Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0782060 | AES99846.2 | 59.463 | 745 | 191 | 13 | 1 | 648 | 1 | 731 | 0.0 | 796 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0782060 | G7KHA3 | 59.463 | 745 | 191 | 13 | 1 | 648 | 1 | 731 | 0.0 | 796 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0782060 | Msa0985950 | 0.805718 | 1.165931e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0782060 | MtrunA17_Chr5g0439071 | 54.219 | 557 | 158 | 12 | 1 | 475 | 1 | 542 | 0.0 | 530 |
| Msa0782060 | MtrunA17_Chr5g0439061 | 63.807 | 373 | 115 | 7 | 1 | 367 | 1 | 359 | 1.34e-149 | 451 |
| Msa0782060 | MtrunA17_Chr5g0439061 | 66.774 | 310 | 73 | 4 | 369 | 648 | 435 | 744 | 2.74e-126 | 390 |
| Msa0782060 | MtrunA17_Chr2g0286601 | 31.631 | 705 | 362 | 18 | 25 | 640 | 12 | 685 | 1.01e-92 | 301 |
| Msa0782060 | MtrunA17_Chr5g0439081 | 75.141 | 177 | 42 | 1 | 474 | 648 | 41 | 217 | 1.30e-87 | 272 |
| Msa0782060 | MtrunA17_Chr2g0286551 | 32.409 | 685 | 362 | 18 | 25 | 640 | 12 | 664 | 1.03e-85 | 282 |
| Msa0782060 | MtrunA17_Chr3g0102001 | 49.371 | 318 | 126 | 5 | 359 | 643 | 429 | 744 | 7.09e-84 | 279 |
| Msa0782060 | MtrunA17_Chr3g0102001 | 37.270 | 381 | 202 | 9 | 1 | 362 | 1 | 363 | 2.59e-58 | 209 |
| Msa0782060 | MtrunA17_Chr5g0439021 | 69.744 | 195 | 44 | 3 | 1 | 194 | 1 | 181 | 4.13e-83 | 259 |
| Msa0782060 | MtrunA17_Chr3g0098481 | 45.538 | 325 | 143 | 6 | 350 | 641 | 15 | 338 | 5.08e-83 | 265 |
| Msa0782060 | MtrunA17_Chr5g0439051 | 69.492 | 177 | 51 | 2 | 474 | 647 | 45 | 221 | 6.40e-70 | 226 |
| Msa0782060 | MtrunA17_Chr3g0098301 | 42.105 | 323 | 153 | 6 | 350 | 639 | 81 | 402 | 2.23e-69 | 231 |
| Msa0782060 | MtrunA17_Chr3g0098531 | 44.561 | 285 | 125 | 6 | 389 | 641 | 7 | 290 | 8.96e-69 | 226 |
| Msa0782060 | MtrunA17_Chr5g0439041 | 69.421 | 121 | 34 | 1 | 358 | 475 | 48 | 168 | 1.03e-48 | 169 |
| Msa0782060 | MtrunA17_Chr3g0098541 | 36.364 | 319 | 172 | 8 | 56 | 362 | 8 | 307 | 2.78e-48 | 173 |
| Msa0782060 | MtrunA17_Chr2g0284501 | 27.969 | 640 | 363 | 18 | 52 | 627 | 42 | 647 | 1.10e-44 | 169 |
| Msa0782060 | MtrunA17_Chr2g0286561 | 47.953 | 171 | 85 | 2 | 474 | 640 | 40 | 210 | 8.79e-44 | 156 |
| Msa0782060 | MtrunA17_Chr2g0284541 | 28.481 | 632 | 362 | 18 | 52 | 627 | 32 | 629 | 2.20e-43 | 166 |
| Msa0782060 | MtrunA17_Chr5g0439031 | 47.253 | 182 | 83 | 4 | 195 | 367 | 7 | 184 | 2.43e-36 | 136 |
| Msa0782060 | MtrunA17_Chr6g0456101 | 24.121 | 626 | 356 | 20 | 55 | 627 | 172 | 731 | 2.49e-35 | 142 |
| Msa0782060 | MtrunA17_Chr6g0457101 | 22.016 | 645 | 383 | 18 | 28 | 633 | 121 | 684 | 1.38e-34 | 140 |
| Msa0782060 | MtrunA17_Chr3g0098291 | 38.914 | 221 | 114 | 6 | 27 | 244 | 32 | 234 | 3.72e-34 | 130 |
| Msa0782060 | MtrunA17_Chr5g0410341 | 23.774 | 673 | 399 | 22 | 22 | 633 | 123 | 742 | 3.08e-30 | 127 |
| Msa0782060 | MtrunA17_Chr2g0297701 | 29.316 | 307 | 178 | 5 | 372 | 642 | 280 | 583 | 3.61e-29 | 122 |
| Msa0782060 | MtrunA17_Chr3g0098491 | 39.286 | 168 | 84 | 3 | 27 | 194 | 1 | 150 | 9.79e-29 | 112 |
| Msa0782060 | MtrunA17_Chr2g0297481 | 30.357 | 280 | 165 | 6 | 374 | 627 | 189 | 464 | 1.07e-28 | 120 |
| Msa0782060 | MtrunA17_Chr2g0286571 | 30.827 | 266 | 154 | 9 | 25 | 286 | 12 | 251 | 2.83e-27 | 113 |
| Msa0782060 | MtrunA17_Chr2g0297691 | 28.713 | 303 | 181 | 7 | 374 | 644 | 404 | 703 | 2.86e-27 | 117 |
| Msa0782060 | MtrunA17_Chr2g0297491 | 28.621 | 290 | 171 | 6 | 374 | 634 | 91 | 373 | 6.26e-27 | 113 |
| Msa0782060 | MtrunA17_Chr5g0443001 | 29.352 | 293 | 170 | 6 | 374 | 635 | 316 | 602 | 1.38e-26 | 114 |
| Msa0782060 | MtrunA17_Chr2g0297681 | 28.328 | 293 | 175 | 6 | 374 | 635 | 402 | 690 | 1.68e-26 | 115 |
| Msa0782060 | MtrunA17_Chr5g0410171 | 22.999 | 687 | 406 | 23 | 6 | 633 | 108 | 730 | 2.07e-26 | 114 |
| Msa0782060 | MtrunA17_Chr3g0098521 | 36.471 | 170 | 90 | 3 | 27 | 196 | 1 | 152 | 8.21e-25 | 101 |
| Msa0782060 | MtrunA17_Chr2g0297651 | 27.055 | 292 | 177 | 5 | 374 | 638 | 404 | 686 | 1.42e-24 | 108 |
| Msa0782060 | MtrunA17_Chr3g0098511 | 47.368 | 95 | 46 | 2 | 551 | 641 | 1 | 95 | 5.09e-24 | 97.1 |
| Msa0782060 | MtrunA17_Chr5g0410201 | 29.276 | 304 | 180 | 7 | 356 | 627 | 18 | 318 | 1.24e-23 | 102 |
| Msa0782060 | MtrunA17_Chr6g0456141 | 24.918 | 305 | 192 | 6 | 353 | 627 | 77 | 374 | 1.38e-22 | 100 |
| Msa0782060 | MtrunA17_Chr5g0410271 | 28.571 | 315 | 189 | 8 | 356 | 637 | 17 | 328 | 1.57e-22 | 99.4 |
| Msa0782060 | MtrunA17_Chr3g0100301 | 32.317 | 164 | 105 | 3 | 469 | 628 | 242 | 403 | 5.69e-21 | 95.9 |
| Msa0782060 | MtrunA17_Chr5g0410581 | 24.462 | 650 | 366 | 21 | 50 | 624 | 185 | 784 | 1.48e-20 | 96.7 |
| Msa0782060 | MtrunA17_Chr3g0100741 | 26.909 | 275 | 166 | 5 | 374 | 618 | 311 | 580 | 1.93e-20 | 95.5 |
| Msa0782060 | MtrunA17_Chr2g0297711 | 25.965 | 285 | 177 | 6 | 374 | 627 | 238 | 519 | 3.62e-19 | 91.3 |
| Msa0782060 | MtrunA17_Chr5g0410191 | 35.220 | 159 | 98 | 3 | 474 | 628 | 27 | 184 | 1.08e-18 | 84.7 |
| Msa0782060 | MtrunA17_Chr5g0410461 | 25.407 | 307 | 192 | 5 | 372 | 644 | 169 | 472 | 4.27e-18 | 87.8 |
| Msa0782060 | MtrunA17_Chr5g0410371 | 29.084 | 251 | 145 | 4 | 372 | 592 | 2 | 249 | 8.70e-17 | 81.6 |
| Msa0782060 | MtrunA17_Chr3g0096941 | 25.455 | 275 | 170 | 6 | 374 | 618 | 312 | 581 | 1.78e-15 | 80.1 |
| Msa0782060 | MtrunA17_Chr5g0410541 | 33.533 | 167 | 100 | 3 | 474 | 631 | 48 | 212 | 1.31e-11 | 64.7 |
| Msa0782060 | MtrunA17_Chr5g0410181 | 34.848 | 132 | 77 | 4 | 508 | 635 | 2 | 128 | 4.44e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0782060 | AT5G04700.1 | 24.376 | 681 | 385 | 19 | 11 | 637 | 54 | 658 | 3.47e-29 | 123 |
| Msa0782060 | AT3G18670.2 | 28.269 | 283 | 170 | 5 | 374 | 626 | 351 | 630 | 1.51e-25 | 112 |
| Msa0782060 | AT3G18670.1 | 28.269 | 283 | 170 | 5 | 374 | 626 | 296 | 575 | 1.63e-25 | 112 |
| Msa0782060 | AT5G04730.1 | 22.976 | 531 | 308 | 17 | 147 | 637 | 122 | 591 | 1.22e-23 | 106 |
| Msa0782060 | AT5G04690.1 | 30.380 | 237 | 131 | 6 | 433 | 637 | 380 | 614 | 1.70e-22 | 102 |
| Msa0782060 | AT5G04690.3 | 30.380 | 237 | 131 | 6 | 433 | 637 | 400 | 634 | 1.85e-22 | 102 |
| Msa0782060 | AT5G04690.2 | 30.380 | 237 | 131 | 6 | 433 | 637 | 414 | 648 | 1.90e-22 | 102 |
| Msa0782060 | AT5G04680.1 | 23.328 | 583 | 352 | 17 | 109 | 637 | 141 | 682 | 4.22e-20 | 95.5 |
| Msa0782060 | AT5G04680.4 | 22.917 | 576 | 334 | 16 | 109 | 637 | 141 | 653 | 6.88e-20 | 94.7 |
| Msa0782060 | AT5G04680.3 | 23.264 | 576 | 318 | 18 | 109 | 637 | 141 | 639 | 8.69e-20 | 94.4 |
| Msa0782060 | AT5G04680.2 | 23.248 | 585 | 336 | 17 | 109 | 646 | 18 | 536 | 1.03e-19 | 93.6 |
| Msa0782060 | AT5G35810.1 | 27.425 | 299 | 173 | 8 | 360 | 618 | 22 | 316 | 1.54e-19 | 90.9 |
| Msa0782060 | AT3G54065.1 | 33.133 | 166 | 99 | 4 | 474 | 630 | 47 | 209 | 4.51e-17 | 81.6 |
Find 131 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACCATTTGATGGGTCTTC+TGG | 0.210490 | 5_2:-64722252 | None:intergenic |
| CATATGCACACTTGAGAAAT+TGG | 0.215966 | 5_2:-64722341 | None:intergenic |
| ATCCAAATGGATGGTCAATT+TGG | 0.217949 | 5_2:+64719890 | Msa0782060:CDS |
| GCCATTCGAGGAGAATATTT+TGG | 0.229785 | 5_2:+64719954 | Msa0782060:CDS |
| AGAATATGTGAGCGTATTAT+TGG | 0.241586 | 5_2:+64719753 | Msa0782060:CDS |
| GTGGAATATAAAATGGTTTC+AGG | 0.246025 | 5_2:+64724368 | Msa0782060:CDS |
| ATCTTCTTTGCCTAAATCTA+TGG | 0.258519 | 5_2:-64719577 | None:intergenic |
| AGTACACATTGGAAGGTAAA+TGG | 0.267149 | 5_2:+64719463 | Msa0782060:CDS |
| TTGTTGAGACATTGAGATTA+AGG | 0.269764 | 5_2:+64724211 | Msa0782060:CDS |
| GGGTTAATTGCCACTCTATA+TGG | 0.275126 | 5_2:+64721208 | Msa0782060:CDS |
| TGTTTGCCTGTGGCTTTCTA+TGG | 0.281406 | 5_2:+64725080 | Msa0782060:CDS |
| CGCAAAGTGGTGTAATTCTC+TGG | 0.289192 | 5_2:-64721169 | None:intergenic |
| TTACATGTAGCCATAGATTT+AGG | 0.290494 | 5_2:+64719567 | Msa0782060:CDS |
| GCAGGATTGCCTTCTAATAT+TGG | 0.305502 | 5_2:-64724810 | None:intergenic |
| TTCGCCTTTGCTTCTCTTAG+TGG | 0.313718 | 5_2:+64724843 | Msa0782060:CDS |
| ATAGTTAATGTATTGGAAAT+GGG | 0.322883 | 5_2:+64719678 | Msa0782060:CDS |
| AATAGTTAATGTATTGGAAA+TGG | 0.332185 | 5_2:+64719677 | Msa0782060:CDS |
| TGACATTGGCAGGTGGAATA+AGG | 0.333898 | 5_2:+64724001 | Msa0782060:intron |
| AAATGATGTGGAATATAAAA+TGG | 0.339289 | 5_2:+64724361 | Msa0782060:CDS |
| ACAAAACCGACTTGAATCTA+TGG | 0.347068 | 5_2:-64725037 | None:intergenic |
| TTGCGTGATTTCGTTTCTAC+AGG | 0.364058 | 5_2:+64721187 | Msa0782060:CDS |
| TGATCAAATAGTTAATGTAT+TGG | 0.366187 | 5_2:+64719671 | Msa0782060:CDS |
| TTCCAAATTGACCATCCATT+TGG | 0.367641 | 5_2:-64719892 | None:intergenic |
| TTCTAATATTGGTCTACCTT+CGG | 0.374627 | 5_2:-64724799 | None:intergenic |
| ATTGCCACTCTATATGGTTA+TGG | 0.379273 | 5_2:+64721214 | Msa0782060:CDS |
| GGATAATACAATATTGCATT+TGG | 0.385411 | 5_2:+64724284 | Msa0782060:CDS |
| TATAACACTGTTAACTTGAT+CGG | 0.388038 | 5_2:-64719436 | None:intergenic |
| AGCAAGGAGTTTGAGAGGAG+TGG | 0.393571 | 5_2:-64720606 | None:intergenic |
| CATTTGGCATCAAAGGCATT+AGG | 0.395387 | 5_2:+64724300 | Msa0782060:CDS |
| AACCATTTGATGGGTCTTCT+GGG | 0.397585 | 5_2:-64722251 | None:intergenic |
| TGGTGTAATTCTCTGGGAAT+GGG | 0.403290 | 5_2:-64721162 | None:intergenic |
| AAACAAGTGGCTACATAAAT+CGG | 0.410725 | 5_2:-64725062 | None:intergenic |
| CTACCTTCGGTTGTTCCGCC+AGG | 0.413289 | 5_2:-64724786 | None:intergenic |
| GGATTTCAAACGAAGAACTT+TGG | 0.415539 | 5_2:+64724232 | Msa0782060:CDS |
| TTTGAGAAGTGAGAATAGAA+AGG | 0.417267 | 5_2:-64724899 | None:intergenic |
| ATAACACTGTTAACTTGATC+GGG | 0.419776 | 5_2:-64719435 | None:intergenic |
| GTTTCCTCGAGTTAATGTTA+TGG | 0.433090 | 5_2:-64724146 | None:intergenic |
| GAACGACCATAACCATTTGA+TGG | 0.433591 | 5_2:-64722261 | None:intergenic |
| GAAGGTAGACCAATATTAGA+AGG | 0.434859 | 5_2:+64724801 | Msa0782060:CDS |
| GAAGACCCATCAAATGGTTA+TGG | 0.443563 | 5_2:+64722255 | Msa0782060:CDS |
| GAAGATCTTGTACGAGAAGA+TGG | 0.453423 | 5_2:+64719912 | Msa0782060:CDS |
| GAATATGTGAGCGTATTATT+GGG | 0.457903 | 5_2:+64719754 | Msa0782060:CDS |
| AAATTGTCACGGTTATCAAC+TGG | 0.460286 | 5_2:-64725164 | None:intergenic |
| AATATTGCATTTGGCATCAA+AGG | 0.460549 | 5_2:+64724293 | Msa0782060:CDS |
| GTACACATTGGAAGGTAAAT+GGG | 0.461836 | 5_2:+64719464 | Msa0782060:CDS |
| GTGATAATAGCAGATTATTA+CGG | 0.476790 | 5_2:+64720554 | Msa0782060:CDS |
| TCACGGTTATCAACTGGCCT+TGG | 0.480488 | 5_2:-64725158 | None:intergenic |
| TGCTTGTGGCAGTGAAGTAC+AGG | 0.481007 | 5_2:+64724178 | Msa0782060:CDS |
| AGACATGCTTGCGGAACCAC+TGG | 0.494769 | 5_2:+64721075 | Msa0782060:intron |
| GTGGTGTAATTCTCTGGGAA+TGG | 0.495782 | 5_2:-64721163 | None:intergenic |
| CGCGACAAGCACGGCTACAA+CGG | 0.498818 | 5_2:-64724733 | None:intergenic |
| GTTGTAGCCGTGCTTGTCGC+GGG | 0.498874 | 5_2:+64724735 | Msa0782060:CDS |
| ATTCTTCATACCGCCATTCG+AGG | 0.502090 | 5_2:+64719942 | Msa0782060:CDS |
| CCTCGAGTTAATGTTATGGA+TGG | 0.503952 | 5_2:-64724142 | None:intergenic |
| ACTTGAATCTATGGCTAAGC+AGG | 0.505386 | 5_2:-64725028 | None:intergenic |
| TTCTCATATATCCAAATGGA+TGG | 0.507786 | 5_2:+64719881 | Msa0782060:CDS |
| CGTTGTAGCCGTGCTTGTCG+CGG | 0.521883 | 5_2:+64724734 | Msa0782060:CDS |
| GATGTCAGAATTGAGAAAGA+TGG | 0.522016 | 5_2:+64721114 | Msa0782060:CDS |
| GGAATAGCTTGATTCTTGCA+AGG | 0.523501 | 5_2:+64724253 | Msa0782060:CDS |
| GAATAGCTTGATTCTTGCAA+GGG | 0.523709 | 5_2:+64724254 | Msa0782060:CDS |
| TATTGAGCTCGCTGTGGTGA+AGG | 0.525259 | 5_2:-64724763 | None:intergenic |
| ACCAAAATATTCTCCTCGAA+TGG | 0.533702 | 5_2:-64719955 | None:intergenic |
| TTTAGGCAAAGAAGATGTTG+TGG | 0.538138 | 5_2:+64719584 | Msa0782060:CDS |
| TTATAAAAGACAGCAATGAA+TGG | 0.538728 | 5_2:+64724685 | Msa0782060:CDS |
| GTGTAATTCTCTGGGAATGG+GGG | 0.542365 | 5_2:-64721160 | None:intergenic |
| ACTATCAACAATTGTTGTCA+TGG | 0.543458 | 5_2:-64719391 | None:intergenic |
| ATCTCAATGTCTCAACAACA+AGG | 0.545849 | 5_2:-64724206 | None:intergenic |
| GACCCAGAAGACCCATCAAA+TGG | 0.546516 | 5_2:+64722249 | Msa0782060:CDS |
| AAAGTTCAAGCAGCCTTCCA+TGG | 0.550240 | 5_2:+64720648 | Msa0782060:CDS |
| CGTTGTTCATATGTGTGCTA+AGG | 0.555547 | 5_2:-64720577 | None:intergenic |
| TAGTTAATGTATTGGAAATG+GGG | 0.556610 | 5_2:+64719679 | Msa0782060:CDS |
| TGTAGCCACTTGTTTGCCTG+TGG | 0.563130 | 5_2:+64725070 | Msa0782060:CDS |
| TGTGCATATGAACTTACTCA+TGG | 0.563566 | 5_2:+64722354 | Msa0782060:CDS |
| ACCACAGCGAGCTCAATACC+TGG | 0.563860 | 5_2:+64724768 | Msa0782060:CDS |
| GTTAGAAGATAAAAGTACAG+AGG | 0.568086 | 5_2:-64725116 | None:intergenic |
| GGTGTAATTCTCTGGGAATG+GGG | 0.568567 | 5_2:-64721161 | None:intergenic |
| CGATTCGTTTATACCATGGA+AGG | 0.571252 | 5_2:-64720661 | None:intergenic |
| TACATGTAATGCAGTGCCGC+CGG | 0.572437 | 5_2:-64719553 | None:intergenic |
| AAGCACGGCTACAACGGAGC+AGG | 0.572625 | 5_2:-64724727 | None:intergenic |
| GCAATTGTCTCTGATTCAGC+CGG | 0.575013 | 5_2:+64719534 | Msa0782060:CDS |
| GCAAAGTGGTGTAATTCTCT+GGG | 0.576205 | 5_2:-64721168 | None:intergenic |
| GAGGCCACTAAGAGAAGCAA+AGG | 0.576994 | 5_2:-64724847 | None:intergenic |
| AACGACCATAACCATTTGAT+GGG | 0.577567 | 5_2:-64722260 | None:intergenic |
| TTGCATATTGCAGCATCAAG+AGG | 0.578166 | 5_2:+64719723 | Msa0782060:CDS |
| TGTAATTCTCTGGGAATGGG+GGG | 0.578426 | 5_2:-64721159 | None:intergenic |
| ACACTTGAGAAATTGGTGAA+AGG | 0.578655 | 5_2:-64722334 | None:intergenic |
| CTCAATGTCTCAACAACAAG+GGG | 0.580132 | 5_2:-64724204 | None:intergenic |
| TGCGTGATTTCGTTTCTACA+GGG | 0.580382 | 5_2:+64721188 | Msa0782060:CDS |
| AAGGCGAAAACATTGAATGC+AGG | 0.583037 | 5_2:-64724828 | None:intergenic |
| GGAAGCACCCGCGACAAGCA+CGG | 0.583724 | 5_2:-64724742 | None:intergenic |
| ACTGTTGTTTCAGCATCCAG+TGG | 0.584342 | 5_2:-64721091 | None:intergenic |
| TATACGATTCGTTTATACCA+TGG | 0.584683 | 5_2:-64720665 | None:intergenic |
| GGATTAGCAAGGAGTTTGAG+AGG | 0.586418 | 5_2:-64720611 | None:intergenic |
| TGAAGAAGAACAAGAATCAC+AGG | 0.586735 | 5_2:+64724029 | Msa0782060:CDS |
| ATTTGGTGGCAAAATTCCGA+CGG | 0.589174 | 5_2:-64722304 | None:intergenic |
| TTGGAAATGGGGAATGAGCG+TGG | 0.590760 | 5_2:+64719690 | Msa0782060:CDS |
| TTAATGTTATGGATGGCACT+TGG | 0.595618 | 5_2:-64724135 | None:intergenic |
| ATAAGTGAGTACACATTGGA+AGG | 0.599299 | 5_2:+64719456 | Msa0782060:CDS |
| TTTGGTGGCAAAATTCCGAC+GGG | 0.600495 | 5_2:-64722303 | None:intergenic |
| GCAGAACGAAACAAAAGCAA+TGG | 0.603094 | 5_2:-64724991 | None:intergenic |
| GAAACAAAATGTATTGCTTG+TGG | 0.610532 | 5_2:+64724164 | Msa0782060:CDS |
| GCACAACTAGCAATCTGCCC+AGG | 0.615531 | 5_2:-64724333 | None:intergenic |
| TCTCAATGTCTCAACAACAA+GGG | 0.622994 | 5_2:-64724205 | None:intergenic |
| GCTTAGCCATAGATTCAAGT+CGG | 0.624949 | 5_2:+64725031 | Msa0782060:CDS |
| GAAATGCCATAGAAAGCCAC+AGG | 0.626666 | 5_2:-64725086 | None:intergenic |
| GTCAGAATTGAGAAAGATGG+AGG | 0.627002 | 5_2:+64721117 | Msa0782060:CDS |
| TACACATTGGAAGGTAAATG+GGG | 0.628458 | 5_2:+64719465 | Msa0782060:CDS |
| AAAATATTCTCCTCGAATGG+CGG | 0.635505 | 5_2:-64719952 | None:intergenic |
| GATTCTTGCAAGGGATGACG+AGG | 0.637173 | 5_2:+64724263 | Msa0782060:CDS |
| AGAAACGAAATCACGCAAAG+TGG | 0.639936 | 5_2:-64721182 | None:intergenic |
| CTTGATGCTGCAATATGCAA+TGG | 0.640914 | 5_2:-64719720 | None:intergenic |
| GTTTCAGTGGCAAACTCATG+CGG | 0.644655 | 5_2:-64724938 | None:intergenic |
| GCATTAGGTAGTGATAAACC+TGG | 0.647101 | 5_2:+64724315 | Msa0782060:CDS |
| ATTGTCTCTGATTCAGCCGG+CGG | 0.648506 | 5_2:+64719537 | Msa0782060:CDS |
| AGGCTGAAGGCGGATTAGCA+AGG | 0.654615 | 5_2:-64720622 | None:intergenic |
| TGTTATAAGTGAGTACACAT+TGG | 0.656393 | 5_2:+64719452 | Msa0782060:CDS |
| ATACCTGGCGGAACAACCGA+AGG | 0.657148 | 5_2:+64724783 | Msa0782060:CDS |
| GAAAGCCACAGGCAAACAAG+TGG | 0.659503 | 5_2:-64725075 | None:intergenic |
| GTTGTGCATTGCAAATGATG+TGG | 0.660353 | 5_2:+64724349 | Msa0782060:CDS |
| AGATCAGAGAATTATCCCGT+CGG | 0.670646 | 5_2:+64722288 | Msa0782060:CDS |
| GCCAGGTATTGAGCTCGCTG+TGG | 0.673101 | 5_2:-64724769 | None:intergenic |
| TCTTGCCAAAGACATGCTTG+CGG | 0.679236 | 5_2:+64721066 | Msa0782060:intron |
| CATTAGGTAGTGATAAACCT+GGG | 0.682937 | 5_2:+64724316 | Msa0782060:CDS |
| CGTACCATAACCATATAGAG+TGG | 0.682994 | 5_2:-64721218 | None:intergenic |
| AGAAAGGAACATGATGAGTG+CGG | 0.688754 | 5_2:-64724883 | None:intergenic |
| TTATTGGGAGTAATAATCAG+AGG | 0.689049 | 5_2:+64719769 | Msa0782060:CDS |
| GTGCGGTGAAAGAGAAACAG+AGG | 0.689536 | 5_2:-64724866 | None:intergenic |
| ATCACAGGCACGTCTCACGA+AGG | 0.689995 | 5_2:+64724044 | Msa0782060:CDS |
| CCATCCATAACATTAACTCG+AGG | 0.693270 | 5_2:+64724142 | Msa0782060:CDS |
| ACAGCGAGCTCAATACCTGG+CGG | 0.761874 | 5_2:+64724771 | Msa0782060:CDS |
| TAGCACACATATGAACAACG+AGG | 0.835101 | 5_2:+64720580 | Msa0782060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAATACTTATATTTGT+TGG | + | chr5_2:64720701-64720720 | Msa0782060:intron | 10.0% |
| !!! | AAAAATATTTGTTAACATTT+TGG | + | chr5_2:64720906-64720925 | Msa0782060:intron | 10.0% |
| !! | ATTAGGTAAAATATATTTAA+GGG | - | chr5_2:64722102-64722121 | None:intergenic | 10.0% |
| !! | AATTAGGTAAAATATATTTA+AGG | - | chr5_2:64722103-64722122 | None:intergenic | 10.0% |
| !!! | CTTTTATTTATAAGATTTTA+AGG | + | chr5_2:64722865-64722884 | Msa0782060:intron | 10.0% |
| !!! | TATTAACATTCATTATTTTA+GGG | + | chr5_2:64723049-64723068 | Msa0782060:intron | 10.0% |
| !!! | TTTTGGTTTTTTTTTTTTTT+TGG | + | chr5_2:64723823-64723842 | Msa0782060:intron | 10.0% |
| !!! | TTTGGTTTTTTTTTTTTTTT+GGG | + | chr5_2:64723824-64723843 | Msa0782060:intron | 10.0% |
| !!! | TTGATGATGATTAATTTTTT+TGG | + | chr5_2:64720089-64720108 | Msa0782060:intron | 15.0% |
| !!! | AAATGGTAGTTTTTTTTTTT+TGG | + | chr5_2:64720380-64720399 | Msa0782060:intron | 15.0% |
| !!! | AATGGTAGTTTTTTTTTTTT+GGG | + | chr5_2:64720381-64720400 | Msa0782060:intron | 15.0% |
| !! | ATTCATTATATGTTAAAGTA+AGG | + | chr5_2:64720737-64720756 | Msa0782060:intron | 15.0% |
| !! | TTCATTATATGTTAAAGTAA+GGG | + | chr5_2:64720738-64720757 | Msa0782060:intron | 15.0% |
| !! | TTTATAACATGGAAAAAATT+GGG | - | chr5_2:64721413-64721432 | None:intergenic | 15.0% |
| !!! | TCTTATAACTTTTTATAAGA+TGG | + | chr5_2:64721886-64721905 | Msa0782060:intron | 15.0% |
| !!! | CTTATAACTTTTTATAAGAT+GGG | + | chr5_2:64721887-64721906 | Msa0782060:intron | 15.0% |
| !!! | AATTAAAAAGTTGATATATG+TGG | + | chr5_2:64722489-64722508 | Msa0782060:intron | 15.0% |
| !!! | TAAAGTTTAACTTAATTAAG+TGG | - | chr5_2:64722640-64722659 | None:intergenic | 15.0% |
| !!! | CTATTAACATTCATTATTTT+AGG | + | chr5_2:64723048-64723067 | Msa0782060:intron | 15.0% |
| !!! | TTGATGTTATTAGTTTTTAA+AGG | + | chr5_2:64723559-64723578 | Msa0782060:intron | 15.0% |
| !!! | TGATGTTATTAGTTTTTAAA+GGG | + | chr5_2:64723560-64723579 | Msa0782060:intron | 15.0% |
| !!! | AAAAAACCAAAATATTTTCA+TGG | - | chr5_2:64723815-64723834 | None:intergenic | 15.0% |
| !!! | TTGGTTTTTTTTTTTTTTTG+GGG | + | chr5_2:64723825-64723844 | Msa0782060:intron | 15.0% |
| !!! | AATATTACCAAAATATTTTC+AGG | - | chr5_2:64723853-64723872 | None:intergenic | 15.0% |
| !! | AGATACAAAAAAAATATTAC+TGG | + | chr5_2:64723953-64723972 | Msa0782060:intron | 15.0% |
| !! | TAAAAGATCATATATACATA+TGG | - | chr5_2:64724409-64724428 | None:intergenic | 15.0% |
| !! | TGATCAAATAGTTAATGTAT+TGG | + | chr5_2:64719671-64719690 | Msa0782060:CDS | 20.0% |
| !! | AATAGTTAATGTATTGGAAA+TGG | + | chr5_2:64719677-64719696 | Msa0782060:CDS | 20.0% |
| !! | ATAGTTAATGTATTGGAAAT+GGG | + | chr5_2:64719678-64719697 | Msa0782060:CDS | 20.0% |
| !!! | ATTTTTCTCATATATCCAAA+TGG | + | chr5_2:64719877-64719896 | Msa0782060:CDS | 20.0% |
| !!! | GATGATTAATTTTTTTGGTA+TGG | + | chr5_2:64720094-64720113 | Msa0782060:intron | 20.0% |
| !!! | TTTTTTTGGTATGGTATATA+AGG | + | chr5_2:64720103-64720122 | Msa0782060:intron | 20.0% |
| !! | ACTATATGTTAATTCAAGTA+AGG | - | chr5_2:64720130-64720149 | None:intergenic | 20.0% |
| !!! | ACTAGTTTATTACAAATCTT+TGG | + | chr5_2:64720249-64720268 | Msa0782060:intron | 20.0% |
| !! | CTAGTTTATTACAAATCTTT+GGG | + | chr5_2:64720250-64720269 | Msa0782060:intron | 20.0% |
| !!! | TTTTTTTTTTTTGGGAGAAA+AGG | + | chr5_2:64720389-64720408 | Msa0782060:intron | 20.0% |
| !! | TTATAGAGACTAAAAACTTA+TGG | - | chr5_2:64720793-64720812 | None:intergenic | 20.0% |
| !!! | TACAACGACTAAAAATTTTA+CGG | - | chr5_2:64720857-64720876 | None:intergenic | 20.0% |
| !! | TATAAGATTAAAAATGCTGA+TGG | - | chr5_2:64720887-64720906 | None:intergenic | 20.0% |
| !!! | TAATCACTAGAACATTTTTA+GGG | - | chr5_2:64720933-64720952 | None:intergenic | 20.0% |
| !!! | TTAATCACTAGAACATTTTT+AGG | - | chr5_2:64720934-64720953 | None:intergenic | 20.0% |
| !!! | ATTCATGTGCATTATTTTAA+AGG | - | chr5_2:64721026-64721045 | None:intergenic | 20.0% |
| !! | ATTATTAAATGTCTCTTCAA+CGG | + | chr5_2:64721287-64721306 | Msa0782060:intron | 20.0% |
| !! | TTATAACATGGAAAAAATTG+GGG | - | chr5_2:64721412-64721431 | None:intergenic | 20.0% |
| !! | GTTTATAACATGGAAAAAAT+TGG | - | chr5_2:64721414-64721433 | None:intergenic | 20.0% |
| !! | TATAAGCTATGTTTATAACA+TGG | - | chr5_2:64721424-64721443 | None:intergenic | 20.0% |
| !!! | TTGAAGAACATTTTAGAAAA+AGG | + | chr5_2:64721490-64721509 | Msa0782060:intron | 20.0% |
| !! | AAAAAGTTATAAGAGTGAAA+AGG | - | chr5_2:64721880-64721899 | None:intergenic | 20.0% |
| !! | CAAATGAAATATAACGAAAA+TGG | - | chr5_2:64722552-64722571 | None:intergenic | 20.0% |
| !! | AAGAAACATATATAGTGAAA+CGG | - | chr5_2:64722848-64722867 | None:intergenic | 20.0% |
| !! | TCAAAAAGATTATATTTGTC+AGG | - | chr5_2:64723007-64723026 | None:intergenic | 20.0% |
| !!! | TTGTTTTTGGATTTTTAAAG+AGG | - | chr5_2:64723156-64723175 | None:intergenic | 20.0% |
| !!! | TAACCATAAAACTGATTTTA+AGG | + | chr5_2:64723436-64723455 | Msa0782060:intron | 20.0% |
| !!! | TTAATGTGAAATTTGAAATG+AGG | - | chr5_2:64723586-64723605 | None:intergenic | 20.0% |
| !! | AATCTAGTAGTAAAATTGAA+TGG | - | chr5_2:64723689-64723708 | None:intergenic | 20.0% |
| !! | AAATGATGTGGAATATAAAA+TGG | + | chr5_2:64724361-64724380 | Msa0782060:CDS | 20.0% |
| !! | TATAACACTGTTAACTTGAT+CGG | - | chr5_2:64719439-64719458 | None:intergenic | 25.0% |
| ! | TAGTTAATGTATTGGAAATG+GGG | + | chr5_2:64719679-64719698 | Msa0782060:CDS | 25.0% |
| ! | TTGAAGCGTAGAAATAAAAA+TGG | + | chr5_2:64719801-64719820 | Msa0782060:CDS | 25.0% |
| !!! | TTTTTCAAGCTGCTATTAAT+GGG | + | chr5_2:64719835-64719854 | Msa0782060:CDS | 25.0% |
| ! | GTGATAATAGCAGATTATTA+CGG | + | chr5_2:64720554-64720573 | Msa0782060:CDS | 25.0% |
| ! | GTTAAAGTAAGGGTTAATTA+AGG | + | chr5_2:64720748-64720767 | Msa0782060:intron | 25.0% |
| ! | CAGTAAGTTACTAGTAATTA+TGG | - | chr5_2:64721263-64721282 | None:intergenic | 25.0% |
| ! | ATACATCATATCGTAGATAT+TGG | + | chr5_2:64721310-64721329 | Msa0782060:intron | 25.0% |
| !!! | GTATTTTGGTCAATTTGATT+GGG | - | chr5_2:64721725-64721744 | None:intergenic | 25.0% |
| ! | TGAAATATGTCTATTTGACA+AGG | - | chr5_2:64721927-64721946 | None:intergenic | 25.0% |
| !!! | ATTGATCCTTCAAGTTATTT+TGG | - | chr5_2:64722037-64722056 | None:intergenic | 25.0% |
| ! | GTTACAAACATCAAACTTAA+AGG | + | chr5_2:64722059-64722078 | Msa0782060:intron | 25.0% |
| !! | CAACAACGTATAATTTTGTA+AGG | - | chr5_2:64722140-64722159 | None:intergenic | 25.0% |
| ! | AAAATTATACGTTGTTGCAT+TGG | + | chr5_2:64722143-64722162 | Msa0782060:intron | 25.0% |
| ! | AATTGAAATGTCAATGTATG+TGG | - | chr5_2:64722528-64722547 | None:intergenic | 25.0% |
| ! | AGAAACATATATAGTGAAAC+GGG | - | chr5_2:64722847-64722866 | None:intergenic | 25.0% |
| !! | TTTTTGACCGAATGAAAAAA+AGG | + | chr5_2:64723020-64723039 | Msa0782060:intron | 25.0% |
| !!! | AGTACTACCTTTTTTTCATT+CGG | - | chr5_2:64723030-64723049 | None:intergenic | 25.0% |
| !!! | TTGTTGTTTTTTGGTTGAAA+CGG | - | chr5_2:64723210-64723229 | None:intergenic | 25.0% |
| !!! | AATGTGATCTTGTTGTTTTT+TGG | - | chr5_2:64723219-64723238 | None:intergenic | 25.0% |
| !! | ATGCCTTAAAATCAGTTTTA+TGG | - | chr5_2:64723442-64723461 | None:intergenic | 25.0% |
| ! | AATACATTCGCAATATTTGT+TGG | - | chr5_2:64723468-64723487 | None:intergenic | 25.0% |
| !! | TCTCATCCATGAAAATATTT+TGG | + | chr5_2:64723806-64723825 | Msa0782060:intron | 25.0% |
| ! | GGATAATACAATATTGCATT+TGG | + | chr5_2:64724284-64724303 | Msa0782060:CDS | 25.0% |
| !!! | TAATTTTATTTCGATCTCCA+AGG | - | chr5_2:64724461-64724480 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTTCCCACCT+TGG | + | chr5_2:64724552-64724571 | Msa0782060:intron | 25.0% |
| ! | TTATAAAAGACAGCAATGAA+TGG | + | chr5_2:64724685-64724704 | Msa0782060:CDS | 25.0% |
| ! | ATAACACTGTTAACTTGATC+GGG | - | chr5_2:64719438-64719457 | None:intergenic | 30.0% |
| TGTTATAAGTGAGTACACAT+TGG | + | chr5_2:64719452-64719471 | Msa0782060:CDS | 30.0% | |
| TTACATGTAGCCATAGATTT+AGG | + | chr5_2:64719567-64719586 | Msa0782060:CDS | 30.0% | |
| ATCTTCTTTGCCTAAATCTA+TGG | - | chr5_2:64719580-64719599 | None:intergenic | 30.0% | |
| AGAATATGTGAGCGTATTAT+TGG | + | chr5_2:64719753-64719772 | Msa0782060:CDS | 30.0% | |
| GAATATGTGAGCGTATTATT+GGG | + | chr5_2:64719754-64719773 | Msa0782060:CDS | 30.0% | |
| TTATTGGGAGTAATAATCAG+AGG | + | chr5_2:64719769-64719788 | Msa0782060:CDS | 30.0% | |
| TTAATAGCAGCTTGAAAAAG+AGG | - | chr5_2:64719834-64719853 | None:intergenic | 30.0% | |
| !!! | CTTTTTCAAGCTGCTATTAA+TGG | + | chr5_2:64719834-64719853 | Msa0782060:CDS | 30.0% |
| TTCTCATATATCCAAATGGA+TGG | + | chr5_2:64719881-64719900 | Msa0782060:CDS | 30.0% | |
| !! | TTAAAGTGTCTTTTTGACCA+TGG | + | chr5_2:64720343-64720362 | Msa0782060:intron | 30.0% |
| TTTGTTTGTACCAAATACCA+TGG | - | chr5_2:64720363-64720382 | None:intergenic | 30.0% | |
| TGGTATTTGGTACAAACAAA+TGG | + | chr5_2:64720363-64720382 | Msa0782060:intron | 30.0% | |
| ATTGCCTTTATTATGATGTG+TGG | + | chr5_2:64720427-64720446 | Msa0782060:intron | 30.0% | |
| TCATCCACACATCATAATAA+AGG | - | chr5_2:64720434-64720453 | None:intergenic | 30.0% | |
| TGTGGATGATTTGAAAAGTT+AGG | + | chr5_2:64720445-64720464 | Msa0782060:intron | 30.0% | |
| GTGGATGATTTGAAAAGTTA+GGG | + | chr5_2:64720446-64720465 | Msa0782060:intron | 30.0% | |
| ATGATTTGAAAAGTTAGGGA+TGG | + | chr5_2:64720450-64720469 | Msa0782060:intron | 30.0% | |
| TATACGATTCGTTTATACCA+TGG | - | chr5_2:64720668-64720687 | None:intergenic | 30.0% | |
| GTAAGGGTTAATTAAGGAAA+TGG | + | chr5_2:64720754-64720773 | Msa0782060:intron | 30.0% | |
| ACGTTATTACTATCCTCTTT+GGG | - | chr5_2:64721339-64721358 | None:intergenic | 30.0% | |
| TACGTTATTACTATCCTCTT+TGG | - | chr5_2:64721340-64721359 | None:intergenic | 30.0% | |
| !! | ACATTTTAGAAAAAGGAGAG+AGG | + | chr5_2:64721497-64721516 | Msa0782060:intron | 30.0% |
| !!! | GGTATTTTGGTCAATTTGAT+TGG | - | chr5_2:64721726-64721745 | None:intergenic | 30.0% |
| GGAGCACATAAATCAAAATT+AGG | - | chr5_2:64722119-64722138 | None:intergenic | 30.0% | |
| !! | TGAAAGGTTTTGTAATTTGG+TGG | - | chr5_2:64722321-64722340 | None:intergenic | 30.0% |
| !! | TGGTGAAAGGTTTTGTAATT+TGG | - | chr5_2:64722324-64722343 | None:intergenic | 30.0% |
| GGAGTACATATTAAACTCAT+AGG | - | chr5_2:64722443-64722462 | None:intergenic | 30.0% | |
| TTTCATGTTTACTTACCTTC+CGG | + | chr5_2:64722732-64722751 | Msa0782060:intron | 30.0% | |
| CTTTCTTTCTTTCAACTATC+CGG | - | chr5_2:64722791-64722810 | None:intergenic | 30.0% | |
| !!! | TCATTGCACATCTTTGTTTT+TGG | - | chr5_2:64723169-64723188 | None:intergenic | 30.0% |
| AAAACAAAGATGTGCAATGA+AGG | + | chr5_2:64723169-64723188 | Msa0782060:intron | 30.0% | |
| !! | CTCTTTATCTTGTTGTTCTT+TGG | - | chr5_2:64723246-64723265 | None:intergenic | 30.0% |
| AATTAAGCCTCTAGATTTGT+TGG | + | chr5_2:64723604-64723623 | Msa0782060:intron | 30.0% | |
| ! | ATTAAGCCTCTAGATTTGTT+GGG | + | chr5_2:64723605-64723624 | Msa0782060:intron | 30.0% |
| ATTGAATGGTACATAAGTGA+GGG | - | chr5_2:64723675-64723694 | None:intergenic | 30.0% | |
| AATTGAATGGTACATAAGTG+AGG | - | chr5_2:64723676-64723695 | None:intergenic | 30.0% | |
| AATGTCTAATGAAGTTACGT+AGG | - | chr5_2:64723719-64723738 | None:intergenic | 30.0% | |
| !! | AAGCGATGTTCATTTTGAAA+TGG | + | chr5_2:64723922-64723941 | Msa0782060:intron | 30.0% |
| GAAACAAAATGTATTGCTTG+TGG | + | chr5_2:64724164-64724183 | Msa0782060:CDS | 30.0% | |
| TTGTTGAGACATTGAGATTA+AGG | + | chr5_2:64724211-64724230 | Msa0782060:CDS | 30.0% | |
| AATATTGCATTTGGCATCAA+AGG | + | chr5_2:64724293-64724312 | Msa0782060:CDS | 30.0% | |
| GTGGAATATAAAATGGTTTC+AGG | + | chr5_2:64724368-64724387 | Msa0782060:CDS | 30.0% | |
| ! | TTCAAATAATTTTCCCACCT+TGG | + | chr5_2:64724441-64724460 | Msa0782060:intron | 30.0% |
| !!! | TTTTTTGATATACTGCTCCA+AGG | - | chr5_2:64724572-64724591 | None:intergenic | 30.0% |
| ! | ATATATCCTTGTTGCTTGTT+GGG | - | chr5_2:64724622-64724641 | None:intergenic | 30.0% |
| ! | TTCTAATATTGGTCTACCTT+CGG | - | chr5_2:64724802-64724821 | None:intergenic | 30.0% |
| TTTGAGAAGTGAGAATAGAA+AGG | - | chr5_2:64724902-64724921 | None:intergenic | 30.0% | |
| ! | TTGCCACTGAAACTTTTTAT+CGG | + | chr5_2:64724948-64724967 | Msa0782060:CDS | 30.0% |
| AAACAAGTGGCTACATAAAT+CGG | - | chr5_2:64725065-64725084 | None:intergenic | 30.0% | |
| ! | GTTAGAAGATAAAAGTACAG+AGG | - | chr5_2:64725119-64725138 | None:intergenic | 30.0% |
| ATAAGTGAGTACACATTGGA+AGG | + | chr5_2:64719456-64719475 | Msa0782060:CDS | 35.0% | |
| AGTACACATTGGAAGGTAAA+TGG | + | chr5_2:64719463-64719482 | Msa0782060:CDS | 35.0% | |
| GTACACATTGGAAGGTAAAT+GGG | + | chr5_2:64719464-64719483 | Msa0782060:CDS | 35.0% | |
| TACACATTGGAAGGTAAATG+GGG | + | chr5_2:64719465-64719484 | Msa0782060:CDS | 35.0% | |
| !! | ATTGCTTTTCGAGATTGTTC+TGG | - | chr5_2:64719519-64719538 | None:intergenic | 35.0% |
| TTTAGGCAAAGAAGATGTTG+TGG | + | chr5_2:64719584-64719603 | Msa0782060:CDS | 35.0% | |
| ATCCAAATGGATGGTCAATT+TGG | + | chr5_2:64719890-64719909 | Msa0782060:CDS | 35.0% | |
| TTCCAAATTGACCATCCATT+TGG | - | chr5_2:64719895-64719914 | None:intergenic | 35.0% | |
| AAAATATTCTCCTCGAATGG+CGG | - | chr5_2:64719955-64719974 | None:intergenic | 35.0% | |
| ACCAAAATATTCTCCTCGAA+TGG | - | chr5_2:64719958-64719977 | None:intergenic | 35.0% | |
| ! | GTCTTTTTGACCATGGTATT+TGG | + | chr5_2:64720350-64720369 | Msa0782060:intron | 35.0% |
| GATGTCAGAATTGAGAAAGA+TGG | + | chr5_2:64721114-64721133 | Msa0782060:CDS | 35.0% | |
| ATTGCCACTCTATATGGTTA+TGG | + | chr5_2:64721214-64721233 | Msa0782060:CDS | 35.0% | |
| TGGTTATGGTACGTCATATA+TGG | + | chr5_2:64721228-64721247 | Msa0782060:intron | 35.0% | |
| CGTTATTACTATCCTCTTTG+GGG | - | chr5_2:64721338-64721357 | None:intergenic | 35.0% | |
| GAGGATAGTAATAACGTAAG+CGG | + | chr5_2:64721342-64721361 | Msa0782060:intron | 35.0% | |
| AGGATAGTAATAACGTAAGC+GGG | + | chr5_2:64721343-64721362 | Msa0782060:intron | 35.0% | |
| AATTGGGGAAAAAACATGTG+TGG | - | chr5_2:64721397-64721416 | None:intergenic | 35.0% | |
| ! | CTGCTGCACAATAATTTTCT+AGG | + | chr5_2:64721608-64721627 | Msa0782060:intron | 35.0% |
| TGAATTAGAAGAGAAGAGTC+TGG | + | chr5_2:64721637-64721656 | Msa0782060:intron | 35.0% | |
| GAATTAGAAGAGAAGAGTCT+GGG | + | chr5_2:64721638-64721657 | Msa0782060:intron | 35.0% | |
| TTACGTGACTTAAGTCACAT+TGG | + | chr5_2:64721811-64721830 | Msa0782060:intron | 35.0% | |
| TACGTGACTTAAGTCACATT+GGG | + | chr5_2:64721812-64721831 | Msa0782060:intron | 35.0% | |
| GCAAATGACTCAGTTAATCT+GGG | - | chr5_2:64721964-64721983 | None:intergenic | 35.0% | |
| AGCAAATGACTCAGTTAATC+TGG | - | chr5_2:64721965-64721984 | None:intergenic | 35.0% | |
| GTGTGACCAAAATAACTTGA+AGG | + | chr5_2:64722028-64722047 | Msa0782060:intron | 35.0% | |
| AACGACCATAACCATTTGAT+GGG | - | chr5_2:64722263-64722282 | None:intergenic | 35.0% | |
| ACACTTGAGAAATTGGTGAA+AGG | - | chr5_2:64722337-64722356 | None:intergenic | 35.0% | |
| CATATGCACACTTGAGAAAT+TGG | - | chr5_2:64722344-64722363 | None:intergenic | 35.0% | |
| TGTGCATATGAACTTACTCA+TGG | + | chr5_2:64722354-64722373 | Msa0782060:CDS | 35.0% | |
| ! | GAACTTACTCATGGACTTTT+AGG | + | chr5_2:64722363-64722382 | Msa0782060:CDS | 35.0% |
| ATGTCTTCTCCATGATAATC+TGG | + | chr5_2:64722393-64722412 | Msa0782060:intron | 35.0% | |
| TGTCTTCTCCATGATAATCT+GGG | + | chr5_2:64722394-64722413 | Msa0782060:intron | 35.0% | |
| AGTTTAATATGTACTCCCAC+TGG | + | chr5_2:64722446-64722465 | Msa0782060:intron | 35.0% | |
| TCATTTCATTCCATTCCAGT+GGG | - | chr5_2:64722464-64722483 | None:intergenic | 35.0% | |
| TTCATTTCATTCCATTCCAG+TGG | - | chr5_2:64722465-64722484 | None:intergenic | 35.0% | |
| ! | TTTCAACTATCCGGTTTTCA+GGG | - | chr5_2:64722782-64722801 | None:intergenic | 35.0% |
| AGGAGAGATTAGATTCAGTA+TGG | - | chr5_2:64723743-64723762 | None:intergenic | 35.0% | |
| GAAAGAATGTGAATACACAG+AGG | - | chr5_2:64723763-64723782 | None:intergenic | 35.0% | |
| ! | TGGGGAACCTGAAAATATTT+TGG | + | chr5_2:64723843-64723862 | Msa0782060:intron | 35.0% |
| ATGTCAAGTCAAACTATGGA+GGG | - | chr5_2:64723987-64724006 | None:intergenic | 35.0% | |
| AATGTCAAGTCAAACTATGG+AGG | - | chr5_2:64723988-64724007 | None:intergenic | 35.0% | |
| !! | TCCATAGTTTGACTTGACAT+TGG | + | chr5_2:64723987-64724006 | Msa0782060:intron | 35.0% |
| TGAAGAAGAACAAGAATCAC+AGG | + | chr5_2:64724029-64724048 | Msa0782060:CDS | 35.0% | |
| !! | TTTCTAGCTGCAACCAAAAA+TGG | - | chr5_2:64724075-64724094 | None:intergenic | 35.0% |
| !!! | TTTTTGGTTGCAGCTAGAAA+TGG | + | chr5_2:64724075-64724094 | Msa0782060:CDS | 35.0% |
| TTAATGTTATGGATGGCACT+TGG | - | chr5_2:64724138-64724157 | None:intergenic | 35.0% | |
| GTTTCCTCGAGTTAATGTTA+TGG | - | chr5_2:64724149-64724168 | None:intergenic | 35.0% | |
| TCTCAATGTCTCAACAACAA+GGG | - | chr5_2:64724208-64724227 | None:intergenic | 35.0% | |
| ATCTCAATGTCTCAACAACA+AGG | - | chr5_2:64724209-64724228 | None:intergenic | 35.0% | |
| GGATTTCAAACGAAGAACTT+TGG | + | chr5_2:64724232-64724251 | Msa0782060:CDS | 35.0% | |
| GAATAGCTTGATTCTTGCAA+GGG | + | chr5_2:64724254-64724273 | Msa0782060:CDS | 35.0% | |
| CATTAGGTAGTGATAAACCT+GGG | + | chr5_2:64724316-64724335 | Msa0782060:CDS | 35.0% | |
| TTTATTTCGATCTCCAAGGT+GGG | - | chr5_2:64724457-64724476 | None:intergenic | 35.0% | |
| !! | TTTTATTTCGATCTCCAAGG+TGG | - | chr5_2:64724458-64724477 | None:intergenic | 35.0% |
| !! | GGTAAGAAATAGAAGTGTTG+TGG | - | chr5_2:64724601-64724620 | None:intergenic | 35.0% |
| ! | CATATATCCTTGTTGCTTGT+TGG | - | chr5_2:64724623-64724642 | None:intergenic | 35.0% |
| ! | GAAGATTTCTCTTGCTGTAA+TGG | - | chr5_2:64724646-64724665 | None:intergenic | 35.0% |
| TACAGCAAGAGAAATCTTCA+AGG | + | chr5_2:64724647-64724666 | Msa0782060:intron | 35.0% | |
| GAAGGTAGACCAATATTAGA+AGG | + | chr5_2:64724801-64724820 | Msa0782060:CDS | 35.0% | |
| ! | TGCCACTGAAACTTTTTATC+GGG | + | chr5_2:64724949-64724968 | Msa0782060:CDS | 35.0% |
| AACCCGATAAAAAGTTTCAG+TGG | - | chr5_2:64724954-64724973 | None:intergenic | 35.0% | |
| !! | ACAAAACCGACTTGAATCTA+TGG | - | chr5_2:64725040-64725059 | None:intergenic | 35.0% |
| ! | CTATTTTCACTAAGATGCCA+AGG | + | chr5_2:64725141-64725160 | Msa0782060:CDS | 35.0% |
| AAATTGTCACGGTTATCAAC+TGG | - | chr5_2:64725167-64725186 | None:intergenic | 35.0% | |
| CTTGATGCTGCAATATGCAA+TGG | - | chr5_2:64719723-64719742 | None:intergenic | 40.0% | |
| TTGCATATTGCAGCATCAAG+AGG | + | chr5_2:64719723-64719742 | Msa0782060:CDS | 40.0% | |
| GAAGATCTTGTACGAGAAGA+TGG | + | chr5_2:64719912-64719931 | Msa0782060:CDS | 40.0% | |
| ! | GCCATTCGAGGAGAATATTT+TGG | + | chr5_2:64719954-64719973 | Msa0782060:CDS | 40.0% |
| CGTTGTTCATATGTGTGCTA+AGG | - | chr5_2:64720580-64720599 | None:intergenic | 40.0% | |
| TAGCACACATATGAACAACG+AGG | + | chr5_2:64720580-64720599 | Msa0782060:CDS | 40.0% | |
| !! | CTTGAACTTTTGAAGGCTGA+AGG | - | chr5_2:64720638-64720657 | None:intergenic | 40.0% |
| ! | AAGGCTGCTTGAACTTTTGA+AGG | - | chr5_2:64720645-64720664 | None:intergenic | 40.0% |
| CGATTCGTTTATACCATGGA+AGG | - | chr5_2:64720664-64720683 | None:intergenic | 40.0% | |
| GTCAGAATTGAGAAAGATGG+AGG | + | chr5_2:64721117-64721136 | Msa0782060:CDS | 40.0% | |
| ! | TGGTGTAATTCTCTGGGAAT+GGG | - | chr5_2:64721165-64721184 | None:intergenic | 40.0% |
| GCAAAGTGGTGTAATTCTCT+GGG | - | chr5_2:64721171-64721190 | None:intergenic | 40.0% | |
| AGAAACGAAATCACGCAAAG+TGG | - | chr5_2:64721185-64721204 | None:intergenic | 40.0% | |
| TTGCGTGATTTCGTTTCTAC+AGG | + | chr5_2:64721187-64721206 | Msa0782060:CDS | 40.0% | |
| TGCGTGATTTCGTTTCTACA+GGG | + | chr5_2:64721188-64721207 | Msa0782060:CDS | 40.0% | |
| GGGTTAATTGCCACTCTATA+TGG | + | chr5_2:64721208-64721227 | Msa0782060:CDS | 40.0% | |
| CGTACCATAACCATATAGAG+TGG | - | chr5_2:64721221-64721240 | None:intergenic | 40.0% | |
| !! | TAGATATTGGTTCCCCAAAG+AGG | + | chr5_2:64721323-64721342 | Msa0782060:intron | 40.0% |
| TAGAAAAAGGAGAGAGGATG+TGG | + | chr5_2:64721503-64721522 | Msa0782060:intron | 40.0% | |
| GATGTGGACACAGCAATATA+AGG | + | chr5_2:64721519-64721538 | Msa0782060:intron | 40.0% | |
| ! | GGAGAGAGAATTTGTTCACA+AGG | + | chr5_2:64721540-64721559 | Msa0782060:intron | 40.0% |
| ATCTTGACAGCAGTAGAAGA+AGG | + | chr5_2:64721582-64721601 | Msa0782060:intron | 40.0% | |
| AACGTGACTTAAGTAACGCT+GGG | - | chr5_2:64721780-64721799 | None:intergenic | 40.0% | |
| TATAAGATGGGAGCTGCATA+AGG | + | chr5_2:64721899-64721918 | Msa0782060:intron | 40.0% | |
| ! | AACCATTTGATGGGTCTTCT+GGG | - | chr5_2:64722254-64722273 | None:intergenic | 40.0% |
| ! | TAACCATTTGATGGGTCTTC+TGG | - | chr5_2:64722255-64722274 | None:intergenic | 40.0% |
| GAAGACCCATCAAATGGTTA+TGG | + | chr5_2:64722255-64722274 | Msa0782060:CDS | 40.0% | |
| GAACGACCATAACCATTTGA+TGG | - | chr5_2:64722264-64722283 | None:intergenic | 40.0% | |
| AGATCAGAGAATTATCCCGT+CGG | + | chr5_2:64722288-64722307 | Msa0782060:CDS | 40.0% | |
| ! | ATTTGGTGGCAAAATTCCGA+CGG | - | chr5_2:64722307-64722326 | None:intergenic | 40.0% |
| !!! | ACTCATGGACTTTTAGGACT+AGG | + | chr5_2:64722369-64722388 | Msa0782060:CDS | 40.0% |
| GTCTTCTCCATGATAATCTG+GGG | + | chr5_2:64722395-64722414 | Msa0782060:intron | 40.0% | |
| AAAGTAGCCCCAGATTATCA+TGG | - | chr5_2:64722405-64722424 | None:intergenic | 40.0% | |
| AATATGTACTCCCACTGGAA+TGG | + | chr5_2:64722451-64722470 | Msa0782060:intron | 40.0% | |
| ! | TGCTAATTTGGAGCTTAGTC+CGG | - | chr5_2:64722754-64722773 | None:intergenic | 40.0% |
| GACTAAGCTCCAAATTAGCA+GGG | + | chr5_2:64722754-64722773 | Msa0782060:intron | 40.0% | |
| ! | CTTTCAACTATCCGGTTTTC+AGG | - | chr5_2:64722783-64722802 | None:intergenic | 40.0% |
| TCGCAAAGAACAAACACCTA+TGG | + | chr5_2:64722897-64722916 | Msa0782060:intron | 40.0% | |
| ! | GAGGCATTAATGAGAACACA+TGG | + | chr5_2:64722935-64722954 | Msa0782060:intron | 40.0% |
| GGATCAATTTCCTTATCCGT+TGG | - | chr5_2:64722986-64723005 | None:intergenic | 40.0% | |
| ATAAAGAGAGTAGAGAGTCG+TGG | + | chr5_2:64723258-64723277 | Msa0782060:intron | 40.0% | |
| !! | AGATTTGCTGCAAGTGTTCT+GGG | - | chr5_2:64723389-64723408 | None:intergenic | 40.0% |
| ATGAGAGAGTGAGATTGCTA+GGG | - | chr5_2:64723792-64723811 | None:intergenic | 40.0% | |
| GCCAATGTCAAGTCAAACTA+TGG | - | chr5_2:64723991-64724010 | None:intergenic | 40.0% | |
| !! | TAGTTTGACTTGACATTGGC+AGG | + | chr5_2:64723991-64724010 | Msa0782060:intron | 40.0% |
| CCTCGAGTTAATGTTATGGA+TGG | - | chr5_2:64724145-64724164 | None:intergenic | 40.0% | |
| CCATCCATAACATTAACTCG+AGG | + | chr5_2:64724142-64724161 | Msa0782060:CDS | 40.0% | |
| CTCAATGTCTCAACAACAAG+GGG | - | chr5_2:64724207-64724226 | None:intergenic | 40.0% | |
| GGAATAGCTTGATTCTTGCA+AGG | + | chr5_2:64724253-64724272 | Msa0782060:CDS | 40.0% | |
| !! | CATTTGGCATCAAAGGCATT+AGG | + | chr5_2:64724300-64724319 | Msa0782060:CDS | 40.0% |
| GCATTAGGTAGTGATAAACC+TGG | + | chr5_2:64724315-64724334 | Msa0782060:CDS | 40.0% | |
| GTTGTGCATTGCAAATGATG+TGG | + | chr5_2:64724349-64724368 | Msa0782060:CDS | 40.0% | |
| TTGATATACTGCTCCAAGGT+GGG | - | chr5_2:64724568-64724587 | None:intergenic | 40.0% | |
| TTTGATATACTGCTCCAAGG+TGG | - | chr5_2:64724569-64724588 | None:intergenic | 40.0% | |
| TTCTTACCCAACAAGCAACA+AGG | + | chr5_2:64724613-64724632 | Msa0782060:intron | 40.0% | |
| GCAGGATTGCCTTCTAATAT+TGG | - | chr5_2:64724813-64724832 | None:intergenic | 40.0% | |
| AAGGCGAAAACATTGAATGC+AGG | - | chr5_2:64724831-64724850 | None:intergenic | 40.0% | |
| AGAAAGGAACATGATGAGTG+CGG | - | chr5_2:64724886-64724905 | None:intergenic | 40.0% | |
| GCAGAACGAAACAAAAGCAA+TGG | - | chr5_2:64724994-64725013 | None:intergenic | 40.0% | |
| ATGGCTAAGCAGGAAAAAGT+GGG | - | chr5_2:64725021-64725040 | None:intergenic | 40.0% | |
| TATGGCTAAGCAGGAAAAAG+TGG | - | chr5_2:64725022-64725041 | None:intergenic | 40.0% | |
| ACTTGAATCTATGGCTAAGC+AGG | - | chr5_2:64725031-64725050 | None:intergenic | 40.0% | |
| GCTTAGCCATAGATTCAAGT+CGG | + | chr5_2:64725031-64725050 | Msa0782060:CDS | 40.0% | |
| GCAATTGTCTCTGATTCAGC+CGG | + | chr5_2:64719534-64719553 | Msa0782060:CDS | 45.0% | |
| ATTCTTCATACCGCCATTCG+AGG | + | chr5_2:64719942-64719961 | Msa0782060:CDS | 45.0% | |
| ! | GGATTAGCAAGGAGTTTGAG+AGG | - | chr5_2:64720614-64720633 | None:intergenic | 45.0% |
| !! | GAACTTTTGAAGGCTGAAGG+CGG | - | chr5_2:64720635-64720654 | None:intergenic | 45.0% |
| AAAGTTCAAGCAGCCTTCCA+TGG | + | chr5_2:64720648-64720667 | Msa0782060:CDS | 45.0% | |
| TCTTGCCAAAGACATGCTTG+CGG | + | chr5_2:64721066-64721085 | Msa0782060:intron | 45.0% | |
| !! | ACTGTTGTTTCAGCATCCAG+TGG | - | chr5_2:64721094-64721113 | None:intergenic | 45.0% |
| ! | TGTAATTCTCTGGGAATGGG+GGG | - | chr5_2:64721162-64721181 | None:intergenic | 45.0% |
| ! | GTGTAATTCTCTGGGAATGG+GGG | - | chr5_2:64721163-64721182 | None:intergenic | 45.0% |
| ! | GGTGTAATTCTCTGGGAATG+GGG | - | chr5_2:64721164-64721183 | None:intergenic | 45.0% |
| ! | GTGGTGTAATTCTCTGGGAA+TGG | - | chr5_2:64721166-64721185 | None:intergenic | 45.0% |
| CGCAAAGTGGTGTAATTCTC+TGG | - | chr5_2:64721172-64721191 | None:intergenic | 45.0% | |
| AGAGAAGAGTCTGGGTCTTA+TGG | + | chr5_2:64721646-64721665 | Msa0782060:intron | 45.0% | |
| ! | AAGAGTCTGGGTCTTATGGA+AGG | + | chr5_2:64721650-64721669 | Msa0782060:intron | 45.0% |
| CAACGTGACTTAAGTAACGC+TGG | - | chr5_2:64721781-64721800 | None:intergenic | 45.0% | |
| ! | CCTTAACTCACGTTGGTGTT+CGG | - | chr5_2:64721845-64721864 | None:intergenic | 45.0% |
| AACACCAACGTGAGTTAAGG+TGG | + | chr5_2:64721845-64721864 | Msa0782060:intron | 45.0% | |
| TTTGCCACCTTAACTCACGT+TGG | - | chr5_2:64721852-64721871 | None:intergenic | 45.0% | |
| ! | CTCAGTTAATCTGGGACAGA+GGG | - | chr5_2:64721956-64721975 | None:intergenic | 45.0% |
| ! | ACTCAGTTAATCTGGGACAG+AGG | - | chr5_2:64721957-64721976 | None:intergenic | 45.0% |
| ! | TTTGGTGGCAAAATTCCGAC+GGG | - | chr5_2:64722306-64722325 | None:intergenic | 45.0% |
| ! | AATTTGGAGCTTAGTCCGGA+AGG | - | chr5_2:64722750-64722769 | None:intergenic | 45.0% |
| GGACTAAGCTCCAAATTAGC+AGG | + | chr5_2:64722753-64722772 | Msa0782060:intron | 45.0% | |
| TTCAGGGAACCCTGCTAATT+TGG | - | chr5_2:64722766-64722785 | None:intergenic | 45.0% | |
| ! | AGAACACATGGAGCATTCAC+CGG | + | chr5_2:64722947-64722966 | Msa0782060:intron | 45.0% |
| CTCACGCAGATGTATGTCAT+TGG | - | chr5_2:64723322-64723341 | None:intergenic | 45.0% | |
| !! | GATTTGCTGCAAGTGTTCTG+GGG | - | chr5_2:64723388-64723407 | None:intergenic | 45.0% |
| !! | GAGATTTGCTGCAAGTGTTC+TGG | - | chr5_2:64723390-64723409 | None:intergenic | 45.0% |
| TCCTAGAAGCCACAAAACCA+GGG | - | chr5_2:64723635-64723654 | None:intergenic | 45.0% | |
| ATCCTAGAAGCCACAAAACC+AGG | - | chr5_2:64723636-64723655 | None:intergenic | 45.0% | |
| !!! | GTTTTGTGGCTTCTAGGATG+AGG | + | chr5_2:64723637-64723656 | Msa0782060:intron | 45.0% |
| TGGTACATAAGTGAGGGACT+TGG | - | chr5_2:64723669-64723688 | None:intergenic | 45.0% | |
| TGAGAGAGTGAGATTGCTAG+GGG | - | chr5_2:64723791-64723810 | None:intergenic | 45.0% | |
| GATGAGAGAGTGAGATTGCT+AGG | - | chr5_2:64723793-64723812 | None:intergenic | 45.0% | |
| !! | TTTGACTTGACATTGGCAGG+TGG | + | chr5_2:64723994-64724013 | Msa0782060:intron | 45.0% |
| TGACATTGGCAGGTGGAATA+AGG | + | chr5_2:64724001-64724020 | Msa0782060:intron | 45.0% | |
| TTCGCCTTTGCTTCTCTTAG+TGG | + | chr5_2:64724843-64724862 | Msa0782060:CDS | 45.0% | |
| GTTTCAGTGGCAAACTCATG+CGG | - | chr5_2:64724941-64724960 | None:intergenic | 45.0% | |
| TGTTTGCCTGTGGCTTTCTA+TGG | + | chr5_2:64725080-64725099 | Msa0782060:CDS | 45.0% | |
| GAAATGCCATAGAAAGCCAC+AGG | - | chr5_2:64725089-64725108 | None:intergenic | 45.0% | |
| !! | TTAAATATATATATATGTTA+TGG | + | chr5_2:64720518-64720537 | Msa0782060:intron | 5.0% |
| !! | AAAATTTATGAATATTTATA+AGG | + | chr5_2:64720983-64721002 | Msa0782060:intron | 5.0% |
| ATTGTCTCTGATTCAGCCGG+CGG | + | chr5_2:64719537-64719556 | Msa0782060:CDS | 50.0% | |
| TACATGTAATGCAGTGCCGC+CGG | - | chr5_2:64719556-64719575 | None:intergenic | 50.0% | |
| TTGGAAATGGGGAATGAGCG+TGG | + | chr5_2:64719690-64719709 | Msa0782060:CDS | 50.0% | |
| AGCAAGGAGTTTGAGAGGAG+TGG | - | chr5_2:64720609-64720628 | None:intergenic | 50.0% | |
| TGGTTCCGCAAGCATGTCTT+TGG | - | chr5_2:64721074-64721093 | None:intergenic | 50.0% | |
| GGGGGGACTATCATATGATG+AGG | - | chr5_2:64721145-64721164 | None:intergenic | 50.0% | |
| AACGTAAGCGGGTCCAATGT+TGG | + | chr5_2:64721354-64721373 | Msa0782060:intron | 50.0% | |
| !!! | TAACTCACGCGGGGGTATTT+TGG | - | chr5_2:64721739-64721758 | None:intergenic | 50.0% |
| TCTGCGTGAGTTAACTCACG+CGG | - | chr5_2:64721750-64721769 | None:intergenic | 50.0% | |
| CCGAACACCAACGTGAGTTA+AGG | + | chr5_2:64721842-64721861 | Msa0782060:intron | 50.0% | |
| GACCCAGAAGACCCATCAAA+TGG | + | chr5_2:64722249-64722268 | Msa0782060:CDS | 50.0% | |
| TAGCAGGGTTCCCTGAAAAC+CGG | + | chr5_2:64722769-64722788 | Msa0782060:intron | 50.0% | |
| CCAACAGCTGACTACTCCAT+AGG | - | chr5_2:64722916-64722935 | None:intergenic | 50.0% | |
| CCTATGGAGTAGTCAGCTGT+TGG | + | chr5_2:64722913-64722932 | Msa0782060:intron | 50.0% | |
| ATGGAGTAGTCAGCTGTTGG+AGG | + | chr5_2:64722916-64722935 | Msa0782060:intron | 50.0% | |
| ! | GAACACATGGAGCATTCACC+GGG | + | chr5_2:64722948-64722967 | Msa0782060:intron | 50.0% |
| ! | CATCTGCGTGAGAGAGCATA+TGG | + | chr5_2:64723330-64723349 | Msa0782060:intron | 50.0% |
| GGCATGCCCAACAAATCTAG+AGG | - | chr5_2:64723614-64723633 | None:intergenic | 50.0% | |
| !! | TAGATTTGTTGGGCATGCCC+TGG | + | chr5_2:64723615-64723634 | Msa0782060:intron | 50.0% |
| !! | CACGAAGGAGACGCCATTTT+TGG | + | chr5_2:64724059-64724078 | Msa0782060:CDS | 50.0% |
| TGCTTGTGGCAGTGAAGTAC+AGG | + | chr5_2:64724178-64724197 | Msa0782060:CDS | 50.0% | |
| GATTCTTGCAAGGGATGACG+AGG | + | chr5_2:64724263-64724282 | Msa0782060:CDS | 50.0% | |
| TATTGAGCTCGCTGTGGTGA+AGG | - | chr5_2:64724766-64724785 | None:intergenic | 50.0% | |
| GAGGCCACTAAGAGAAGCAA+AGG | - | chr5_2:64724850-64724869 | None:intergenic | 50.0% | |
| GTGCGGTGAAAGAGAAACAG+AGG | - | chr5_2:64724869-64724888 | None:intergenic | 50.0% | |
| GCTAAGCAGGAAAAAGTGGG+CGG | - | chr5_2:64725018-64725037 | None:intergenic | 50.0% | |
| TGTAGCCACTTGTTTGCCTG+TGG | + | chr5_2:64725070-64725089 | Msa0782060:CDS | 50.0% | |
| GAAAGCCACAGGCAAACAAG+TGG | - | chr5_2:64725078-64725097 | None:intergenic | 50.0% | |
| ! | TCACGGTTATCAACTGGCCT+TGG | - | chr5_2:64725161-64725180 | None:intergenic | 50.0% |
| !! | AGGCTGAAGGCGGATTAGCA+AGG | - | chr5_2:64720625-64720644 | None:intergenic | 55.0% |
| AGACATGCTTGCGGAACCAC+TGG | + | chr5_2:64721075-64721094 | Msa0782060:intron | 55.0% | |
| GTCCAATGTTGGCCATGGTG+TGG | + | chr5_2:64721365-64721384 | Msa0782060:intron | 55.0% | |
| AGCCACACCATGGCCAACAT+TGG | - | chr5_2:64721370-64721389 | None:intergenic | 55.0% | |
| GTGTGGCTATAGCCACACCA+TGG | - | chr5_2:64721380-64721399 | None:intergenic | 55.0% | |
| TGCGTGAGTTAACTCACGCG+GGG | - | chr5_2:64721748-64721767 | None:intergenic | 55.0% | |
| CTGCGTGAGTTAACTCACGC+GGG | - | chr5_2:64721749-64721768 | None:intergenic | 55.0% | |
| !!! | TTGGGCATGCCCTGGTTTTG+TGG | + | chr5_2:64723623-64723642 | Msa0782060:intron | 55.0% |
| !!! | GCCCTGGTTTTGTGGCTTCT+AGG | + | chr5_2:64723631-64723650 | Msa0782060:intron | 55.0% |
| ATCACAGGCACGTCTCACGA+AGG | + | chr5_2:64724044-64724063 | Msa0782060:CDS | 55.0% | |
| GCACAACTAGCAATCTGCCC+AGG | - | chr5_2:64724336-64724355 | None:intergenic | 55.0% | |
| ACCACAGCGAGCTCAATACC+TGG | + | chr5_2:64724768-64724787 | Msa0782060:CDS | 55.0% | |
| ACAGCGAGCTCAATACCTGG+CGG | + | chr5_2:64724771-64724790 | Msa0782060:CDS | 55.0% | |
| ATACCTGGCGGAACAACCGA+AGG | + | chr5_2:64724783-64724802 | Msa0782060:CDS | 55.0% | |
| AGCGGGTCCAATGTTGGCCA+TGG | + | chr5_2:64721360-64721379 | Msa0782060:intron | 60.0% | |
| GCGTGAGTTAACTCACGCGG+GGG | - | chr5_2:64721747-64721766 | None:intergenic | 60.0% | |
| ! | CATGGAGCATTCACCGGGAG+CGG | + | chr5_2:64722953-64722972 | Msa0782060:intron | 60.0% |
| CGGTGGTCGACCAACGGATA+AGG | + | chr5_2:64722973-64722992 | Msa0782060:intron | 60.0% | |
| TATGGCCGCGCAACTGTGTC+TGG | + | chr5_2:64723348-64723367 | Msa0782060:intron | 60.0% | |
| ATGGCCGCGCAACTGTGTCT+GGG | + | chr5_2:64723349-64723368 | Msa0782060:intron | 60.0% | |
| TGCTCCCAGACACAGTTGCG+CGG | - | chr5_2:64723356-64723375 | None:intergenic | 60.0% | |
| AAGCACGGCTACAACGGAGC+AGG | - | chr5_2:64724730-64724749 | None:intergenic | 60.0% | |
| CGCGACAAGCACGGCTACAA+CGG | - | chr5_2:64724736-64724755 | None:intergenic | 60.0% | |
| CGTTGTAGCCGTGCTTGTCG+CGG | + | chr5_2:64724734-64724753 | Msa0782060:CDS | 60.0% | |
| GTTGTAGCCGTGCTTGTCGC+GGG | + | chr5_2:64724735-64724754 | Msa0782060:CDS | 60.0% | |
| !! | GCCAGGTATTGAGCTCGCTG+TGG | - | chr5_2:64724772-64724791 | None:intergenic | 60.0% |
| CTACCTTCGGTTGTTCCGCC+AGG | - | chr5_2:64724789-64724808 | None:intergenic | 60.0% | |
| !! | GGAAGCACCCGCGACAAGCA+CGG | - | chr5_2:64724745-64724764 | None:intergenic | 65.0% |
| ! | GGAGCATTCACCGGGAGCGG+TGG | + | chr5_2:64722956-64722975 | Msa0782060:intron | 70.0% |
| CGTTGGTCGACCACCGCTCC+CGG | - | chr5_2:64722969-64722988 | None:intergenic | 70.0% | |
| CGGGAGCGGTGGTCGACCAA+CGG | + | chr5_2:64722967-64722986 | Msa0782060:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 64719393 | 64725190 | 64719393 | ID=Msa0782060;Name=Msa0782060 |
| chr5_2 | mRNA | 64719393 | 64725190 | 64719393 | ID=Msa0782060-mRNA-1;Parent=Msa0782060;Name=Msa0782060-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|1|1|6|0|648 |
| chr5_2 | exon | 64719393 | 64719975 | 64719393 | ID=Msa0782060-mRNA-1:exon:19449;Parent=Msa0782060-mRNA-1 |
| chr5_2 | exon | 64720546 | 64720692 | 64720546 | ID=Msa0782060-mRNA-1:exon:19450;Parent=Msa0782060-mRNA-1 |
| chr5_2 | exon | 64721077 | 64721235 | 64721077 | ID=Msa0782060-mRNA-1:exon:19451;Parent=Msa0782060-mRNA-1 |
| chr5_2 | exon | 64722232 | 64722390 | 64722232 | ID=Msa0782060-mRNA-1:exon:19452;Parent=Msa0782060-mRNA-1 |
| chr5_2 | exon | 64724013 | 64724389 | 64724013 | ID=Msa0782060-mRNA-1:exon:19453;Parent=Msa0782060-mRNA-1 |
| chr5_2 | exon | 64724669 | 64725190 | 64724669 | ID=Msa0782060-mRNA-1:exon:19454;Parent=Msa0782060-mRNA-1 |
| chr5_2 | CDS | 64719393 | 64719975 | 64719393 | ID=Msa0782060-mRNA-1:cds;Parent=Msa0782060-mRNA-1 |
| chr5_2 | CDS | 64720546 | 64720692 | 64720546 | ID=Msa0782060-mRNA-1:cds;Parent=Msa0782060-mRNA-1 |
| chr5_2 | CDS | 64721077 | 64721235 | 64721077 | ID=Msa0782060-mRNA-1:cds;Parent=Msa0782060-mRNA-1 |
| chr5_2 | CDS | 64722232 | 64722390 | 64722232 | ID=Msa0782060-mRNA-1:cds;Parent=Msa0782060-mRNA-1 |
| chr5_2 | CDS | 64724013 | 64724389 | 64724013 | ID=Msa0782060-mRNA-1:cds;Parent=Msa0782060-mRNA-1 |
| chr5_2 | CDS | 64724669 | 64725190 | 64724669 | ID=Msa0782060-mRNA-1:cds;Parent=Msa0782060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
