Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784800 | sp|Q9FEL8|LAX1_MEDTR | 91.304 | 46 | 4 | 0 | 4 | 49 | 1 | 46 | 1.59e-14 | 69.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784800 | A0A1S2XMJ6 | 80.435 | 46 | 9 | 0 | 4 | 49 | 1 | 46 | 2.67e-16 | 82.0 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0784800 | Msa1388510 | 0.806721 | 7.168681e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0784800 | MtrunA17_Chr5g0436811 | 91.304 | 46 | 4 | 0 | 4 | 49 | 1 | 46 | 1.17e-15 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 124 sgRNAs with CRISPR-Local
Find 432 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGCACTTTCCTTCTCTT+TGG | 0.203019 | 5_2:-69480574 | Msa0784800:three_prime_UTR |
| GCTATAATCTTCCCTTTCTT+TGG | 0.207993 | 5_2:-69476835 | Msa0784800:three_prime_UTR |
| CTCAGCTGTAGGGGCTCTTT+TGG | 0.244420 | 5_2:-69476803 | Msa0784800:three_prime_UTR |
| AATCCAATTGCTTTCCAATA+AGG | 0.261089 | 5_2:+69480604 | None:intergenic |
| GTTGGCTATAATCAAGTCTA+TGG | 0.270118 | 5_2:+69474872 | None:intergenic |
| TCACTCGGGCCCAAAGAAAA+TGG | 0.283601 | 5_2:-69478984 | Msa0784800:three_prime_UTR |
| TCAATGCGTTTGTGGTAATA+TGG | 0.285633 | 5_2:-69475206 | Msa0784800:three_prime_UTR |
| AGCCCCTACAGCTGAGTTAA+TGG | 0.290504 | 5_2:+69476810 | None:intergenic |
| AGGGTTTGCTTGGTCCTTAT+TGG | 0.294773 | 5_2:-69480618 | Msa0784800:three_prime_UTR |
| ATCAAACAAGTTGACACATT+TGG | 0.304064 | 5_2:-69475132 | Msa0784800:three_prime_UTR |
| TCTCAGCTAGGAATGATTTC+AGG | 0.305170 | 5_2:-69481045 | Msa0784800:CDS |
| CATTCCATAACTATAGGATT+TGG | 0.310810 | 5_2:-69480317 | Msa0784800:three_prime_UTR |
| CTGCTCATATGCTCACTTAT+AGG | 0.316484 | 5_2:-69476750 | Msa0784800:three_prime_UTR |
| TGGGTTACTATTGTAGGCTT+TGG | 0.318547 | 5_2:-69475186 | Msa0784800:three_prime_UTR |
| ATTTGGTCTTTCCTTGGCCT+TGG | 0.319258 | 5_2:-69480300 | Msa0784800:three_prime_UTR |
| AAATTGCAGTTTATCACCTT+TGG | 0.321885 | 5_2:-69476976 | Msa0784800:intron |
| ATCTGCAATTGCTGTCTATT+GGG | 0.331890 | 5_2:-69477462 | Msa0784800:three_prime_UTR |
| ATCATATTCCAAGTCTTCTA+TGG | 0.331967 | 5_2:-69481021 | Msa0784800:CDS |
| ACCATTGCAGCCATTGTTCA+TGG | 0.335047 | 5_2:-69480249 | Msa0784800:three_prime_UTR |
| ACTATTGTAGGCTTTGGATT+TGG | 0.339464 | 5_2:-69475180 | Msa0784800:three_prime_UTR |
| TTCTCTCTTCTTCCTCGTAA+TGG | 0.341226 | 5_2:-69477404 | Msa0784800:three_prime_UTR |
| CATCTGCAATTGCTGTCTAT+TGG | 0.344851 | 5_2:-69477463 | Msa0784800:three_prime_UTR |
| ATTGCTGTCTATTGGGCCTT+TGG | 0.346170 | 5_2:-69477455 | Msa0784800:three_prime_UTR |
| GTAATATGGGTTACTATTGT+AGG | 0.347021 | 5_2:-69475192 | Msa0784800:three_prime_UTR |
| GCCCCTACAGCTGAGTTAAT+GGG | 0.351357 | 5_2:+69476811 | None:intergenic |
| TGGTTGGAAGCTGGTAGTTT+TGG | 0.352322 | 5_2:+69475081 | None:intergenic |
| TACCTTCATTCCATAACTAT+AGG | 0.359384 | 5_2:-69480323 | Msa0784800:three_prime_UTR |
| CCAAGTCTTCTATGGATTGA+TGG | 0.363039 | 5_2:-69481013 | Msa0784800:CDS |
| TGGGTTTGGTGATTGGTAAT+TGG | 0.379644 | 5_2:-69474843 | Msa0784800:three_prime_UTR |
| TGTCCAGCTTGGAATAACTT+TGG | 0.383837 | 5_2:+69475242 | None:intergenic |
| TCACCAAACCCAACATTTGT+TGG | 0.386065 | 5_2:+69474854 | None:intergenic |
| TACCTGTGGTGATACCAATA+TGG | 0.387905 | 5_2:-69476864 | Msa0784800:three_prime_UTR |
| TATAGGATTTGGTCTTTCCT+TGG | 0.389353 | 5_2:-69480306 | Msa0784800:three_prime_UTR |
| TAGCCAACAAATGTTGGGTT+TGG | 0.389422 | 5_2:-69474857 | Msa0784800:three_prime_UTR |
| CCTAGCTGAGAGAATGAGTA+TGG | 0.392121 | 5_2:+69481057 | None:intergenic |
| TTGTGCTATGCAGGTTGCTC+AGG | 0.396612 | 5_2:-69481094 | Msa0784800:intron |
| GTCCAGCTTGGAATAACTTT+GGG | 0.396864 | 5_2:+69475243 | None:intergenic |
| GGTCCTTATTGGAAAGCAAT+TGG | 0.400537 | 5_2:-69480607 | Msa0784800:three_prime_UTR |
| ACAATAATAGTATATCTATA+TGG | 0.402046 | 5_2:+69474972 | None:intergenic |
| CTCTTCTTCCTCGTAATGGC+TGG | 0.404036 | 5_2:-69477400 | Msa0784800:three_prime_UTR |
| CAAATGTTGGGTTTGGTGAT+TGG | 0.414399 | 5_2:-69474850 | Msa0784800:three_prime_UTR |
| GCCCCATTAACTCAGCTGTA+GGG | 0.417428 | 5_2:-69476813 | Msa0784800:three_prime_UTR |
| TAAATGATCACTTGGATAAG+AGG | 0.417986 | 5_2:-69480392 | Msa0784800:three_prime_UTR |
| AAAGGAGGAAGTCCTGCTTC+TGG | 0.424897 | 5_2:-69481458 | Msa0784800:CDS |
| TGATTATAGCCAACAAATGT+TGG | 0.425150 | 5_2:-69474863 | Msa0784800:three_prime_UTR |
| AAGACCAAATCCTATAGTTA+TGG | 0.426171 | 5_2:+69480313 | None:intergenic |
| CGTAATGGCTGGCGTGATGC+TGG | 0.434368 | 5_2:-69477389 | Msa0784800:three_prime_UTR |
| ATTGTAGGCTTTGGATTTGG+AGG | 0.436501 | 5_2:-69475177 | Msa0784800:three_prime_UTR |
| TGTGAAGTGGTTTGAAGTGT+TGG | 0.437608 | 5_2:-69480641 | Msa0784800:intron |
| TCTATGGATTGATGGGTAGT+TGG | 0.437857 | 5_2:-69481005 | Msa0784800:exon |
| GATTATAGCCAACAAATGTT+GGG | 0.440765 | 5_2:-69474862 | Msa0784800:three_prime_UTR |
| TTGTACATAGTCTTATGTAT+TGG | 0.445534 | 5_2:+69474772 | None:intergenic |
| ACAAACATACTCTATACTTT+CGG | 0.447950 | 5_2:-69478941 | Msa0784800:three_prime_UTR |
| TAGGCTTTGGATTTGGAGGG+TGG | 0.452037 | 5_2:-69475173 | Msa0784800:three_prime_UTR |
| GAGTTAATGGGGCCAAAGAA+AGG | 0.453833 | 5_2:+69476823 | None:intergenic |
| TATACTATTATTGTTAATGC+TGG | 0.459991 | 5_2:-69474963 | Msa0784800:three_prime_UTR |
| TGCAGCCATTGTTCATGGCC+AGG | 0.460038 | 5_2:-69480244 | Msa0784800:intron |
| CCATCAATCCATAGAAGACT+TGG | 0.461378 | 5_2:+69481013 | None:intergenic |
| GAAGTGTTGGAGGGTTTGCT+TGG | 0.471586 | 5_2:-69480628 | Msa0784800:three_prime_UTR |
| AAAATGGTTTGGTATTTCAC+TGG | 0.481269 | 5_2:-69478968 | Msa0784800:three_prime_UTR |
| GTGAGCATATGAGCAGAAGC+AGG | 0.483246 | 5_2:+69476757 | None:intergenic |
| ATCCTATAGTTATGGAATGA+AGG | 0.485031 | 5_2:+69480321 | None:intergenic |
| GAAGAAAGAGAGGAAGAGAA+AGG | 0.487462 | 5_2:-69481476 | Msa0784800:CDS |
| TAGGTCTGCTTCAGCAAGAC+AGG | 0.490465 | 5_2:-69476731 | Msa0784800:intron |
| CGGGCCCAAAGAAAATGGTT+TGG | 0.497650 | 5_2:-69478979 | Msa0784800:three_prime_UTR |
| CAATGCGTTTGTGGTAATAT+GGG | 0.499484 | 5_2:-69475205 | Msa0784800:three_prime_UTR |
| CATTGGAATGGTCTAAAAGT+TGG | 0.499848 | 5_2:+69477429 | None:intergenic |
| TTGTAGGCTTTGGATTTGGA+GGG | 0.502238 | 5_2:-69475176 | Msa0784800:three_prime_UTR |
| GGTTGAAAATGTTGTTCACT+CGG | 0.507034 | 5_2:-69478999 | Msa0784800:three_prime_UTR |
| TTATTGGAAAGCAATTGGAT+TGG | 0.508834 | 5_2:-69480602 | Msa0784800:three_prime_UTR |
| CAAGTCTTCTATGGATTGAT+GGG | 0.510221 | 5_2:-69481012 | Msa0784800:CDS |
| GGCCCCATTAACTCAGCTGT+AGG | 0.513509 | 5_2:-69476814 | Msa0784800:three_prime_UTR |
| TGCCCAAAGTTATTCCAAGC+TGG | 0.514353 | 5_2:-69475245 | Msa0784800:three_prime_UTR |
| CCCCATTAACTCAGCTGTAG+GGG | 0.521146 | 5_2:-69476812 | Msa0784800:three_prime_UTR |
| GAAAGTATAGAGTATGTTTG+TGG | 0.523457 | 5_2:+69478943 | None:intergenic |
| ACCTTGCACAAGCTATGAGC+TGG | 0.526422 | 5_2:+69480542 | None:intergenic |
| TAGATAGCTTTGAACTTCTG+AGG | 0.532486 | 5_2:+69477524 | None:intergenic |
| GAAGTGGTTTGAAGTGTTGG+AGG | 0.535568 | 5_2:-69480638 | Msa0784800:intron |
| AATATTGATGCTCATTCACC+AGG | 0.537918 | 5_2:-69477363 | Msa0784800:intron |
| GTACACCATTGTACTTTGTG+TGG | 0.541542 | 5_2:-69476945 | Msa0784800:three_prime_UTR |
| GTCTAAAAGTTGGTCACCAA+AGG | 0.541669 | 5_2:+69477439 | None:intergenic |
| AGGCTTTGGATTTGGAGGGT+GGG | 0.541795 | 5_2:-69475172 | Msa0784800:three_prime_UTR |
| GACAGCAATTGCAGATGGTA+GGG | 0.544239 | 5_2:+69477469 | None:intergenic |
| GTATGTGATCAATGCGTTTG+TGG | 0.545120 | 5_2:-69475214 | Msa0784800:three_prime_UTR |
| GTTGAAAATGTTGTTCACTC+GGG | 0.547963 | 5_2:-69478998 | Msa0784800:three_prime_UTR |
| AAGTGGTTTGAAGTGTTGGA+GGG | 0.550112 | 5_2:-69480637 | Msa0784800:three_prime_UTR |
| AGGAAGAAGAGAGAAAGCAT+TGG | 0.554247 | 5_2:+69477412 | None:intergenic |
| TGCATTGTATGGTTGGAAGC+TGG | 0.559051 | 5_2:+69475072 | None:intergenic |
| GAAAGAGAGGAAGAGAAAGG+AGG | 0.560980 | 5_2:-69481473 | Msa0784800:CDS |
| ACATACATTAATGTCCAGCT+TGG | 0.561694 | 5_2:+69475231 | None:intergenic |
| ATACTACATAAATGATCACT+TGG | 0.572338 | 5_2:-69480400 | Msa0784800:three_prime_UTR |
| AACATACTCTATACTTTCGG+CGG | 0.574413 | 5_2:-69478938 | Msa0784800:three_prime_UTR |
| AGTTAATGGGGCCAAAGAAA+GGG | 0.576977 | 5_2:+69476824 | None:intergenic |
| AAATTCTTGAAACCAGAAGC+AGG | 0.578656 | 5_2:+69481446 | None:intergenic |
| AACCATATTGGTATCACCAC+AGG | 0.579597 | 5_2:+69476862 | None:intergenic |
| TCAGTGATGCATTGTATGGT+TGG | 0.580059 | 5_2:+69475065 | None:intergenic |
| TGAGCTGAATGAAGAAAGAG+AGG | 0.580396 | 5_2:-69481486 | Msa0784800:CDS |
| TACACCATTGTACTTTGTGT+GGG | 0.581136 | 5_2:-69476944 | Msa0784800:three_prime_UTR |
| TTTGTGTGGGAGAAAGTGAT+AGG | 0.582806 | 5_2:-69476931 | Msa0784800:three_prime_UTR |
| ATGTAGTCATGCCAAGGCCA+AGG | 0.583435 | 5_2:+69480289 | None:intergenic |
| AGACAGCAATTGCAGATGGT+AGG | 0.583784 | 5_2:+69477468 | None:intergenic |
| GCCATGAACAATGGCTGCAA+TGG | 0.586565 | 5_2:+69480248 | None:intergenic |
| TGAGCATATGAGCAGAAGCA+GGG | 0.587049 | 5_2:+69476758 | None:intergenic |
| TGTTGAGTACAGAAGCAGAA+AGG | 0.592653 | 5_2:-69480956 | Msa0784800:three_prime_UTR |
| GAAGAGAGAAAGCATTGGAA+TGG | 0.598851 | 5_2:+69477417 | None:intergenic |
| ACATACTCTATACTTTCGGC+GGG | 0.607513 | 5_2:-69478937 | Msa0784800:three_prime_UTR |
| GCATGACTACATACACAGCT+TGG | 0.609167 | 5_2:-69480278 | Msa0784800:three_prime_UTR |
| CCATACTCATTCTCTCAGCT+AGG | 0.611915 | 5_2:-69481057 | Msa0784800:CDS |
| CAATAGACAGCAATTGCAGA+TGG | 0.612371 | 5_2:+69477464 | None:intergenic |
| GGATAACAGATCCAAAGAGA+AGG | 0.614630 | 5_2:+69480563 | None:intergenic |
| CCCCTACAGCTGAGTTAATG+GGG | 0.615086 | 5_2:+69476812 | None:intergenic |
| CTGTGTATGTAGTCATGCCA+AGG | 0.617531 | 5_2:+69480283 | None:intergenic |
| TCCAGCTCATAGCTTGTGCA+AGG | 0.620806 | 5_2:-69480543 | Msa0784800:intron |
| ATCACTTGGATAAGAGGACA+TGG | 0.631357 | 5_2:-69480386 | Msa0784800:three_prime_UTR |
| AAAGATTGCCTTGCTACACA+AGG | 0.641666 | 5_2:+69474936 | None:intergenic |
| GGCATTAGCAAGGTTACCTG+TGG | 0.653742 | 5_2:-69476878 | Msa0784800:three_prime_UTR |
| CAATGCATCACTGAAAAGTG+AGG | 0.654344 | 5_2:-69475056 | Msa0784800:three_prime_UTR |
| GGGAAATCATGCATGCAATG+TGG | 0.656972 | 5_2:-69477550 | Msa0784800:three_prime_UTR |
| CTGGTGTTCCTTGTGTAGCA+AGG | 0.659070 | 5_2:-69474944 | Msa0784800:three_prime_UTR |
| TTCTCCCACACAAAGTACAA+TGG | 0.674304 | 5_2:+69476940 | None:intergenic |
| TGGTGTACAAGCAAATCCAA+AGG | 0.675091 | 5_2:+69476960 | None:intergenic |
| GCATCACGCCAGCCATTACG+AGG | 0.679718 | 5_2:+69477392 | None:intergenic |
| ATTTACCTGGCCATGAACAA+TGG | 0.687542 | 5_2:+69480239 | None:intergenic |
| ACAATGTTATCAGAGAAACA+AGG | 0.767084 | 5_2:-69481545 | Msa0784800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTAATTTAATTTT+TGG | - | chr5_2:69475339-69475358 | Msa0784800:intron | 0.0% |
| !!! | TATATTTTTTCTTATATTTG+GGG | + | chr5_2:69475579-69475598 | None:intergenic | 10.0% |
| !!! | TTTCAATTATTTTTTTGTTT+AGG | - | chr5_2:69476801-69476820 | Msa0784800:three_prime_UTR | 10.0% |
| !!! | TTCAATTATTTTTTTGTTTA+GGG | - | chr5_2:69476802-69476821 | Msa0784800:three_prime_UTR | 10.0% |
| !! | AAATTAGATTAAAAAAGATT+TGG | + | chr5_2:69477569-69477588 | None:intergenic | 10.0% |
| !!! | TTATTTATTTTATAAATCCA+TGG | + | chr5_2:69478387-69478406 | None:intergenic | 10.0% |
| !!! | TAAAAAAAAATGTTGTTTTA+GGG | - | chr5_2:69479433-69479452 | Msa0784800:intron | 10.0% |
| !! | ATTTGAATGATTTATAAAAT+TGG | + | chr5_2:69480612-69480631 | None:intergenic | 10.0% |
| !!! | AATCTTTTTATCATTTAATT+TGG | - | chr5_2:69481538-69481557 | Msa0784800:CDS | 10.0% |
| !!! | ATATTTTTTCTTATATTTGG+GGG | + | chr5_2:69475578-69475597 | None:intergenic | 15.0% |
| !! | TTTGATATCTCAAAATATTA+CGG | - | chr5_2:69475654-69475673 | Msa0784800:intron | 15.0% |
| !!! | GACTATTTTTTAAAAACTTT+AGG | - | chr5_2:69475752-69475771 | Msa0784800:intron | 15.0% |
| !! | TTATTTGATTAGATAATTGA+AGG | - | chr5_2:69475972-69475991 | Msa0784800:intron | 15.0% |
| !!! | CAGTTATTTTATTTACTATT+CGG | - | chr5_2:69476641-69476660 | Msa0784800:intron | 15.0% |
| !!! | AGTTATTTTATTTACTATTC+GGG | - | chr5_2:69476642-69476661 | Msa0784800:intron | 15.0% |
| !!! | ACAATATATTTTCTATACTA+TGG | - | chr5_2:69477683-69477702 | Msa0784800:intron | 15.0% |
| !!! | AATCAAAATAAGGTTAATTT+TGG | + | chr5_2:69478088-69478107 | None:intergenic | 15.0% |
| !!! | CAATTGTTTTAATCAAAATA+AGG | + | chr5_2:69478098-69478117 | None:intergenic | 15.0% |
| !!! | CTTATTTTGATTAAAACAAT+TGG | - | chr5_2:69478096-69478115 | Msa0784800:intron | 15.0% |
| !!! | TTGATATATTTTAACCTTTT+AGG | - | chr5_2:69478483-69478502 | Msa0784800:intron | 15.0% |
| !!! | TGATATATTTTAACCTTTTA+GGG | - | chr5_2:69478484-69478503 | Msa0784800:intron | 15.0% |
| !! | ATTTGACTAAAAAACAAAAT+AGG | - | chr5_2:69478518-69478537 | Msa0784800:intron | 15.0% |
| !! | TTTGACTAAAAAACAAAATA+GGG | - | chr5_2:69478519-69478538 | Msa0784800:intron | 15.0% |
| !! | ATTTAATATAATCTCCAAAA+TGG | + | chr5_2:69479351-69479370 | None:intergenic | 15.0% |
| !!! | GTAAAAAAAAATGTTGTTTT+AGG | - | chr5_2:69479432-69479451 | Msa0784800:intron | 15.0% |
| !! | AATGAAACCATTAAAAATTT+AGG | - | chr5_2:69479932-69479951 | Msa0784800:intron | 15.0% |
| !! | ACAATAATAGTATATCTATA+TGG | + | chr5_2:69481489-69481508 | None:intergenic | 15.0% |
| !!! | TATTTTTTCTTATATTTGGG+GGG | + | chr5_2:69475577-69475596 | None:intergenic | 20.0% |
| !! | CATAAAAAATTTCATGGTTA+CGG | - | chr5_2:69475712-69475731 | Msa0784800:intron | 20.0% |
| !!! | TTTAATTTCATTTTGTGAAG+TGG | - | chr5_2:69475804-69475823 | Msa0784800:intron | 20.0% |
| !!! | ATTGTATCCTTAAAATGTTT+TGG | - | chr5_2:69476991-69477010 | Msa0784800:intron | 20.0% |
| !! | TGTAAATAACATGTAATATC+AGG | - | chr5_2:69477199-69477218 | Msa0784800:intron | 20.0% |
| !! | GTAAATAACATGTAATATCA+GGG | - | chr5_2:69477200-69477219 | Msa0784800:intron | 20.0% |
| !! | TTAGATTAAAAAAGATTTGG+TGG | + | chr5_2:69477566-69477585 | None:intergenic | 20.0% |
| !!! | ATCTAATTTGCTTATTCATT+TGG | - | chr5_2:69477580-69477599 | Msa0784800:intron | 20.0% |
| !! | TATTTGTTTACTAGTTATCT+AGG | - | chr5_2:69477936-69477955 | Msa0784800:intron | 20.0% |
| !! | ATTTGTTTACTAGTTATCTA+GGG | - | chr5_2:69477937-69477956 | Msa0784800:intron | 20.0% |
| !!! | ATTTCATTACCATTTTAAAG+TGG | + | chr5_2:69478051-69478070 | None:intergenic | 20.0% |
| !! | GTGTTATAAATGATAACAAA+AGG | - | chr5_2:69478133-69478152 | Msa0784800:intron | 20.0% |
| !!! | ATATTTTTTACATATGCACT+TGG | - | chr5_2:69478301-69478320 | Msa0784800:intron | 20.0% |
| !!! | CAAAAACACTTGAAATATTT+TGG | + | chr5_2:69478689-69478708 | None:intergenic | 20.0% |
| !!! | CAAAATATTTCAAGTGTTTT+TGG | - | chr5_2:69478687-69478706 | Msa0784800:intron | 20.0% |
| !!! | AGTATGTTAGAAATTTTGAT+GGG | + | chr5_2:69479147-69479166 | None:intergenic | 20.0% |
| !!! | TAGTATGTTAGAAATTTTGA+TGG | + | chr5_2:69479148-69479167 | None:intergenic | 20.0% |
| !!! | TTTAAATGAAAAGTTGGTTT+AGG | + | chr5_2:69479204-69479223 | None:intergenic | 20.0% |
| !! | AATAGGTTTAAATGAAAAGT+TGG | + | chr5_2:69479210-69479229 | None:intergenic | 20.0% |
| !! | TTAAAACAATAAGAATCGAA+GGG | + | chr5_2:69479247-69479266 | None:intergenic | 20.0% |
| !!! | TTTAAAACAATAAGAATCGA+AGG | + | chr5_2:69479248-69479267 | None:intergenic | 20.0% |
| !! | TACAAAAAGTTAAACCAAAT+TGG | + | chr5_2:69479866-69479885 | None:intergenic | 20.0% |
| !!! | CAATTTGCCTAAATTTTTAA+TGG | + | chr5_2:69479942-69479961 | None:intergenic | 20.0% |
| !! | AATTATCAAATATTGATGAG+CGG | + | chr5_2:69479998-69480017 | None:intergenic | 20.0% |
| !! | ATTTATACTGCCATTAATAT+AGG | + | chr5_2:69480579-69480598 | None:intergenic | 20.0% |
| !! | GAATGATTTATAAAATTGGT+GGG | + | chr5_2:69480608-69480627 | None:intergenic | 20.0% |
| !! | TGAATGATTTATAAAATTGG+TGG | + | chr5_2:69480609-69480628 | None:intergenic | 20.0% |
| !!! | TTTATGATACATGATTAGTT+TGG | - | chr5_2:69480638-69480657 | Msa0784800:intron | 20.0% |
| !! | ACTAATAATGAGAATATGTT+AGG | + | chr5_2:69480825-69480844 | None:intergenic | 20.0% |
| !!! | TGTAGAATTTTAGTCAAATA+TGG | - | chr5_2:69480938-69480957 | Msa0784800:three_prime_UTR | 20.0% |
| !! | TATACTATTATTGTTAATGC+TGG | - | chr5_2:69481495-69481514 | Msa0784800:CDS | 20.0% |
| !!! | TTGGTTTTTGATAATCATTT+TGG | - | chr5_2:69481557-69481576 | Msa0784800:intron | 20.0% |
| !!! | AGTTTGATTTGATTTGTGTT+TGG | - | chr5_2:69474812-69474831 | Msa0784800:three_prime_UTR | 25.0% |
| !! | ATATTTCTTTACCTGATTTG+AGG | + | chr5_2:69475082-69475101 | None:intergenic | 25.0% |
| ! | ATTAAGTCCACAATTCAATA+TGG | + | chr5_2:69475999-69476018 | None:intergenic | 25.0% |
| ! | TGGACTTAATAACAAGAATT+TGG | - | chr5_2:69476009-69476028 | Msa0784800:intron | 25.0% |
| ! | ATACTACATAAATGATCACT+TGG | - | chr5_2:69476058-69476077 | Msa0784800:intron | 25.0% |
| ! | GGATTTATTCTTGAAATTGT+TGG | + | chr5_2:69476375-69476394 | None:intergenic | 25.0% |
| ! | GATTGAACTAAAGTTGAATA+AGG | - | chr5_2:69476577-69476596 | Msa0784800:intron | 25.0% |
| ! | TTGTTGAATAATTGTTCAAC+CGG | + | chr5_2:69476608-69476627 | None:intergenic | 25.0% |
| !!! | ATTTTATTTACTATTCGGGT+CGG | - | chr5_2:69476646-69476665 | Msa0784800:intron | 25.0% |
| ! | CATGGTTTAACTAACTTAAT+CGG | + | chr5_2:69476706-69476725 | None:intergenic | 25.0% |
| !! | TCAATTAGTATGAGACTTTT+GGG | + | chr5_2:69476730-69476749 | None:intergenic | 25.0% |
| !! | TTCAATTAGTATGAGACTTT+TGG | + | chr5_2:69476731-69476750 | None:intergenic | 25.0% |
| ! | ACTAATTGAATTTCAACAAG+TGG | - | chr5_2:69476741-69476760 | Msa0784800:three_prime_UTR | 25.0% |
| ! | CTAATTGAATTTCAACAAGT+GGG | - | chr5_2:69476742-69476761 | Msa0784800:three_prime_UTR | 25.0% |
| ! | TAATTGAATTTCAACAAGTG+GGG | - | chr5_2:69476743-69476762 | Msa0784800:three_prime_UTR | 25.0% |
| !!! | CATTTTTTGTTTGAAGAAGT+GGG | - | chr5_2:69476768-69476787 | Msa0784800:three_prime_UTR | 25.0% |
| !!! | ATTTTTTGTTTGAAGAAGTG+GGG | - | chr5_2:69476769-69476788 | Msa0784800:three_prime_UTR | 25.0% |
| ! | TTGTTTGGTATAAAAGAAAG+TGG | - | chr5_2:69476921-69476940 | Msa0784800:three_prime_UTR | 25.0% |
| !! | AATGTAGCCAAAACATTTTA+AGG | + | chr5_2:69477001-69477020 | None:intergenic | 25.0% |
| !! | CACACGTTAATTCTAAAAAA+TGG | - | chr5_2:69477171-69477190 | Msa0784800:intron | 25.0% |
| !! | AATACCAAACCATTTTCTTT+GGG | + | chr5_2:69477486-69477505 | None:intergenic | 25.0% |
| !! | AAATACCAAACCATTTTCTT+TGG | + | chr5_2:69477487-69477506 | None:intergenic | 25.0% |
| ! | ACAAACATACTCTATACTTT+CGG | - | chr5_2:69477517-69477536 | Msa0784800:three_prime_UTR | 25.0% |
| ! | ATTAAGAGAAGTTTATTGCA+CGG | - | chr5_2:69477660-69477679 | Msa0784800:intron | 25.0% |
| ! | ATAAGAAGTCCTCATTAAAA+TGG | + | chr5_2:69477724-69477743 | None:intergenic | 25.0% |
| ! | TAAGACAAAACAGTAAAATC+TGG | - | chr5_2:69477745-69477764 | Msa0784800:intron | 25.0% |
| ! | TTTGTTTACTAGTTATCTAG+GGG | - | chr5_2:69477938-69477957 | Msa0784800:intron | 25.0% |
| ! | ATTAAAACAATTGGAAATGC+AGG | - | chr5_2:69478105-69478124 | Msa0784800:intron | 25.0% |
| ! | GAAAACCTAGTTTAAATTTG+AGG | - | chr5_2:69478596-69478615 | Msa0784800:intron | 25.0% |
| ! | ATATGCCTCAAATTTAAACT+AGG | + | chr5_2:69478604-69478623 | None:intergenic | 25.0% |
| !! | TAAATTTGAGGCATATTAGT+AGG | - | chr5_2:69478608-69478627 | Msa0784800:intron | 25.0% |
| ! | TCATTAGATGGAAAAAGTAA+CGG | + | chr5_2:69478634-69478653 | None:intergenic | 25.0% |
| !!! | AATATTTCAAGTGTTTTTGG+AGG | - | chr5_2:69478690-69478709 | Msa0784800:intron | 25.0% |
| ! | AAAAGCAGAGCATATATTTA+TGG | - | chr5_2:69478816-69478835 | Msa0784800:intron | 25.0% |
| ! | AAAGCAGAGCATATATTTAT+GGG | - | chr5_2:69478817-69478836 | Msa0784800:intron | 25.0% |
| ! | GACAAAAATATATATGAACC+TGG | + | chr5_2:69479116-69479135 | None:intergenic | 25.0% |
| !!! | ACACAAAGAGCATATTTTTA+AGG | - | chr5_2:69479558-69479577 | Msa0784800:intron | 25.0% |
| !!! | CACAAAGAGCATATTTTTAA+GGG | - | chr5_2:69479559-69479578 | Msa0784800:intron | 25.0% |
| ! | ATTATAGCCAAAAACCATAT+TGG | + | chr5_2:69479611-69479630 | None:intergenic | 25.0% |
| ! | CTATGTATTGGATATGTTAT+AGG | + | chr5_2:69479789-69479808 | None:intergenic | 25.0% |
| ! | AGTAAAATCTCACTATGTAT+TGG | + | chr5_2:69479801-69479820 | None:intergenic | 25.0% |
| ! | CATAACCATCAACAAATTTA+TGG | + | chr5_2:69480341-69480360 | None:intergenic | 25.0% |
| !!! | CATAAATTTGTTGATGGTTA+TGG | - | chr5_2:69480339-69480358 | Msa0784800:three_prime_UTR | 25.0% |
| ! | TACTAAACAGACCTATAAAA+AGG | + | chr5_2:69480970-69480989 | None:intergenic | 25.0% |
| ! | TTGGCATTGTTTAGAAAAAT+CGG | + | chr5_2:69481119-69481138 | None:intergenic | 25.0% |
| ! | AAAGTGAGGAAAAAAAACTA+TGG | - | chr5_2:69481416-69481435 | Msa0784800:intron | 25.0% |
| ! | GGTGATTAAACAAAAAAAGA+GGG | + | chr5_2:69481468-69481487 | None:intergenic | 25.0% |
| ! | TGGTGATTAAACAAAAAAAG+AGG | + | chr5_2:69481469-69481488 | None:intergenic | 25.0% |
| !!! | TTGTACATAGTCTTATGTAT+TGG | + | chr5_2:69481689-69481708 | None:intergenic | 25.0% |
| ACAATGTTATCAGAGAAACA+AGG | - | chr5_2:69474913-69474932 | Msa0784800:three_prime_UTR | 30.0% | |
| ! | CTGGTTTCAAGAATTTTCTT+TGG | - | chr5_2:69475019-69475038 | Msa0784800:three_prime_UTR | 30.0% |
| ! | TTCAAGAATTTTCTTTGGCA+TGG | - | chr5_2:69475024-69475043 | Msa0784800:three_prime_UTR | 30.0% |
| ATCATATTCCAAGTCTTCTA+TGG | - | chr5_2:69475437-69475456 | Msa0784800:intron | 30.0% | |
| CTTCAAAAATCATGTCATTC+AGG | - | chr5_2:69475541-69475560 | Msa0784800:intron | 30.0% | |
| CGGAGACATAAAAAATTTCA+TGG | - | chr5_2:69475706-69475725 | Msa0784800:intron | 30.0% | |
| TGTTTGTAGAAAGACATTGA+TGG | - | chr5_2:69475781-69475800 | Msa0784800:intron | 30.0% | |
| AATCCAATTGCTTTCCAATA+AGG | + | chr5_2:69475857-69475876 | None:intergenic | 30.0% | |
| TTATTGGAAAGCAATTGGAT+TGG | - | chr5_2:69475856-69475875 | Msa0784800:intron | 30.0% | |
| TAAATGATCACTTGGATAAG+AGG | - | chr5_2:69476066-69476085 | Msa0784800:intron | 30.0% | |
| TACCTTCATTCCATAACTAT+AGG | - | chr5_2:69476135-69476154 | Msa0784800:intron | 30.0% | |
| ATCCTATAGTTATGGAATGA+AGG | + | chr5_2:69476140-69476159 | None:intergenic | 30.0% | |
| CATTCCATAACTATAGGATT+TGG | - | chr5_2:69476141-69476160 | Msa0784800:intron | 30.0% | |
| AAGACCAAATCCTATAGTTA+TGG | + | chr5_2:69476148-69476167 | None:intergenic | 30.0% | |
| TCAAGACATATGTATTTACC+TGG | + | chr5_2:69476235-69476254 | None:intergenic | 30.0% | |
| ! | ATACCACTCCTACAATTTTA+GGG | + | chr5_2:69476275-69476294 | None:intergenic | 30.0% |
| ! | TATACCACTCCTACAATTTT+AGG | + | chr5_2:69476276-69476295 | None:intergenic | 30.0% |
| TCACATTAGTACATATGAGT+TGG | + | chr5_2:69476396-69476415 | None:intergenic | 30.0% | |
| !!! | ACTGGTTGATATCGTTTTTT+TGG | + | chr5_2:69476511-69476530 | None:intergenic | 30.0% |
| AAAGTTGAATAAGGTTGTAC+CGG | - | chr5_2:69476586-69476605 | Msa0784800:intron | 30.0% | |
| CCACTTCTTCAAACAAAAAA+TGG | + | chr5_2:69476770-69476789 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTGTTTGAAGAAG+TGG | - | chr5_2:69476767-69476786 | Msa0784800:three_prime_UTR | 30.0% |
| !!! | TTTTTTGTTTAGGGTCTGTT+TGG | - | chr5_2:69476811-69476830 | Msa0784800:three_prime_UTR | 30.0% |
| GAAAAAGAATAGAAAGTGAG+AGG | - | chr5_2:69476888-69476907 | Msa0784800:three_prime_UTR | 30.0% | |
| AAAGTGGAATAGAAAGTGAA+AGG | - | chr5_2:69476937-69476956 | Msa0784800:three_prime_UTR | 30.0% | |
| ! | ATGTAATATCAGGGCTATTT+TGG | - | chr5_2:69477209-69477228 | Msa0784800:intron | 30.0% |
| !! | TTGGTCATTTTCCATAAAGT+TGG | - | chr5_2:69477228-69477247 | Msa0784800:intron | 30.0% |
| !! | TTTTTCTTTAAGGGTACGTT+TGG | + | chr5_2:69477421-69477440 | None:intergenic | 30.0% |
| ! | GAACCAAGGTTTTTCTTTAA+GGG | + | chr5_2:69477430-69477449 | None:intergenic | 30.0% |
| ! | TGAACCAAGGTTTTTCTTTA+AGG | + | chr5_2:69477431-69477450 | None:intergenic | 30.0% |
| !! | AAAATGGTTTGGTATTTCAC+TGG | - | chr5_2:69477490-69477509 | Msa0784800:three_prime_UTR | 30.0% |
| ! | GAAAGTATAGAGTATGTTTG+TGG | + | chr5_2:69477518-69477537 | None:intergenic | 30.0% |
| !! | CATTGTTTGCCACTTTAAAA+TGG | - | chr5_2:69478039-69478058 | Msa0784800:intron | 30.0% |
| ! | TGTTTAAGGTATCATCTATG+AGG | - | chr5_2:69478328-69478347 | Msa0784800:intron | 30.0% |
| AATAGAGAAGTTTCCCAATA+AGG | + | chr5_2:69478444-69478463 | None:intergenic | 30.0% | |
| TATTGGGAAACTTCTCTATT+AGG | - | chr5_2:69478444-69478463 | Msa0784800:intron | 30.0% | |
| ATGCATTGTATTACCCTAAA+AGG | + | chr5_2:69478500-69478519 | None:intergenic | 30.0% | |
| GAAAACAATTCCAACACATT+TGG | - | chr5_2:69478556-69478575 | Msa0784800:intron | 30.0% | |
| !!! | GTTACTTTTTCCATCTAATG+AGG | - | chr5_2:69478633-69478652 | Msa0784800:intron | 30.0% |
| ! | TTGGATTTTTGAATCCGAAT+AGG | + | chr5_2:69478670-69478689 | None:intergenic | 30.0% |
| TGTTTGAGTATACACTAACA+TGG | - | chr5_2:69478865-69478884 | Msa0784800:intron | 30.0% | |
| ACCATGTGACTATTATTACA+GGG | - | chr5_2:69478888-69478907 | Msa0784800:intron | 30.0% | |
| !! | GTTAGAAATTTTGATGGGAA+GGG | + | chr5_2:69479142-69479161 | None:intergenic | 30.0% |
| !! | TGTTAGAAATTTTGATGGGA+AGG | + | chr5_2:69479143-69479162 | None:intergenic | 30.0% |
| TCCAAAATGGAAAATACGTA+TGG | + | chr5_2:69479338-69479357 | None:intergenic | 30.0% | |
| ACGTATGTACAATACAATGT+AGG | + | chr5_2:69479406-69479425 | None:intergenic | 30.0% | |
| TGTATTGTACATACGTTTGA+TGG | - | chr5_2:69479410-69479429 | Msa0784800:intron | 30.0% | |
| AAATTGCAGTTTATCACCTT+TGG | - | chr5_2:69479482-69479501 | Msa0784800:intron | 30.0% | |
| !!! | TATTTTTAAGGGCATTAGCA+AGG | - | chr5_2:69479570-69479589 | Msa0784800:intron | 30.0% |
| TAGGAAAAAAGACAAAGATG+TGG | + | chr5_2:69479770-69479789 | None:intergenic | 30.0% | |
| ! | ATAGTGAGATTTTACTCATG+AGG | - | chr5_2:69479805-69479824 | Msa0784800:intron | 30.0% |
| !!! | TCACTATTTTGACATGTTGT+AGG | - | chr5_2:69479839-69479858 | Msa0784800:intron | 30.0% |
| GTATTGTGAAATGCTTTGAT+AGG | - | chr5_2:69479961-69479980 | Msa0784800:intron | 30.0% | |
| !! | CTTTTAGAAGTAGAAGCTTA+TGG | - | chr5_2:69480036-69480055 | Msa0784800:intron | 30.0% |
| CTTCAATTCGACAAAAACAT+GGG | + | chr5_2:69480167-69480186 | None:intergenic | 30.0% | |
| ACTATGAGTTTCTACTTCAA+AGG | - | chr5_2:69480225-69480244 | Msa0784800:intron | 30.0% | |
| CTATGAGTTTCTACTTCAAA+GGG | - | chr5_2:69480226-69480245 | Msa0784800:intron | 30.0% | |
| TATGAGTTTCTACTTCAAAG+GGG | - | chr5_2:69480227-69480246 | Msa0784800:intron | 30.0% | |
| AATTAAATAATTGTCCACCC+TGG | - | chr5_2:69480282-69480301 | Msa0784800:three_prime_UTR | 30.0% | |
| ACCATCAACAAATTTATGGT+GGG | + | chr5_2:69480337-69480356 | None:intergenic | 30.0% | |
| AACCATCAACAAATTTATGG+TGG | + | chr5_2:69480338-69480357 | None:intergenic | 30.0% | |
| !! | ATTTGTTGATGGTTATGGAA+AGG | - | chr5_2:69480344-69480363 | Msa0784800:three_prime_UTR | 30.0% |
| !! | ATTCGTTTGTTGTACTACTA+TGG | + | chr5_2:69480533-69480552 | None:intergenic | 30.0% |
| GAAGTGACTTCCTATATTAA+TGG | - | chr5_2:69480566-69480585 | Msa0784800:three_prime_UTR | 30.0% | |
| ATAACTGAATGACAAAGAAG+TGG | + | chr5_2:69480666-69480685 | None:intergenic | 30.0% | |
| CTATAGTCATATAGTACCAT+TGG | - | chr5_2:69480689-69480708 | Msa0784800:intron | 30.0% | |
| TGTGACTTAAATAGTACCAA+TGG | + | chr5_2:69480708-69480727 | None:intergenic | 30.0% | |
| ! | TTAGGTTGTGTTAAAATGTG+GGG | + | chr5_2:69480733-69480752 | None:intergenic | 30.0% |
| ! | GTTAGGTTGTGTTAAAATGT+GGG | + | chr5_2:69480734-69480753 | None:intergenic | 30.0% |
| ! | TGTTAGGTTGTGTTAAAATG+TGG | + | chr5_2:69480735-69480754 | None:intergenic | 30.0% |
| ACTTCAAACCATAACAATTG+AGG | - | chr5_2:69480891-69480910 | Msa0784800:intron | 30.0% | |
| AACCATAACAATTGAGGTAA+TGG | - | chr5_2:69480897-69480916 | Msa0784800:intron | 30.0% | |
| !! | TATGGTTGATGCCTTTTTAT+AGG | - | chr5_2:69480956-69480975 | Msa0784800:three_prime_UTR | 30.0% |
| !! | TGTCAATCGTAGTTGATTTT+GGG | + | chr5_2:69481035-69481054 | None:intergenic | 30.0% |
| CATTGTTTAGAAAAATCGGA+CGG | + | chr5_2:69481115-69481134 | None:intergenic | 30.0% | |
| ! | TGCCAATATTCGATTTGATT+CGG | - | chr5_2:69481133-69481152 | Msa0784800:intron | 30.0% |
| AACCGAATCAAATCGAATAT+TGG | + | chr5_2:69481138-69481157 | None:intergenic | 30.0% | |
| ! | GTAATATGGGTTACTATTGT+AGG | - | chr5_2:69481266-69481285 | Msa0784800:intron | 30.0% |
| ! | ATCAAACAAGTTGACACATT+TGG | - | chr5_2:69481326-69481345 | Msa0784800:intron | 30.0% |
| TGATTATAGCCAACAAATGT+TGG | - | chr5_2:69481595-69481614 | Msa0784800:intron | 30.0% | |
| GATTATAGCCAACAAATGTT+GGG | - | chr5_2:69481596-69481615 | Msa0784800:intron | 30.0% | |
| GTCACATCAAACTATTGAGT+TGG | + | chr5_2:69474845-69474864 | None:intergenic | 35.0% | |
| AAATTCTTGAAACCAGAAGC+AGG | + | chr5_2:69475015-69475034 | None:intergenic | 35.0% | |
| ! | AAGAATTTTCTTTGGCATGG+TGG | - | chr5_2:69475027-69475046 | Msa0784800:three_prime_UTR | 35.0% |
| TTTAGATTTCGACGCATGTT+TGG | - | chr5_2:69475107-69475126 | Msa0784800:three_prime_UTR | 35.0% | |
| CAGTGAGTTTAACGAAATCA+CGG | + | chr5_2:69475229-69475248 | None:intergenic | 35.0% | |
| ATGATGAGACTGATTGGATA+TGG | + | chr5_2:69475257-69475276 | None:intergenic | 35.0% | |
| TATCCAATCAGTCTCATCAT+TGG | - | chr5_2:69475257-69475276 | Msa0784800:three_prime_UTR | 35.0% | |
| !!! | TCTTTGACTGTGACCTTTTT+TGG | - | chr5_2:69475289-69475308 | Msa0784800:intron | 35.0% |
| !!! | TTTTTGGTTTTGTGCTATGC+AGG | - | chr5_2:69475355-69475374 | Msa0784800:intron | 35.0% |
| ! | CAAGTCTTCTATGGATTGAT+GGG | - | chr5_2:69475446-69475465 | Msa0784800:intron | 35.0% |
| AAAATCATGTCATTCAGGTG+AGG | - | chr5_2:69475546-69475565 | Msa0784800:intron | 35.0% | |
| TGTGATCGGAATTATTGTAG+CGG | - | chr5_2:69475686-69475705 | Msa0784800:intron | 35.0% | |
| TGAAGGACCATATTGAATTG+TGG | - | chr5_2:69475989-69476008 | Msa0784800:intron | 35.0% | |
| ! | AGGACATGGACTTACATTTT+TGG | - | chr5_2:69476086-69476105 | Msa0784800:intron | 35.0% |
| ! | TATAGGATTTGGTCTTTCCT+TGG | - | chr5_2:69476152-69476171 | Msa0784800:intron | 35.0% |
| TCCAAAGTCCCTAAAATTGT+AGG | - | chr5_2:69476264-69476283 | Msa0784800:intron | 35.0% | |
| !! | TCCTACAATTTTAGGGACTT+TGG | + | chr5_2:69476268-69476287 | None:intergenic | 35.0% |
| ATATCAACCAGTTCATCAGT+TGG | - | chr5_2:69476519-69476538 | Msa0784800:intron | 35.0% | |
| GAGTGAGGAAAGATTATATG+AGG | - | chr5_2:69476862-69476881 | Msa0784800:three_prime_UTR | 35.0% | |
| ! | AGAAAGTGAGAGGATTGTTT+TGG | - | chr5_2:69476898-69476917 | Msa0784800:three_prime_UTR | 35.0% |
| !!! | AGAGGATTGTTTTGGTTGTT+TGG | - | chr5_2:69476906-69476925 | Msa0784800:three_prime_UTR | 35.0% |
| AGGGAAATGAACCAACTTTA+TGG | + | chr5_2:69477242-69477261 | None:intergenic | 35.0% | |
| !!! | TGTGGAAAGTTTTTGAGTGT+GGG | - | chr5_2:69477280-69477299 | Msa0784800:intron | 35.0% |
| ! | TACAGTACTTTTCCACTGTT+TGG | + | chr5_2:69477348-69477367 | None:intergenic | 35.0% |
| GTACCCTTAAAGAAAAACCT+TGG | - | chr5_2:69477424-69477443 | Msa0784800:three_prime_UTR | 35.0% | |
| !! | AAACCTTGGTTCATTTTTGC+AGG | - | chr5_2:69477438-69477457 | Msa0784800:three_prime_UTR | 35.0% |
| GGTTGAAAATGTTGTTCACT+CGG | - | chr5_2:69477459-69477478 | Msa0784800:three_prime_UTR | 35.0% | |
| GTTGAAAATGTTGTTCACTC+GGG | - | chr5_2:69477460-69477479 | Msa0784800:three_prime_UTR | 35.0% | |
| AACATACTCTATACTTTCGG+CGG | - | chr5_2:69477520-69477539 | Msa0784800:three_prime_UTR | 35.0% | |
| !! | CTTTTGCCTCCATTTTAATG+AGG | - | chr5_2:69477712-69477731 | Msa0784800:intron | 35.0% |
| AGAAGTCCTCATTAAAATGG+AGG | + | chr5_2:69477721-69477740 | None:intergenic | 35.0% | |
| TACACTATTGTCTTGGCTAA+CGG | - | chr5_2:69477785-69477804 | Msa0784800:intron | 35.0% | |
| AAACAATTGGAAATGCAGGA+TGG | - | chr5_2:69478109-69478128 | Msa0784800:intron | 35.0% | |
| ! | ATGCACTTGGTTCTTGTTTA+AGG | - | chr5_2:69478314-69478333 | Msa0784800:intron | 35.0% |
| GGTATCATCTATGAGGAAAT+TGG | - | chr5_2:69478335-69478354 | Msa0784800:intron | 35.0% | |
| TACACTGTTCTTTGCCTTAT+TGG | - | chr5_2:69478427-69478446 | Msa0784800:intron | 35.0% | |
| ! | ACACTGTTCTTTGCCTTATT+GGG | - | chr5_2:69478428-69478447 | Msa0784800:intron | 35.0% |
| TGTGATATGTCCAAATGTGT+TGG | + | chr5_2:69478569-69478588 | None:intergenic | 35.0% | |
| GACCATGTGACTATTATTAC+AGG | - | chr5_2:69478887-69478906 | Msa0784800:intron | 35.0% | |
| TCCCTGTAATAATAGTCACA+TGG | + | chr5_2:69478892-69478911 | None:intergenic | 35.0% | |
| !! | TAGATAGCTTTGAACTTCTG+AGG | + | chr5_2:69478937-69478956 | None:intergenic | 35.0% |
| ATCTGCAATTGCTGTCTATT+GGG | - | chr5_2:69478996-69479015 | Msa0784800:three_prime_UTR | 35.0% | |
| CATTGGAATGGTCTAAAAGT+TGG | + | chr5_2:69479032-69479051 | None:intergenic | 35.0% | |
| AATATTGATGCTCATTCACC+AGG | - | chr5_2:69479095-69479114 | Msa0784800:intron | 35.0% | |
| GGGTGAGAAATCGAAAAAAT+AGG | + | chr5_2:69479227-69479246 | None:intergenic | 35.0% | |
| ! | GCCATACGTATTTTCCATTT+TGG | - | chr5_2:69479334-69479353 | Msa0784800:intron | 35.0% |
| ! | GGTGTCACACAATTTGATTA+TGG | + | chr5_2:69479385-69479404 | None:intergenic | 35.0% |
| TACACCATTGTACTTTGTGT+GGG | - | chr5_2:69479514-69479533 | Msa0784800:intron | 35.0% | |
| ! | GGTGATACCAATATGGTTTT+TGG | - | chr5_2:69479601-69479620 | Msa0784800:intron | 35.0% |
| GCTATAATCTTCCCTTTCTT+TGG | - | chr5_2:69479623-69479642 | Msa0784800:intron | 35.0% | |
| TGTGAAATGCTTTGATAGGA+CGG | - | chr5_2:69479965-69479984 | Msa0784800:intron | 35.0% | |
| !! | GTACTGGTTTGACTAAAACA+TGG | - | chr5_2:69480097-69480116 | Msa0784800:intron | 35.0% |
| !!! | AGTTTTGAGGCACATATGTT+CGG | + | chr5_2:69480127-69480146 | None:intergenic | 35.0% |
| GCTTCAATTCGACAAAAACA+TGG | + | chr5_2:69480168-69480187 | None:intergenic | 35.0% | |
| TTACGGCTAAGAAAGTGATT+TGG | + | chr5_2:69480194-69480213 | None:intergenic | 35.0% | |
| !! | CAAATTTATGGTGGGTTCTA+CGG | + | chr5_2:69480329-69480348 | None:intergenic | 35.0% |
| !! | ACCCACCATAAATTTGTTGA+TGG | - | chr5_2:69480333-69480352 | Msa0784800:three_prime_UTR | 35.0% |
| ATGGTTATGGAAAGGTTAGA+TGG | - | chr5_2:69480352-69480371 | Msa0784800:three_prime_UTR | 35.0% | |
| TGGTTATGGAAAGGTTAGAT+GGG | - | chr5_2:69480353-69480372 | Msa0784800:three_prime_UTR | 35.0% | |
| CAAACGAATTATATGCTGCT+TGG | - | chr5_2:69480544-69480563 | Msa0784800:three_prime_UTR | 35.0% | |
| !! | ACACTTGAGTTGATAGTGTT+AGG | + | chr5_2:69480751-69480770 | None:intergenic | 35.0% |
| GACCATTACCTCAATTGTTA+TGG | + | chr5_2:69480902-69480921 | None:intergenic | 35.0% | |
| !! | CTGTCAATCGTAGTTGATTT+TGG | + | chr5_2:69481036-69481055 | None:intergenic | 35.0% |
| ATCAACTACGATTGACAGTT+TGG | - | chr5_2:69481038-69481057 | Msa0784800:CDS | 35.0% | |
| GATCATAGTTCAATGTGGTT+CGG | - | chr5_2:69481079-69481098 | Msa0784800:CDS | 35.0% | |
| ACATACATTAATGTCCAGCT+TGG | + | chr5_2:69481230-69481249 | None:intergenic | 35.0% | |
| TCAATGCGTTTGTGGTAATA+TGG | - | chr5_2:69481252-69481271 | Msa0784800:intron | 35.0% | |
| CAATGCGTTTGTGGTAATAT+GGG | - | chr5_2:69481253-69481272 | Msa0784800:intron | 35.0% | |
| !! | ACTATTGTAGGCTTTGGATT+TGG | - | chr5_2:69481278-69481297 | Msa0784800:intron | 35.0% |
| ! | CTTTTCAGTGATGCATTGTA+TGG | + | chr5_2:69481400-69481419 | None:intergenic | 35.0% |
| GTTGGCTATAATCAAGTCTA+TGG | + | chr5_2:69481589-69481608 | None:intergenic | 35.0% | |
| TGAGCTGAATGAAGAAAGAG+AGG | - | chr5_2:69474972-69474991 | Msa0784800:three_prime_UTR | 40.0% | |
| GAAGAAAGAGAGGAAGAGAA+AGG | - | chr5_2:69474982-69475001 | Msa0784800:three_prime_UTR | 40.0% | |
| ! | GTGGTTCTGTTTATGATGCT+TGG | - | chr5_2:69475046-69475065 | Msa0784800:three_prime_UTR | 40.0% |
| GTTCCAATGATGAGACTGAT+TGG | + | chr5_2:69475263-69475282 | None:intergenic | 40.0% | |
| TCTCTTCCACACACCAAAAA+AGG | + | chr5_2:69475305-69475324 | None:intergenic | 40.0% | |
| TCTCAGCTAGGAATGATTTC+AGG | - | chr5_2:69475413-69475432 | Msa0784800:intron | 40.0% | |
| CCATCAATCCATAGAAGACT+TGG | + | chr5_2:69475448-69475467 | None:intergenic | 40.0% | |
| ! | CCAAGTCTTCTATGGATTGA+TGG | - | chr5_2:69475445-69475464 | Msa0784800:intron | 40.0% |
| ! | TCTATGGATTGATGGGTAGT+TGG | - | chr5_2:69475453-69475472 | Msa0784800:intron | 40.0% |
| TGTTGAGTACAGAAGCAGAA+AGG | - | chr5_2:69475502-69475521 | Msa0784800:intron | 40.0% | |
| TACGGTCAAATCGATGTGAT+CGG | - | chr5_2:69475672-69475691 | Msa0784800:intron | 40.0% | |
| ! | TGTGAAGTGGTTTGAAGTGT+TGG | - | chr5_2:69475817-69475836 | Msa0784800:intron | 40.0% |
| !! | AAGTGGTTTGAAGTGTTGGA+GGG | - | chr5_2:69475821-69475840 | Msa0784800:intron | 40.0% |
| GGTCCTTATTGGAAAGCAAT+TGG | - | chr5_2:69475851-69475870 | Msa0784800:intron | 40.0% | |
| AACTGCACTTTCCTTCTCTT+TGG | - | chr5_2:69475884-69475903 | Msa0784800:intron | 40.0% | |
| GGATAACAGATCCAAAGAGA+AGG | + | chr5_2:69475898-69475917 | None:intergenic | 40.0% | |
| ATCACTTGGATAAGAGGACA+TGG | - | chr5_2:69476072-69476091 | Msa0784800:intron | 40.0% | |
| ATTTACCTGGCCATGAACAA+TGG | + | chr5_2:69476222-69476241 | None:intergenic | 40.0% | |
| AGTCCCTAAAATTGTAGGAG+TGG | - | chr5_2:69476269-69476288 | Msa0784800:intron | 40.0% | |
| TGCACGATTATATTGTAGCG+TGG | - | chr5_2:69476546-69476565 | Msa0784800:intron | 40.0% | |
| ! | TTCGGGTCGGTTCATTTATT+CGG | - | chr5_2:69476659-69476678 | Msa0784800:intron | 40.0% |
| !! | AGTATGAGACTTTTGGGTCA+TGG | + | chr5_2:69476724-69476743 | None:intergenic | 40.0% |
| GGATGCTCAAAGAAAGTGAA+AGG | - | chr5_2:69476832-69476851 | Msa0784800:three_prime_UTR | 40.0% | |
| GTGAAAGGAAAGAAAGAGTG+AGG | - | chr5_2:69476847-69476866 | Msa0784800:three_prime_UTR | 40.0% | |
| AAAAACTTTCCACAGCTGCA+AGG | + | chr5_2:69477274-69477293 | None:intergenic | 40.0% | |
| !!! | CTGTGGAAAGTTTTTGAGTG+TGG | - | chr5_2:69477279-69477298 | Msa0784800:intron | 40.0% |
| !!! | GGGAAAGAAAGTTTTGAGGT+GGG | + | chr5_2:69477307-69477326 | None:intergenic | 40.0% |
| !!! | AGGGAAAGAAAGTTTTGAGG+TGG | + | chr5_2:69477308-69477327 | None:intergenic | 40.0% |
| ! | GGTAGGGAAAGAAAGTTTTG+AGG | + | chr5_2:69477311-69477330 | None:intergenic | 40.0% |
| TGTTTGGCAGGACAAAGAAA+GGG | + | chr5_2:69477332-69477351 | None:intergenic | 40.0% | |
| GGAAACAGAAGGGAAAGAAA+GGG | + | chr5_2:69477392-69477411 | None:intergenic | 40.0% | |
| TGGAAACAGAAGGGAAAGAA+AGG | + | chr5_2:69477393-69477412 | None:intergenic | 40.0% | |
| TTCTTTCCCTTCTGTTTCCA+TGG | - | chr5_2:69477393-69477412 | Msa0784800:three_prime_UTR | 40.0% | |
| TTGGATCCATGGAAACAGAA+GGG | + | chr5_2:69477402-69477421 | None:intergenic | 40.0% | |
| TTTGGATCCATGGAAACAGA+AGG | + | chr5_2:69477403-69477422 | None:intergenic | 40.0% | |
| CAACCTGCAAAAATGAACCA+AGG | + | chr5_2:69477444-69477463 | None:intergenic | 40.0% | |
| ACATACTCTATACTTTCGGC+GGG | - | chr5_2:69477521-69477540 | Msa0784800:three_prime_UTR | 40.0% | |
| AGCCAAGACAATAGTGTAGT+GGG | + | chr5_2:69477783-69477802 | None:intergenic | 40.0% | |
| TAGCCAAGACAATAGTGTAG+TGG | + | chr5_2:69477784-69477803 | None:intergenic | 40.0% | |
| TGAGGTAAAATGTCTCTTGG+GGG | + | chr5_2:69477889-69477908 | None:intergenic | 40.0% | |
| GTGAGGTAAAATGTCTCTTG+GGG | + | chr5_2:69477890-69477909 | None:intergenic | 40.0% | |
| CGTGAGGTAAAATGTCTCTT+GGG | + | chr5_2:69477891-69477910 | None:intergenic | 40.0% | |
| TCGTGAGGTAAAATGTCTCT+TGG | + | chr5_2:69477892-69477911 | None:intergenic | 40.0% | |
| ! | AGACATTTTACCTCACGATG+TGG | - | chr5_2:69477894-69477913 | Msa0784800:intron | 40.0% |
| ! | GACATTTTACCTCACGATGT+GGG | - | chr5_2:69477895-69477914 | Msa0784800:intron | 40.0% |
| AAATTAGTACCCACATCGTG+AGG | + | chr5_2:69477907-69477926 | None:intergenic | 40.0% | |
| CGTACAAGAACCTCATTAGA+TGG | + | chr5_2:69478646-69478665 | None:intergenic | 40.0% | |
| AGGTTCTTGTACGTCCTATT+CGG | - | chr5_2:69478653-69478672 | Msa0784800:intron | 40.0% | |
| CAATAGACAGCAATTGCAGA+TGG | + | chr5_2:69478997-69479016 | None:intergenic | 40.0% | |
| CATCTGCAATTGCTGTCTAT+TGG | - | chr5_2:69478995-69479014 | Msa0784800:three_prime_UTR | 40.0% | |
| ! | GTCTAAAAGTTGGTCACCAA+AGG | + | chr5_2:69479022-69479041 | None:intergenic | 40.0% |
| !! | GAAGAGAGAAAGCATTGGAA+TGG | + | chr5_2:69479044-69479063 | None:intergenic | 40.0% |
| ! | AGGAAGAAGAGAGAAAGCAT+TGG | + | chr5_2:69479049-69479068 | None:intergenic | 40.0% |
| TTCTCTCTTCTTCCTCGTAA+TGG | - | chr5_2:69479054-69479073 | Msa0784800:intron | 40.0% | |
| TGGTGTACAAGCAAATCCAA+AGG | + | chr5_2:69479501-69479520 | None:intergenic | 40.0% | |
| GTACACCATTGTACTTTGTG+TGG | - | chr5_2:69479513-69479532 | Msa0784800:intron | 40.0% | |
| TTCTCCCACACAAAGTACAA+TGG | + | chr5_2:69479521-69479540 | None:intergenic | 40.0% | |
| TTTGTGTGGGAGAAAGTGAT+AGG | - | chr5_2:69479527-69479546 | Msa0784800:intron | 40.0% | |
| TACCTGTGGTGATACCAATA+TGG | - | chr5_2:69479594-69479613 | Msa0784800:intron | 40.0% | |
| AACCATATTGGTATCACCAC+AGG | + | chr5_2:69479599-69479618 | None:intergenic | 40.0% | |
| AGTTAATGGGGCCAAAGAAA+GGG | + | chr5_2:69479637-69479656 | None:intergenic | 40.0% | |
| CTGCTCATATGCTCACTTAT+AGG | - | chr5_2:69479708-69479727 | Msa0784800:intron | 40.0% | |
| AGACAAAGATGTGGAGAGAT+TGG | + | chr5_2:69479761-69479780 | None:intergenic | 40.0% | |
| GACATGTTGTAGGTCCAATT+TGG | - | chr5_2:69479849-69479868 | Msa0784800:intron | 40.0% | |
| !! | CAATCACGAGTTGAGTTTTG+AGG | + | chr5_2:69480140-69480159 | None:intergenic | 40.0% |
| !! | GGCTAAGAAAGTGATTTGGT+CGG | + | chr5_2:69480190-69480209 | None:intergenic | 40.0% |
| CCATATTGATAGGTAGTCCA+GGG | + | chr5_2:69480302-69480321 | None:intergenic | 40.0% | |
| ACCATATTGATAGGTAGTCC+AGG | + | chr5_2:69480303-69480322 | None:intergenic | 40.0% | |
| CTACGGTGTACCATATTGAT+AGG | + | chr5_2:69480312-69480331 | None:intergenic | 40.0% | |
| ! | TGATCACTGAGTACTGTGTA+AGG | + | chr5_2:69480774-69480793 | None:intergenic | 40.0% |
| TATGATCGCTAGTGCACAAA+CGG | + | chr5_2:69481066-69481085 | None:intergenic | 40.0% | |
| CTAGCGATCATAGTTCAATG+TGG | - | chr5_2:69481074-69481093 | Msa0784800:CDS | 40.0% | |
| !! | TAGTTCAATGTGGTTCGGTT+TGG | - | chr5_2:69481084-69481103 | Msa0784800:CDS | 40.0% |
| GTCCAGCTTGGAATAACTTT+GGG | + | chr5_2:69481218-69481237 | None:intergenic | 40.0% | |
| TGTCCAGCTTGGAATAACTT+TGG | + | chr5_2:69481219-69481238 | None:intergenic | 40.0% | |
| GTATGTGATCAATGCGTTTG+TGG | - | chr5_2:69481244-69481263 | Msa0784800:intron | 40.0% | |
| TGGGTTACTATTGTAGGCTT+TGG | - | chr5_2:69481272-69481291 | Msa0784800:intron | 40.0% | |
| !! | ATTGTAGGCTTTGGATTTGG+AGG | - | chr5_2:69481281-69481300 | Msa0784800:intron | 40.0% |
| !! | TTGTAGGCTTTGGATTTGGA+GGG | - | chr5_2:69481282-69481301 | Msa0784800:intron | 40.0% |
| TCAGTGATGCATTGTATGGT+TGG | + | chr5_2:69481396-69481415 | None:intergenic | 40.0% | |
| CAATGCATCACTGAAAAGTG+AGG | - | chr5_2:69481402-69481421 | Msa0784800:intron | 40.0% | |
| AAAGATTGCCTTGCTACACA+AGG | + | chr5_2:69481525-69481544 | None:intergenic | 40.0% | |
| TAGCCAACAAATGTTGGGTT+TGG | - | chr5_2:69481601-69481620 | Msa0784800:intron | 40.0% | |
| TCACCAAACCCAACATTTGT+TGG | + | chr5_2:69481607-69481626 | None:intergenic | 40.0% | |
| !! | CAAATGTTGGGTTTGGTGAT+TGG | - | chr5_2:69481608-69481627 | Msa0784800:intron | 40.0% |
| !! | TGGGTTTGGTGATTGGTAAT+TGG | - | chr5_2:69481615-69481634 | Msa0784800:intron | 40.0% |
| GAAAGAGAGGAAGAGAAAGG+AGG | - | chr5_2:69474985-69475004 | Msa0784800:three_prime_UTR | 45.0% | |
| GTTTAGCTGTGCCTCAAATC+AGG | - | chr5_2:69475068-69475087 | Msa0784800:three_prime_UTR | 45.0% | |
| GGATTCACAGTGAAATCAGC+AGG | - | chr5_2:69475128-69475147 | Msa0784800:three_prime_UTR | 45.0% | |
| CAGTGAAATCAGCAGGATCA+CGG | - | chr5_2:69475135-69475154 | Msa0784800:three_prime_UTR | 45.0% | |
| !!! | CTGTGACCTTTTTTGGTGTG+TGG | - | chr5_2:69475296-69475315 | Msa0784800:intron | 45.0% |
| CCTAGCTGAGAGAATGAGTA+TGG | + | chr5_2:69475404-69475423 | None:intergenic | 45.0% | |
| CCATACTCATTCTCTCAGCT+AGG | - | chr5_2:69475401-69475420 | Msa0784800:intron | 45.0% | |
| !! | GAAGTGGTTTGAAGTGTTGG+AGG | - | chr5_2:69475820-69475839 | Msa0784800:intron | 45.0% |
| ! | AGGGTTTGCTTGGTCCTTAT+TGG | - | chr5_2:69475840-69475859 | Msa0784800:intron | 45.0% |
| ! | ATTTGGTCTTTCCTTGGCCT+TGG | - | chr5_2:69476158-69476177 | Msa0784800:intron | 45.0% |
| CTGTGTATGTAGTCATGCCA+AGG | + | chr5_2:69476178-69476197 | None:intergenic | 45.0% | |
| GCATGACTACATACACAGCT+TGG | - | chr5_2:69476180-69476199 | Msa0784800:intron | 45.0% | |
| ACCATTGCAGCCATTGTTCA+TGG | - | chr5_2:69476209-69476228 | Msa0784800:intron | 45.0% | |
| TAGACCGAGTGCGATTCAAT+CGG | - | chr5_2:69476480-69476499 | Msa0784800:intron | 45.0% | |
| TCAACCGATTGAATCGCACT+CGG | + | chr5_2:69476487-69476506 | None:intergenic | 45.0% | |
| GCACAAACCAACTGATGAAC+TGG | + | chr5_2:69476529-69476548 | None:intergenic | 45.0% | |
| ! | GTCGGTTCATTTATTCGGCT+CGG | - | chr5_2:69476664-69476683 | Msa0784800:intron | 45.0% |
| CTGTTTGGCAGGACAAAGAA+AGG | + | chr5_2:69477333-69477352 | None:intergenic | 45.0% | |
| TTCTTTGTCCTGCCAAACAG+TGG | - | chr5_2:69477333-69477352 | Msa0784800:intron | 45.0% | |
| ! | GTACTTTTCCACTGTTTGGC+AGG | + | chr5_2:69477344-69477363 | None:intergenic | 45.0% |
| GGGTATGGAAAGAAAGTGAG+TGG | + | chr5_2:69477372-69477391 | None:intergenic | 45.0% | |
| CAGAAGGGAAAGAAAGGGTA+TGG | + | chr5_2:69477387-69477406 | None:intergenic | 45.0% | |
| ! | TAAGGGTACGTTTGGATCCA+TGG | + | chr5_2:69477413-69477432 | None:intergenic | 45.0% |
| CACCCACTACACTATTGTCT+TGG | - | chr5_2:69477778-69477797 | Msa0784800:intron | 45.0% | |
| GTAAAATGTCTCTTGGGGGA+AGG | + | chr5_2:69477885-69477904 | None:intergenic | 45.0% | |
| AGGAAATTGGACAGCTCAGA+TGG | - | chr5_2:69478348-69478367 | Msa0784800:intron | 45.0% | |
| AGCTCAGATGGTTCATGCAT+GGG | - | chr5_2:69478360-69478379 | Msa0784800:intron | 45.0% | |
| GGGAAATCATGCATGCAATG+TGG | - | chr5_2:69478908-69478927 | Msa0784800:intron | 45.0% | |
| GACAGCAATTGCAGATGGTA+GGG | + | chr5_2:69478992-69479011 | None:intergenic | 45.0% | |
| AGACAGCAATTGCAGATGGT+AGG | + | chr5_2:69478993-69479012 | None:intergenic | 45.0% | |
| ATTGCTGTCTATTGGGCCTT+TGG | - | chr5_2:69479003-69479022 | Msa0784800:intron | 45.0% | |
| GAGTTAATGGGGCCAAAGAA+AGG | + | chr5_2:69479638-69479657 | None:intergenic | 45.0% | |
| TGAGCATATGAGCAGAAGCA+GGG | + | chr5_2:69479703-69479722 | None:intergenic | 45.0% | |
| GAAATGCTTTGATAGGACGG+TGG | - | chr5_2:69479968-69479987 | Msa0784800:intron | 45.0% | |
| TATGGTCCTTCTTGTCCTCA+CGG | - | chr5_2:69480054-69480073 | Msa0784800:intron | 45.0% | |
| CTTTCTTAGCCGTAAAGACG+AGG | - | chr5_2:69480199-69480218 | Msa0784800:intron | 45.0% | |
| CATAGTCCTCCTCGTCTTTA+CGG | + | chr5_2:69480211-69480230 | None:intergenic | 45.0% | |
| TATTGATAGGTAGTCCAGGG+TGG | + | chr5_2:69480299-69480318 | None:intergenic | 45.0% | |
| CCCTGGACTACCTATCAATA+TGG | - | chr5_2:69480299-69480318 | Msa0784800:three_prime_UTR | 45.0% | |
| TGCCCAAAGTTATTCCAAGC+TGG | - | chr5_2:69481213-69481232 | Msa0784800:intron | 45.0% | |
| !!! | CTGGTAGTTTTGGTGGACAT+TGG | + | chr5_2:69481370-69481389 | None:intergenic | 45.0% |
| !!! | TTGGAAGCTGGTAGTTTTGG+TGG | + | chr5_2:69481377-69481396 | None:intergenic | 45.0% |
| ! | TGGTTGGAAGCTGGTAGTTT+TGG | + | chr5_2:69481380-69481399 | None:intergenic | 45.0% |
| TGCATTGTATGGTTGGAAGC+TGG | + | chr5_2:69481389-69481408 | None:intergenic | 45.0% | |
| !!! | ATATATTTTTTCTTATATTT+GGG | + | chr5_2:69475580-69475599 | None:intergenic | 5.0% |
| !!! | TATATATTTTTTCTTATATT+TGG | + | chr5_2:69475581-69475600 | None:intergenic | 5.0% |
| !!! | TTTTAACATAATATTTAAAA+TGG | + | chr5_2:69476432-69476451 | None:intergenic | 5.0% |
| AAAGGAGGAAGTCCTGCTTC+TGG | - | chr5_2:69475000-69475019 | Msa0784800:three_prime_UTR | 50.0% | |
| TTGTGCTATGCAGGTTGCTC+AGG | - | chr5_2:69475364-69475383 | Msa0784800:intron | 50.0% | |
| !! | GAAGTGTTGGAGGGTTTGCT+TGG | - | chr5_2:69475830-69475849 | Msa0784800:intron | 50.0% |
| ! | TCCAGCTCATAGCTTGTGCA+AGG | - | chr5_2:69475915-69475934 | Msa0784800:intron | 50.0% |
| ACCTTGCACAAGCTATGAGC+TGG | + | chr5_2:69475919-69475938 | None:intergenic | 50.0% | |
| ATGTAGTCATGCCAAGGCCA+AGG | + | chr5_2:69476172-69476191 | None:intergenic | 50.0% | |
| GCCATGAACAATGGCTGCAA+TGG | + | chr5_2:69476213-69476232 | None:intergenic | 50.0% | |
| AGCTGCAAGGACGGAAACAA+GGG | + | chr5_2:69477261-69477280 | None:intergenic | 50.0% | |
| ACTTTCCACAGCTGCAAGGA+CGG | + | chr5_2:69477270-69477289 | None:intergenic | 50.0% | |
| GGCAGGACAAAGAAAGGGTA+GGG | + | chr5_2:69477327-69477346 | None:intergenic | 50.0% | |
| TGGCAGGACAAAGAAAGGGT+AGG | + | chr5_2:69477328-69477347 | None:intergenic | 50.0% | |
| TCACTCGGGCCCAAAGAAAA+TGG | - | chr5_2:69477474-69477493 | Msa0784800:three_prime_UTR | 50.0% | |
| CGGGCCCAAAGAAAATGGTT+TGG | - | chr5_2:69477479-69477498 | Msa0784800:three_prime_UTR | 50.0% | |
| CAGCTCAGATGGTTCATGCA+TGG | - | chr5_2:69478359-69478378 | Msa0784800:intron | 50.0% | |
| ATGGTTCATGCATGGGACCA+TGG | - | chr5_2:69478367-69478386 | Msa0784800:intron | 50.0% | |
| CTCTTCTTCCTCGTAATGGC+TGG | - | chr5_2:69479058-69479077 | Msa0784800:intron | 50.0% | |
| GGCATTAGCAAGGTTACCTG+TGG | - | chr5_2:69479580-69479599 | Msa0784800:intron | 50.0% | |
| GCCCCATTAACTCAGCTGTA+GGG | - | chr5_2:69479645-69479664 | Msa0784800:intron | 50.0% | |
| CCCCTACAGCTGAGTTAATG+GGG | + | chr5_2:69479649-69479668 | None:intergenic | 50.0% | |
| CCCCATTAACTCAGCTGTAG+GGG | - | chr5_2:69479646-69479665 | Msa0784800:intron | 50.0% | |
| GCCCCTACAGCTGAGTTAAT+GGG | + | chr5_2:69479650-69479669 | None:intergenic | 50.0% | |
| AGCCCCTACAGCTGAGTTAA+TGG | + | chr5_2:69479651-69479670 | None:intergenic | 50.0% | |
| GTGAGCATATGAGCAGAAGC+AGG | + | chr5_2:69479704-69479723 | None:intergenic | 50.0% | |
| TAGGTCTGCTTCAGCAAGAC+AGG | - | chr5_2:69479727-69479746 | Msa0784800:intron | 50.0% | |
| TCTCAACCGTGAGGACAAGA+AGG | + | chr5_2:69480063-69480082 | None:intergenic | 50.0% | |
| TCTTGTCCTCACGGTTGAGA+CGG | - | chr5_2:69480063-69480082 | Msa0784800:intron | 50.0% | |
| GACGGTGACTTGATCAGTAC+TGG | - | chr5_2:69480081-69480100 | Msa0784800:intron | 50.0% | |
| TCTTAGCCGTAAAGACGAGG+AGG | - | chr5_2:69480202-69480221 | Msa0784800:intron | 50.0% | |
| !! | TAGGCTTTGGATTTGGAGGG+TGG | - | chr5_2:69481285-69481304 | Msa0784800:intron | 50.0% |
| !! | AGGCTTTGGATTTGGAGGGT+GGG | - | chr5_2:69481286-69481305 | Msa0784800:intron | 50.0% |
| CTGGTGTTCCTTGTGTAGCA+AGG | - | chr5_2:69481514-69481533 | Msa0784800:CDS | 50.0% | |
| TGCAGCCATTGTTCATGGCC+AGG | - | chr5_2:69476214-69476233 | Msa0784800:intron | 55.0% | |
| CAGCTGCAAGGACGGAAACA+AGG | + | chr5_2:69477262-69477281 | None:intergenic | 55.0% | |
| TGTTTCCGTCCTTGCAGCTG+TGG | - | chr5_2:69477262-69477281 | Msa0784800:intron | 55.0% | |
| GGCCCCATTAACTCAGCTGT+AGG | - | chr5_2:69479644-69479663 | Msa0784800:intron | 55.0% | |
| ! | CTCAGCTGTAGGGGCTCTTT+TGG | - | chr5_2:69479655-69479674 | Msa0784800:intron | 55.0% |
| AAGTCACCGTCTCAACCGTG+AGG | + | chr5_2:69480072-69480091 | None:intergenic | 55.0% | |
| GCATCACGCCAGCCATTACG+AGG | + | chr5_2:69479069-69479088 | None:intergenic | 60.0% | |
| CGTAATGGCTGGCGTGATGC+TGG | - | chr5_2:69479069-69479088 | Msa0784800:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 69474758 | 69481722 | 69474758 | ID=Msa0784800;Name=Msa0784800 |
| chr5_2 | mRNA | 69474758 | 69481722 | 69474758 | ID=Msa0784800-mRNA-1;Parent=Msa0784800;Name=Msa0784800-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.75|0.77|0.88|0.87|1|9|1478|77 |
| chr5_2 | exon | 69474758 | 69475283 | 69474758 | ID=Msa0784800-mRNA-1:exon:20908;Parent=Msa0784800-mRNA-1 |
| chr5_2 | exon | 69476732 | 69476989 | 69476732 | ID=Msa0784800-mRNA-1:exon:20907;Parent=Msa0784800-mRNA-1 |
| chr5_2 | exon | 69477364 | 69477571 | 69477364 | ID=Msa0784800-mRNA-1:exon:20906;Parent=Msa0784800-mRNA-1 |
| chr5_2 | exon | 69478923 | 69479020 | 69478923 | ID=Msa0784800-mRNA-1:exon:20905;Parent=Msa0784800-mRNA-1 |
| chr5_2 | exon | 69480245 | 69480428 | 69480245 | ID=Msa0784800-mRNA-1:exon:20904;Parent=Msa0784800-mRNA-1 |
| chr5_2 | exon | 69480544 | 69480656 | 69480544 | ID=Msa0784800-mRNA-1:exon:20903;Parent=Msa0784800-mRNA-1 |
| chr5_2 | exon | 69480918 | 69481103 | 69480918 | ID=Msa0784800-mRNA-1:exon:20902;Parent=Msa0784800-mRNA-1 |
| chr5_2 | exon | 69481435 | 69481569 | 69481435 | ID=Msa0784800-mRNA-1:exon:20901;Parent=Msa0784800-mRNA-1 |
| chr5_2 | exon | 69481719 | 69481722 | 69481719 | ID=Msa0784800-mRNA-1:exon:20900;Parent=Msa0784800-mRNA-1 |
| chr5_2 | CDS | 69481719 | 69481722 | 69481719 | ID=Msa0784800-mRNA-1:cds;Parent=Msa0784800-mRNA-1 |
| chr5_2 | CDS | 69481435 | 69481569 | 69481435 | ID=Msa0784800-mRNA-1:cds;Parent=Msa0784800-mRNA-1 |
| chr5_2 | CDS | 69481009 | 69481103 | 69481009 | ID=Msa0784800-mRNA-1:cds;Parent=Msa0784800-mRNA-1 |
| chr5_2 | three_prime_UTR | 69480918 | 69481008 | 69480918 | ID=Msa0784800-mRNA-1:three_prime_utr;Parent=Msa0784800-mRNA-1 |
| chr5_2 | three_prime_UTR | 69480544 | 69480656 | 69480544 | ID=Msa0784800-mRNA-1:three_prime_utr;Parent=Msa0784800-mRNA-1 |
| chr5_2 | three_prime_UTR | 69480245 | 69480428 | 69480245 | ID=Msa0784800-mRNA-1:three_prime_utr;Parent=Msa0784800-mRNA-1 |
| chr5_2 | three_prime_UTR | 69478923 | 69479020 | 69478923 | ID=Msa0784800-mRNA-1:three_prime_utr;Parent=Msa0784800-mRNA-1 |
| chr5_2 | three_prime_UTR | 69477364 | 69477571 | 69477364 | ID=Msa0784800-mRNA-1:three_prime_utr;Parent=Msa0784800-mRNA-1 |
| chr5_2 | three_prime_UTR | 69476732 | 69476989 | 69476732 | ID=Msa0784800-mRNA-1:three_prime_utr;Parent=Msa0784800-mRNA-1 |
| chr5_2 | three_prime_UTR | 69474758 | 69475283 | 69474758 | ID=Msa0784800-mRNA-1:three_prime_utr;Parent=Msa0784800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
