_2:-62639919 Msa0780620:CDS
GTTCGCTTCTCGGCTATTAT+AGG 0.241383 5_2:+62637291 None:intergenic
CCCAACTAGTTTGAAGCTTT+GGG 0.251091 5_2:+62635572 None:intergenic
CCTGCTTCTGCTGGTTATAT+GGG 0.261254 5_2:-62637132 Msa0780620:CDS
CCCCAACTAGTTTGAAGCTT+TGG 0.261885 5_2:+62635571 None:intergenic
TTCTTGTCAGTGACTGTTAT+TGG 0.267509 5_2:-62636165 Msa0780620:three_prime_UTR
CAAGATGAAAAGCTGAATTT+TGG 0.273513 5_2:-62638149 Msa0780620:CDS
CCTGTGGTTTGTTCGCTTAT+TGG 0.276009 5_2:-62635680 Msa0780620:three_prime_UTR
CTCCAGTCAGCCGTCCTTCT+AGG 0.281343 5_2:-62636771 Msa0780620:CDS
ATATACAAGCTGCGTCTATT+TGG 0.282148 5_2:-62639699 Msa0780620:CDS
AAGGGAAAGAAATTTATAAT+TGG 0.285940 5_2:-62637480 Msa0780620:CDS
CACAGTTCATAATGTGAATA+AGG 0.288347 5_2:-62638069 Msa0780620:CDS
TCCCGTCAGATCCCAATATT+TGG 0.288930 5_2:-62640206 Msa0780620:CDS
TTATTTGCTGGGTATTTGTT+TGG 0.291420 5_2:+62636575 None:intergenic
AATCGGTGGAAATTAGGATT+AGG 0.298849 5_2:+62641659 None:intergenic
ACTCGCTTTGTCCGTCTAAA+TGG 0.300466 5_2:-62638371 Msa0780620:CDS
GTGGAGAATCGGTGGAAATT+AGG 0.311075 5_2:+62641653 None:intergenic
TCAATTTCAGCTGGCTTTGT+TGG 0.312970 5_2:-62639518 Msa0780620:intron
TTATCTCTAGCAGTTGTAAA+TGG 0.320535 5_2:+62639430 None:intergenic
AAATATTGTTATTTATTTGC+TGG 0.321988 5_2:+62636563 None:intergenic
CCAGCTTGCTTTCCCTTCCC+TGG 0.322055 5_2:-62636532 Msa0780620:CDS
TACCACATCTGTTCGCTTCT+CGG 0.322125 5_2:+62637281 None:intergenic
ATCGGTGGAAATTAGGATTA+GGG 0.330522 5_2:+62641660 None:intergenic
CCAACTGTAATCGTCCATAA+TGG 0.332144 5_2:+62636663 None:intergenic
GTTGACACTGTTGCATCTTC+CGG 0.335006 5_2:-62636856 Msa0780620:CDS
CGCAACTGTGGCCAAATATT+GGG 0.335177 5_2:+62640195 None:intergenic
CCTTCATCAACCAAAGCTTT+AGG 0.339318 5_2:-62636622 Msa0780620:CDS
GGAGCGTGCACAACGCCTTT+TGG 0.342561 5_2:-62641137 Msa0780620:CDS
GAGCCTGTCCCAACAGCTTC+AGG 0.343674 5_2:-62637225 Msa0780620:CDS
GTTTGCATGACAAGTGATAT+TGG 0.344314 5_2:-62635410 Msa0780620:three_prime_UTR
TGTTTGATGGTTTACATCAT+TGG 0.351527 5_2:+62637161 None:intergenic
TCTCCCTGCACAAACGATCT+TGG 0.351717 5_2:-62637637 Msa0780620:CDS
AATAATATCTGTTGGATTGT+TGG 0.356139 5_2:-62635335 Msa0780620:three_prime_UTR
AATTAGTGGGAATCCCATTA+TGG 0.358302 5_2:-62636677 Msa0780620:CDS
GCAGCAGACAAGCCAAAGTT+AGG 0.360105 5_2:-62637381 Msa0780620:CDS
CCCAAAGCTTCAAACTAGTT+GGG 0.362265 5_2:-62635572 Msa0780620:three_prime_UTR
AAGAAGAAGAGGAAGAAATT+GGG 0.364475 5_2:+62641595 None:intergenic
AGAGAGATGCATCCAGTTGC+AGG 0.372519 5_2:-62637952 Msa0780620:CDS
AGAGAGAGAAAGAGAGAGAT+AGG 0.374926 5_2:+62641691 None:intergenic
CCCCAAAGCTTCAAACTAGT+TGG 0.375427 5_2:-62635573 Msa0780620:three_prime_UTR
ATTTGGCCTAGACTTGTTGC+AGG 0.375797 5_2:-62636137 Msa0780620:three_prime_UTR
TCCACATGCTGGTGGCGGTC+TGG 0.378312 5_2:+62637348 None:intergenic
AATTATAAATTTCTTTCCCT+TGG 0.379592 5_2:+62637482 None:intergenic
GGAAAATTGACCTGTGAGAT+TGG 0.380744 5_2:+62641618 None:intergenic
GGGATAATAAAGTTTCTTGC+AGG 0.382838 5_2:+62641738 None:intergenic
TTCTTAATAGGTCATTGAAT+TGG 0.383033 5_2:-62640262 Msa0780620:intron
GTGGCTGCAGTTGCTGTTGA+TGG 0.383976 5_2:+62636437 None:intergenic
TATTTGCTGGGTATTTGTTT+GGG 0.384300 5_2:+62636576 None:intergenic
TTCAATAATCCATCCTCAAC+AGG 0.384532 5_2:+62637411 None:intergenic
TGGGAGGACTTTGAGTTAAG+AGG 0.385773 5_2:-62637672 Msa0780620:CDS
CTTTCTTATCTTCCTTCCTT+CGG 0.390613 5_2:+62635827 None:intergenic
GGACAGGCTCTAGGCCTTTG+TGG 0.391091 5_2:+62637238 None:intergenic
CTGAGCGGATAACTAAAATA+AGG 0.391369 5_2:-62639996 Msa0780620:CDS
ACTTTCCTTTCAGAAGCAAC+TGG 0.392072 5_2:-62639961 Msa0780620:CDS
GGTTGTCTGAAGTTGGATAA+TGG 0.392275 5_2:-62635529 Msa0780620:three_prime_UTR
GACAGGCTCTAGGCCTTTGT+GGG 0.393042 5_2:+62637239 None:intergenic
CAAACGGATTGAAGAGTTAA+GGG 0.394974 5_2:-62640088 Msa0780620:CDS
TGCAAGCTCAAAATCATCTC+AGG 0.396964 5_2:-62640040 Msa0780620:CDS
TTAATGACTGGTACAGCTTC+AGG 0.397123 5_2:+62636979 None:intergenic
GGAGGTCCGAGGTGCCTAGA+AGG 0.402093 5_2:+62636757 None:intergenic
AATATTGTTATTTATTTGCT+GGG 0.403885 5_2:+62636564 None:intergenic
CAGTACTACTTACAGATTGA+TGG 0.406117 5_2:+62636932 None:intergenic
ACAAACGGATTGAAGAGTTA+AGG 0.407007 5_2:-62640089 Msa0780620:CDS
ATGAACTGTGAAGACGATAA+TGG 0.407609 5_2:+62638082 None:intergenic
TGATAACCGGCTTGCCTTGT+GGG 0.412622 5_2:-62637691 Msa0780620:CDS
CTTGAAGAATGTTGGCGAAC+CGG 0.413288 5_2:+62637093 None:intergenic
ACAAAGTATAAGAACCTTAA+CGG 0.413835 5_2:+62635431 None:intergenic
TCATTGCCAGCAGCATGATC+AGG 0.419666 5_2:+62637867 None:intergenic
TTTGTTTGGGTGTAAGTCAT+AGG 0.420005 5_2:+62636589 None:intergenic
ACAACTTCCATCTGCAATGC+AGG 0.423548 5_2:-62636506 Msa0780620:CDS
CAACTGTAATCGTCCATAAT+GGG 0.424052 5_2:+62636664 None:intergenic
GTCTTGGATTCTTGGAGAAT+GGG 0.424377 5_2:-62637029 Msa0780620:CDS
TGCAAGTAGGATCCTGCAAC+TGG 0.425193 5_2:+62637940 None:intergenic
TGGTGGGGATTCCCACTTTG+AGG 0.425785 5_2:+62639676 None:intergenic
TCACTGCCTGAGCAATTTCA+AGG 0.428255 5_2:-62636379 Msa0780620:CDS
TTTCCATTTGTGAGTGGTTG+TGG 0.433208 5_2:+62636415 None:intergenic
AATTTCAAGGACAGTCAATC+TGG 0.434375 5_2:-62636366 Msa0780620:CDS
ATATTCCCTCCTGAAGCTGT+TGG 0.434860 5_2:+62637216 None:intergenic
TGCCTAGAAGGACGGCTGAC+TGG 0.436204 5_2:+62636769 None:intergenic
TATATATAAATAATATCTGT+TGG 0.436386 5_2:-62635343 Msa0780620:three_prime_UTR
TTTGTAAGTCTCTTGTACAT+TGG 0.436605 5_2:+62638403 None:intergenic
AAGCTGAGTTGGAGTTTGAA+TGG 0.437626 5_2:+62636186 None:intergenic
GTTGCAGTCAAGGAATCGTC+TGG 0.438590 5_2:-62638518 Msa0780620:CDS
CAGGAACTTGCTACTCCAAA+AGG 0.441080 5_2:-62636118 Msa0780620:intron
GACTGTCCTTGAAATTGCTC+AGG 0.443456 5_2:+62636373 None:intergenic
GCTCGCTACAAAGGTTTGTA+TGG 0.443595 5_2:-62639769 Msa0780620:intron
ACTTTGACGACTCGGAGAAT+CGG 0.444924 5_2:-62639882 Msa0780620:CDS
AAAGAAAAGCGCGGGTCAAA+AGG 0.445478 5_2:-62637572 Msa0780620:CDS
CGGTTCGCCAACATTCTTCA+AGG 0.445732 5_2:-62637092 Msa0780620:CDS
AAGCTGTTGGGACAGGCTCT+AGG 0.447913 5_2:+62637229 None:intergenic
GGTCTTGGATTCTTGGAGAA+TGG 0.447942 5_2:-62637030 Msa0780620:CDS
CCTCCTGAAGCTGTTGGGAC+AGG 0.450135 5_2:+62637222 None:intergenic
TGGAAATTAGGATTAGGGTT+TGG 0.452769 5_2:+62641665 None:intergenic
TATTCCCTCCTGAAGCTGTT+GGG 0.453754 5_2:+62637217 None:intergenic
TAGGGGTTTCAACTCCGTTA+AGG 0.455245 5_2:-62635445 Msa0780620:three_prime_UTR
CTGCGTGAACTTCTGTTGTC+AGG 0.456353 5_2:-62638173 Msa0780620:CDS
ACCATCTGGACCTAAAGCTT+TGG 0.459526 5_2:+62636612 None:intergenic
GGCTTTATCTAACATTGTTA+GGG 0.462027 5_2:-62637532 Msa0780620:CDS
TATCATTGGCAGCTAGTTGA+TGG 0.465356 5_2:+62635618 None:intergenic
CATCCTCTTCTTCCACATGC+TGG 0.467300 5_2:+62637337 None:intergenic
ACGGTATTGAGTTTGCTCTA+TGG 0.467614 5_2:-62640122 Msa0780620:CDS
CCACCACAACCACTCACAAA+TGG 0.467959 5_2:-62636418 Msa0780620:CDS
GGCTGAACAATCCCTAACTT+TGG 0.469271 5_2:+62637369 None:intergenic
TATGGACGATTACAGTTGGT+TGG 0.469520 5_2:-62636659 Msa0780620:CDS
CCTAAAGCTTTGGTTGATGA+AGG 0.469725 5_2:+62636622 None:intergenic
ACATGAGTAGGTATGAAGAA+GGG 0.470702 5_2:-62637719 Msa0780620:CDS
GAATCGTCTGGGCAATTAGC+TGG 0.471615 5_2:-62638506 Msa0780620:CDS
GTGTAAGTCATAGGACCATC+TGG 0.473812 5_2:+62636598 None:intergenic
CAAGTTCCTGCAACAAGTCT+AGG 0.473852 5_2:+62636131 None:intergenic
GGTAGAGGAGGGAATGTCTC+TGG 0.475651 5_2:-62637067 Msa0780620:CDS
GGTTGGGGACGGATAGTAGA+AGG 0.475799 5_2:-62635763 Msa0780620:three_prime_UTR
TTTGGTATTTGTTGAGTGGT+TGG 0.476462 5_2:-62637898 Msa0780620:CDS
GTTGTCTGAAGTTGGATAAT+GGG 0.477280 5_2:-62635528 Msa0780620:three_prime_UTR
AGAAGAAGAGGAAGAAATTG+GGG 0.477360 5_2:+62641596 None:intergenic
CCTGTGTCTGAGCTGATTTA+CGG 0.480936 5_2:+62640229 None:intergenic
AACATGAGTAGGTATGAAGA+AGG 0.481234 5_2:-62637720 Msa0780620:CDS
CATCAATCTGTAAGTAGTAC+TGG 0.481335 5_2:-62636931 Msa0780620:CDS
TTGAACAAGCTACTATCAGT+TGG 0.481721 5_2:-62637786 Msa0780620:CDS
GCAAAGTATGGGCTTCCTCT+TGG 0.481966 5_2:-62639907 Msa0780620:CDS
AGAACATTACATTGTCCAAA+AGG 0.482679 5_2:+62641122 None:intergenic
TGTGCACGCTCCCGCGATGA+AGG 0.483911 5_2:+62641148 None:intergenic
GGCCAGGATACTCTTGAGAA+TGG 0.484628 5_2:-62638128 Msa0780620:CDS
CCCATATAACCAGCAGAAGC+AGG 0.485657 5_2:+62637132 None:intergenic
TTGAAGTGGTTGTCTGAAGT+TGG 0.486708 5_2:-62635536 Msa0780620:three_prime_UTR
ACAATCAAACATTGCTGCAT+AGG 0.488784 5_2:+62635236 None:intergenic
AAGTGGGAATCCCCACCATC+AGG 0.489502 5_2:-62639671 Msa0780620:intron
GTGCTAGCACTACGTATCAT+TGG 0.490389 5_2:+62635604 None:intergenic
CTACTTACAGATTGATGGAT+AGG 0.490680 5_2:+62636937 None:intergenic
GTAGATTCCATGTCTAGCTT+AGG 0.492338 5_2:+62636712 None:intergenic
ACTGTTTCAGATACAATTAG+TGG 0.494600 5_2:-62636691 Msa0780620:CDS
GACCTGTGAGATTGGATTGA+AGG 0.494741 5_2:+62641626 None:intergenic
GACGATTACAGTTGGTTGGA+TGG 0.496386 5_2:-62636655 Msa0780620:CDS
TGCCTCTGCCATACCTGTTG+AGG 0.498130 5_2:-62637424 Msa0780620:CDS
TATCCGTCCCCAACCAGAAA+AGG 0.499685 5_2:+62635771 None:intergenic
TTGAAGGATCGGTGGAGAAT+CGG 0.500405 5_2:+62641642 None:intergenic
AAATCCAAGATCGTTTGTGC+AGG 0.501198 5_2:+62637633 None:intergenic
CCAGGGAAGGGAAAGCAAGC+TGG 0.501532 5_2:+62636532 None:intergenic
GTTGGGTCTATGTCTATTGA+AGG 0.503665 5_2:-62637768 Msa0780620:CDS
GTTCTCTCTCTTATATGCAC+TGG 0.505988 5_2:-62638197 Msa0780620:CDS
AAGAAGGGGAAACTGATAAC+CGG 0.506057 5_2:-62637704 Msa0780620:CDS
TTCTTCAAGGTGGGTAGAGG+AGG 0.507179 5_2:-62637079 Msa0780620:CDS
GGAGCTAGCAACTGTTGGTC+TGG 0.511711 5_2:-62635194 Msa0780620:three_prime_UTR
CCATTATGGACGATTACAGT+TGG 0.512067 5_2:-62636663 Msa0780620:CDS
CGGATTGTGATGGAGAAAGA+TGG 0.513968 5_2:-62639862 Msa0780620:CDS
TGAACAAGCTACTATCAGTT+GGG 0.516399 5_2:-62637785 Msa0780620:CDS
GCTTCAGGCAGTGAGAGCTC+AGG 0.516732 5_2:+62636994 None:intergenic
CAATTAGCTGGCAAAGGAAG+AGG 0.517921 5_2:-62638494 Msa0780620:CDS
AATCTGGACAGGTCGTTACT+TGG 0.518673 5_2:-62636350 Msa0780620:CDS
GTTTATGTTGAAAAGTAGAC+CGG 0.520997 5_2:-62635215 Msa0780620:three_prime_UTR
ATCGTTTGTGCAGGGAGAAG+TGG 0.523439 5_2:+62637642 None:intergenic
TGATGGTTTACATCATTGGA+AGG 0.524355 5_2:+62637165 None:intergenic
ATGGATGATGATAGTAGAGA+TGG 0.524950 5_2:-62641185 Msa0780620:exon
CTTCTTCCACATGCTGGTGG+CGG 0.525030 5_2:+62637343 None:intergenic
GGGGCCTCAATACTTGCAAC+CGG 0.525118 5_2:-62637112 Msa0780620:CDS
GCAACAGTGTCAACTTTGAA+TGG 0.525397 5_2:+62636865 None:intergenic
TATGGCAATTGCATTACAAA+CGG 0.526429 5_2:-62640104 Msa0780620:CDS
TGTCGGTTTAAGAATATTGA+CGG 0.527808 5_2:-62636322 Msa0780620:intron
TTTGATAGTTGCATTTGAGA+AGG 0.528906 5_2:-62639407 Msa0780620:intron
CGAACCGGTTGCAAGTATTG+AGG 0.529772 5_2:+62637108 None:intergenic
AGTTAAAGCTGTTGCAGTCA+AGG 0.529955 5_2:-62638528 Msa0780620:CDS
GTCGTTACTTGGTGTGATGT+CGG 0.532957 5_2:-62636339 Msa0780620:exon
TCTGCCATACCTGTTGAGGA+TGG 0.535879 5_2:-62637420 Msa0780620:CDS
TAATCCATCCTCAACAGGTA+TGG 0.536423 5_2:+62637416 None:intergenic
ACATTCTTCAAGGTGGGTAG+AGG 0.537329 5_2:-62637082 Msa0780620:CDS
TCAACAAATACCAAAATGCC+TGG 0.538876 5_2:+62637906 None:intergenic
TGTTACCCTGATCATGCTGC+TGG 0.539605 5_2:-62637873 Msa0780620:CDS
TGATAGTAGCTTGTTCAAGA+AGG 0.543609 5_2:+62637791 None:intergenic
CTGATAACCGGCTTGCCTTG+TGG 0.543671 5_2:-62637692 Msa0780620:CDS
CAAGGACAGTCAATCTGGAC+AGG 0.547996 5_2:-62636361 Msa0780620:CDS
GGCCAAATATTGGGATCTGA+CGG 0.548233 5_2:+62640204 None:intergenic
TCCTTGTGAGATATTGAACT+AGG 0.549050 5_2:+62635168 None:intergenic
TCACTGACAAGAAGCTGAGT+TGG 0.549364 5_2:+62636175 None:intergenic
TGAAAATCAAAGCAAAGTAT+GGG 0.550442 5_2:-62639918 Msa0780620:CDS
CTACCCACCTTGAAGAATGT+TGG 0.550702 5_2:+62637085 None:intergenic
TGAACAAGATTCCATTTAGA+CGG 0.552233 5_2:+62638360 None:intergenic
CATACGAAGAGAAGAAGAAG+AGG 0.553009 5_2:+62641584 None:intergenic
ACGGACAAAGCGAGTGCAGA+AGG 0.553163 5_2:+62638379 None:intergenic
CTGCTTCTGCTGGTTATATG+GGG 0.553787 5_2:-62637131 Msa0780620:CDS
CCATTTGTGAGTGGTTGTGG+TGG 0.554272 5_2:+62636418 None:intergenic
GAACTTCAGTGAAAGTCTCC+AGG 0.556442 5_2:+62638216 None:intergenic
GCCAAATATTGGGATCTGAC+GGG 0.557035 5_2:+62640205 None:intergenic
AAAATCCAGTTGCTTCTGAA+AGG 0.558731 5_2:+62639956 None:intergenic
TCCAAGACCATCAAAACTGT+TGG 0.559641 5_2:+62637044 None:intergenic
CCAAAGCTTCAAACTAGTTG+GGG 0.560247 5_2:-62635571 Msa0780620:three_prime_UTR
CATGAGTAGGTATGAAGAAG+GGG 0.561375 5_2:-62637718 Msa0780620:CDS
AATGGAAATAATTCTGACAA+TGG 0.561437 5_2:+62638100 None:intergenic
CAACTTCCATCTGCAATGCA+GGG 0.561577 5_2:-62636505 Msa0780620:CDS
TCTTGGTTACTTTGACGACT+CGG 0.562802 5_2:-62639890 Msa0780620:CDS
CCGTAAATCAGCTCAGACAC+AGG 0.563671 5_2:-62640229 Msa0780620:CDS
ATCCTTCAATCCAATCTCAC+AGG 0.564146 5_2:-62641628 Msa0780620:five_prime_UTR
CAGCAGACAAGCCAAAGTTA+GGG 0.565053 5_2:-62637380 Msa0780620:CDS
GCCAGACCGCCACCAGCATG+TGG 0.565394 5_2:-62637349 Msa0780620:CDS
TACAAAGGTTTGTATGGAGA+AGG 0.565799 5_2:-62639763 Msa0780620:intron
GAGAAACATGACTGAAACCA+GGG 0.566825 5_2:+62636734 None:intergenic
GAATCTTGTTCACTCGTACA+AGG 0.568723 5_2:-62638349 Msa0780620:intron
CGTCTATTTGGCCTCAAAGT+GGG 0.569241 5_2:-62639687 Msa0780620:CDS
GACCATTCTCAAGAGTATCC+TGG 0.569271 5_2:+62638126 None:intergenic
TGGTATTGGTGGTATGCCTG+TGG 0.570563 5_2:-62635696 Msa0780620:three_prime_UTR
GTCCGAGGTGCCTAGAAGGA+CGG 0.571859 5_2:+62636761 None:intergenic
AGACCAACAGTTGCTAGCTC+CGG 0.573096 5_2:+62635196 None:intergenic
CCTCTTCTTCCACATGCTGG+TGG 0.573779 5_2:+62637340 None:intergenic
AATGTCTGCTCCTTCATCGC+GGG 0.576364 5_2:-62641158 Msa0780620:CDS
TCGCCAACATTCTTCAAGGT+GGG 0.576967 5_2:-62637088 Msa0780620:CDS
CCCTAGTTCAATATCTCACA+AGG 0.576987 5_2:-62635169 Msa0780620:three_prime_UTR
TCATGCTGCTGGCAATGATG+TGG 0.580521 5_2:-62637862 Msa0780620:CDS
TTATGAAGCAATAATTCTTG+AGG 0.582342 5_2:-62640166 Msa0780620:CDS
AGTCCTCCCACAAGGCAAGC+CGG 0.584137 5_2:+62637685 None:intergenic
CCACCAGCATGTGGAAGAAG+AGG 0.584198 5_2:-62637340 Msa0780620:CDS
TGGCAAAGGAAGAGGAAAAG+TGG 0.584624 5_2:-62638486 Msa0780620:CDS
CCAACTAGTTTGAAGCTTTG+GGG 0.584895 5_2:+62635573 None:intergenic
CTCGGAGAATCGGATTGTGA+TGG 0.585477 5_2:-62639872 Msa0780620:CDS
GGTAAAAGATAACTGCAAGT+AGG 0.589572 5_2:+62637927 None:intergenic
CCTTGTGAGATATTGAACTA+GGG 0.601164 5_2:+62635169 None:intergenic
ACCAAAGCTTTAGGTCCAGA+TGG 0.602194 5_2:-62636613 Msa0780620:CDS
TACTGAGCTCTAAAGACCGA+AGG 0.604067 5_2:-62635843 Msa0780620:three_prime_UTR
AAACTTGTGACAAGGAGTAA+TGG 0.604196 5_2:-62638458 Msa0780620:CDS
GATGGTTTACATCATTGGAA+GGG 0.604597 5_2:+62637166 None:intergenic
GCTTATTGGAAATGTCATAA+CGG 0.605219 5_2:-62635666 Msa0780620:three_prime_UTR
TCATAATTCTCACGCAACTG+TGG 0.608991 5_2:+62640183 None:intergenic
CTGTTTCAGATACAATTAGT+GGG 0.609960 5_2:-62636690 Msa0780620:CDS
TTCGCCAACATTCTTCAAGG+TGG 0.610918 5_2:-62637089 Msa0780620:CDS
GCGTCTATTTGGCCTCAAAG+TGG 0.611432 5_2:-62639688 Msa0780620:CDS
AAGCTTCAAACTAGTTGGGG+AGG 0.613040 5_2:-62635568 Msa0780620:three_prime_UTR
AGACCGGAGCTAGCAACTGT+TGG 0.615992 5_2:-62635199 Msa0780620:three_prime_UTR
GCAAGCTCAAAATCATCTCA+GGG 0.616129 5_2:-62640039 Msa0780620:intron
ACTTCCATCTGCAATGCAGG+GGG 0.617156 5_2:-62636503 Msa0780620:CDS
GGAGGTTGATACGTTTGAAG+TGG 0.617985 5_2:-62635550 Msa0780620:three_prime_UTR
TCTGGGCAATTAGCTGGCAA+AGG 0.617994 5_2:-62638500 Msa0780620:CDS
TCTTCAAGGTGGGTAGAGGA+GGG 0.620783 5_2:-62637078 Msa0780620:CDS
TGTTTCTCCTAAGCTAGACA+TGG 0.621964 5_2:-62636719 Msa0780620:CDS
AAGGATCGGTGGAGAATCGG+TGG 0.622382 5_2:+62641645 None:intergenic
AGAAACATGACTGAAACCAG+GGG 0.623313 5_2:+62636735 None:intergenic
ATCCTCAACAGGTATGGCAG+AGG 0.623892 5_2:+62637422 None:intergenic
AGAGTTATCAGCAATGACTC+CGG 0.624550 5_2:+62636837 None:intergenic
AACTTCCATCTGCAATGCAG+GGG 0.624783 5_2:-62636504 Msa0780620:CDS
GTGAGATTGGATTGAAGGAT+CGG 0.626208 5_2:+62641631 None:intergenic
GAGCTCTAAAGACCGAAGGA+AGG 0.626844 5_2:-62635839 Msa0780620:three_prime_UTR
AGCCGTCCTTCTAGGCACCT+CGG 0.627592 5_2:-62636763 Msa0780620:CDS
CATTGCCAGCAGCATGATCA+GGG 0.628096 5_2:+62637868 None:intergenic
ATAATAAAGTTTCTTGCAGG+CGG 0.629247 5_2:+62641741 None:intergenic
AGCCGAGAAGCGAACAGATG+TGG 0.629504 5_2:-62637283 Msa0780620:CDS
TGCTGATTTCCATTTGTGAG+TGG 0.632353 5_2:+62636409 None:intergenic
AGATTGGATTGAAGGATCGG+TGG 0.632944 5_2:+62641634 None:intergenic
TTGCAGTCAAGGAATCGTCT+GGG 0.635534 5_2:-62638517 Msa0780620:CDS
GGAGAAACATGACTGAAACC+AGG 0.637095 5_2:+62636733 None:intergenic
AATCCAAGATCGTTTGTGCA+GGG 0.638720 5_2:+62637634 None:intergenic
TAACTCAAAGTCCTCCCACA+AGG 0.641757 5_2:+62637677 None:intergenic
CCTGTCCCAACAGCTTCAGG+AGG 0.643055 5_2:-62637222 Msa0780620:CDS
TAACCGGCTTGCCTTGTGGG+AGG 0.643568 5_2:-62637688 Msa0780620:CDS
CCAATAAGCGAACAAACCAC+AGG 0.645656 5_2:+62635680 None:intergenic
TAGGAACTGTAAGTGAGGCA+TGG 0.645754 5_2:+62636956 None:intergenic
ATGGATAGGAACTGTAAGTG+AGG 0.647564 5_2:+62636951 None:intergenic
ACTTTGCTACATGTGTTTAG+GGG 0.647750 5_2:-62635462 Msa0780620:three_prime_UTR
AGTGAGGCATGGTTAATGAC+TGG 0.654276 5_2:+62636967 None:intergenic
GGGATATGCTAATGACGTTG+TGG 0.657259 5_2:-62635508 Msa0780620:three_prime_UTR
AATGTGAATAAGGAATCTGA+AGG 0.659330 5_2:-62638059 Msa0780620:CDS
CTGTCCCAACAGCTTCAGGA+GGG 0.665254 5_2:-62637221 Msa0780620:CDS
TGGAAGCAAAACTTGTGACA+AGG 0.668501 5_2:-62638466 Msa0780620:CDS
GGAAGAAGAGGATGATGACG+AGG 0.669168 5_2:-62637328 Msa0780620:CDS
GAGTCGTCAAAGTAACCAAG+AGG 0.672423 5_2:+62639892 None:intergenic
TGATGTGGATGAGAAACAAG+CGG 0.675405 5_2:-62637847 Msa0780620:CDS
AAGGTTCTGCACGACCTGAG+CGG 0.692368 5_2:-62640011 Msa0780620:CDS
AAATGTCTGCTCCTTCATCG+CGG 0.692962 5_2:-62641159 Msa0780620:CDS
GAAGAAGAGGAAGAAATTGG+GGG 0.697786 5_2:+62641597 None:intergenic
TCGTCAGGGGAATCCCACAA+AGG 0.706959 5_2:-62637252 Msa0780620:CDS
ACAAAATCGTCTGAGATACG+AGG 0.713173 5_2:+62637450 None:intergenic
CTTCCATCTGCAATGCAGGG+GGG 0.722483 5_2:-62636502 Msa0780620:CDS
CTGACAACAGAAGTTCACGC+AGG 0.728234 5_2:+62638174 None:intergenic
GAAACATGACTGAAACCAGG+GGG 0.762711 5_2:+62636736 None:intergenic
ATAGATACATCATATCCACA+AGG 0.766519 5_2:+62635291 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATAAAATAAAATTATATTC+AGG + chr5_2:62635370-62635389 None:intergenic 10.0%
!!! AATTTAATTTACCATTTATT+AGG - chr5_2:62635420-62635439 Msa0780620:three_prime_UTR 10.0%
!!! TTTAACTATTTTTTTTTTGT+TGG - chr5_2:62635613-62635632 Msa0780620:three_prime_UTR 10.0%
!!! TTTTAATTGTTTTTCTTAAT+AGG - chr5_2:62636586-62636605 Msa0780620:CDS 10.0%
!! CCAAAAATTAAAATAAAAAA+AGG + chr5_2:62640606-62640625 None:intergenic 10.0%
!!! CCTTTTTTTATTTTAATTTT+TGG - chr5_2:62640603-62640622 Msa0780620:intron 10.0%
!! TATATATAAATAATATCTGT+TGG - chr5_2:62641517-62641536 Msa0780620:intron 10.0%
!!! TTTTATTTTATGAAATTCCT+AGG - chr5_2:62635378-62635397 Msa0780620:three_prime_UTR 15.0%
!! AAAAAACTAAACCTAATAAA+TGG + chr5_2:62635434-62635453 None:intergenic 15.0%
!!! TTTATTAGGTTTAGTTTTTT+AGG - chr5_2:62635434-62635453 Msa0780620:three_prime_UTR 15.0%
!!! TTATTAGGTTTAGTTTTTTA+GGG - chr5_2:62635435-62635454 Msa0780620:three_prime_UTR 15.0%
!!! CTTTTGAACATAAAAAATTT+AGG + chr5_2:62637509-62637528 None:intergenic 15.0%
!!! ATTTGAATGAATTTTATTAC+TGG - chr5_2:62637832-62637851 Msa0780620:CDS 15.0%
!!! AATTTTATTACTGGAAATAA+TGG - chr5_2:62637841-62637860 Msa0780620:CDS 15.0%
!! AAATTTATAGTTCAAGAATT+AGG - chr5_2:62637893-62637912 Msa0780620:CDS 15.0%
!!! AATATTGTTATTTATTTGCT+GGG + chr5_2:62640299-62640318 None:intergenic 15.0%
!!! AAATATTGTTATTTATTTGC+TGG + chr5_2:62640300-62640319 None:intergenic 15.0%
!!! ATAAATAACAATATTTTGAG+TGG - chr5_2:62640304-62640323 Msa0780620:intron 15.0%
!!! TAAATAACAATATTTTGAGT+GGG - chr5_2:62640305-62640324 Msa0780620:intron 15.0%
!! GAAAATCAAAGAACAAAATA+AGG + chr5_2:62635311-62635330 None:intergenic 20.0%
!! ATATTCAGGAAAAAATTGAA+AGG + chr5_2:62635356-62635375 None:intergenic 20.0%
!!! ATTGATGATTTTAGTTATCA+CGG - chr5_2:62635499-62635518 Msa0780620:three_prime_UTR 20.0%
!!! TCTTTTAAACTACTAAACTA+CGG - chr5_2:62635956-62635975 Msa0780620:intron 20.0%
!!! TTTAGGAAAAAAGCATTTTA+CGG + chr5_2:62635985-62636004 None:intergenic 20.0%
!!! ATCACACTTAATTGATTTTT+AGG + chr5_2:62636002-62636021 None:intergenic 20.0%
!!! GATGTAGTATATTACTATTT+TGG - chr5_2:62637272-62637291 Msa0780620:CDS 20.0%
!!! CAACTATTTATCGATATTTT+CGG - chr5_2:62637389-62637408 Msa0780620:CDS 20.0%
!! AGGTTGTTTATAATAGATAT+AGG + chr5_2:62637964-62637983 None:intergenic 20.0%
!!! AAAATATTGTTTCTTTGGTA+TGG - chr5_2:62638116-62638135 Msa0780620:CDS 20.0%
!! GGTATTGTAAAAAGATTATT+AGG + chr5_2:62638273-62638292 None:intergenic 20.0%
!!! ATTCCAAAATTTTGATCTAA+TGG + chr5_2:62639039-62639058 None:intergenic 20.0%
!! AATTATAAATTTCTTTCCCT+TGG + chr5_2:62639381-62639400 None:intergenic 20.0%
!! AAGGGAAAGAAATTTATAAT+TGG - chr5_2:62639380-62639399 Msa0780620:intron 20.0%
!! AATTACTAACAGTTATGTAT+TGG - chr5_2:62640626-62640645 Msa0780620:intron 20.0%
!! ATTCATAAGAAAATTATGCT+CGG + chr5_2:62640985-62641004 None:intergenic 20.0%
!! GGTAAAATTTCTTACATTAA+AGG + chr5_2:62641224-62641243 None:intergenic 20.0%
!!! TTTCTTTTTTATTTCAAGTC+AGG - chr5_2:62641479-62641498 Msa0780620:intron 20.0%
!!! TTCTTTTTTATTTCAAGTCA+GGG - chr5_2:62641480-62641499 Msa0780620:intron 20.0%
! GTTATATTGAATGTGATGAT+TGG - chr5_2:62635521-62635540 Msa0780620:three_prime_UTR 25.0%
! GTCAATGAATGTTTGATTAA+TGG - chr5_2:62635656-62635675 Msa0780620:three_prime_UTR 25.0%
! ATTGTTGTGATCATCAAATT+AGG - chr5_2:62635798-62635817 Msa0780620:three_prime_UTR 25.0%
! TTGTTGTGATCATCAAATTA+GGG - chr5_2:62635799-62635818 Msa0780620:three_prime_UTR 25.0%
! TTAGAATGGAATGAGTTTAT+TGG - chr5_2:62635885-62635904 Msa0780620:intron 25.0%
!! TTGGTTCATTTTCTTCTTTT+AGG - chr5_2:62635904-62635923 Msa0780620:intron 25.0%
!! TGGTTCATTTTCTTCTTTTA+GGG - chr5_2:62635905-62635924 Msa0780620:intron 25.0%
! AGAGTTATCTTCCAATTAAA+GGG + chr5_2:62636131-62636150 None:intergenic 25.0%
! TAGAGTTATCTTCCAATTAA+AGG + chr5_2:62636132-62636151 None:intergenic 25.0%
!! TTTTCTTATTCTTCCTCTAA+CGG - chr5_2:62636246-62636265 Msa0780620:intron 25.0%
!! CCAAAATATACAACAGTTTT+CGG + chr5_2:62636346-62636365 None:intergenic 25.0%
!!! TGTTGTATATTTTGGTGTTT+TGG - chr5_2:62636351-62636370 Msa0780620:CDS 25.0%
! TTCTTAATAGGTCATTGAAT+TGG - chr5_2:62636598-62636617 Msa0780620:CDS 25.0%
! TTATGAAGCAATAATTCTTG+AGG - chr5_2:62636694-62636713 Msa0780620:CDS 25.0%
!! TGATTTTCATGATAAGATCA+TGG + chr5_2:62636931-62636950 None:intergenic 25.0%
! ATGAAAATCAAAGCAAAGTA+TGG - chr5_2:62636941-62636960 Msa0780620:CDS 25.0%
! TGAAAATCAAAGCAAAGTAT+GGG - chr5_2:62636942-62636961 Msa0780620:CDS 25.0%
!!! GCATTTGTTGTGATTTATTT+TGG - chr5_2:62637226-62637245 Msa0780620:CDS 25.0%
! ATAAATCTATCAATTTCAGC+TGG - chr5_2:62637333-62637352 Msa0780620:CDS 25.0%
! CAACAAATAAAAAACAGAAC+AGG + chr5_2:62637557-62637576 None:intergenic 25.0%
!! TGTTCAACTTTGATATTTTC+CGG - chr5_2:62637575-62637594 Msa0780620:CDS 25.0%
! CTTGAACTATAAATTTATCC+TGG + chr5_2:62637889-62637908 None:intergenic 25.0%
! TTATAGTTCAAGAATTAGGA+AGG - chr5_2:62637897-62637916 Msa0780620:CDS 25.0%
! TATAGTTCAAGAATTAGGAA+GGG - chr5_2:62637898-62637917 Msa0780620:CDS 25.0%
! AATGGAAATAATTCTGACAA+TGG + chr5_2:62638763-62638782 None:intergenic 25.0%
!!! AATGATATATTTTGACTCCA+AGG - chr5_2:62639361-62639380 Msa0780620:intron 25.0%
!!! ATGATATATTTTGACTCCAA+GGG - chr5_2:62639362-62639381 Msa0780620:intron 25.0%
!! ACTGGTACTAATTCATTTTA+TGG - chr5_2:62639947-62639966 Msa0780620:CDS 25.0%
! CGTCAGTATTAAGAATAATT+TGG + chr5_2:62640774-62640793 None:intergenic 25.0%
! TTCATAAGAAAATTATGCTC+GGG + chr5_2:62640984-62641003 None:intergenic 25.0%
! ACAAAGTATAAGAACCTTAA+CGG + chr5_2:62641432-62641451 None:intergenic 25.0%
! AATAATATCTGTTGGATTGT+TGG - chr5_2:62641525-62641544 Msa0780620:intron 25.0%
!!! GATGTGAATATTTTGTTTGT+AGG - chr5_2:62641735-62641754 Msa0780620:five_prime_UTR 25.0%
ATAATAAAGTTTCTTGCAGG+CGG + chr5_2:62635122-62635141 None:intergenic 30.0%
AAGAAGAAGAGGAAGAAATT+GGG + chr5_2:62635268-62635287 None:intergenic 30.0%
! TGTATTTTGTGTAACGAGAA+GGG - chr5_2:62635544-62635563 Msa0780620:three_prime_UTR 30.0%
AGAACATTACATTGTCCAAA+AGG + chr5_2:62635741-62635760 None:intergenic 30.0%
!!! TTGCTCTCATTTTGATTCAT+TGG - chr5_2:62635762-62635781 Msa0780620:three_prime_UTR 30.0%
TGTTGTGATCATCAAATTAG+GGG - chr5_2:62635800-62635819 Msa0780620:three_prime_UTR 30.0%
! TTTGTTGTGGATTGTTAGAA+TGG - chr5_2:62635871-62635890 Msa0780620:intron 30.0%
!!! TTCTTCTTTTAGGGTATGTT+CGG - chr5_2:62635914-62635933 Msa0780620:intron 30.0%
CTTTGTAGATTGTGATTTAG+AGG - chr5_2:62636200-62636219 Msa0780620:three_prime_UTR 30.0%
! AGGAACAGGTTTTTATTGAT+TGG - chr5_2:62636220-62636239 Msa0780620:intron 30.0%
TTTCTTATTCTTCCTCTAAC+GGG - chr5_2:62636247-62636266 Msa0780620:intron 30.0%
TTTCGGCAACAATACAATAA+AGG + chr5_2:62636329-62636348 None:intergenic 30.0%
! CCGAAAACTGTTGTATATTT+TGG - chr5_2:62636343-62636362 Msa0780620:exon 30.0%
!!! TTTTGGTGTTTTGGTTACTT+CGG - chr5_2:62636360-62636379 Msa0780620:CDS 30.0%
AGCAGAAAACAAGAAGTTAT+AGG + chr5_2:62636473-62636492 None:intergenic 30.0%
!!! TAACTTCTTGTTTTCTGCTT+TGG - chr5_2:62636474-62636493 Msa0780620:CDS 30.0%
TATGGCAATTGCATTACAAA+CGG - chr5_2:62636756-62636775 Msa0780620:CDS 30.0%
TCATCGTTGTTTGATATACT+TGG - chr5_2:62637060-62637079 Msa0780620:CDS 30.0%
CATCGTTGTTTGATATACTT+GGG - chr5_2:62637061-62637080 Msa0780620:CDS 30.0%
TTATCTCTAGCAGTTGTAAA+TGG + chr5_2:62637433-62637452 None:intergenic 30.0%
! TTTGATAGTTGCATTTGAGA+AGG - chr5_2:62637453-62637472 Msa0780620:CDS 30.0%
TAGTTGTATATCAGTTTGCA+AGG + chr5_2:62637604-62637623 None:intergenic 30.0%
TTCAAAGCTAAATGAGTTAG+AGG - chr5_2:62637666-62637685 Msa0780620:CDS 30.0%
!! TGCTATATTAACTTGTAAGC+CGG + chr5_2:62637714-62637733 None:intergenic 30.0%
! GGCGAAAAATATTGTTTCTT+TGG - chr5_2:62638111-62638130 Msa0780620:CDS 30.0%
AAATAGACGATCAAAGTCAA+GGG + chr5_2:62638166-62638185 None:intergenic 30.0%
!! TAACTTTGTCGATTCTATCA+TGG + chr5_2:62638294-62638313 None:intergenic 30.0%
TTTGTAAGTCTCTTGTACAT+TGG + chr5_2:62638460-62638479 None:intergenic 30.0%
TGAACAAGATTCCATTTAGA+CGG + chr5_2:62638503-62638522 None:intergenic 30.0%
! TTTTATGCATTACACCATTG+AGG - chr5_2:62638564-62638583 Msa0780620:intron 30.0%
!!! TTTTTTTCATGATGATAGCC+TGG - chr5_2:62638626-62638645 Msa0780620:intron 30.0%
! CAAAATTCAGCTTTTCATCT+TGG + chr5_2:62638713-62638732 None:intergenic 30.0%
! CAAGATGAAAAGCTGAATTT+TGG - chr5_2:62638711-62638730 Msa0780620:intron 30.0%
CACAGTTCATAATGTGAATA+AGG - chr5_2:62638791-62638810 Msa0780620:intron 30.0%
AATGTGAATAAGGAATCTGA+AGG - chr5_2:62638801-62638820 Msa0780620:intron 30.0%
! TTATCTTTTACCAGGCATTT+TGG - chr5_2:62638944-62638963 Msa0780620:intron 30.0%
!!! CTTGTTTTAGTAACATGAGT+AGG - chr5_2:62639129-62639148 Msa0780620:intron 30.0%
! AAACGATCTTGGATTTTTCA+AGG - chr5_2:62639234-62639253 Msa0780620:intron 30.0%
! AGGCTTTATCTAACATTGTT+AGG - chr5_2:62639327-62639346 Msa0780620:intron 30.0%
! GGCTTTATCTAACATTGTTA+GGG - chr5_2:62639328-62639347 Msa0780620:intron 30.0%
! TGTTTGATGGTTTACATCAT+TGG + chr5_2:62639702-62639721 None:intergenic 30.0%
ACTGTTTCAGATACAATTAG+TGG - chr5_2:62640169-62640188 Msa0780620:CDS 30.0%
CTGTTTCAGATACAATTAGT+GGG - chr5_2:62640170-62640189 Msa0780620:CDS 30.0%
! TATTTGCTGGGTATTTGTTT+GGG + chr5_2:62640287-62640306 None:intergenic 30.0%
! TTATTTGCTGGGTATTTGTT+TGG + chr5_2:62640288-62640307 None:intergenic 30.0%
!! TGTCGGTTTAAGAATATTGA+CGG - chr5_2:62640538-62640557 Msa0780620:intron 30.0%
!! TGGATTTGTTGCTGTTTATT+TGG - chr5_2:62640574-62640593 Msa0780620:intron 30.0%
!! ATTTGTTGCTGTTTATTTGG+TGG - chr5_2:62640577-62640596 Msa0780620:intron 30.0%
TACTAACAGTTATGTATTGG+TGG - chr5_2:62640629-62640648 Msa0780620:intron 30.0%
GACTGTTATTGGAGTTTATT+TGG - chr5_2:62640706-62640725 Msa0780620:intron 30.0%
! ATAATTTGGTACCAACCTTT+TGG + chr5_2:62640760-62640779 None:intergenic 30.0%
!!! GTATGTTTTGACATCAATGA+TGG + chr5_2:62640825-62640844 None:intergenic 30.0%
TTTGAAAGTTCAGTGAAAGT+CGG + chr5_2:62640847-62640866 None:intergenic 30.0%
! AGAAGATTATCCAGTTTTCT+TGG - chr5_2:62641128-62641147 Msa0780620:intron 30.0%
! GAAGATTATCCAGTTTTCTT+GGG - chr5_2:62641129-62641148 Msa0780620:intron 30.0%
! AAGATTATCCAGTTTTCTTG+GGG - chr5_2:62641130-62641149 Msa0780620:intron 30.0%
GCTTATTGGAAATGTCATAA+CGG - chr5_2:62641194-62641213 Msa0780620:exon 30.0%
TACTTTGCTACATGTGTTTA+GGG - chr5_2:62641397-62641416 Msa0780620:intron 30.0%
ATAGATACATCATATCCACA+AGG + chr5_2:62641572-62641591 None:intergenic 30.0%
GTTTATGTTGAAAAGTAGAC+CGG - chr5_2:62641645-62641664 Msa0780620:five_prime_UTR 30.0%
TTGAAAGCCCAGTCTAAAAA+CGG - chr5_2:62635080-62635099 Msa0780620:three_prime_UTR 35.0%
GGGATAATAAAGTTTCTTGC+AGG + chr5_2:62635125-62635144 None:intergenic 35.0%
TGGAAATTAGGATTAGGGTT+TGG + chr5_2:62635198-62635217 None:intergenic 35.0%
ATCGGTGGAAATTAGGATTA+GGG + chr5_2:62635203-62635222 None:intergenic 35.0%
AATCGGTGGAAATTAGGATT+AGG + chr5_2:62635204-62635223 None:intergenic 35.0%
AGAAGAAGAGGAAGAAATTG+GGG + chr5_2:62635267-62635286 None:intergenic 35.0%
GAAGAAGAAGAGGAAGAAAT+TGG + chr5_2:62635269-62635288 None:intergenic 35.0%
! GTGTATTTTGTGTAACGAGA+AGG - chr5_2:62635543-62635562 Msa0780620:three_prime_UTR 35.0%
!!! TTTTTTTGTTGGTTTTGCGC+AGG - chr5_2:62635624-62635643 Msa0780620:three_prime_UTR 35.0%
ATGGATGATGATAGTAGAGA+TGG - chr5_2:62635675-62635694 Msa0780620:three_prime_UTR 35.0%
GATCACAACAATTACAACGT+AGG + chr5_2:62635790-62635809 None:intergenic 35.0%
!!! ATATGCTCTGGTTTTTGTTG+TGG - chr5_2:62635858-62635877 Msa0780620:intron 35.0%
TCCAATTAAAGGGTCTGTTT+GGG + chr5_2:62636121-62636140 None:intergenic 35.0%
TTCCAATTAAAGGGTCTGTT+TGG + chr5_2:62636122-62636141 None:intergenic 35.0%
TGCATGTACAAAGTTCACTT+TGG - chr5_2:62636161-62636180 Msa0780620:three_prime_UTR 35.0%
TCACAATCTACAAAGCTACA+TGG + chr5_2:62636195-62636214 None:intergenic 35.0%
AGATTGTGATTTAGAGGAAC+AGG - chr5_2:62636206-62636225 Msa0780620:intron 35.0%
TTCTTATTCTTCCTCTAACG+GGG - chr5_2:62636248-62636267 Msa0780620:intron 35.0%
!!! ACTGGCTTTTTGGTTTGTTT+TGG - chr5_2:62636277-62636296 Msa0780620:intron 35.0%
ACAATAAAGGAGGGATAACA+AGG + chr5_2:62636316-62636335 None:intergenic 35.0%
GGCAACAATACAATAAAGGA+GGG + chr5_2:62636325-62636344 None:intergenic 35.0%
ACAAGAGTTACATGTTCTAC+CGG + chr5_2:62636505-62636524 None:intergenic 35.0%
TTAGAAGAACAAGTAAGCCA+CGG + chr5_2:62636538-62636557 None:intergenic 35.0%
!! ACAAACGGATTGAAGAGTTA+AGG - chr5_2:62636771-62636790 Msa0780620:CDS 35.0%
!! CAAACGGATTGAAGAGTTAA+GGG - chr5_2:62636772-62636791 Msa0780620:CDS 35.0%
!!! CTTATTTTAGTTATCCGCTC+AGG + chr5_2:62636866-62636885 None:intergenic 35.0%
CTGAGCGGATAACTAAAATA+AGG - chr5_2:62636864-62636883 Msa0780620:CDS 35.0%
AAAATCCAGTTGCTTCTGAA+AGG + chr5_2:62636907-62636926 None:intergenic 35.0%
TACAAAGGTTTGTATGGAGA+AGG - chr5_2:62637097-62637116 Msa0780620:CDS 35.0%
ATATACAAGCTGCGTCTATT+TGG - chr5_2:62637161-62637180 Msa0780620:CDS 35.0%
!! GCTTTGTTGGCTTCATATTA+TGG - chr5_2:62637355-62637374 Msa0780620:CDS 35.0%
! TTATCGATATTTTCGGAGTC+TGG - chr5_2:62637396-62637415 Msa0780620:CDS 35.0%
GTGTTTCAGAATCAACTTCA+TGG + chr5_2:62637487-62637506 None:intergenic 35.0%
! GGTTTGTAAGCTGTAAGTTT+TGG - chr5_2:62637687-62637706 Msa0780620:CDS 35.0%
! AACATTTTACAATGCAGACC+AGG - chr5_2:62637868-62637887 Msa0780620:CDS 35.0%
!! AATTAGGAAGGGTACTAACT+GGG - chr5_2:62637909-62637928 Msa0780620:CDS 35.0%
! ACAATATTTTTCGCCTGAGA+TGG + chr5_2:62638106-62638125 None:intergenic 35.0%
CAAATAGACGATCAAAGTCA+AGG + chr5_2:62638167-62638186 None:intergenic 35.0%
! CTATTTGTTGCCTCAATGTA+TGG - chr5_2:62638180-62638199 Msa0780620:CDS 35.0%
AAAGACAACACCATACATTG+AGG + chr5_2:62638193-62638212 None:intergenic 35.0%
!!! TATGGTGTTGTCTTTTTTCC+TGG - chr5_2:62638198-62638217 Msa0780620:CDS 35.0%
!! GTATGATCTTTTTGGCGTTA+TGG - chr5_2:62638238-62638257 Msa0780620:intron 35.0%
AAACTTGTGACAAGGAGTAA+TGG - chr5_2:62638402-62638421 Msa0780620:CDS 35.0%
CAAGCCTGTACTAAAAATGA+AGG - chr5_2:62638429-62638448 Msa0780620:CDS 35.0%
!!! TGCTCCTTCATTTTTAGTAC+AGG + chr5_2:62638436-62638455 None:intergenic 35.0%
ATGAACTGTGAAGACGATAA+TGG + chr5_2:62638781-62638800 None:intergenic 35.0%
GGTAAAAGATAACTGCAAGT+AGG + chr5_2:62638936-62638955 None:intergenic 35.0%
! ACTTGCAGTTATCTTTTACC+AGG - chr5_2:62638936-62638955 Msa0780620:intron 35.0%
TCAACAAATACCAAAATGCC+TGG + chr5_2:62638957-62638976 None:intergenic 35.0%
!! GCATTTTGGTATTTGTTGAG+TGG - chr5_2:62638958-62638977 Msa0780620:intron 35.0%
! TTTGGTATTTGTTGAGTGGT+TGG - chr5_2:62638962-62638981 Msa0780620:intron 35.0%
! CGGCCATTAGATCAAAATTT+TGG - chr5_2:62639033-62639052 Msa0780620:intron 35.0%
TTGAACAAGCTACTATCAGT+TGG - chr5_2:62639074-62639093 Msa0780620:intron 35.0%
TGAACAAGCTACTATCAGTT+GGG - chr5_2:62639075-62639094 Msa0780620:intron 35.0%
AACATGAGTAGGTATGAAGA+AGG - chr5_2:62639140-62639159 Msa0780620:intron 35.0%
ACATGAGTAGGTATGAAGAA+GGG - chr5_2:62639141-62639160 Msa0780620:intron 35.0%
! TTTTTCACTATCGCTTCCAA+GGG + chr5_2:62639267-62639286 None:intergenic 35.0%
GTGAAAAAGAAAGAAAAGCG+CGG - chr5_2:62639279-62639298 Msa0780620:intron 35.0%
! TGAAAAAGAAAGAAAAGCGC+GGG - chr5_2:62639280-62639299 Msa0780620:intron 35.0%
TTCAATAATCCATCCTCAAC+AGG + chr5_2:62639452-62639471 None:intergenic 35.0%
!!! ATGTGGTAGTTTTATCGTCA+GGG - chr5_2:62639594-62639613 Msa0780620:intron 35.0%
GATGGTTTACATCATTGGAA+GGG + chr5_2:62639697-62639716 None:intergenic 35.0%
TGATGGTTTACATCATTGGA+AGG + chr5_2:62639698-62639717 None:intergenic 35.0%
AAGCAGGCAAAAATGTTTGA+TGG + chr5_2:62639715-62639734 None:intergenic 35.0%
!! TTTTGATGGTCTTGGATTCT+TGG - chr5_2:62639823-62639842 Msa0780620:intron 35.0%
! CTACTTACAGATTGATGGAT+AGG + chr5_2:62639926-62639945 None:intergenic 35.0%
CAGTACTACTTACAGATTGA+TGG + chr5_2:62639931-62639950 None:intergenic 35.0%
CATCAATCTGTAAGTAGTAC+TGG - chr5_2:62639929-62639948 Msa0780620:CDS 35.0%
AATTAGTGGGAATCCCATTA+TGG - chr5_2:62640183-62640202 Msa0780620:CDS 35.0%
CAACTGTAATCGTCCATAAT+GGG + chr5_2:62640199-62640218 None:intergenic 35.0%
TTTGTTTGGGTGTAAGTCAT+AGG + chr5_2:62640274-62640293 None:intergenic 35.0%
AATTTCAAGGACAGTCAATC+TGG - chr5_2:62640494-62640513 Msa0780620:intron 35.0%
TTGACGGTATGTTTATAGTC+TGG - chr5_2:62640554-62640573 Msa0780620:intron 35.0%
! TATGTATTGGTGGTTCTTGA+AGG - chr5_2:62640639-62640658 Msa0780620:intron 35.0%
TTCTTGTCAGTGACTGTTAT+TGG - chr5_2:62640695-62640714 Msa0780620:intron 35.0%
CTTTCTTATCTTCCTTCCTT+CGG + chr5_2:62641036-62641055 None:intergenic 35.0%
! CGTTAAGTAAATGCCTTTTC+TGG - chr5_2:62641076-62641095 Msa0780620:intron 35.0%
!! AAGTAAATGCCTTTTCTGGT+TGG - chr5_2:62641080-62641099 Msa0780620:intron 35.0%
!!! AGTAAATGCCTTTTCTGGTT+GGG - chr5_2:62641081-62641100 Msa0780620:intron 35.0%
!!! CTTTTTTCTTCTGGTATTGG+TGG - chr5_2:62641153-62641172 Msa0780620:CDS 35.0%
! GTTGTCTGAAGTTGGATAAT+GGG - chr5_2:62641332-62641351 Msa0780620:intron 35.0%
CTACTTTGCTACATGTGTTT+AGG - chr5_2:62641396-62641415 Msa0780620:intron 35.0%
ACTTTGCTACATGTGTTTAG+GGG - chr5_2:62641398-62641417 Msa0780620:intron 35.0%
GTTTGCATGACAAGTGATAT+TGG - chr5_2:62641450-62641469 Msa0780620:intron 35.0%
! ATATGTCTTTTCTGTCCTTG+TGG - chr5_2:62641554-62641573 Msa0780620:intron 35.0%
ACAATCAAACATTGCTGCAT+AGG + chr5_2:62641627-62641646 None:intergenic 35.0%
CCTTGTGAGATATTGAACTA+GGG + chr5_2:62641694-62641713 None:intergenic 35.0%
TCCTTGTGAGATATTGAACT+AGG + chr5_2:62641695-62641714 None:intergenic 35.0%
!!! TGCGTTTTGAGGGTACAAAA+GGG + chr5_2:62635145-62635164 None:intergenic 40.0%
!!! TTGCGTTTTGAGGGTACAAA+AGG + chr5_2:62635146-62635165 None:intergenic 40.0%
! GATAGGTTGTTGCGTTTTGA+GGG + chr5_2:62635155-62635174 None:intergenic 40.0%
! AGATAGGTTGTTGCGTTTTG+AGG + chr5_2:62635156-62635175 None:intergenic 40.0%
AGAGAGAGAAAGAGAGAGAT+AGG + chr5_2:62635172-62635191 None:intergenic 40.0%
GTGAGATTGGATTGAAGGAT+CGG + chr5_2:62635232-62635251 None:intergenic 40.0%
ATCCTTCAATCCAATCTCAC+AGG - chr5_2:62635232-62635251 Msa0780620:three_prime_UTR 40.0%
GGAAAATTGACCTGTGAGAT+TGG + chr5_2:62635245-62635264 None:intergenic 40.0%
GAAGAAGAGGAAGAAATTGG+GGG + chr5_2:62635266-62635285 None:intergenic 40.0%
CATACGAAGAGAAGAAGAAG+AGG + chr5_2:62635279-62635298 None:intergenic 40.0%
ATCAAATTAGGGGTTGCATG+TGG - chr5_2:62635810-62635829 Msa0780620:three_prime_UTR 40.0%
TCAAATTAGGGGTTGCATGT+GGG - chr5_2:62635811-62635830 Msa0780620:three_prime_UTR 40.0%
ACACTTTGCATGATATGCTC+TGG - chr5_2:62635846-62635865 Msa0780620:three_prime_UTR 40.0%
!!! TTCTTTTAGGGTATGTTCGG+AGG - chr5_2:62635917-62635936 Msa0780620:intron 40.0%
!!! TCTTTTAGGGTATGTTCGGA+GGG - chr5_2:62635918-62635937 Msa0780620:intron 40.0%
AATTAAAGGGTCTGTTTGGG+AGG + chr5_2:62636118-62636137 None:intergenic 40.0%
TCCCAAACAGACCCTTTAAT+TGG - chr5_2:62636117-62636136 Msa0780620:intron 40.0%
CGGCAACAATACAATAAAGG+AGG + chr5_2:62636326-62636345 None:intergenic 40.0%
CATACAAGCAAGTGTGAATC+TGG + chr5_2:62636407-62636426 None:intergenic 40.0%
!!! GTTTTCTGCTTTGGAAAACC+CGG - chr5_2:62636483-62636502 Msa0780620:CDS 40.0%
CAAGAGTTACATGTTCTACC+GGG + chr5_2:62636504-62636523 None:intergenic 40.0%
!! CTCTTGTTATTTGTATGCCG+TGG - chr5_2:62636518-62636537 Msa0780620:CDS 40.0%
TCATAATTCTCACGCAACTG+TGG + chr5_2:62636680-62636699 None:intergenic 40.0%
!!! CATGCTTTTTCTGAGAAGCA+CGG - chr5_2:62636719-62636738 Msa0780620:CDS 40.0%
! ACGGTATTGAGTTTGCTCTA+TGG - chr5_2:62636738-62636757 Msa0780620:CDS 40.0%
TGCAAGCTCAAAATCATCTC+AGG - chr5_2:62636820-62636839 Msa0780620:CDS 40.0%
GCAAGCTCAAAATCATCTCA+GGG - chr5_2:62636821-62636840 Msa0780620:CDS 40.0%
ACTTTCCTTTCAGAAGCAAC+TGG - chr5_2:62636899-62636918 Msa0780620:CDS 40.0%
! TCTTGGTTACTTTGACGACT+CGG - chr5_2:62636970-62636989 Msa0780620:CDS 40.0%
!! TCAATTTCAGCTGGCTTTGT+TGG - chr5_2:62637342-62637361 Msa0780620:CDS 40.0%
GTCTCAGCTGTTTGATATGT+TGG - chr5_2:62637528-62637547 Msa0780620:CDS 40.0%
ATATCAGTTTGCAAGGAAGC+CGG + chr5_2:62637597-62637616 None:intergenic 40.0%
!!! GTAAGCTGTAAGTTTTGGAC+CGG - chr5_2:62637692-62637711 Msa0780620:CDS 40.0%
ACATCATTGTCCCTTACACA+CGG + chr5_2:62637798-62637817 None:intergenic 40.0%
!! GAATTAGGAAGGGTACTAAC+TGG - chr5_2:62637908-62637927 Msa0780620:CDS 40.0%
! ATAAACAACCTAGCTGACTC+AGG - chr5_2:62637973-62637992 Msa0780620:CDS 40.0%
GAAAATTCCTCATCCGTAGA+AGG + chr5_2:62638144-62638163 None:intergenic 40.0%
! TCCCTTGCGTATGATCTTTT+TGG - chr5_2:62638230-62638249 Msa0780620:intron 40.0%
GCCAAAAAGATCATACGCAA+GGG + chr5_2:62638234-62638253 None:intergenic 40.0%
CAAAGTTACTCTCAGCTTTC+TGG - chr5_2:62638306-62638325 Msa0780620:intron 40.0%
AGTTAAAGCTGTTGCAGTCA+AGG - chr5_2:62638332-62638351 Msa0780620:intron 40.0%
TGGAAGCAAAACTTGTGACA+AGG - chr5_2:62638394-62638413 Msa0780620:CDS 40.0%
GAATCTTGTTCACTCGTACA+AGG - chr5_2:62638511-62638530 Msa0780620:CDS 40.0%
ATGCATTACACCATTGAGGA+TGG - chr5_2:62638568-62638587 Msa0780620:intron 40.0%
CAGAATGTATCCATCCTCAA+TGG + chr5_2:62638581-62638600 None:intergenic 40.0%
GTTCTCTCTCTTATATGCAC+TGG - chr5_2:62638663-62638682 Msa0780620:intron 40.0%
!! TGAAAAGCTGAATTTTGGCC+AGG - chr5_2:62638716-62638735 Msa0780620:intron 40.0%
TGATGTGGATGAGAAACAAG+CGG - chr5_2:62639013-62639032 Msa0780620:intron 40.0%
GTTGGGTCTATGTCTATTGA+AGG - chr5_2:62639092-62639111 Msa0780620:intron 40.0%
CATGAGTAGGTATGAAGAAG+GGG - chr5_2:62639142-62639161 Msa0780620:intron 40.0%
AAGAAGGGGAAACTGATAAC+CGG - chr5_2:62639156-62639175 Msa0780620:intron 40.0%
AATCCAAGATCGTTTGTGCA+GGG + chr5_2:62639229-62639248 None:intergenic 40.0%
AAATCCAAGATCGTTTGTGC+AGG + chr5_2:62639230-62639249 None:intergenic 40.0%
!!! TTTTCAAGGAAGCATTCCCT+TGG - chr5_2:62639248-62639267 Msa0780620:intron 40.0%
!! CTTTTTCACTATCGCTTCCA+AGG + chr5_2:62639268-62639287 None:intergenic 40.0%
!!! GTCAAAAGGATTTTAGCTGC+AGG - chr5_2:62639302-62639321 Msa0780620:intron 40.0%
!!! AAGGATTTTAGCTGCAGGAA+AGG - chr5_2:62639307-62639326 Msa0780620:intron 40.0%
! ACAAAATCGTCTGAGATACG+AGG + chr5_2:62639413-62639432 None:intergenic 40.0%
TAATCCATCCTCAACAGGTA+TGG + chr5_2:62639447-62639466 None:intergenic 40.0%
!!! GATGTGGTAGTTTTATCGTC+AGG - chr5_2:62639593-62639612 Msa0780620:intron 40.0%
!!! TGTGGTAGTTTTATCGTCAG+GGG - chr5_2:62639595-62639614 Msa0780620:intron 40.0%
TCCAAGACCATCAAAACTGT+TGG + chr5_2:62639819-62639838 None:intergenic 40.0%
GTCTTGGATTCTTGGAGAAT+GGG - chr5_2:62639831-62639850 Msa0780620:intron 40.0%
TTAATGACTGGTACAGCTTC+AGG + chr5_2:62639884-62639903 None:intergenic 40.0%
ATGGATAGGAACTGTAAGTG+AGG + chr5_2:62639912-62639931 None:intergenic 40.0%
GCAACAGTGTCAACTTTGAA+TGG + chr5_2:62639998-62640017 None:intergenic 40.0%
AGAGTTATCAGCAATGACTC+CGG + chr5_2:62640026-62640045 None:intergenic 40.0%
AGAAACATGACTGAAACCAG+GGG + chr5_2:62640128-62640147 None:intergenic 40.0%
GAGAAACATGACTGAAACCA+GGG + chr5_2:62640129-62640148 None:intergenic 40.0%
TGTTTCTCCTAAGCTAGACA+TGG - chr5_2:62640141-62640160 Msa0780620:CDS 40.0%
! GTAGATTCCATGTCTAGCTT+AGG + chr5_2:62640151-62640170 None:intergenic 40.0%
CCAACTGTAATCGTCCATAA+TGG + chr5_2:62640200-62640219 None:intergenic 40.0%
CCATTATGGACGATTACAGT+TGG - chr5_2:62640197-62640216 Msa0780620:CDS 40.0%
TATGGACGATTACAGTTGGT+TGG - chr5_2:62640201-62640220 Msa0780620:CDS 40.0%
!! CCTAAAGCTTTGGTTGATGA+AGG + chr5_2:62640241-62640260 None:intergenic 40.0%
CCTTCATCAACCAAAGCTTT+AGG - chr5_2:62640238-62640257 Msa0780620:CDS 40.0%
!! CAGATGGAAGTTGTTTTCCA+GGG + chr5_2:62640348-62640367 None:intergenic 40.0%
TTTCCATTTGTGAGTGGTTG+TGG + chr5_2:62640448-62640467 None:intergenic 40.0%
!! TGCTGATTTCCATTTGTGAG+TGG + chr5_2:62640454-62640473 None:intergenic 40.0%
! AAGCTGAGTTGGAGTTTGAA+TGG + chr5_2:62640677-62640696 None:intergenic 40.0%
!! AACTTGCTACTCCAAAAGGT+TGG - chr5_2:62640746-62640765 Msa0780620:intron 40.0%
TGTTTGTGTCTGATATGCTG+TGG - chr5_2:62640876-62640895 Msa0780620:intron 40.0%
!!! GTAAATGCCTTTTCTGGTTG+GGG - chr5_2:62641082-62641101 Msa0780620:intron 40.0%
GAAAAAAGCCCCAAGAAAAC+TGG + chr5_2:62641141-62641160 None:intergenic 40.0%
!!! TTCTTGGGGCTTTTTTCTTC+TGG - chr5_2:62641144-62641163 Msa0780620:CDS 40.0%
!!! GGGCTTTTTTCTTCTGGTAT+TGG - chr5_2:62641150-62641169 Msa0780620:CDS 40.0%
TATCATTGGCAGCTAGTTGA+TGG + chr5_2:62641245-62641264 None:intergenic 40.0%
! CCAACTAGTTTGAAGCTTTG+GGG + chr5_2:62641290-62641309 None:intergenic 40.0%
! CCCAACTAGTTTGAAGCTTT+GGG + chr5_2:62641291-62641310 None:intergenic 40.0%
CCCAAAGCTTCAAACTAGTT+GGG - chr5_2:62641288-62641307 Msa0780620:intron 40.0%
CCAAAGCTTCAAACTAGTTG+GGG - chr5_2:62641289-62641308 Msa0780620:intron 40.0%
! TTGAAGTGGTTGTCTGAAGT+TGG - chr5_2:62641324-62641343 Msa0780620:intron 40.0%
! GGTTGTCTGAAGTTGGATAA+TGG - chr5_2:62641331-62641350 Msa0780620:intron 40.0%
CCCTAGTTCAATATCTCACA+AGG - chr5_2:62641691-62641710 Msa0780620:five_prime_UTR 40.0%
!!! AACGACGCCGTTTTTAGACT+GGG + chr5_2:62635090-62635109 None:intergenic 45.0%
GTGGAGAATCGGTGGAAATT+AGG + chr5_2:62635210-62635229 None:intergenic 45.0%
TTGAAGGATCGGTGGAGAAT+CGG + chr5_2:62635221-62635240 None:intergenic 45.0%
AGATTGGATTGAAGGATCGG+TGG + chr5_2:62635229-62635248 None:intergenic 45.0%
GACCTGTGAGATTGGATTGA+AGG + chr5_2:62635237-62635256 None:intergenic 45.0%
CCTACGAAGCTCTTAAACCT+AGG + chr5_2:62635398-62635417 None:intergenic 45.0%
CCTAGGTTTAAGAGCTTCGT+AGG - chr5_2:62635395-62635414 Msa0780620:three_prime_UTR 45.0%
AAATGTCTGCTCCTTCATCG+CGG - chr5_2:62635701-62635720 Msa0780620:three_prime_UTR 45.0%
!!! CTTTTAGGGTATGTTCGGAG+GGG - chr5_2:62635919-62635938 Msa0780620:intron 45.0%
!!! GGGGAAGATAACTGGCTTTT+TGG - chr5_2:62636267-62636286 Msa0780620:intron 45.0%
GTGTGAATCTGGCAGCAAAA+GGG + chr5_2:62636396-62636415 None:intergenic 45.0%
AGTGTGAATCTGGCAGCAAA+AGG + chr5_2:62636397-62636416 None:intergenic 45.0%
! CCTGTGTCTGAGCTGATTTA+CGG + chr5_2:62636634-62636653 None:intergenic 45.0%
TCCCGTCAGATCCCAATATT+TGG - chr5_2:62636654-62636673 Msa0780620:CDS 45.0%
GCCAAATATTGGGATCTGAC+GGG + chr5_2:62636658-62636677 None:intergenic 45.0%
GGCCAAATATTGGGATCTGA+CGG + chr5_2:62636659-62636678 None:intergenic 45.0%
CGCAACTGTGGCCAAATATT+GGG + chr5_2:62636668-62636687 None:intergenic 45.0%
ACGCAACTGTGGCCAAATAT+TGG + chr5_2:62636669-62636688 None:intergenic 45.0%
AGCTCAAAATCATCTCAGGG+TGG - chr5_2:62636824-62636843 Msa0780620:CDS 45.0%
GCTCAAAATCATCTCAGGGT+GGG - chr5_2:62636825-62636844 Msa0780620:CDS 45.0%
AAATCATCTCAGGGTGGGAA+AGG - chr5_2:62636830-62636849 Msa0780620:CDS 45.0%
GAGTCGTCAAAGTAACCAAG+AGG + chr5_2:62636971-62636990 None:intergenic 45.0%
! ACTTTGACGACTCGGAGAAT+CGG - chr5_2:62636978-62636997 Msa0780620:CDS 45.0%
! CGGATTGTGATGGAGAAAGA+TGG - chr5_2:62636998-62637017 Msa0780620:CDS 45.0%
GCTCGCTACAAAGGTTTGTA+TGG - chr5_2:62637091-62637110 Msa0780620:CDS 45.0%
CGTCTATTTGGCCTCAAAGT+GGG - chr5_2:62637173-62637192 Msa0780620:CDS 45.0%
! AATCCCCACCATCAGGTTTT+TGG - chr5_2:62637196-62637215 Msa0780620:CDS 45.0%
AGTGCCAAAAACCTGATGGT+GGG + chr5_2:62637203-62637222 None:intergenic 45.0%
!! CAAGAGTGCCAAAAACCTGA+TGG + chr5_2:62637207-62637226 None:intergenic 45.0%
! ATATTTTCGGAGTCTGGCTG+TGG - chr5_2:62637402-62637421 Msa0780620:CDS 45.0%
AATGTGAGAGACCGTGTGTA+AGG - chr5_2:62637784-62637803 Msa0780620:CDS 45.0%
ATGTGAGAGACCGTGTGTAA+GGG - chr5_2:62637785-62637804 Msa0780620:CDS 45.0%
TCAATACAGCACACCATCTC+AGG - chr5_2:62638090-62638109 Msa0780620:CDS 45.0%
CTTTGGTATGGCTCCTTCTA+CGG - chr5_2:62638128-62638147 Msa0780620:CDS 45.0%
CGCCAAAAAGATCATACGCA+AGG + chr5_2:62638235-62638254 None:intergenic 45.0%
TTGCAGTCAAGGAATCGTCT+GGG - chr5_2:62638343-62638362 Msa0780620:intron 45.0%
CAATTAGCTGGCAAAGGAAG+AGG - chr5_2:62638366-62638385 Msa0780620:CDS 45.0%
TGGCAAAGGAAGAGGAAAAG+TGG - chr5_2:62638374-62638393 Msa0780620:CDS 45.0%
ACTCGCTTTGTCCGTCTAAA+TGG - chr5_2:62638489-62638508 Msa0780620:CDS 45.0%
GAACTTCAGTGAAAGTCTCC+AGG + chr5_2:62638647-62638666 None:intergenic 45.0%
!! GACCATTCTCAAGAGTATCC+TGG + chr5_2:62638737-62638756 None:intergenic 45.0%
TAACTCAAAGTCCTCCCACA+AGG + chr5_2:62639186-62639205 None:intergenic 45.0%
! TGGGAGGACTTTGAGTTAAG+AGG - chr5_2:62639188-62639207 Msa0780620:intron 45.0%
! AAAGAAAAGCGCGGGTCAAA+AGG - chr5_2:62639288-62639307 Msa0780620:intron 45.0%
CAGCAGACAAGCCAAAGTTA+GGG - chr5_2:62639480-62639499 Msa0780620:CDS 45.0%
GGCTGAACAATCCCTAACTT+TGG + chr5_2:62639494-62639513 None:intergenic 45.0%
GTTCGCTTCTCGGCTATTAT+AGG + chr5_2:62639572-62639591 None:intergenic 45.0%
TACCACATCTGTTCGCTTCT+CGG + chr5_2:62639582-62639601 None:intergenic 45.0%
TATTCCCTCCTGAAGCTGTT+GGG + chr5_2:62639646-62639665 None:intergenic 45.0%
ATATTCCCTCCTGAAGCTGT+TGG + chr5_2:62639647-62639666 None:intergenic 45.0%
! ACATTTTTGCCTGCTTCTGC+TGG - chr5_2:62639719-62639738 Msa0780620:CDS 45.0%
! CCTGCTTCTGCTGGTTATAT+GGG - chr5_2:62639728-62639747 Msa0780620:CDS 45.0%
! CTGCTTCTGCTGGTTATATG+GGG - chr5_2:62639729-62639748 Msa0780620:CDS 45.0%
CTTGAAGAATGTTGGCGAAC+CGG + chr5_2:62639770-62639789 None:intergenic 45.0%
TTCGCCAACATTCTTCAAGG+TGG - chr5_2:62639771-62639790 Msa0780620:intron 45.0%
TCGCCAACATTCTTCAAGGT+GGG - chr5_2:62639772-62639791 Msa0780620:intron 45.0%
CTACCCACCTTGAAGAATGT+TGG + chr5_2:62639778-62639797 None:intergenic 45.0%
ACATTCTTCAAGGTGGGTAG+AGG - chr5_2:62639778-62639797 Msa0780620:intron 45.0%
!! TCTCTGGCCAACAGTTTTGA+TGG - chr5_2:62639809-62639828 Msa0780620:intron 45.0%
!! GCCAACAGTTTTGATGGTCT+TGG - chr5_2:62639815-62639834 Msa0780620:intron 45.0%
GGTCTTGGATTCTTGGAGAA+TGG - chr5_2:62639830-62639849 Msa0780620:intron 45.0%
AGTGAGGCATGGTTAATGAC+TGG + chr5_2:62639896-62639915 None:intergenic 45.0%
TAGGAACTGTAAGTGAGGCA+TGG + chr5_2:62639907-62639926 None:intergenic 45.0%
GTTGACACTGTTGCATCTTC+CGG - chr5_2:62640004-62640023 Msa0780620:CDS 45.0%
! TCATCGTCAGTTTTGCAAGC+TGG - chr5_2:62640055-62640074 Msa0780620:CDS 45.0%
GAAACATGACTGAAACCAGG+GGG + chr5_2:62640127-62640146 None:intergenic 45.0%
GGAGAAACATGACTGAAACC+AGG + chr5_2:62640130-62640149 None:intergenic 45.0%
GACGATTACAGTTGGTTGGA+TGG - chr5_2:62640205-62640224 Msa0780620:CDS 45.0%
!! ACCAAAGCTTTAGGTCCAGA+TGG - chr5_2:62640247-62640266 Msa0780620:CDS 45.0%
ACCATCTGGACCTAAAGCTT+TGG + chr5_2:62640251-62640270 None:intergenic 45.0%
GTGTAAGTCATAGGACCATC+TGG + chr5_2:62640265-62640284 None:intergenic 45.0%
!! GGAAGTTGTTTTCCAGGGAA+GGG + chr5_2:62640343-62640362 None:intergenic 45.0%
!! TGGAAGTTGTTTTCCAGGGA+AGG + chr5_2:62640344-62640363 None:intergenic 45.0%
!! GCAGATGGAAGTTGTTTTCC+AGG + chr5_2:62640349-62640368 None:intergenic 45.0%
ACAACTTCCATCTGCAATGC+AGG - chr5_2:62640354-62640373 Msa0780620:intron 45.0%
CAACTTCCATCTGCAATGCA+GGG - chr5_2:62640355-62640374 Msa0780620:intron 45.0%
AACTTCCATCTGCAATGCAG+GGG - chr5_2:62640356-62640375 Msa0780620:intron 45.0%
TCACTGCCTGAGCAATTTCA+AGG - chr5_2:62640481-62640500 Msa0780620:intron 45.0%
GACTGTCCTTGAAATTGCTC+AGG + chr5_2:62640490-62640509 None:intergenic 45.0%
AATCTGGACAGGTCGTTACT+TGG - chr5_2:62640510-62640529 Msa0780620:intron 45.0%
!! GTCGTTACTTGGTGTGATGT+CGG - chr5_2:62640521-62640540 Msa0780620:intron 45.0%
TCACTGACAAGAAGCTGAGT+TGG + chr5_2:62640688-62640707 None:intergenic 45.0%
!! ATTTGGCCTAGACTTGTTGC+AGG - chr5_2:62640723-62640742 Msa0780620:intron 45.0%
CAAGTTCCTGCAACAAGTCT+AGG + chr5_2:62640732-62640751 None:intergenic 45.0%
!! CAGGAACTTGCTACTCCAAA+AGG - chr5_2:62640742-62640761 Msa0780620:intron 45.0%
!! TACTGAGCTCTAAAGACCGA+AGG - chr5_2:62641017-62641036 Msa0780620:intron 45.0%
CCAATAAGCGAACAAACCAC+AGG + chr5_2:62641183-62641202 None:intergenic 45.0%
!! CCTGTGGTTTGTTCGCTTAT+TGG - chr5_2:62641180-62641199 Msa0780620:CDS 45.0%
GTGCTAGCACTACGTATCAT+TGG + chr5_2:62641259-62641278 None:intergenic 45.0%
CCCCAAAGCTTCAAACTAGT+TGG - chr5_2:62641287-62641306 Msa0780620:intron 45.0%
! CCCCAACTAGTTTGAAGCTT+TGG + chr5_2:62641292-62641311 None:intergenic 45.0%
AAGCTTCAAACTAGTTGGGG+AGG - chr5_2:62641292-62641311 Msa0780620:intron 45.0%
!! GGAGGTTGATACGTTTGAAG+TGG - chr5_2:62641310-62641329 Msa0780620:intron 45.0%
GGGATATGCTAATGACGTTG+TGG - chr5_2:62641352-62641371 Msa0780620:intron 45.0%
TAGGGGTTTCAACTCCGTTA+AGG - chr5_2:62641415-62641434 Msa0780620:intron 45.0%
!! AAAAAATAAAAAATAAAGAA+AGG + chr5_2:62638612-62638631 None:intergenic 5.0%
!!! CAACGACGCCGTTTTTAGAC+TGG + chr5_2:62635091-62635110 None:intergenic 50.0%
AATGTCTGCTCCTTCATCGC+GGG - chr5_2:62635702-62635721 Msa0780620:three_prime_UTR 50.0%
AAAGGGTCTGTTTGGGAGGA+GGG + chr5_2:62636114-62636133 None:intergenic 50.0%
TAAAGGGTCTGTTTGGGAGG+AGG + chr5_2:62636115-62636134 None:intergenic 50.0%
CCAGTTATCTTCCCCGTTAG+AGG + chr5_2:62636262-62636281 None:intergenic 50.0%
CCTCTAACGGGGAAGATAAC+TGG - chr5_2:62636259-62636278 Msa0780620:intron 50.0%
CCGTAAATCAGCTCAGACAC+AGG - chr5_2:62636631-62636650 Msa0780620:CDS 50.0%
GCAAAGTATGGGCTTCCTCT+TGG - chr5_2:62636953-62636972 Msa0780620:CDS 50.0%
CTCGGAGAATCGGATTGTGA+TGG - chr5_2:62636988-62637007 Msa0780620:CDS 50.0%
GGTGATCTTGCTCGCTACAA+AGG - chr5_2:62637082-62637101 Msa0780620:CDS 50.0%
GCGTCTATTTGGCCTCAAAG+TGG - chr5_2:62637172-62637191 Msa0780620:CDS 50.0%
! GTGCCAAAAACCTGATGGTG+GGG + chr5_2:62637202-62637221 None:intergenic 50.0%
GAGTGCCAAAAACCTGATGG+TGG + chr5_2:62637204-62637223 None:intergenic 50.0%
! CTAGCTGACTCAGGATGAGT+CGG - chr5_2:62637982-62638001 Msa0780620:CDS 50.0%
TATGGCTCCTTCTACGGATG+AGG - chr5_2:62638134-62638153 Msa0780620:CDS 50.0%
CGCAAGGGAAAACAATCACC+AGG + chr5_2:62638219-62638238 None:intergenic 50.0%
GTTGCAGTCAAGGAATCGTC+TGG - chr5_2:62638342-62638361 Msa0780620:intron 50.0%
GAATCGTCTGGGCAATTAGC+TGG - chr5_2:62638354-62638373 Msa0780620:CDS 50.0%
TCTGGGCAATTAGCTGGCAA+AGG - chr5_2:62638360-62638379 Msa0780620:CDS 50.0%
CTGACAACAGAAGTTCACGC+AGG + chr5_2:62638689-62638708 None:intergenic 50.0%
CTGCGTGAACTTCTGTTGTC+AGG - chr5_2:62638687-62638706 Msa0780620:intron 50.0%
GGCCAGGATACTCTTGAGAA+TGG - chr5_2:62638732-62638751 Msa0780620:intron 50.0%
AGAGAGATGCATCCAGTTGC+AGG - chr5_2:62638908-62638927 Msa0780620:intron 50.0%
TGCAAGTAGGATCCTGCAAC+TGG + chr5_2:62638923-62638942 None:intergenic 50.0%
TGTTACCCTGATCATGCTGC+TGG - chr5_2:62638987-62639006 Msa0780620:intron 50.0%
CATTGCCAGCAGCATGATCA+GGG + chr5_2:62638995-62639014 None:intergenic 50.0%
TCATTGCCAGCAGCATGATC+AGG + chr5_2:62638996-62639015 None:intergenic 50.0%
TCATGCTGCTGGCAATGATG+TGG - chr5_2:62638998-62639017 Msa0780620:intron 50.0%
!! TGATAACCGGCTTGCCTTGT+GGG - chr5_2:62639169-62639188 Msa0780620:intron 50.0%
ATCGTTTGTGCAGGGAGAAG+TGG + chr5_2:62639221-62639240 None:intergenic 50.0%
TCTCCCTGCACAAACGATCT+TGG - chr5_2:62639223-62639242 Msa0780620:intron 50.0%
ATCCTCAACAGGTATGGCAG+AGG + chr5_2:62639441-62639460 None:intergenic 50.0%
TCTGCCATACCTGTTGAGGA+TGG - chr5_2:62639440-62639459 Msa0780620:CDS 50.0%
GCAGCAGACAAGCCAAAGTT+AGG - chr5_2:62639479-62639498 Msa0780620:CDS 50.0%
CATCCTCTTCTTCCACATGC+TGG + chr5_2:62639526-62639545 None:intergenic 50.0%
! GGAAGAAGAGGATGATGACG+AGG - chr5_2:62639532-62639551 Msa0780620:intron 50.0%
! GCCTGCTTCTGCTGGTTATA+TGG - chr5_2:62639727-62639746 Msa0780620:CDS 50.0%
CCCATATAACCAGCAGAAGC+AGG + chr5_2:62639731-62639750 None:intergenic 50.0%
! CGAACCGGTTGCAAGTATTG+AGG + chr5_2:62639755-62639774 None:intergenic 50.0%
CGGTTCGCCAACATTCTTCA+AGG - chr5_2:62639768-62639787 Msa0780620:intron 50.0%
TTCTTCAAGGTGGGTAGAGG+AGG - chr5_2:62639781-62639800 Msa0780620:intron 50.0%
TCTTCAAGGTGGGTAGAGGA+GGG - chr5_2:62639782-62639801 Msa0780620:intron 50.0%
ACTTCCATCTGCAATGCAGG+GGG - chr5_2:62640357-62640376 Msa0780620:intron 50.0%
CCATTTGTGAGTGGTTGTGG+TGG + chr5_2:62640445-62640464 None:intergenic 50.0%
CCACCACAACCACTCACAAA+TGG - chr5_2:62640442-62640461 Msa0780620:intron 50.0%
CAAGGACAGTCAATCTGGAC+AGG - chr5_2:62640499-62640518 Msa0780620:intron 50.0%
TGACAGCAGCAATCGCAACA+CGG + chr5_2:62640916-62640935 None:intergenic 50.0%
!! GAGCTCTAAAGACCGAAGGA+AGG - chr5_2:62641021-62641040 Msa0780620:intron 50.0%
!!! ATGCCTTTTCTGGTTGGGGA+CGG - chr5_2:62641086-62641105 Msa0780620:intron 50.0%
TATCCGTCCCCAACCAGAAA+AGG + chr5_2:62641092-62641111 None:intergenic 50.0%
!! TGGTATTGGTGGTATGCCTG+TGG - chr5_2:62641164-62641183 Msa0780620:CDS 50.0%
AGACCAACAGTTGCTAGCTC+CGG + chr5_2:62641667-62641686 None:intergenic 50.0%
AAGGATCGGTGGAGAATCGG+TGG + chr5_2:62635218-62635237 None:intergenic 55.0%
TAGGGGTTGCATGTGGGAAG+TGG - chr5_2:62635817-62635836 Msa0780620:three_prime_UTR 55.0%
AGGGGTTGCATGTGGGAAGT+GGG - chr5_2:62635818-62635837 Msa0780620:three_prime_UTR 55.0%
TTAGGGTATGTTCGGAGGGG+AGG - chr5_2:62635922-62635941 Msa0780620:intron 55.0%
TAGGGTATGTTCGGAGGGGA+GGG - chr5_2:62635923-62635942 Msa0780620:intron 55.0%
GTTTGGGAGGAGGGTTTGGA+GGG + chr5_2:62636105-62636124 None:intergenic 55.0%
TGTTTGGGAGGAGGGTTTGG+AGG + chr5_2:62636106-62636125 None:intergenic 55.0%
GTCTGTTTGGGAGGAGGGTT+TGG + chr5_2:62636109-62636128 None:intergenic 55.0%
AAGGTTCTGCACGACCTGAG+CGG - chr5_2:62636849-62636868 Msa0780620:CDS 55.0%
TGGTGGGGATTCCCACTTTG+AGG + chr5_2:62637187-62637206 None:intergenic 55.0%
AAGTGGGAATCCCCACCATC+AGG - chr5_2:62637189-62637208 Msa0780620:CDS 55.0%
CGACTCATCCTGAGTCAGCT+AGG + chr5_2:62637984-62638003 None:intergenic 55.0%
ACGGACAAAGCGAGTGCAGA+AGG + chr5_2:62638484-62638503 None:intergenic 55.0%
!! CTGATAACCGGCTTGCCTTG+TGG - chr5_2:62639168-62639187 Msa0780620:intron 55.0%
TGCCTCTGCCATACCTGTTG+AGG - chr5_2:62639436-62639455 Msa0780620:CDS 55.0%
CTTCTTCCACATGCTGGTGG+CGG + chr5_2:62639520-62639539 None:intergenic 55.0%
CCTCTTCTTCCACATGCTGG+TGG + chr5_2:62639523-62639542 None:intergenic 55.0%
CCACCAGCATGTGGAAGAAG+AGG - chr5_2:62639520-62639539 Msa0780620:intron 55.0%
AGCCGAGAAGCGAACAGATG+TGG - chr5_2:62639577-62639596 Msa0780620:intron 55.0%
TCGTCAGGGGAATCCCACAA+AGG - chr5_2:62639608-62639627 Msa0780620:intron 55.0%
!! GACAGGCTCTAGGCCTTTGT+GGG + chr5_2:62639624-62639643 None:intergenic 55.0%
AAGCTGTTGGGACAGGCTCT+AGG + chr5_2:62639634-62639653 None:intergenic 55.0%
CTGTCCCAACAGCTTCAGGA+GGG - chr5_2:62639639-62639658 Msa0780620:intron 55.0%
GGGGCCTCAATACTTGCAAC+CGG - chr5_2:62639748-62639767 Msa0780620:CDS 55.0%
GGTAGAGGAGGGAATGTCTC+TGG - chr5_2:62639793-62639812 Msa0780620:intron 55.0%
ACATGACTGAAACCAGGGGG+AGG + chr5_2:62640124-62640143 None:intergenic 55.0%
CTTCCATCTGCAATGCAGGG+GGG - chr5_2:62640358-62640377 Msa0780620:intron 55.0%
ATACCCCCCTGCATTGCAGA+TGG + chr5_2:62640364-62640383 None:intergenic 55.0%
! ATGCAGGGGGGTATGCAGAA+TGG - chr5_2:62640370-62640389 Msa0780620:intron 55.0%
! AGGGGGGTATGCAGAATGGT+TGG - chr5_2:62640374-62640393 Msa0780620:intron 55.0%
! GTGGCTGCAGTTGCTGTTGA+TGG + chr5_2:62640426-62640445 None:intergenic 55.0%
ACAGCAGCAATCGCAACACG+GGG + chr5_2:62640914-62640933 None:intergenic 55.0%
GACAGCAGCAATCGCAACAC+GGG + chr5_2:62640915-62640934 None:intergenic 55.0%
GGTTGGGGACGGATAGTAGA+AGG - chr5_2:62641097-62641116 Msa0780620:intron 55.0%
AGACCGGAGCTAGCAACTGT+TGG - chr5_2:62641661-62641680 Msa0780620:five_prime_UTR 55.0%
GGAGCTAGCAACTGTTGGTC+TGG - chr5_2:62641666-62641685 Msa0780620:five_prime_UTR 55.0%
! GGAGCGTGCACAACGCCTTT+TGG - chr5_2:62635723-62635742 Msa0780620:three_prime_UTR 60.0%
!! TAACCGGCTTGCCTTGTGGG+AGG - chr5_2:62639172-62639191 Msa0780620:intron 60.0%
AGTCCTCCCACAAGGCAAGC+CGG + chr5_2:62639178-62639197 None:intergenic 60.0%
!! GGACAGGCTCTAGGCCTTTG+TGG + chr5_2:62639625-62639644 None:intergenic 60.0%
GAGCCTGTCCCAACAGCTTC+AGG - chr5_2:62639635-62639654 Msa0780620:intron 60.0%
CCTCCTGAAGCTGTTGGGAC+AGG + chr5_2:62639641-62639660 None:intergenic 60.0%
CCTGTCCCAACAGCTTCAGG+AGG - chr5_2:62639638-62639657 Msa0780620:intron 60.0%
GCTTCAGGCAGTGAGAGCTC+AGG + chr5_2:62639869-62639888 None:intergenic 60.0%
CTCCAGTCAGCCGTCCTTCT+AGG - chr5_2:62640089-62640108 Msa0780620:CDS 60.0%
TGCCTAGAAGGACGGCTGAC+TGG + chr5_2:62640094-62640113 None:intergenic 60.0%
AGCCGTCCTTCTAGGCACCT+CGG - chr5_2:62640097-62640116 Msa0780620:CDS 60.0%
! GTCCGAGGTGCCTAGAAGGA+CGG + chr5_2:62640102-62640121 None:intergenic 60.0%
CCAGGGAAGGGAAAGCAAGC+TGG + chr5_2:62640331-62640350 None:intergenic 60.0%
! CCAGCTTGCTTTCCCTTCCC+TGG - chr5_2:62640328-62640347 Msa0780620:intron 60.0%
CAGCAGCAATCGCAACACGG+GGG + chr5_2:62640913-62640932 None:intergenic 60.0%
TGTGCACGCTCCCGCGATGA+AGG + chr5_2:62635715-62635734 None:intergenic 65.0%
!! TCCACATGCTGGTGGCGGTC+TGG + chr5_2:62639515-62639534 None:intergenic 65.0%
! GGAGGTCCGAGGTGCCTAGA+AGG + chr5_2:62640106-62640125 None:intergenic 65.0%
TGAAACCAGGGGGAGGTCCG+AGG + chr5_2:62640117-62640136 None:intergenic 65.0%
GCCAGACCGCCACCAGCATG+TGG - chr5_2:62639511-62639530 Msa0780620:CDS 70.0%
AGGCACCTCGGACCTCCCCC+TGG - chr5_2:62640109-62640128 Msa0780620:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 62635074 62641808 62635074 ID=Msa0780620;Name=Msa0780620
chr5_2 mRNA 62635074 62641808 62635074 ID=Msa0780620-mRNA-1;Parent=Msa0780620;Name=Msa0780620-mRNA-1;_AED=0.05;_eAED=0.05;_QI=253|0.77|0.7|1|0.44|0.2|10|921|952
chr5_2 exon 62635074 62635869 62635074 ID=Msa0780620-mRNA-1:exon:18511;Parent=Msa0780620-mRNA-1
chr5_2 exon 62636119 62636221 62636119 ID=Msa0780620-mRNA-1:exon:18510;Parent=Msa0780620-mRNA-1
chr5_2 exon 62636323 62638238 62636323 ID=Msa0780620-mRNA-1:exon:18509;Parent=Msa0780620-mRNA-1
chr5_2 exon 62638350 62638582 62638350 ID=Msa0780620-mRNA-1:exon:18508;Parent=Msa0780620-mRNA-1
chr5_2 exon 62639408 62639530 62639408 ID=Msa0780620-mRNA-1:exon:18507;Parent=Msa0780620-mRNA-1
chr5_2 exon 62639672 62639778 62639672 ID=Msa0780620-mRNA-1:exon:18506;Parent=Msa0780620-mRNA-1
chr5_2 exon 62639836 62640030 62639836 ID=Msa0780620-mRNA-1:exon:18505;Parent=Msa0780620-mRNA-1
chr5_2 exon 62640040 62640274 62640040 ID=Msa0780620-mRNA-1:exon:18504;Parent=Msa0780620-mRNA-1
chr5_2 exon 62641132 62641236 62641132 ID=Msa0780620-mRNA-1:exon:18503;Parent=Msa0780620-mRNA-1
chr5_2 exon 62641589 62641808 62641589 ID=Msa0780620-mRNA-1:exon:18502;Parent=Msa0780620-mRNA-1
chr5_2 five_prime_UTR 62641589 62641808 62641589 ID=Msa0780620-mRNA-1:five_prime_utr;Parent=Msa0780620-mRNA-1
chr5_2 five_prime_UTR 62641204 62641236 62641204 ID=Msa0780620-mRNA-1:five_prime_utr;Parent=Msa0780620-mRNA-1
chr5_2 CDS 62641132 62641203 62641132 ID=Msa0780620-mRNA-1:cds;Parent=Msa0780620-mRNA-1
chr5_2 CDS 62640040 62640274 62640040 ID=Msa0780620-mRNA-1:cds;Parent=Msa0780620-mRNA-1
chr5_2 CDS 62639836 62640030 62639836 ID=Msa0780620-mRNA-1:cds;Parent=Msa0780620-mRNA-1
chr5_2 CDS 62639672 62639778 62639672 ID=Msa0780620-mRNA-1:cds;Parent=Msa0780620-mRNA-1
chr5_2 CDS 62639408 62639530 62639408 ID=Msa0780620-mRNA-1:cds;Parent=Msa0780620-mRNA-1
chr5_2 CDS 62638350 62638582 62638350 ID=Msa0780620-mRNA-1:cds;Parent=Msa0780620-mRNA-1
chr5_2 CDS 62636345 62638238 62636345 ID=Msa0780620-mRNA-1:cds;Parent=Msa0780620-mRNA-1
chr5_2 three_prime_UTR 62636323 62636344 62636323 ID=Msa0780620-mRNA-1:three_prime_utr;Parent=Msa0780620-mRNA-1
chr5_2 three_prime_UTR 62636119 62636221 62636119 ID=Msa0780620-mRNA-1:three_prime_utr;Parent=Msa0780620-mRNA-1
chr5_2 three_prime_UTR 62635074 62635869 62635074 ID=Msa0780620-mRNA-1:three_prime_utr;Parent=Msa0780620-mRNA-1
Gene Sequence

>Msa0780620

ATGATGATAGTAGAGATGGATAAAATGTCTGCTCCTTCATCGCGGGAGCGTGCACAACGCCTTTTGGACAATGTCATTGAATTGGAGAAAAAGCGCCGTAAATCAGCTCAGACACAGGTCCCGTCAGATCCCAATATTTGGCCACAGTTGCGTGAGAATTATGAAGCAATAATTCTTGAGGATCATGCTTTTTCTGAGAAGCACGGTATTGAGTTTGCTCTATGGCAATTGCATTACAAACGGATTGAAGAGTTAAGGGCATATTTCACTGCTGCTCTTACTTCTGCAAGCTCAAAATCATCTCAGGGTTCTGCACGACCTGAGCGGATAACTAAAATAAGGCTGCAGTTGAAGACTTTCCTTTCAGAAGCAACTGGATTTTACCATGATCTTATCATGAAAATCAAAGCAAAGTATGGGCTTCCTCTTGGTTACTTTGACGACTCGGAGAATCGGATTGTGATGGAGAAAGATGGAAAGAAATCAGCTGAGATGAAGAAAAGTTTGTATGGAGAAGGTGACTCAAAAAAGCGTGAGTTTACAGCAGCTTCTAGTTACTATATACAAGCTGCGTCTATTTGGCCTCAAAGTGGGAATCCCCACCATCAGCTGGCTTTGTTGGCTTCATATTATGGTGATGAGCTTGCAACTATTTATCGATATTTTCGGAGTCTGGCTGTGGATAGTCCATTTACAACTGCTAGAGATAATTTGATAGTTGCATTTGAGAAGAATCGACAAAGTTACTCTCAGCTTTCTGGTGAAGTTAAAGCTGTTGCAGTCAAGGAATCGTCTGGGCAATTAGCTGGCAAAGGAAGAGGAAAAGTGGAAGCAAAACTTGTGACAAGGAGTAATGGTGTGCAAGCCTGTACTAAAAATGAAGGAGCATCCAATGTACAAGAGACTTACAAATCCTTCTGCACTCGCTTTGTCCGTCTAAATGGAATCTTGTTCACTCGTACAAGCCTGGAGACTTTCACTGAAGTTCTCTCTCTTATATGCACTGGCCTGCGTGAACTTCTGTTGTCAGGCCAAGATGAAAAGCTGAATTTTGGCCAGGATACTCTTGAGAATGGTCTTGCCATTGTCAGAATTATTTCCATTATCGTCTTCACAGTTCATAATGTGAATAAGGAATCTGAAGGTCAAACTTATGCAGAAATTGTACAGCGTGCTGTTCTACTTCAGAATGCATTCACTGCAGCTTTCGAACTGATGAGTATTATAATAGAGAGATGCATCCAGTTGCAGGATCCTACTTGCAGTTATCTTTTACCAGGCATTTTGGTATTTGTTGAGTGGTTGGCATGTTACCCTGATCATGCTGCTGGCAATGATGTGGATGAGAAACAAGCGGCCATTAGATCAAAATTTTGGAATCATTGTATTTCCTTCTTGAACAAGCTACTATCAGTTGGGTCTATGTCTATTGAAGGTGATGAAGAAGATACTTGTTTTAGTAACATGAGTAGGTATGAAGAAGGGGAAACTGATAACCGGCTTGCCTTGTGGGAGGACTTTGAGTTAAGAGGATTTGTTCCACTTCTCCCTGCACAAACGATCTTGGATTTTTCAAGGAAGCATTCCCTTGGAAGCGATAGTGAAAAAGAAAGAAAAGCGCGGGTCAAAAGGATTTTAGCTGCAGGAAAGGCTTTATCTAACATTGTTAGGGTTGATCAGAAAATGATATATTTTGACTCCAAGGGAAAGAAATTTATAATTGGTGTTGAGCCTCGTATCTCAGACGATTTTGTTCTTGCCTCTGCCATACCTGTTGAGGATGGATTATTGAAAGAAAATGCAGCAGACAAGCCAAAGTTAGGGATTGTTCAGCCAGACCGCCACCAGCATGTGGAAGAAGAGGATGATGACGAGGTTATTGTTTTCAAACCTATAATAGCCGAGAAGCGAACAGATGTGGTAGTTTTATCGTCAGGGGAATCCCACAAAGGCCTAGAGCCTGTCCCAACAGCTTCAGGAGGGAATATAAAATTTAACGTCAATTCTGCTTTTAACCCTTCCAATGATGTAAACCATCAAACATTTTTGCCTGCTTCTGCTGGTTATATGGGGCCTCAATACTTGCAACCGGTTCGCCAACATTCTTCAAGGTGGGTAGAGGAGGGAATGTCTCTGGCCAACAGTTTTGATGGTCTTGGATTCTTGGAGAATGGGCATGTAGTAAAACCTGAGCTCTCACTGCCTGAAGCTGTACCAGTCATTAACCATGCCTCACTTACAGTTCCTATCCATCAATCTGTAAGTAGTACTGGTACTAATTCATTTTATGGTCTCTCAAAAGCTGAAGACTTTATACCATTCAAAGTTGACACTGTTGCATCTTCCGGAGTCATTGCTGATAACTCTTATGTGAAGTCATCGTCAGTTTTGCAAGCTGGTTTGAAAAAATCTCCAGTCAGCCGTCCTTCTAGGCACCTCGGACCTCCCCCTGGTTTCAGTCATGTTTCTCCTAAGCTAGACATGGAATCTACTGTTTCAGATACAATTAGTGGGAATCCCATTATGGACGATTACAGTTGGTTGGATGGATATCAGTTGCCTTCATCAACCAAAGCTTTAGGTCCAGATGGTCCTATGACTTACACCCAAACAAATACCCAGCAAATAAATAACAATATTTTGAGTGGGCCAGCTTGCTTTCCCTTCCCTGGAAAACAACTTCCATCTGCAATGCAGGGGGGTATGCAGAATGGTTGGCATACTTCTGAGCTATTAAAAGCACACCATCAACAGCAACTGCAGCCACCACAACCACTCACAAATGGAAATCAGCATTTTACTTCACTGCCTGAGCAATTTCAAGGACAGTCAATCTGGACAGGTCGTTACTTGGTGTGA
Protein sequence

>Msa0780620

MMIVEMDKMSAPSSRERAQRLLDNVIELEKKRRKSAQTQVPSDPNIWPQLRENYEAIILEDHAFSEKHGIEFALWQLHYKRIEELRAYFTAALTSASSKSSQGSARPERITKIRLQLKTFLSEATGFYHDLIMKIKAKYGLPLGYFDDSENRIVMEKDGKKSAEMKKSLYGEGDSKKREFTAASSYYIQAASIWPQSGNPHHQLALLASYYGDELATIYRYFRSLAVDSPFTTARDNLIVAFEKNRQSYSQLSGEVKAVAVKESSGQLAGKGRGKVEAKLVTRSNGVQACTKNEGASNVQETYKSFCTRFVRLNGILFTRTSLETFTEVLSLICTGLRELLLSGQDEKLNFGQDTLENGLAIVRIISIIVFTVHNVNKESEGQTYAEIVQRAVLLQNAFTAAFELMSIIIERCIQLQDPTCSYLLPGILVFVEWLACYPDHAAGNDVDEKQAAIRSKFWNHCISFLNKLLSVGSMSIEGDEEDTCFSNMSRYEEGETDNRLALWEDFELRGFVPLLPAQTILDFSRKHSLGSDSEKERKARVKRILAAGKALSNIVRVDQKMIYFDSKGKKFIIGVEPRISDDFVLASAIPVEDGLLKENAADKPKLGIVQPDRHQHVEEEDDDEVIVFKPIIAEKRTDVVVLSSGESHKGLEPVPTASGGNIKFNVNSAFNPSNDVNHQTFLPASAGYMGPQYLQPVRQHSSRWVEEGMSLANSFDGLGFLENGHVVKPELSLPEAVPVINHASLTVPIHQSVSSTGTNSFYGLSKAEDFIPFKVDTVASSGVIADNSYVKSSSVLQAGLKKSPVSRPSRHLGPPPGFSHVSPKLDMESTVSDTISGNPIMDDYSWLDGYQLPSSTKALGPDGPMTYTQTNTQQINNNILSGPACFPFPGKQLPSAMQGGMQNGWHTSELLKAHHQQQLQPPQPLTNGNQHFTSLPEQFQGQSIWTGRYLV*