AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0794570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0794570 MtrunA17_Chr5g0396151 99.115 113 1 0 1 113 1 113 6.29e-82 234
Msa0794570 MtrunA17_Chr7g0249831 89.381 113 12 0 1 113 1 113 6.41e-75 217
Msa0794570 MtrunA17_Chr7g0249821 70.370 108 31 1 1 108 1 107 3.50e-52 159
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0794570 AT4G10040.1 91.071 112 10 0 1 112 1 112 1.86e-75 219
Msa0794570 AT1G22840.1 88.393 112 13 0 1 112 1 112 9.19e-73 212
Msa0794570 AT1G22840.2 84.524 84 13 0 1 84 1 84 2.15e-50 155

Find 64 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATTCTTATTTGGTTAAT+TGG 0.120545 5_3:+6443277 Msa0794570:three_prime_UTR
CCACGTGAACGTAAAATATT+AGG 0.143642 5_3:+6440989 Msa0794570:five_prime_UTR
TTGATTGAGCAACCAATATT+TGG 0.238749 5_3:-6443234 None:intergenic
TTACGAAGCGAATGAAAATT+TGG 0.257214 5_3:-6441074 None:intergenic
GAGTTGGAAACATTCTTATT+TGG 0.269770 5_3:+6443269 Msa0794570:three_prime_UTR
CCCAATCTGAATGGTTTGTT+TGG 0.305862 5_3:+6442286 Msa0794570:CDS
AGAAGTTTGCACTGTATCTT+TGG 0.306075 5_3:+6443143 Msa0794570:three_prime_UTR
AAAATGAATGAATGAATGTT+TGG 0.338492 5_3:-6441100 None:intergenic
AATAAGATCAGCACGTTCTT+GGG 0.344346 5_3:-6443011 None:intergenic
CAATAAGATCAGCACGTTCT+TGG 0.348957 5_3:-6443012 None:intergenic
ACAAGAACATGGCTGTGAAT+TGG 0.349587 5_3:+6442353 Msa0794570:CDS
TTATTTGCTTAACCCCAAAA+AGG 0.352975 5_3:+6442396 Msa0794570:CDS
CAAGAACATGGCTGTGAATT+GGG 0.354427 5_3:+6442354 Msa0794570:CDS
AGCTGCCGAGTAGGAATATC+CGG 0.375428 5_3:-6442329 None:intergenic
GGTTTGTTTGGAAGGCAATC+AGG 0.375977 5_3:+6442298 Msa0794570:CDS
GCTCTTGTGCAGTATATTCC+AGG 0.394249 5_3:+6442956 Msa0794570:intron
GGTGTGACACTGAGCGCATT+TGG 0.415295 5_3:-6441213 None:intergenic
TTCTTGGGGTTTCTTTAGAC+CGG 0.417289 5_3:-6442996 None:intergenic
ATCTCCGGATTTGGCATCAC+CGG 0.423980 5_3:-6441177 None:intergenic
TCCAAACAAACCATTCAGAT+TGG 0.424075 5_3:-6442287 None:intergenic
GAGTATTTATATAGAATAGA+AGG 0.433619 5_3:-6441043 None:intergenic
GCATACTTTAATTATTTGCT+TGG 0.436437 5_3:+6443302 Msa0794570:three_prime_UTR
CACGTGAACGTAAAATATTA+GGG 0.436771 5_3:+6440990 Msa0794570:five_prime_UTR
AAATGAATGAATGAATGTTT+GGG 0.441123 5_3:-6441099 None:intergenic
ATCTGAATGGTTTGTTTGGA+AGG 0.441498 5_3:+6442290 Msa0794570:CDS
TCAGTGTCACACCGTCGATA+AGG 0.441684 5_3:+6441223 Msa0794570:CDS
GCAAATAAAGTAGGCTACAT+TGG 0.452206 5_3:+6443165 Msa0794570:three_prime_UTR
CAGTGTCACACCGTCGATAA+GGG 0.454494 5_3:+6441224 Msa0794570:CDS
TGCTTAGCTCAATAAGTACT+AGG 0.471021 5_3:+6443372 Msa0794570:three_prime_UTR
GGGACCAAGATGGTATTTCC+CGG 0.471291 5_3:+6442977 Msa0794570:CDS
TCAAATTATCTATGAAGAGT+TGG 0.473907 5_3:+6443253 Msa0794570:three_prime_UTR
CCTCCCGGTGATGCCAAATC+CGG 0.475381 5_3:+6441173 Msa0794570:CDS
CCAAACAAACCATTCAGATT+GGG 0.484079 5_3:-6442286 None:intergenic
CCAATCAATTCATTCATCAA+TGG 0.486180 5_3:+6441133 Msa0794570:exon
CCATTGATGAATGAATTGAT+TGG 0.498079 5_3:-6441133 None:intergenic
GATCTAACCTTGTTTGTGAC+CGG 0.503624 5_3:-6441249 None:intergenic
AGGCAATCAGGCACTACTCC+CGG 0.508362 5_3:+6442310 Msa0794570:CDS
CGAAGCGAATGAAAATTTGG+AGG 0.517703 5_3:-6441071 None:intergenic
GTATCTTTGGCAAATAAAGT+AGG 0.523100 5_3:+6443156 Msa0794570:three_prime_UTR
GGAAATACCATCTTGGTCCC+TGG 0.530773 5_3:-6442974 None:intergenic
AGCTCAATAAGTACTAGGAC+GGG 0.535789 5_3:+6443377 Msa0794570:three_prime_UTR
TAGACCGGGAAATACCATCT+TGG 0.536477 5_3:-6442981 None:intergenic
ATCTCAGGACCCAATCTGAA+TGG 0.539851 5_3:+6442277 Msa0794570:intron
TCTCCGGATTTGGCATCACC+GGG 0.561033 5_3:-6441176 None:intergenic
CTCTTGTGCAGTATATTCCA+GGG 0.564315 5_3:+6442957 Msa0794570:intron
TCGTTTGAACAAGCACCTCC+CGG 0.572771 5_3:+6441158 Msa0794570:CDS
GTTCTTGTTAGCTGCCGAGT+AGG 0.576933 5_3:-6442338 None:intergenic
TCTTGGGGTTTCTTTAGACC+GGG 0.586837 5_3:-6442995 None:intergenic
AAGGGTGCCGGTCACAAACA+AGG 0.600344 5_3:+6441242 Msa0794570:CDS
CTCGGCAGCTAACAAGAACA+TGG 0.601333 5_3:+6442342 Msa0794570:CDS
TCAATAGTAGCGTTAGCTTG+AGG 0.601364 5_3:-6440951 None:intergenic
ATAAGATCAGCACGTTCTTG+GGG 0.603518 5_3:-6443010 None:intergenic
TAGCTCAATAAGTACTAGGA+CGG 0.616217 5_3:+6443376 Msa0794570:three_prime_UTR
TGATCTTATTGCATATCTGA+AGG 0.616592 5_3:+6443024 Msa0794570:CDS
CACACCGTCGATAAGGGTGC+CGG 0.624319 5_3:+6441230 Msa0794570:CDS
TACTCCCGGATATTCCTACT+CGG 0.628766 5_3:+6442324 Msa0794570:CDS
AATATATAATCACTGTGCAG+TGG 0.632456 5_3:-6443050 None:intergenic
GTGACCGGCACCCTTATCGA+CGG 0.634194 5_3:-6441234 None:intergenic
GCTGCCGAGTAGGAATATCC+GGG 0.639197 5_3:-6442328 None:intergenic
GTATATTCCAGGGACCAAGA+TGG 0.661039 5_3:+6442967 Msa0794570:intron
GAACATGGCTGTGAATTGGG+AGG 0.673762 5_3:+6442357 Msa0794570:CDS
TAGAAGGCGTGTGTGTGCCA+CGG 0.683521 5_3:-6441027 None:intergenic
CCGGATTTGGCATCACCGGG+AGG 0.684893 5_3:-6441173 None:intergenic
GGGCTGCGTTAGAAACACCG+TGG 0.799711 5_3:+6441010 Msa0794570:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATACTAATATAATATCAA+GGG - chr5_3:6442100-6442119 None:intergenic 10.0%
!!! ATTTGTGTTTATTTTATTGT+TGG + chr5_3:6441397-6441416 Msa0794570:intron 15.0%
!!! AAATAATTACATTTTCAATG+AGG - chr5_3:6441490-6441509 None:intergenic 15.0%
!! TATTTCAATATTTGATTCAT+AGG + chr5_3:6442009-6442028 Msa0794570:intron 15.0%
!! CATATACTAATATAATATCA+AGG - chr5_3:6442101-6442120 None:intergenic 15.0%
!! AATCTCTATATCTATAATTT+AGG + chr5_3:6442159-6442178 Msa0794570:intron 15.0%
!!! AATATTTAGTAGTATTGATT+AGG - chr5_3:6442746-6442765 None:intergenic 15.0%
!!! AATTTTGAGTAAAGTTTGTT+AGG - chr5_3:6440912-6440931 None:intergenic 20.0%
!! GAGTATTTATATAGAATAGA+AGG - chr5_3:6441046-6441065 None:intergenic 20.0%
!! AAATGAATGAATGAATGTTT+GGG - chr5_3:6441102-6441121 None:intergenic 20.0%
!! AAAATGAATGAATGAATGTT+TGG - chr5_3:6441103-6441122 None:intergenic 20.0%
!! GTGAAAATAATGTATAATCA+TGG - chr5_3:6441347-6441366 None:intergenic 20.0%
!! ATCATCTAATATTATTGTTC+AGG + chr5_3:6441573-6441592 Msa0794570:intron 20.0%
!! ATAAAAAAGCTATTGTATGT+AGG + chr5_3:6441644-6441663 Msa0794570:intron 20.0%
!! TAAAAAAGCTATTGTATGTA+GGG + chr5_3:6441645-6441664 Msa0794570:intron 20.0%
!! TAGTACATAATATTGTGAAA+TGG - chr5_3:6441865-6441884 None:intergenic 20.0%
!! TATTTGATTCATAGGTTTAT+TGG + chr5_3:6442017-6442036 Msa0794570:intron 20.0%
!!! AATATAATATCAAGGGTATA+AGG - chr5_3:6442093-6442112 None:intergenic 20.0%
!!! TTGTTTTTCTTTTCGTTTAT+AGG + chr5_3:6442783-6442802 Msa0794570:intron 20.0%
!!! AACATTCTTATTTGGTTAAT+TGG + chr5_3:6443277-6443296 Msa0794570:three_prime_UTR 20.0%
! GATTTATGATTCAAGGAATT+TGG + chr5_3:6441542-6441561 Msa0794570:intron 25.0%
! TCAGGATAATATTTGATTGA+TGG + chr5_3:6441591-6441610 Msa0794570:intron 25.0%
! GAATAACGTGATTATCTATT+TGG + chr5_3:6442230-6442249 Msa0794570:intron 25.0%
!! AGATTGTATTGTACCTTTTT+GGG - chr5_3:6442412-6442431 None:intergenic 25.0%
!!! TTTCTAAGATTTCCATATTG+TGG + chr5_3:6442813-6442832 Msa0794570:intron 25.0%
!!! TTTCTAAGATTTCCATATTG+TGG + chr5_3:6442813-6442832 Msa0794570:intron 25.0%
! ATTAGCATATTACCACAATA+TGG - chr5_3:6442878-6442897 None:intergenic 25.0%
! TCAAATTATCTATGAAGAGT+TGG + chr5_3:6443253-6443272 Msa0794570:three_prime_UTR 25.0%
! GCATACTTTAATTATTTGCT+TGG + chr5_3:6443302-6443321 Msa0794570:three_prime_UTR 25.0%
CACGTGAACGTAAAATATTA+GGG + chr5_3:6440990-6441009 Msa0794570:five_prime_UTR 30.0%
TTACGAAGCGAATGAAAATT+TGG - chr5_3:6441077-6441096 None:intergenic 30.0%
CCATTGATGAATGAATTGAT+TGG - chr5_3:6441136-6441155 None:intergenic 30.0%
CCAATCAATTCATTCATCAA+TGG + chr5_3:6441133-6441152 Msa0794570:exon 30.0%
! AAAGATTTTATCTCCGGATT+TGG - chr5_3:6441189-6441208 None:intergenic 30.0%
TTAGATCAGTTTCTCATATG+TGG + chr5_3:6441265-6441284 Msa0794570:intron 30.0%
!! TGCTGTTGATTTATGATTCA+AGG + chr5_3:6441535-6441554 Msa0794570:intron 30.0%
!! TAGGTTTATTGGTGTTGTAA+TGG + chr5_3:6442028-6442047 Msa0794570:intron 30.0%
TTATTTGCTTAACCCCAAAA+AGG + chr5_3:6442396-6442415 Msa0794570:CDS 30.0%
! GATTGTATTGTACCTTTTTG+GGG - chr5_3:6442411-6442430 None:intergenic 30.0%
! CAGATTGTATTGTACCTTTT+TGG - chr5_3:6442413-6442432 None:intergenic 30.0%
! CAAAAAGGTACAATACAATC+TGG + chr5_3:6442411-6442430 Msa0794570:intron 30.0%
! ACTTTTCAATGAACACTTTC+AGG + chr5_3:6442499-6442518 Msa0794570:intron 30.0%
AACGAAAAGAAAAACAAGCA+GGG - chr5_3:6442780-6442799 None:intergenic 30.0%
AAACGAAAAGAAAAACAAGC+AGG - chr5_3:6442781-6442800 None:intergenic 30.0%
TGGTAATATGCTACGTTTAT+AGG + chr5_3:6442833-6442852 Msa0794570:intron 30.0%
CATAGATCAGTAACAAATTG+TGG - chr5_3:6442933-6442952 None:intergenic 30.0%
TGATCTTATTGCATATCTGA+AGG + chr5_3:6443024-6443043 Msa0794570:CDS 30.0%
AATATATAATCACTGTGCAG+TGG - chr5_3:6443053-6443072 None:intergenic 30.0%
GTATCTTTGGCAAATAAAGT+AGG + chr5_3:6443156-6443175 Msa0794570:three_prime_UTR 30.0%
TTGATTGAGCAACCAATATT+TGG - chr5_3:6443237-6443256 None:intergenic 30.0%
GAGTTGGAAACATTCTTATT+TGG + chr5_3:6443269-6443288 Msa0794570:three_prime_UTR 30.0%
! CCTAATATTTTACGTTCACG+TGG - chr5_3:6440992-6441011 None:intergenic 35.0%
CCACGTGAACGTAAAATATT+AGG + chr5_3:6440989-6441008 Msa0794570:five_prime_UTR 35.0%
! GGTTCGAAAGATTTTATCTC+CGG - chr5_3:6441195-6441214 None:intergenic 35.0%
ATGTGGAAATGGAACGATTA+AGG - chr5_3:6441369-6441388 None:intergenic 35.0%
AATTGCATAGCATGTGGAAA+TGG - chr5_3:6441380-6441399 None:intergenic 35.0%
AACACAAATTGCATAGCATG+TGG - chr5_3:6441386-6441405 None:intergenic 35.0%
!! AGCACAATAAGTTTGTTGCA+CGG - chr5_3:6441429-6441448 None:intergenic 35.0%
AGCAGTATTATTGTCAATCG+TGG + chr5_3:6441776-6441795 Msa0794570:intron 35.0%
GCAGTATTATTGTCAATCGT+GGG + chr5_3:6441777-6441796 Msa0794570:intron 35.0%
! GTTTTTCATTACTCCTTTGC+TGG + chr5_3:6442120-6442139 Msa0794570:intron 35.0%
!! TTTGCCTTGTTGATAATCTC+AGG + chr5_3:6442262-6442281 Msa0794570:intron 35.0%
CCAAACAAACCATTCAGATT+GGG - chr5_3:6442289-6442308 None:intergenic 35.0%
TCCAAACAAACCATTCAGAT+TGG - chr5_3:6442290-6442309 None:intergenic 35.0%
!! ATCTGAATGGTTTGTTTGGA+AGG + chr5_3:6442290-6442309 Msa0794570:CDS 35.0%
!! TTGCTTGTTATATGTGAAGG+TGG - chr5_3:6442633-6442652 None:intergenic 35.0%
ACCTTCACATATAACAAGCA+AGG + chr5_3:6442632-6442651 Msa0794570:intron 35.0%
AGTTGTAAGCTAATCCAAAC+TGG + chr5_3:6442706-6442725 Msa0794570:intron 35.0%
TTGATTAGGAGTGAAGCATA+TGG - chr5_3:6442732-6442751 None:intergenic 35.0%
CGTAGCATATTACCACAATA+TGG - chr5_3:6442828-6442847 None:intergenic 35.0%
AGATCAGTAACAAATTGTGG+TGG - chr5_3:6442930-6442949 None:intergenic 35.0%
AATAAGATCAGCACGTTCTT+GGG - chr5_3:6443014-6443033 None:intergenic 35.0%
!!! ACAGTGTGATTTTGAAGTTC+TGG + chr5_3:6443090-6443109 Msa0794570:three_prime_UTR 35.0%
AGAAGTTTGCACTGTATCTT+TGG + chr5_3:6443143-6443162 Msa0794570:three_prime_UTR 35.0%
GCAAATAAAGTAGGCTACAT+TGG + chr5_3:6443165-6443184 Msa0794570:three_prime_UTR 35.0%
CTCAAAAAGCTGCCAAATAT+TGG + chr5_3:6443222-6443241 Msa0794570:three_prime_UTR 35.0%
TGCTTAGCTCAATAAGTACT+AGG + chr5_3:6443372-6443391 Msa0794570:three_prime_UTR 35.0%
! TCAATAGTAGCGTTAGCTTG+AGG - chr5_3:6440954-6440973 None:intergenic 40.0%
!! ACGTTCACGTGGATTGTTTT+TGG - chr5_3:6440981-6441000 None:intergenic 40.0%
CGAAGCGAATGAAAATTTGG+AGG - chr5_3:6441074-6441093 None:intergenic 40.0%
! GATCTAACCTTGTTTGTGAC+CGG - chr5_3:6441252-6441271 None:intergenic 40.0%
! TTATTGTCAATCGTGGGTTG+CGG + chr5_3:6441783-6441802 Msa0794570:intron 40.0%
!! CCCAATCTGAATGGTTTGTT+TGG + chr5_3:6442286-6442305 Msa0794570:CDS 40.0%
ACAAGAACATGGCTGTGAAT+TGG + chr5_3:6442353-6442372 Msa0794570:CDS 40.0%
CAAGAACATGGCTGTGAATT+GGG + chr5_3:6442354-6442373 Msa0794570:CDS 40.0%
GTTATATGTGAAGGTGGCAA+TGG - chr5_3:6442627-6442646 None:intergenic 40.0%
!! GCCTTGCTTGTTATATGTGA+AGG - chr5_3:6442636-6442655 None:intergenic 40.0%
CTCTTGTGCAGTATATTCCA+GGG + chr5_3:6442957-6442976 Msa0794570:intron 40.0%
TTCTTGGGGTTTCTTTAGAC+CGG - chr5_3:6442999-6443018 None:intergenic 40.0%
ATAAGATCAGCACGTTCTTG+GGG - chr5_3:6443013-6443032 None:intergenic 40.0%
CAATAAGATCAGCACGTTCT+TGG - chr5_3:6443015-6443034 None:intergenic 40.0%
!!! GTGTGATTTTGAAGTTCTGG+AGG + chr5_3:6443093-6443112 Msa0794570:three_prime_UTR 40.0%
ATCAAACTCAGTGCCAGCAA+AGG - chr5_3:6442136-6442155 None:intergenic 45.0%
GGGTCCTGAGATTATCAACA+AGG - chr5_3:6442269-6442288 None:intergenic 45.0%
ATCTCAGGACCCAATCTGAA+TGG + chr5_3:6442277-6442296 Msa0794570:intron 45.0%
! GGTTTGTTTGGAAGGCAATC+AGG + chr5_3:6442298-6442317 Msa0794570:CDS 45.0%
TACTCCCGGATATTCCTACT+CGG + chr5_3:6442324-6442343 Msa0794570:CDS 45.0%
AGTGAAGCATATGGCCAGTT+TGG - chr5_3:6442723-6442742 None:intergenic 45.0%
GCTCTTGTGCAGTATATTCC+AGG + chr5_3:6442956-6442975 Msa0794570:intron 45.0%
GTATATTCCAGGGACCAAGA+TGG + chr5_3:6442967-6442986 Msa0794570:intron 45.0%
TAGACCGGGAAATACCATCT+TGG - chr5_3:6442984-6443003 None:intergenic 45.0%
TCTTGGGGTTTCTTTAGACC+GGG - chr5_3:6442998-6443017 None:intergenic 45.0%
TCGTTTGAACAAGCACCTCC+CGG + chr5_3:6441158-6441177 Msa0794570:CDS 50.0%
ATCTCCGGATTTGGCATCAC+CGG - chr5_3:6441180-6441199 None:intergenic 50.0%
TCAGTGTCACACCGTCGATA+AGG + chr5_3:6441223-6441242 Msa0794570:CDS 50.0%
CAGTGTCACACCGTCGATAA+GGG + chr5_3:6441224-6441243 Msa0794570:CDS 50.0%
AGCTGCCGAGTAGGAATATC+CGG - chr5_3:6442332-6442351 None:intergenic 50.0%
GTTCTTGTTAGCTGCCGAGT+AGG - chr5_3:6442341-6442360 None:intergenic 50.0%
CTCGGCAGCTAACAAGAACA+TGG + chr5_3:6442342-6442361 Msa0794570:CDS 50.0%
GAACATGGCTGTGAATTGGG+AGG + chr5_3:6442357-6442376 Msa0794570:CDS 50.0%
GGAAATACCATCTTGGTCCC+TGG - chr5_3:6442977-6442996 None:intergenic 50.0%
GGGACCAAGATGGTATTTCC+CGG + chr5_3:6442977-6442996 Msa0794570:CDS 50.0%
! TAGAAGGCGTGTGTGTGCCA+CGG - chr5_3:6441030-6441049 None:intergenic 55.0%
TCTCCGGATTTGGCATCACC+GGG - chr5_3:6441179-6441198 None:intergenic 55.0%
GGTGTGACACTGAGCGCATT+TGG - chr5_3:6441216-6441235 None:intergenic 55.0%
!! AAGGGTGCCGGTCACAAACA+AGG + chr5_3:6441242-6441261 Msa0794570:CDS 55.0%
AGGCAATCAGGCACTACTCC+CGG + chr5_3:6442310-6442329 Msa0794570:CDS 55.0%
GCTGCCGAGTAGGAATATCC+GGG - chr5_3:6442331-6442350 None:intergenic 55.0%
GGGCTGCGTTAGAAACACCG+TGG + chr5_3:6441010-6441029 Msa0794570:five_prime_UTR 60.0%
CCTCCCGGTGATGCCAAATC+CGG + chr5_3:6441173-6441192 Msa0794570:CDS 60.0%
! CACACCGTCGATAAGGGTGC+CGG + chr5_3:6441230-6441249 Msa0794570:CDS 60.0%
GTGACCGGCACCCTTATCGA+CGG - chr5_3:6441237-6441256 None:intergenic 60.0%
CCGGATTTGGCATCACCGGG+AGG - chr5_3:6441176-6441195 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 6440908 6443396 6440908 ID=Msa0794570;Name=Msa0794570
chr5_3 mRNA 6440908 6443396 6440908 ID=Msa0794570-mRNA-1;Parent=Msa0794570;Name=Msa0794570-mRNA-1;_AED=0.00;_eAED=0.00;_QI=244|1|1|1|1|1|3|333|113
chr5_3 exon 6440908 6441263 6440908 ID=Msa0794570-mRNA-1:exon:2579;Parent=Msa0794570-mRNA-1
chr5_3 exon 6442284 6442417 6442284 ID=Msa0794570-mRNA-1:exon:2580;Parent=Msa0794570-mRNA-1
chr5_3 exon 6442968 6443396 6442968 ID=Msa0794570-mRNA-1:exon:2581;Parent=Msa0794570-mRNA-1
chr5_3 five_prime_UTR 6440908 6441151 6440908 ID=Msa0794570-mRNA-1:five_prime_utr;Parent=Msa0794570-mRNA-1
chr5_3 CDS 6441152 6441263 6441152 ID=Msa0794570-mRNA-1:cds;Parent=Msa0794570-mRNA-1
chr5_3 CDS 6442284 6442417 6442284 ID=Msa0794570-mRNA-1:cds;Parent=Msa0794570-mRNA-1
chr5_3 CDS 6442968 6443063 6442968 ID=Msa0794570-mRNA-1:cds;Parent=Msa0794570-mRNA-1
chr5_3 three_prime_UTR 6443064 6443396 6443064 ID=Msa0794570-mRNA-1:three_prime_utr;Parent=Msa0794570-mRNA-1
Gene Sequence

>Msa0794570

ATGGCGTCGTTTGAACAAGCACCTCCCGGTGATGCCAAATCCGGAGATAAAATCTTTCGAACCAAATGCGCTCAGTGTCACACCGTCGATAAGGGTGCCGGTCACAAACAAGGACCCAATCTGAATGGTTTGTTTGGAAGGCAATCAGGCACTACTCCCGGATATTCCTACTCGGCAGCTAACAAGAACATGGCTGTGAATTGGGAGGAAAAGACTTTATATGATTATTTGCTTAACCCCAAAAAGTATATTCCAGGGACCAAGATGGTATTTCCCGGTCTAAAGAAACCCCAAGAACGTGCTGATCTTATTGCATATCTGAAGGAAGCCACTGCACAGTGA
Protein sequence

>Msa0794570

MASFEQAPPGDAKSGDKIFRTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATAQ*