Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0811120 | XP_003615315.2 | 75.502 | 249 | 35 | 2 | 1 | 223 | 1 | 249 | 9.32e-77 | 259 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0811120 | G7JYF3 | 75.502 | 249 | 35 | 2 | 1 | 223 | 1 | 249 | 4.45e-77 | 259 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0732640 | Msa0811120 | 0.877535 | 5.811490e-69 | -8.615850e-47 |
| Msa0732650 | Msa0811120 | 0.842179 | 3.028480e-58 | -8.615850e-47 |
| Msa0773550 | Msa0811120 | 0.835902 | 1.280561e-56 | -8.615850e-47 |
| Msa0773690 | Msa0811120 | 0.834546 | 2.815285e-56 | -8.615850e-47 |
| Msa0811110 | Msa0811120 | 0.829551 | 4.831655e-55 | -8.615850e-47 |
| Msa0811120 | Msa0866450 | 0.891179 | 5.028217e-74 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0811120 | MtrunA17_Chr5g0427651 | 75.502 | 249 | 35 | 2 | 1 | 223 | 1 | 249 | 8.57e-81 | 259 |
| Msa0811120 | MtrunA17_Chr3g0132791 | 42.083 | 240 | 95 | 12 | 1 | 222 | 1 | 214 | 3.38e-31 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0811120 | AT4G24480.2 | 32.472 | 271 | 121 | 9 | 1 | 217 | 1 | 263 | 2.41e-20 | 89.7 |
| Msa0811120 | AT4G24480.1 | 32.472 | 271 | 121 | 9 | 1 | 217 | 1 | 263 | 2.41e-20 | 89.7 |
| Msa0811120 | AT4G24480.3 | 32.472 | 271 | 121 | 9 | 1 | 217 | 1 | 263 | 2.72e-20 | 89.7 |
Find 225 sgRNAs with CRISPR-Local
Find 476 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCAAGATTCACATATTT+TGG | 0.083444 | 5_3:+40283918 | None:intergenic |
| AAAACTTGTTGCTATCTTTA+TGG | 0.109717 | 5_3:-40285879 | Msa0811120:three_prime_UTR |
| AGCAAATCAGTTTCTTTATT+TGG | 0.126811 | 5_3:+40284273 | None:intergenic |
| AATCTTTATTACATAATTAT+AGG | 0.164855 | 5_3:+40280147 | None:intergenic |
| TTTCGGGCTGTCCAGATTTA+AGG | 0.200762 | 5_3:-40282469 | Msa0811120:three_prime_UTR |
| TGACTTTAGCAGCTTCTTTA+TGG | 0.225672 | 5_3:+40280589 | None:intergenic |
| TATGCTCAGGTGTGTGATTT+CGG | 0.232608 | 5_3:-40282486 | Msa0811120:intron |
| TAGTATTGATGGAACCTTAA+TGG | 0.233102 | 5_3:-40280395 | Msa0811120:three_prime_UTR |
| CCCAGTATTGGCCTCCCTTA+TGG | 0.244449 | 5_3:-40281154 | Msa0811120:three_prime_UTR |
| TCTCATTGTAAGAAATTTCT+TGG | 0.257410 | 5_3:+40284033 | None:intergenic |
| ATGCTCAGGTGTGTGATTTC+GGG | 0.266639 | 5_3:-40282485 | Msa0811120:intron |
| TTTATTTATGCAGGATCATT+TGG | 0.282685 | 5_3:-40283751 | Msa0811120:intron |
| TCTAACAATCAACTGTATTC+AGG | 0.283652 | 5_3:-40284757 | Msa0811120:intron |
| TCCATAAGGGAGGCCAATAC+TGG | 0.287723 | 5_3:+40281153 | None:intergenic |
| AAACTTGTTGCTATCTTTAT+GGG | 0.295581 | 5_3:-40285878 | Msa0811120:three_prime_UTR |
| GGGCCAGATTCCTCAATTAA+TGG | 0.297580 | 5_3:-40284895 | Msa0811120:three_prime_UTR |
| TATGTCTCGTGACTTGCTTC+TGG | 0.301829 | 5_3:-40280178 | Msa0811120:three_prime_UTR |
| CCTCCCTTATGGAATCTTGT+TGG | 0.303802 | 5_3:-40281143 | Msa0811120:three_prime_UTR |
| AAGTCTGATGTTTATAGTTT+TGG | 0.311358 | 5_3:-40281414 | Msa0811120:three_prime_UTR |
| GAAAGTATTTGCCTTAAATC+TGG | 0.315219 | 5_3:+40282458 | None:intergenic |
| TTGAGATCCCAGTGCACTAT+TGG | 0.320552 | 5_3:+40282637 | None:intergenic |
| TTGTCCTCAAAATCTGTTGC+TGG | 0.333411 | 5_3:-40282435 | Msa0811120:three_prime_UTR |
| CCTTAATGGTTGTTTGCAAC+TGG | 0.336229 | 5_3:-40280381 | Msa0811120:three_prime_UTR |
| TGGATGCTGGCCTGTGAATC+AGG | 0.342327 | 5_3:+40282822 | None:intergenic |
| TGAACCCAATGAGAGTTCTT+TGG | 0.343520 | 5_3:-40286014 | Msa0811120:three_prime_UTR |
| TGAGCATCTGCTGCCGGATT+CGG | 0.345002 | 5_3:-40287199 | Msa0811120:CDS |
| CATGAGCGACATGCTCCTTA+TGG | 0.347848 | 5_3:+40280501 | None:intergenic |
| CTCAAATGAGAAATTTGAAA+TGG | 0.348440 | 5_3:+40284847 | None:intergenic |
| GAATTTCCTTCCTACATTGA+TGG | 0.349552 | 5_3:-40286050 | Msa0811120:three_prime_UTR |
| TGTAATAATGCTTCAGAGGC+TGG | 0.356384 | 5_3:+40284092 | None:intergenic |
| CAGAGATTGGCGGATTATAT+AGG | 0.358172 | 5_3:-40285312 | Msa0811120:three_prime_UTR |
| ACGAGTACGCCTCCCGTGAT+TGG | 0.359290 | 5_3:-40280534 | Msa0811120:three_prime_UTR |
| CTCCCTTATGGAATCTTGTT+GGG | 0.359987 | 5_3:-40281142 | Msa0811120:three_prime_UTR |
| GCCGCATTGCTCGAGGTTGC+AGG | 0.362188 | 5_3:-40285281 | Msa0811120:three_prime_UTR |
| CTACTTGTTCCTGCTTTGAC+TGG | 0.365162 | 5_3:+40283976 | None:intergenic |
| ACATCAGACTTCTCGTTTGT+AGG | 0.368339 | 5_3:+40281426 | None:intergenic |
| GGGGAACCAGGAAATATTAC+TGG | 0.369479 | 5_3:-40284916 | Msa0811120:three_prime_UTR |
| CCTTGGATCGTGCATTTCAC+TGG | 0.371828 | 5_3:+40282802 | None:intergenic |
| TTCTCTCATTGTAGGCTAAA+GGG | 0.374737 | 5_3:-40282687 | Msa0811120:intron |
| AAGGGAAGTTCAGTGGTAAA+TGG | 0.375926 | 5_3:-40284002 | Msa0811120:three_prime_UTR |
| TCATGCTAACACATTTCATA+AGG | 0.376322 | 5_3:-40280346 | Msa0811120:three_prime_UTR |
| AGTATGTTGTTGACCTTGTT+GGG | 0.376604 | 5_3:-40284936 | Msa0811120:three_prime_UTR |
| TCCAAATGTGGTGCTCTTCA+TGG | 0.376916 | 5_3:-40283011 | Msa0811120:three_prime_UTR |
| TTACATGACATTCCATTTGT+TGG | 0.377586 | 5_3:-40284074 | Msa0811120:three_prime_UTR |
| CTTTCTTTCTTATCAACCCT+TGG | 0.383900 | 5_3:-40286853 | Msa0811120:intron |
| GCCAATACTGGGGAGACATT+TGG | 0.386803 | 5_3:+40281165 | None:intergenic |
| TGGTCATAAACTAGTATTGA+TGG | 0.388370 | 5_3:-40280406 | Msa0811120:three_prime_UTR |
| GCAAAAGATGGGCGATCGGC+AGG | 0.391490 | 5_3:+40280626 | None:intergenic |
| TTTCTCTCATTGTAGGCTAA+AGG | 0.398065 | 5_3:-40282688 | Msa0811120:intron |
| GAGACATTTGGAGGGATAGA+AGG | 0.399972 | 5_3:+40281177 | None:intergenic |
| CACTTCCAAAGAACTCTCAT+TGG | 0.400138 | 5_3:+40286009 | None:intergenic |
| TGCAGATCCCCTTGCTCCAC+AGG | 0.400825 | 5_3:+40285627 | None:intergenic |
| TAAAATATGTTGGCTATGTA+TGG | 0.401857 | 5_3:-40280461 | Msa0811120:three_prime_UTR |
| TCTGGCCCAGTAATATTTCC+TGG | 0.407911 | 5_3:+40284910 | None:intergenic |
| GAAGACACCTTCGCCGAATC+CGG | 0.408833 | 5_3:+40287186 | None:intergenic |
| CCCATGAAGAGCACCACATT+TGG | 0.410475 | 5_3:+40283010 | None:intergenic |
| CCAGTTGCAAACAACCATTA+AGG | 0.410629 | 5_3:+40280381 | None:intergenic |
| GCTTCAGTTGATAAAACTCC+TGG | 0.412970 | 5_3:-40284225 | Msa0811120:three_prime_UTR |
| ACTGAATCTTTACCAACAAA+TGG | 0.415679 | 5_3:+40284062 | None:intergenic |
| TTATTTATGCAGGATCATTT+GGG | 0.416542 | 5_3:-40283750 | Msa0811120:intron |
| GAGCTGTCGCATTTCAGAAT+AGG | 0.418005 | 5_3:-40281203 | Msa0811120:three_prime_UTR |
| TCCATTCCATGGTTGTTGTA+AGG | 0.427541 | 5_3:+40281368 | None:intergenic |
| ACAAGTAACCTGACCCTTGT+TGG | 0.429048 | 5_3:-40280426 | Msa0811120:three_prime_UTR |
| GAATGAACAAGAAGAAGAAA+AGG | 0.430156 | 5_3:-40286968 | Msa0811120:CDS |
| TCAACTATGCTGGCAAAAGA+TGG | 0.430391 | 5_3:+40280614 | None:intergenic |
| GTTCCTTCCCTGTGGAGCAA+GGG | 0.432823 | 5_3:-40285635 | Msa0811120:three_prime_UTR |
| GCTCCATTAATTGAGGAATC+TGG | 0.433747 | 5_3:+40284892 | None:intergenic |
| CTCAAAATCTGTTGCTGGAA+CGG | 0.434544 | 5_3:-40282430 | Msa0811120:intron |
| GCCATTCGTAATCTTCTCCT+TGG | 0.435692 | 5_3:+40282785 | None:intergenic |
| CAGGTTGAACTTTCACTTCA+CGG | 0.437302 | 5_3:-40281531 | Msa0811120:three_prime_UTR |
| CTAGGCAATTTCCAGAGAAA+AGG | 0.442911 | 5_3:-40287566 | Msa0811120:CDS |
| TGGACTGGCTTGAGATATCA+TGG | 0.445535 | 5_3:-40283884 | Msa0811120:three_prime_UTR |
| CGACTTCATAACCAGGGTGC+TGG | 0.445882 | 5_3:-40283948 | Msa0811120:three_prime_UTR |
| CGAGTACGCCTCCCGTGATT+GGG | 0.449076 | 5_3:-40280533 | Msa0811120:three_prime_UTR |
| TTTGATCTTCACAAGAATAG+AGG | 0.450406 | 5_3:+40285236 | None:intergenic |
| GCATCGCGCAATTCTCTTCA+AGG | 0.451312 | 5_3:-40285514 | Msa0811120:intron |
| AGATGGTTAGTAAGCGGTTG+AGG | 0.457571 | 5_3:-40285593 | Msa0811120:three_prime_UTR |
| ACTTCCAAAGAACTCTCATT+GGG | 0.457630 | 5_3:+40286010 | None:intergenic |
| GTTTATTTCGCCTGATTCAC+AGG | 0.459329 | 5_3:-40282832 | Msa0811120:three_prime_UTR |
| CATGCTAACACATTTCATAA+GGG | 0.461915 | 5_3:-40280345 | Msa0811120:three_prime_UTR |
| CAGCCCAACAAGATTCCATA+AGG | 0.462865 | 5_3:+40281139 | None:intergenic |
| ATGTTGATAGAAGATTTGAT+AGG | 0.464269 | 5_3:-40287143 | Msa0811120:CDS |
| GAGTATGTTGTTGACCTTGT+TGG | 0.468190 | 5_3:-40284937 | Msa0811120:three_prime_UTR |
| CCCGTGGACAAACTACCAAC+TGG | 0.473966 | 5_3:+40285546 | None:intergenic |
| GACTTCATAACCAGGGTGCT+GGG | 0.477831 | 5_3:-40283947 | Msa0811120:three_prime_UTR |
| TCCAGTTGGTAGTTTGTCCA+CGG | 0.479090 | 5_3:-40285547 | Msa0811120:three_prime_UTR |
| AGATCCCAGTGCACTATTGG+AGG | 0.479354 | 5_3:+40282640 | None:intergenic |
| GGTTCCTTCCCTGTGGAGCA+AGG | 0.481640 | 5_3:-40285636 | Msa0811120:three_prime_UTR |
| TTCTGCTTCTGAGAATGCCT+TGG | 0.485336 | 5_3:-40285921 | Msa0811120:three_prime_UTR |
| TCGTGCATTTCACTGGATGC+TGG | 0.485741 | 5_3:+40282809 | None:intergenic |
| TTGGTGCTTGTTGAAAAGCT+TGG | 0.485912 | 5_3:-40285902 | Msa0811120:three_prime_UTR |
| GTTTATGACCAACAAGGGTC+AGG | 0.487768 | 5_3:+40280418 | None:intergenic |
| CTTTATGGTCTCAACTATGC+TGG | 0.489632 | 5_3:+40280604 | None:intergenic |
| AGGTTGCAGGTACTGTGCTT+CGG | 0.491574 | 5_3:-40285268 | Msa0811120:three_prime_UTR |
| TACAATGAGATCATTGCAAA+GGG | 0.494339 | 5_3:-40284020 | Msa0811120:three_prime_UTR |
| TCCAAATGTCTCCCCAGTAT+TGG | 0.494916 | 5_3:-40281166 | Msa0811120:three_prime_UTR |
| GTTGACCTTGTTGGGGAACC+AGG | 0.495325 | 5_3:-40284928 | Msa0811120:three_prime_UTR |
| TGCAATGACATGGAGGAAGA+AGG | 0.496599 | 5_3:-40286073 | Msa0811120:three_prime_UTR |
| GAAGGTGTCTTCGCCGGAGA+AGG | 0.496866 | 5_3:-40287175 | Msa0811120:CDS |
| TGAAGCCTCCAATAGTGCAC+TGG | 0.498133 | 5_3:-40282645 | Msa0811120:three_prime_UTR |
| ATCAAAGAACGCATTGGTGC+TGG | 0.498755 | 5_3:-40283849 | Msa0811120:intron |
| GCTTTAAGCGCCATCAATGT+AGG | 0.504010 | 5_3:+40286040 | None:intergenic |
| GGATCGTGAGCATCTGCTGC+CGG | 0.506553 | 5_3:-40287205 | Msa0811120:CDS |
| TTCCTTCCCTGTGGAGCAAG+GGG | 0.509142 | 5_3:-40285634 | Msa0811120:three_prime_UTR |
| CATGTGTATCCTCAGGTGGT+TGG | 0.509740 | 5_3:-40281225 | Msa0811120:intron |
| GGGATTGTTGTAATTGTAAG+TGG | 0.510700 | 5_3:-40280260 | Msa0811120:three_prime_UTR |
| CTATGAACTACAACAAGCCT+TGG | 0.513723 | 5_3:-40286884 | Msa0811120:CDS |
| ACATCAACAGCATCCTTCTC+CGG | 0.514678 | 5_3:+40287162 | None:intergenic |
| CCATAAGGGAGGCCAATACT+GGG | 0.514867 | 5_3:+40281154 | None:intergenic |
| CACATATGCTCCATTAATTG+AGG | 0.521191 | 5_3:+40284885 | None:intergenic |
| AATACTGGGGAGACATTTGG+AGG | 0.528815 | 5_3:+40281168 | None:intergenic |
| CCAAATGTGGTGCTCTTCAT+GGG | 0.530102 | 5_3:-40283010 | Msa0811120:three_prime_UTR |
| TTTCTGTCGCTAAAATATGT+TGG | 0.531257 | 5_3:-40280471 | Msa0811120:three_prime_UTR |
| GTAATAATGCTTCAGAGGCT+GGG | 0.531732 | 5_3:+40284093 | None:intergenic |
| GGTTCATTCCACCCAATCAC+GGG | 0.532325 | 5_3:+40280522 | None:intergenic |
| CAGTGTGTTGTGCTTCCAGT+TGG | 0.532963 | 5_3:-40285561 | Msa0811120:three_prime_UTR |
| TTACAATGAGATCATTGCAA+AGG | 0.535482 | 5_3:-40284021 | Msa0811120:three_prime_UTR |
| ATGGCTCCAGAGTTTCTTCG+TGG | 0.536115 | 5_3:-40281453 | Msa0811120:three_prime_UTR |
| GGTTCTCCACGAAGAAACTC+TGG | 0.544195 | 5_3:+40281447 | None:intergenic |
| CAACTATGCTGGCAAAAGAT+GGG | 0.544705 | 5_3:+40280615 | None:intergenic |
| TTGTGAAGATCAAAGATGAC+AGG | 0.548212 | 5_3:-40285227 | Msa0811120:three_prime_UTR |
| TTCGGCGAAGGTGTCTTCGC+CGG | 0.548758 | 5_3:-40287181 | Msa0811120:CDS |
| TGTTGATAGAAGATTTGATA+GGG | 0.549841 | 5_3:-40287142 | Msa0811120:CDS |
| AGGAGCATGTCGCTCATGAT+CGG | 0.550012 | 5_3:-40280496 | Msa0811120:three_prime_UTR |
| GACGATGACGGCGGTGATGG+TGG | 0.550769 | 5_3:+40287301 | None:intergenic |
| AGCCAGTCCATTGCTAGTGA+TGG | 0.551807 | 5_3:+40283897 | None:intergenic |
| AAATGGTATCCAGTCAAAGC+AGG | 0.553596 | 5_3:-40283985 | Msa0811120:three_prime_UTR |
| CCAGTTGGTAGTTTGTCCAC+GGG | 0.554032 | 5_3:-40285546 | Msa0811120:three_prime_UTR |
| AACTCTGGAGCCATCCACTC+AGG | 0.554183 | 5_3:+40281462 | None:intergenic |
| TGGTTCATTCCACCCAATCA+CGG | 0.556199 | 5_3:+40280521 | None:intergenic |
| TACATTGATGGCGCTTAAAG+CGG | 0.556772 | 5_3:-40286038 | Msa0811120:three_prime_UTR |
| GAAAGAAAGCCTCTTTGCCA+AGG | 0.557707 | 5_3:+40286867 | None:intergenic |
| CCAGTGAAATGCACGATCCA+AGG | 0.558245 | 5_3:-40282802 | Msa0811120:three_prime_UTR |
| TTTGTTGATGCAGAGATTGG+CGG | 0.559377 | 5_3:-40285322 | Msa0811120:intron |
| TCTTGAACCATCACTAGCAA+TGG | 0.564083 | 5_3:-40283904 | Msa0811120:three_prime_UTR |
| GATGACGGCGGTGATGGTGG+TGG | 0.564497 | 5_3:+40287304 | None:intergenic |
| TCTGCTGCCGGATTCGGCGA+AGG | 0.564941 | 5_3:-40287193 | Msa0811120:CDS |
| GAGGACGATGACGGCGGTGA+TGG | 0.565458 | 5_3:+40287298 | None:intergenic |
| TGAGAAATTTGAAATGGAGA+AGG | 0.565947 | 5_3:+40284853 | None:intergenic |
| AACCATCACTAGCAATGGAC+TGG | 0.566572 | 5_3:-40283899 | Msa0811120:three_prime_UTR |
| TTGCACATCACCCACAAGTA+CGG | 0.567949 | 5_3:+40286091 | None:intergenic |
| CTACAAGATAAAAGAGCTTG+AGG | 0.569825 | 5_3:+40280229 | None:intergenic |
| TTGCCGTGCCGCATTGCTCG+AGG | 0.576314 | 5_3:-40285288 | Msa0811120:three_prime_UTR |
| GGACAGTGTACCGTGCTGAA+TGG | 0.576758 | 5_3:-40283729 | Msa0811120:three_prime_UTR |
| ACTCTTTCAACTGATCGTCA+TGG | 0.577073 | 5_3:+40283388 | None:intergenic |
| GTATGTTGTTGACCTTGTTG+GGG | 0.577494 | 5_3:-40284935 | Msa0811120:three_prime_UTR |
| TACAACAAGCCTTGGCAAAG+AGG | 0.577536 | 5_3:-40286876 | Msa0811120:CDS |
| GAATGGACTTAGCCATGCCC+AGG | 0.578828 | 5_3:-40281352 | Msa0811120:intron |
| TACACTGACAAGATTGCAGA+TGG | 0.579916 | 5_3:-40286139 | Msa0811120:exon |
| AACTTGTTGCTATCTTTATG+GGG | 0.581303 | 5_3:-40285877 | Msa0811120:intron |
| GCAATGACATGGAGGAAGAA+GGG | 0.582057 | 5_3:-40286072 | Msa0811120:three_prime_UTR |
| AGCCCAACAAGATTCCATAA+GGG | 0.583261 | 5_3:+40281140 | None:intergenic |
| ATTGGGTGGAATGAACCATA+AGG | 0.583586 | 5_3:-40280516 | Msa0811120:three_prime_UTR |
| ACCTTACAACAACCATGGAA+TGG | 0.583688 | 5_3:-40281369 | Msa0811120:three_prime_UTR |
| AGATCATATTCTACATGAAG+AGG | 0.585003 | 5_3:-40287235 | Msa0811120:CDS |
| CATGTAGAATATGATCTGAT+CGG | 0.585719 | 5_3:+40287241 | None:intergenic |
| ATCCCCTTGCTCCACAGGGA+AGG | 0.586648 | 5_3:+40285632 | None:intergenic |
| TCAACGAGTTTACCTGGGCA+TGG | 0.589325 | 5_3:+40281340 | None:intergenic |
| CAAAAGATGGGCGATCGGCA+GGG | 0.591018 | 5_3:+40280627 | None:intergenic |
| GTCATGTAATAATGCTTCAG+AGG | 0.593398 | 5_3:+40284088 | None:intergenic |
| CGATGAGAAGAACTATGCTA+AGG | 0.594537 | 5_3:-40286920 | Msa0811120:CDS |
| CAACCTCGAGCAATGCGGCA+CGG | 0.594862 | 5_3:+40285285 | None:intergenic |
| TATTTCCTGGTTCCCCAACA+AGG | 0.595976 | 5_3:+40284923 | None:intergenic |
| GAAGCCTCCAATAGTGCACT+GGG | 0.596594 | 5_3:-40282644 | Msa0811120:three_prime_UTR |
| TGATTAAAACTTATAACTTG+AGG | 0.596824 | 5_3:+40284787 | None:intergenic |
| CTGCGGATCAAAGAACGCAT+TGG | 0.597029 | 5_3:-40283855 | Msa0811120:three_prime_UTR |
| GGTGATGATGATGCTGATGC+CGG | 0.600873 | 5_3:+40287268 | None:intergenic |
| GCATGGCTAAGTCCATTCCA+TGG | 0.604826 | 5_3:+40281357 | None:intergenic |
| GCTGGCAAAAGATGGGCGAT+CGG | 0.610221 | 5_3:+40280622 | None:intergenic |
| AGAAAATCGACTTCATAACC+AGG | 0.610279 | 5_3:-40283955 | Msa0811120:three_prime_UTR |
| GTTGAAAGAGTTCTTACGAG+AGG | 0.610688 | 5_3:-40283376 | Msa0811120:intron |
| GTTTGTCCACGGGACTCTGT+AGG | 0.613139 | 5_3:-40285536 | Msa0811120:three_prime_UTR |
| GCAGATCCCCTTGCTCCACA+GGG | 0.614608 | 5_3:+40285628 | None:intergenic |
| TGCTGATGCCGGTGTTGATG+AGG | 0.616204 | 5_3:+40287279 | None:intergenic |
| TGGGAATGAATCCGTACTTG+TGG | 0.616564 | 5_3:-40286102 | Msa0811120:three_prime_UTR |
| TGAAGAGCACCACATTTGGA+TGG | 0.617370 | 5_3:+40283014 | None:intergenic |
| TAGTGACAGAGTATTTGCCC+AGG | 0.619832 | 5_3:-40282958 | Msa0811120:intron |
| GATGCTGCATCATCCACGTA+GGG | 0.620434 | 5_3:+40284811 | None:intergenic |
| TGTGGTGCTCTTCATGGGTG+CGG | 0.620498 | 5_3:-40283005 | Msa0811120:three_prime_UTR |
| AAGATGACAGGCAACTGTCA+AGG | 0.620877 | 5_3:-40285215 | Msa0811120:intron |
| GTACGCCTCCCGTGATTGGG+TGG | 0.623100 | 5_3:-40280530 | Msa0811120:three_prime_UTR |
| GTGGGTGATGTGCAATGACA+TGG | 0.624923 | 5_3:-40286083 | Msa0811120:three_prime_UTR |
| AAAATCAGCAGTCAAATCAA+CGG | 0.625086 | 5_3:-40287499 | Msa0811120:CDS |
| GGGAACCAGGAAATATTACT+GGG | 0.628936 | 5_3:-40284915 | Msa0811120:three_prime_UTR |
| CTGATCCATGCCATTCAGCA+CGG | 0.630160 | 5_3:+40283719 | None:intergenic |
| CATTGCAAAGGGAAGTTCAG+TGG | 0.632388 | 5_3:-40284009 | Msa0811120:three_prime_UTR |
| TCCAAGGAGAAGATTACGAA+TGG | 0.633042 | 5_3:-40282786 | Msa0811120:three_prime_UTR |
| AGATATCATGGGATGAGCTG+CGG | 0.633760 | 5_3:-40283872 | Msa0811120:three_prime_UTR |
| ATTACGAATGGCTCTAGACG+TGG | 0.633771 | 5_3:-40282774 | Msa0811120:intron |
| TTGGAATATCCCCAGCACCC+TGG | 0.634335 | 5_3:+40283937 | None:intergenic |
| TAAGCGCCATCAATGTAGGA+AGG | 0.635856 | 5_3:+40286044 | None:intergenic |
| ACTTCATAACCAGGGTGCTG+GGG | 0.638614 | 5_3:-40283946 | Msa0811120:three_prime_UTR |
| TATTCTACATGAAGAGGACG+AGG | 0.638629 | 5_3:-40287229 | Msa0811120:CDS |
| TAGTGACCTTACAACAACCA+TGG | 0.641251 | 5_3:-40281374 | Msa0811120:three_prime_UTR |
| TACTAGTTTATGACCAACAA+GGG | 0.644209 | 5_3:+40280413 | None:intergenic |
| GGTGGAAGATGGTTAGTAAG+CGG | 0.644238 | 5_3:-40285599 | Msa0811120:three_prime_UTR |
| GGGAATGAATCCGTACTTGT+GGG | 0.644522 | 5_3:-40286101 | Msa0811120:three_prime_UTR |
| GAATATGATCTGATCGGTGA+CGG | 0.648976 | 5_3:+40287247 | None:intergenic |
| GTCATCGTCCTCATCAACAC+CGG | 0.655239 | 5_3:-40287287 | Msa0811120:CDS |
| GTGTACCGTGCTGAATGGCA+TGG | 0.657179 | 5_3:-40283724 | Msa0811120:three_prime_UTR |
| AAAATCTCAATTGCCCTACG+TGG | 0.658136 | 5_3:-40284824 | Msa0811120:three_prime_UTR |
| GATTCTTATTGATAGACGCG+AGG | 0.659542 | 5_3:-40285987 | Msa0811120:three_prime_UTR |
| TCTACATGAAGAGGACGAGG+AGG | 0.660634 | 5_3:-40287226 | Msa0811120:CDS |
| GGTGTTGATGAGGACGATGA+CGG | 0.663220 | 5_3:+40287289 | None:intergenic |
| GAAAATCGACTTCATAACCA+GGG | 0.668500 | 5_3:-40283954 | Msa0811120:three_prime_UTR |
| CCAACAAGATTCCATAAGGG+AGG | 0.671201 | 5_3:+40281143 | None:intergenic |
| AGATGCTGCATCATCCACGT+AGG | 0.674401 | 5_3:+40284810 | None:intergenic |
| GAAAAGGGGTTCCTTCCCTG+TGG | 0.675715 | 5_3:-40285643 | Msa0811120:intron |
| CTACAAATGAAGTTACAACA+AGG | 0.676610 | 5_3:-40286990 | Msa0811120:CDS |
| GGTGAAAAGTTCCGAAACAG+CGG | 0.678439 | 5_3:+40287401 | None:intergenic |
| TCATTCCACCCAATCACGGG+AGG | 0.681849 | 5_3:+40280525 | None:intergenic |
| ACGTGTCCGCCATCCAAATG+TGG | 0.684843 | 5_3:-40283023 | Msa0811120:three_prime_UTR |
| CATAAGGGAGGCCAATACTG+GGG | 0.690145 | 5_3:+40281155 | None:intergenic |
| TCTGTCACTATAGATAGATG+AGG | 0.694310 | 5_3:+40282971 | None:intergenic |
| GGACTGGCTTGAGATATCAT+GGG | 0.699073 | 5_3:-40283883 | Msa0811120:three_prime_UTR |
| TCAGTTGATAAAACTCCTGG+AGG | 0.705547 | 5_3:-40284222 | Msa0811120:intron |
| GAAGCTGCTAAAGTCACCAG+CGG | 0.706962 | 5_3:-40280582 | Msa0811120:three_prime_UTR |
| AGAGCACCACATTTGGATGG+CGG | 0.707353 | 5_3:+40283017 | None:intergenic |
| ATACTAGTTTATGACCAACA+AGG | 0.709827 | 5_3:+40280412 | None:intergenic |
| ATACTGGGGAGACATTTGGA+GGG | 0.720295 | 5_3:+40281169 | None:intergenic |
| TCACTATCGAGATTGTCGAG+TGG | 0.729705 | 5_3:-40287114 | Msa0811120:CDS |
| ACCTGCAACCTCGAGCAATG+CGG | 0.741416 | 5_3:+40285280 | None:intergenic |
| GGTGATGTGCAATGACATGG+AGG | 0.746191 | 5_3:-40286080 | Msa0811120:three_prime_UTR |
| GCGATGCCTACAGAGTCCCG+TGG | 0.768685 | 5_3:+40285530 | None:intergenic |
| GTTGATGAGGACGATGACGG+CGG | 0.781710 | 5_3:+40287292 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAAAAAAAAAAATTA+AGG | + | chr5_3:40285176-40285195 | None:intergenic | 0.0% |
| !! | AATCTTTATTACATAATTAT+AGG | + | chr5_3:40287570-40287589 | None:intergenic | 10.0% |
| !! | CATAAGAATAATAATAATCA+TGG | - | chr5_3:40281890-40281909 | Msa0811120:intron | 15.0% |
| !! | AATTAACAAATAAACTTGAT+GGG | + | chr5_3:40282560-40282579 | None:intergenic | 15.0% |
| !! | AAATTAACAAATAAACTTGA+TGG | + | chr5_3:40282561-40282580 | None:intergenic | 15.0% |
| !! | ACATTTGTTTAATCAATATT+AGG | + | chr5_3:40284372-40284391 | None:intergenic | 15.0% |
| !! | AAATTCATTGTATTTAGAAA+AGG | + | chr5_3:40284536-40284555 | None:intergenic | 15.0% |
| !!! | AATTTCAAGTTTAAATTTTG+AGG | - | chr5_3:40285426-40285445 | Msa0811120:intron | 15.0% |
| !!! | AAAAAGTGAATTACTTATTT+TGG | - | chr5_3:40287593-40287612 | Msa0811120:CDS | 15.0% |
| !!! | ATAATGGATTTGTTAGAATT+AGG | - | chr5_3:40281296-40281315 | Msa0811120:intron | 20.0% |
| !!! | TAATGGATTTGTTAGAATTA+GGG | - | chr5_3:40281297-40281316 | Msa0811120:intron | 20.0% |
| !!! | AGATGGATTTTATAACATAT+TGG | - | chr5_3:40281592-40281611 | Msa0811120:intron | 20.0% |
| !!! | GATGGATTTTATAACATATT+GGG | - | chr5_3:40281593-40281612 | Msa0811120:intron | 20.0% |
| !!! | TATCGATTTATTTATGTGTT+TGG | - | chr5_3:40282036-40282055 | Msa0811120:intron | 20.0% |
| !! | ATAAATACCTATCATATAAG+AGG | - | chr5_3:40282306-40282325 | Msa0811120:intron | 20.0% |
| !!! | TTGTTAATTTTATGTTTTCC+TGG | - | chr5_3:40282571-40282590 | Msa0811120:intron | 20.0% |
| !!! | GTAAATAATCTATCTAAAAC+CGG | + | chr5_3:40282613-40282632 | None:intergenic | 20.0% |
| !! | TTAGATTGCTCATATATATT+TGG | - | chr5_3:40282656-40282675 | Msa0811120:three_prime_UTR | 20.0% |
| !! | TGATTAAAACTTATAACTTG+AGG | + | chr5_3:40282930-40282949 | None:intergenic | 20.0% |
| !! | TTTATACCCTACTATAAATA+GGG | + | chr5_3:40283107-40283126 | None:intergenic | 20.0% |
| !! | ATTTATACCCTACTATAAAT+AGG | + | chr5_3:40283108-40283127 | None:intergenic | 20.0% |
| !! | CAATTAATACTTACATTCAA+TGG | + | chr5_3:40284466-40284485 | None:intergenic | 20.0% |
| !!! | TAAGTATTAATTGACTCATT+AGG | - | chr5_3:40284473-40284492 | Msa0811120:intron | 20.0% |
| !!! | AAGTATTAATTGACTCATTA+GGG | - | chr5_3:40284474-40284493 | Msa0811120:intron | 20.0% |
| !!! | GATATTATTTTCATTGATTC+AGG | - | chr5_3:40284655-40284674 | Msa0811120:intron | 20.0% |
| !! | ATTTAGTTAACTACCAAAAA+AGG | + | chr5_3:40284789-40284808 | None:intergenic | 20.0% |
| !!! | TAGTTAACTAAATGTGTTTT+AGG | - | chr5_3:40284796-40284815 | Msa0811120:three_prime_UTR | 20.0% |
| !! | CTACCAGAATAATATTTATT+CGG | + | chr5_3:40285405-40285424 | None:intergenic | 20.0% |
| !! | ATTATATCCTCTTACTTTAA+AGG | + | chr5_3:40285508-40285527 | None:intergenic | 20.0% |
| !! | CAGTATGAAAAATCTTATAT+GGG | + | chr5_3:40285856-40285875 | None:intergenic | 20.0% |
| !! | TCAGTATGAAAAATCTTATA+TGG | + | chr5_3:40285857-40285876 | None:intergenic | 20.0% |
| !! | TCTTAAACTATTGAAATTAC+AGG | - | chr5_3:40286022-40286041 | Msa0811120:three_prime_UTR | 20.0% |
| !! | TTCTCTATGATGTAATATAT+AGG | - | chr5_3:40286118-40286137 | Msa0811120:three_prime_UTR | 20.0% |
| !! | AGATAAATGTAATGTTTGAT+TGG | - | chr5_3:40286726-40286745 | Msa0811120:intron | 20.0% |
| !! | GATAAATGTAATGTTTGATT+GGG | - | chr5_3:40286727-40286746 | Msa0811120:intron | 20.0% |
| !! | AATATTTAGTAATCCCAAAA+TGG | + | chr5_3:40286810-40286829 | None:intergenic | 20.0% |
| !!! | TTGATTTTAATTGTTACTCT+TGG | - | chr5_3:40286881-40286900 | Msa0811120:CDS | 20.0% |
| !!! | AATTTTTCCTAAAGCAAAAA+AGG | + | chr5_3:40286938-40286957 | None:intergenic | 20.0% |
| !!! | GTTTTTTGATAGATTGTCTT+TGG | + | chr5_3:40280292-40280311 | None:intergenic | 25.0% |
| !! | ATGTTGATAGAAGATTTGAT+AGG | - | chr5_3:40280571-40280590 | Msa0811120:three_prime_UTR | 25.0% |
| !! | TGTTGATAGAAGATTTGATA+GGG | - | chr5_3:40280572-40280591 | Msa0811120:three_prime_UTR | 25.0% |
| ! | TTTGTTTAGTGGTATCATAA+TGG | - | chr5_3:40281280-40281299 | Msa0811120:intron | 25.0% |
| !! | TAGTATCATGTACATTTTGT+AGG | - | chr5_3:40281429-40281448 | Msa0811120:three_prime_UTR | 25.0% |
| !!! | AAAACTTGTTGCTATCTTTA+TGG | - | chr5_3:40281835-40281854 | Msa0811120:intron | 25.0% |
| !!! | AAACTTGTTGCTATCTTTAT+GGG | - | chr5_3:40281836-40281855 | Msa0811120:intron | 25.0% |
| !!! | TTTATTTATGTGTTTGGTGT+TGG | - | chr5_3:40282042-40282061 | Msa0811120:intron | 25.0% |
| !! | AGGTAAATCATTTTGTTACA+TGG | - | chr5_3:40282220-40282239 | Msa0811120:intron | 25.0% |
| ! | TTTGTTACATGGTGATTATT+TGG | - | chr5_3:40282231-40282250 | Msa0811120:intron | 25.0% |
| ! | GAATAACAATCAATATCTCA+GGG | + | chr5_3:40282353-40282372 | None:intergenic | 25.0% |
| ! | TGAATAACAATCAATATCTC+AGG | + | chr5_3:40282354-40282373 | None:intergenic | 25.0% |
| !! | TATTGATTGTTATTCACTGT+TGG | - | chr5_3:40282358-40282377 | Msa0811120:intron | 25.0% |
| !! | GCTCATATATATTTGGATTT+TGG | - | chr5_3:40282663-40282682 | Msa0811120:three_prime_UTR | 25.0% |
| ! | AATTGTTTAATTCCTTTGTC+AGG | - | chr5_3:40282754-40282773 | Msa0811120:intron | 25.0% |
| ! | ATTGTTTAATTCCTTTGTCA+GGG | - | chr5_3:40282755-40282774 | Msa0811120:intron | 25.0% |
| ! | CTCAAATGAGAAATTTGAAA+TGG | + | chr5_3:40282870-40282889 | None:intergenic | 25.0% |
| ! | TAAAACAGTTGGAAGTTAAA+TGG | + | chr5_3:40283006-40283025 | None:intergenic | 25.0% |
| !!! | AATAGTAGTTCTAAAACAGT+TGG | + | chr5_3:40283017-40283036 | None:intergenic | 25.0% |
| !! | TGATGCATTTTTGTTCATTT+AGG | - | chr5_3:40283064-40283083 | Msa0811120:intron | 25.0% |
| ! | ATTTGAACCCTATTTATAGT+AGG | - | chr5_3:40283097-40283116 | Msa0811120:intron | 25.0% |
| ! | TTTGAACCCTATTTATAGTA+GGG | - | chr5_3:40283098-40283117 | Msa0811120:intron | 25.0% |
| !!! | GTATAAATAGTTTTACCAAG+TGG | - | chr5_3:40283120-40283139 | Msa0811120:intron | 25.0% |
| !! | ATACTCCATATGAAACTTTT+GGG | + | chr5_3:40283277-40283296 | None:intergenic | 25.0% |
| ! | AGCAAATCAGTTTCTTTATT+TGG | + | chr5_3:40283444-40283463 | None:intergenic | 25.0% |
| ! | TCTCATTGTAAGAAATTTCT+TGG | + | chr5_3:40283684-40283703 | None:intergenic | 25.0% |
| ! | TTTATTTATGCAGGATCATT+TGG | - | chr5_3:40283963-40283982 | Msa0811120:three_prime_UTR | 25.0% |
| ! | TTATTTATGCAGGATCATTT+GGG | - | chr5_3:40283964-40283983 | Msa0811120:three_prime_UTR | 25.0% |
| !! | TTTTTCTTCATGCTGAAATT+TGG | - | chr5_3:40284038-40284057 | Msa0811120:three_prime_UTR | 25.0% |
| ! | GAGTTAATTATGCTTTGTAA+TGG | - | chr5_3:40284102-40284121 | Msa0811120:three_prime_UTR | 25.0% |
| ! | TGTAGTTAATTGCATGAATA+AGG | - | chr5_3:40284182-40284201 | Msa0811120:intron | 25.0% |
| !!! | CTTCTCTGTTTTTATCATTT+TGG | - | chr5_3:40284239-40284258 | Msa0811120:three_prime_UTR | 25.0% |
| !!! | ATCTGATGTTTTAAAATTGC+AGG | - | chr5_3:40284269-40284288 | Msa0811120:three_prime_UTR | 25.0% |
| ! | TCTGAGTTATGCTTTAATTA+AGG | - | chr5_3:40284423-40284442 | Msa0811120:intron | 25.0% |
| ! | CTGAGTTATGCTTTAATTAA+GGG | - | chr5_3:40284424-40284443 | Msa0811120:intron | 25.0% |
| ! | TGAGTTATGCTTTAATTAAG+GGG | - | chr5_3:40284425-40284444 | Msa0811120:intron | 25.0% |
| !! | TTTTTCTCAAATTTATGCTC+AGG | - | chr5_3:40285215-40285234 | Msa0811120:intron | 25.0% |
| ! | TAATATTTATTCGGAAGCAA+TGG | + | chr5_3:40285396-40285415 | None:intergenic | 25.0% |
| ! | CTTCCGAATAAATATTATTC+TGG | - | chr5_3:40285399-40285418 | Msa0811120:intron | 25.0% |
| ! | ATAAAACAACTTCAGAAATC+AGG | + | chr5_3:40285531-40285550 | None:intergenic | 25.0% |
| ! | TCAATAAGGAGAGATTAAAA+TGG | + | chr5_3:40285766-40285785 | None:intergenic | 25.0% |
| !!! | TTGTTTTGACAACTTCAATA+AGG | + | chr5_3:40285780-40285799 | None:intergenic | 25.0% |
| ! | AATCTTATATGGGAAATAGT+GGG | + | chr5_3:40285846-40285865 | None:intergenic | 25.0% |
| ! | AAATCTTATATGGGAAATAG+TGG | + | chr5_3:40285847-40285866 | None:intergenic | 25.0% |
| ! | TCATACTGAATTGAAAAATG+TGG | - | chr5_3:40285868-40285887 | Msa0811120:intron | 25.0% |
| ! | ATTTATTGATCACCACTATA+TGG | - | chr5_3:40285951-40285970 | Msa0811120:three_prime_UTR | 25.0% |
| ! | TCTTAATGATGACAACTAAA+TGG | - | chr5_3:40286061-40286080 | Msa0811120:three_prime_UTR | 25.0% |
| !!! | ACAAAGTGTTTTATAATACC+CGG | - | chr5_3:40286085-40286104 | Msa0811120:three_prime_UTR | 25.0% |
| ! | CCTGCAAAATATTAATAGAA+TGG | + | chr5_3:40286167-40286186 | None:intergenic | 25.0% |
| !! | CCATTCTATTAATATTTTGC+AGG | - | chr5_3:40286164-40286183 | Msa0811120:intron | 25.0% |
| !! | AAGTCTGATGTTTATAGTTT+TGG | - | chr5_3:40286300-40286319 | Msa0811120:intron | 25.0% |
| !!! | GTTGAGTAATTATTTTTGTC+TGG | - | chr5_3:40286392-40286411 | Msa0811120:intron | 25.0% |
| !!! | TGTTTACTTGCTTTATTTTC+AGG | - | chr5_3:40286604-40286623 | Msa0811120:intron | 25.0% |
| ! | GAATTCCTAGTTTATTAGAA+AGG | + | chr5_3:40286684-40286703 | None:intergenic | 25.0% |
| ! | TTCTAATAAACTAGGAATTC+TGG | - | chr5_3:40286684-40286703 | Msa0811120:intron | 25.0% |
| !! | GTCATATCAAATTCTGTTTT+TGG | + | chr5_3:40286851-40286870 | None:intergenic | 25.0% |
| !!! | TGCTTTAGGAAAAATTATCA+TGG | - | chr5_3:40286942-40286961 | Msa0811120:CDS | 25.0% |
| !! | TAAAATATGTTGGCTATGTA+TGG | - | chr5_3:40287253-40287272 | Msa0811120:CDS | 25.0% |
| !! | AAAAAAAAAAGGTGCGAATA+TGG | - | chr5_3:40287433-40287452 | Msa0811120:CDS | 25.0% |
| !! | AAAAAAAAAGGTGCGAATAT+GGG | - | chr5_3:40287434-40287453 | Msa0811120:CDS | 25.0% |
| !! | TTGTAATTGTAAGTGGTTTT+TGG | - | chr5_3:40287461-40287480 | Msa0811120:CDS | 25.0% |
| AAAATCAGCAGTCAAATCAA+CGG | - | chr5_3:40280215-40280234 | Msa0811120:three_prime_UTR | 30.0% | |
| !!! | GTTTTGAAACTTTTTACCGT+CGG | + | chr5_3:40280337-40280356 | None:intergenic | 30.0% |
| CATGTAGAATATGATCTGAT+CGG | + | chr5_3:40280476-40280495 | None:intergenic | 30.0% | |
| AGATCATATTCTACATGAAG+AGG | - | chr5_3:40280479-40280498 | Msa0811120:three_prime_UTR | 30.0% | |
| CTACAAATGAAGTTACAACA+AGG | - | chr5_3:40280724-40280743 | Msa0811120:intron | 30.0% | |
| GAATGAACAAGAAGAAGAAA+AGG | - | chr5_3:40280746-40280765 | Msa0811120:intron | 30.0% | |
| ! | TTGATACTGGATTAGAAACA+TGG | - | chr5_3:40281004-40281023 | Msa0811120:intron | 30.0% |
| ! | TGATACTGGATTAGAAACAT+GGG | - | chr5_3:40281005-40281024 | Msa0811120:intron | 30.0% |
| TTAGTGCATGTTTGATATCA+AGG | - | chr5_3:40281087-40281106 | Msa0811120:intron | 30.0% | |
| ! | GATATCAAGGTGTATTTTGT+CGG | - | chr5_3:40281100-40281119 | Msa0811120:intron | 30.0% |
| !!! | ACTCATCATGTTTTGTTTAG+TGG | - | chr5_3:40281269-40281288 | Msa0811120:intron | 30.0% |
| AGCAAAACCTACAATCAATA+AGG | + | chr5_3:40281330-40281349 | None:intergenic | 30.0% | |
| !! | GGTTTTGTGATTTTTGTATC+AGG | - | chr5_3:40281535-40281554 | Msa0811120:intron | 30.0% |
| !! | AACTTGTTGCTATCTTTATG+GGG | - | chr5_3:40281837-40281856 | Msa0811120:intron | 30.0% |
| TAGACAATTGTGATCTAGAT+CGG | - | chr5_3:40281941-40281960 | Msa0811120:intron | 30.0% | |
| TTACATGGTGATTATTTGGA+TGG | - | chr5_3:40282235-40282254 | Msa0811120:intron | 30.0% | |
| AATACCTATCATATAAGAGG+AGG | - | chr5_3:40282309-40282328 | Msa0811120:intron | 30.0% | |
| ATACCTATCATATAAGAGGA+GGG | - | chr5_3:40282310-40282329 | Msa0811120:intron | 30.0% | |
| TTTGATCTTCACAAGAATAG+AGG | + | chr5_3:40282481-40282500 | None:intergenic | 30.0% | |
| ! | TGAGAAATTTGAAATGGAGA+AGG | + | chr5_3:40282864-40282883 | None:intergenic | 30.0% |
| TCTAACAATCAACTGTATTC+AGG | - | chr5_3:40282957-40282976 | Msa0811120:intron | 30.0% | |
| ! | TACTCCATATGAAACTTTTG+GGG | + | chr5_3:40283276-40283295 | None:intergenic | 30.0% |
| ! | CATACTCCATATGAAACTTT+TGG | + | chr5_3:40283278-40283297 | None:intergenic | 30.0% |
| CAAAAGTTTCATATGGAGTA+TGG | - | chr5_3:40283276-40283295 | Msa0811120:intron | 30.0% | |
| TTACATGACATTCCATTTGT+TGG | - | chr5_3:40283640-40283659 | Msa0811120:intron | 30.0% | |
| ACTGAATCTTTACCAACAAA+TGG | + | chr5_3:40283655-40283674 | None:intergenic | 30.0% | |
| TTACAATGAGATCATTGCAA+AGG | - | chr5_3:40283693-40283712 | Msa0811120:intron | 30.0% | |
| TACAATGAGATCATTGCAAA+GGG | - | chr5_3:40283694-40283713 | Msa0811120:intron | 30.0% | |
| ! | GGTTCAAGATTCACATATTT+TGG | + | chr5_3:40283799-40283818 | None:intergenic | 30.0% |
| !! | TACTGCTCTTTTATTTATGC+AGG | - | chr5_3:40283954-40283973 | Msa0811120:three_prime_UTR | 30.0% |
| AATAAAATATCCAGTCGTCA+TGG | + | chr5_3:40284216-40284235 | None:intergenic | 30.0% | |
| GGTCTATCTATTTATTGCAT+AGG | - | chr5_3:40284399-40284418 | Msa0811120:intron | 30.0% | |
| !!! | TTAATTAAGGGGTGTTTTTC+TGG | - | chr5_3:40284436-40284455 | Msa0811120:intron | 30.0% |
| !!! | TCAGTATTTTGACTTCTATG+AGG | - | chr5_3:40284618-40284637 | Msa0811120:intron | 30.0% |
| ! | ATATCGTTTTCTCTCATTGT+AGG | - | chr5_3:40285019-40285038 | Msa0811120:intron | 30.0% |
| !! | GAAAGTATTTGCCTTAAATC+TGG | + | chr5_3:40285259-40285278 | None:intergenic | 30.0% |
| ! | ATCCTCTTACTTTAAAGGAT+GGG | + | chr5_3:40285503-40285522 | None:intergenic | 30.0% |
| ! | TATCCTCTTACTTTAAAGGA+TGG | + | chr5_3:40285504-40285523 | None:intergenic | 30.0% |
| !! | GTTTTATTACCATAGAGATC+CGG | - | chr5_3:40285544-40285563 | Msa0811120:three_prime_UTR | 30.0% |
| AATAATTGACCGACATAAAC+CGG | + | chr5_3:40285566-40285585 | None:intergenic | 30.0% | |
| ! | TGGTAAGTATGTACTCTTTT+TGG | - | chr5_3:40285601-40285620 | Msa0811120:three_prime_UTR | 30.0% |
| ! | ATGAGAGGGTGTATATAAAT+TGG | + | chr5_3:40285642-40285661 | None:intergenic | 30.0% |
| TTATCAAACAAGCTCTTTCT+TGG | + | chr5_3:40285700-40285719 | None:intergenic | 30.0% | |
| ! | AAAATGTGGAGATCATCTTT+TGG | - | chr5_3:40285882-40285901 | Msa0811120:three_prime_UTR | 30.0% |
| GAAAATGTGCAAGATAATGA+GGG | - | chr5_3:40285973-40285992 | Msa0811120:three_prime_UTR | 30.0% | |
| !!! | AATTTTATTTTCAGCCTGAG+TGG | - | chr5_3:40286238-40286257 | Msa0811120:intron | 30.0% |
| ! | GTTTTCAATATGTTCACACA+TGG | - | chr5_3:40286629-40286648 | Msa0811120:intron | 30.0% |
| ATTTGTCCAAATTCTATGGT+TGG | - | chr5_3:40286654-40286673 | Msa0811120:intron | 30.0% | |
| GATAGCCTTTCTAATAAACT+AGG | - | chr5_3:40286676-40286695 | Msa0811120:intron | 30.0% | |
| ! | TGTTTGATTGGGCTTAATTT+TGG | - | chr5_3:40286738-40286757 | Msa0811120:intron | 30.0% |
| CTATTAGTATGTTGATCAGA+TGG | - | chr5_3:40286781-40286800 | Msa0811120:intron | 30.0% | |
| TTTCTGTCGCTAAAATATGT+TGG | - | chr5_3:40287243-40287262 | Msa0811120:CDS | 30.0% | |
| ! | TACTAGTTTATGACCAACAA+GGG | + | chr5_3:40287304-40287323 | None:intergenic | 30.0% |
| ! | ATACTAGTTTATGACCAACA+AGG | + | chr5_3:40287305-40287324 | None:intergenic | 30.0% |
| ! | TGGTCATAAACTAGTATTGA+TGG | - | chr5_3:40287308-40287327 | Msa0811120:CDS | 30.0% |
| !! | TAGTATTGATGGAACCTTAA+TGG | - | chr5_3:40287319-40287338 | Msa0811120:intron | 30.0% |
| TCATGCTAACACATTTCATA+AGG | - | chr5_3:40287368-40287387 | Msa0811120:intron | 30.0% | |
| CATGCTAACACATTTCATAA+GGG | - | chr5_3:40287369-40287388 | Msa0811120:intron | 30.0% | |
| AAAAAGTAAGTTGCTCTGTG+AGG | + | chr5_3:40280126-40280145 | None:intergenic | 35.0% | |
| !!! | GAGCAACTTACTTTTTTCCT+AGG | - | chr5_3:40280130-40280149 | Msa0811120:three_prime_UTR | 35.0% |
| ! | GTAGTAGAGTTTGAGCTTTT+CGG | + | chr5_3:40280270-40280289 | None:intergenic | 35.0% |
| ATCAAAAAACTCCGCTGTTT+CGG | - | chr5_3:40280302-40280321 | Msa0811120:three_prime_UTR | 35.0% | |
| ! | AAATTGCAGCGTTTTGTGAT+TGG | - | chr5_3:40280367-40280386 | Msa0811120:three_prime_UTR | 35.0% |
| CTTTCTTTCTTATCAACCCT+TGG | - | chr5_3:40280861-40280880 | Msa0811120:intron | 35.0% | |
| TTTCTTATCAACCCTTGGTT+CGG | - | chr5_3:40280866-40280885 | Msa0811120:intron | 35.0% | |
| AATCAGTTTCTCGTCGTTTA+TGG | - | chr5_3:40281034-40281053 | Msa0811120:intron | 35.0% | |
| ATCAGTTTCTCGTCGTTTAT+GGG | - | chr5_3:40281035-40281054 | Msa0811120:intron | 35.0% | |
| ! | TAAGTGCATGTTTGGTAACA+CGG | + | chr5_3:40281170-40281189 | None:intergenic | 35.0% |
| ATTCGATCTAAGTGCATGTT+TGG | + | chr5_3:40281178-40281197 | None:intergenic | 35.0% | |
| !! | TGGATTTGTTAGAATTAGGG+TGG | - | chr5_3:40281300-40281319 | Msa0811120:intron | 35.0% |
| ! | TGGATCACCTTATTGATTGT+AGG | - | chr5_3:40281320-40281339 | Msa0811120:intron | 35.0% |
| TGCATGTGTGATATCATTGT+GGG | + | chr5_3:40281395-40281414 | None:intergenic | 35.0% | |
| TTGCATGTGTGATATCATTG+TGG | + | chr5_3:40281396-40281415 | None:intergenic | 35.0% | |
| GAGATTGAGATCGATAATGA+TGG | - | chr5_3:40281508-40281527 | Msa0811120:three_prime_UTR | 35.0% | |
| ! | GAGATCGATAATGATGGTTT+TGG | - | chr5_3:40281514-40281533 | Msa0811120:three_prime_UTR | 35.0% |
| ! | TGATTTTTGTATCAGGTGAC+AGG | - | chr5_3:40281542-40281561 | Msa0811120:intron | 35.0% |
| GAATTTCCTTCCTACATTGA+TGG | - | chr5_3:40281664-40281683 | Msa0811120:intron | 35.0% | |
| ACTTCCAAAGAACTCTCATT+GGG | + | chr5_3:40281707-40281726 | None:intergenic | 35.0% | |
| GATCACAATTGTCTAGATCA+GGG | + | chr5_3:40281936-40281955 | None:intergenic | 35.0% | |
| AGATCACAATTGTCTAGATC+AGG | + | chr5_3:40281937-40281956 | None:intergenic | 35.0% | |
| AGACAATTGTGATCTAGATC+GGG | - | chr5_3:40281942-40281961 | Msa0811120:intron | 35.0% | |
| !! | TTGGTGTTGGATGTATGAAA+AGG | - | chr5_3:40282055-40282074 | Msa0811120:intron | 35.0% |
| ! | TGGTGTTGGATGTATGAAAA+GGG | - | chr5_3:40282056-40282075 | Msa0811120:intron | 35.0% |
| !! | TGTTTTGTTGATGCAGAGAT+TGG | - | chr5_3:40282389-40282408 | Msa0811120:intron | 35.0% |
| TTGTGAAGATCAAAGATGAC+AGG | - | chr5_3:40282487-40282506 | Msa0811120:intron | 35.0% | |
| AGTATGTTGTTGACCTTGTT+GGG | - | chr5_3:40282778-40282797 | Msa0811120:three_prime_UTR | 35.0% | |
| CACATATGCTCCATTAATTG+AGG | + | chr5_3:40282832-40282851 | None:intergenic | 35.0% | |
| TCAACTGTATTCAGGTATGT+TGG | - | chr5_3:40282965-40282984 | Msa0811120:three_prime_UTR | 35.0% | |
| CAACTGTATTCAGGTATGTT+GGG | - | chr5_3:40282966-40282985 | Msa0811120:three_prime_UTR | 35.0% | |
| TTCATACTGAAGAAACCACT+TGG | + | chr5_3:40283138-40283157 | None:intergenic | 35.0% | |
| GCAATGGAAAATGAAACATG+AGG | + | chr5_3:40283254-40283273 | None:intergenic | 35.0% | |
| !!! | ATATGAAACTTTTGGGGCAA+TGG | + | chr5_3:40283270-40283289 | None:intergenic | 35.0% |
| ATTGCCCCAAAAGTTTCATA+TGG | - | chr5_3:40283269-40283288 | Msa0811120:intron | 35.0% | |
| GTACTGTATGATCTAAGGAT+AGG | + | chr5_3:40283327-40283346 | None:intergenic | 35.0% | |
| ! | GTTGCTACTCAATCTTTTAC+AGG | - | chr5_3:40283399-40283418 | Msa0811120:three_prime_UTR | 35.0% |
| TTCAAGCCAAAAGGAATTAC+AGG | + | chr5_3:40283528-40283547 | None:intergenic | 35.0% | |
| !!! | GTAATTCCTTTTGGCTTGAA+AGG | - | chr5_3:40283528-40283547 | Msa0811120:intron | 35.0% |
| GTCATGTAATAATGCTTCAG+AGG | + | chr5_3:40283629-40283648 | None:intergenic | 35.0% | |
| ! | AGAAAATCGACTTCATAACC+AGG | - | chr5_3:40283759-40283778 | Msa0811120:intron | 35.0% |
| ! | GAAAATCGACTTCATAACCA+GGG | - | chr5_3:40283760-40283779 | Msa0811120:intron | 35.0% |
| GATTAAACAAATGTTACGCG+AGG | - | chr5_3:40284378-40284397 | Msa0811120:intron | 35.0% | |
| TCTGTCACTATAGATAGATG+AGG | + | chr5_3:40284746-40284765 | None:intergenic | 35.0% | |
| ! | CCAAAAAAGGTTGATTACCT+GGG | + | chr5_3:40284776-40284795 | None:intergenic | 35.0% |
| ! | ACCAAAAAAGGTTGATTACC+TGG | + | chr5_3:40284777-40284796 | None:intergenic | 35.0% |
| TTTCTCTCATTGTAGGCTAA+AGG | - | chr5_3:40285026-40285045 | Msa0811120:intron | 35.0% | |
| TTCTCTCATTGTAGGCTAAA+GGG | - | chr5_3:40285027-40285046 | Msa0811120:intron | 35.0% | |
| CTTATATATGGTAACTCGAC+AGG | + | chr5_3:40285461-40285480 | None:intergenic | 35.0% | |
| ! | GACGAAGGTTTGCTTATATA+TGG | + | chr5_3:40285473-40285492 | None:intergenic | 35.0% |
| ! | TCCTCTTACTTTAAAGGATG+GGG | + | chr5_3:40285502-40285521 | None:intergenic | 35.0% |
| TCAATTATTTGATGCTGCCT+TGG | - | chr5_3:40285577-40285596 | Msa0811120:three_prime_UTR | 35.0% | |
| CAATTATTTGATGCTGCCTT+GGG | - | chr5_3:40285578-40285597 | Msa0811120:three_prime_UTR | 35.0% | |
| ATCCTTAATGCTTGCATTTC+TGG | - | chr5_3:40285660-40285679 | Msa0811120:intron | 35.0% | |
| ATCCAGAAATGCAAGCATTA+AGG | + | chr5_3:40285665-40285684 | None:intergenic | 35.0% | |
| ! | ACAAGCTCTTTCTTGGTAAT+TGG | + | chr5_3:40285693-40285712 | None:intergenic | 35.0% |
| AGGAGAGATTAAAATGGTAG+TGG | + | chr5_3:40285760-40285779 | None:intergenic | 35.0% | |
| ! | CTTGCACATTTTCCATATAG+TGG | + | chr5_3:40285966-40285985 | None:intergenic | 35.0% |
| GGAAAATGTGCAAGATAATG+AGG | - | chr5_3:40285972-40285991 | Msa0811120:three_prime_UTR | 35.0% | |
| TGCAAGATAATGAGGGATAA+GGG | - | chr5_3:40285980-40285999 | Msa0811120:three_prime_UTR | 35.0% | |
| !!! | ATAGTTTTGGTGTCATCTTG+TGG | - | chr5_3:40286313-40286332 | Msa0811120:intron | 35.0% |
| !!! | TAGTTTTGGTGTCATCTTGT+GGG | - | chr5_3:40286314-40286333 | Msa0811120:intron | 35.0% |
| ATTACTCAACGAGTTTACCT+GGG | + | chr5_3:40286382-40286401 | None:intergenic | 35.0% | |
| AATTACTCAACGAGTTTACC+TGG | + | chr5_3:40286383-40286402 | None:intergenic | 35.0% | |
| ! | TGCAATGTTTGAAACATGCA+AGG | + | chr5_3:40286418-40286437 | None:intergenic | 35.0% |
| TAATCTTCATGTGTATCCTC+AGG | - | chr5_3:40286482-40286501 | Msa0811120:intron | 35.0% | |
| GGTCATTTGTCCAAATTCTA+TGG | - | chr5_3:40286650-40286669 | Msa0811120:intron | 35.0% | |
| !! | TGATCAGATGGATTCCATTT+TGG | - | chr5_3:40286793-40286812 | Msa0811120:intron | 35.0% |
| !! | GATCAGATGGATTCCATTTT+GGG | - | chr5_3:40286794-40286813 | Msa0811120:intron | 35.0% |
| TACCAACTTCAGATTCTCTA+AGG | - | chr5_3:40286908-40286927 | Msa0811120:CDS | 35.0% | |
| ! | TTCCTTAGAGAATCTGAAGT+TGG | + | chr5_3:40286913-40286932 | None:intergenic | 35.0% |
| !!! | AGGAAGACCTTTTTTGCTTT+AGG | - | chr5_3:40286928-40286947 | Msa0811120:CDS | 35.0% |
| TGACTTTAGCAGCTTCTTTA+TGG | + | chr5_3:40287128-40287147 | None:intergenic | 35.0% | |
| GGGATTGTTGTAATTGTAAG+TGG | - | chr5_3:40287454-40287473 | Msa0811120:CDS | 35.0% | |
| CTACAAGATAAAAGAGCTTG+AGG | + | chr5_3:40287488-40287507 | None:intergenic | 35.0% | |
| !! | CTTTTCTCTGGAAATTGCCT+AGG | + | chr5_3:40280150-40280169 | None:intergenic | 40.0% |
| CTAGGCAATTTCCAGAGAAA+AGG | - | chr5_3:40280148-40280167 | Msa0811120:three_prime_UTR | 40.0% | |
| ! | GATTCATCGAACCTTTTCTC+TGG | + | chr5_3:40280162-40280181 | None:intergenic | 40.0% |
| GAATATGATCTGATCGGTGA+CGG | + | chr5_3:40280470-40280489 | None:intergenic | 40.0% | |
| TATTCTACATGAAGAGGACG+AGG | - | chr5_3:40280485-40280504 | Msa0811120:three_prime_UTR | 40.0% | |
| CGATGAGAAGAACTATGCTA+AGG | - | chr5_3:40280794-40280813 | Msa0811120:intron | 40.0% | |
| CTATGAACTACAACAAGCCT+TGG | - | chr5_3:40280830-40280849 | Msa0811120:intron | 40.0% | |
| CCAGTATCAAAAGTGAGAAC+CGG | + | chr5_3:40280994-40281013 | None:intergenic | 40.0% | |
| CCATAATCATACTGCGCTAA+TGG | + | chr5_3:40281368-40281387 | None:intergenic | 40.0% | |
| CCATTAGCGCAGTATGATTA+TGG | - | chr5_3:40281365-40281384 | Msa0811120:three_prime_UTR | 40.0% | |
| TACACTGACAAGATTGCAGA+TGG | - | chr5_3:40281575-40281594 | Msa0811120:intron | 40.0% | |
| !! | TACATTGATGGCGCTTAAAG+CGG | - | chr5_3:40281676-40281695 | Msa0811120:intron | 40.0% |
| TGAACCCAATGAGAGTTCTT+TGG | - | chr5_3:40281700-40281719 | Msa0811120:intron | 40.0% | |
| CACTTCCAAAGAACTCTCAT+TGG | + | chr5_3:40281708-40281727 | None:intergenic | 40.0% | |
| GATTCTTATTGATAGACGCG+AGG | - | chr5_3:40281727-40281746 | Msa0811120:intron | 40.0% | |
| ! | AAGCTTTTCAACAAGCACCA+AGG | + | chr5_3:40281813-40281832 | None:intergenic | 40.0% |
| ! | TTGGTGCTTGTTGAAAAGCT+TGG | - | chr5_3:40281812-40281831 | Msa0811120:intron | 40.0% |
| GACAATTGTGATCTAGATCG+GGG | - | chr5_3:40281943-40281962 | Msa0811120:intron | 40.0% | |
| ACAATTGTGATCTAGATCGG+GGG | - | chr5_3:40281944-40281963 | Msa0811120:intron | 40.0% | |
| ! | GGTGTTGGATGTATGAAAAG+GGG | - | chr5_3:40282057-40282076 | Msa0811120:intron | 40.0% |
| TCTGCAAAAAAGGTGGAAGA+TGG | - | chr5_3:40282104-40282123 | Msa0811120:intron | 40.0% | |
| ACACCCTCCTCTTATATGAT+AGG | + | chr5_3:40282316-40282335 | None:intergenic | 40.0% | |
| TATCATATAAGAGGAGGGTG+TGG | - | chr5_3:40282315-40282334 | Msa0811120:intron | 40.0% | |
| TTTGTTGATGCAGAGATTGG+CGG | - | chr5_3:40282392-40282411 | Msa0811120:intron | 40.0% | |
| !! | CAGAGATTGGCGGATTATAT+AGG | - | chr5_3:40282402-40282421 | Msa0811120:intron | 40.0% |
| AACTGTCAAGGTTAGTGCAA+CGG | - | chr5_3:40282511-40282530 | Msa0811120:intron | 40.0% | |
| !! | TGGCTTTGATCATCTTCAAC+CGG | - | chr5_3:40282591-40282610 | Msa0811120:intron | 40.0% |
| AACAACATACTCCCTGACAA+AGG | + | chr5_3:40282769-40282788 | None:intergenic | 40.0% | |
| GAGTATGTTGTTGACCTTGT+TGG | - | chr5_3:40282777-40282796 | Msa0811120:three_prime_UTR | 40.0% | |
| GTATGTTGTTGACCTTGTTG+GGG | - | chr5_3:40282779-40282798 | Msa0811120:three_prime_UTR | 40.0% | |
| GGGAACCAGGAAATATTACT+GGG | - | chr5_3:40282799-40282818 | Msa0811120:three_prime_UTR | 40.0% | |
| GCTCCATTAATTGAGGAATC+TGG | + | chr5_3:40282825-40282844 | None:intergenic | 40.0% | |
| AAAATCTCAATTGCCCTACG+TGG | - | chr5_3:40282890-40282909 | Msa0811120:intron | 40.0% | |
| CAGTTGGAAGTTAAATGGTC+AGG | + | chr5_3:40283001-40283020 | None:intergenic | 40.0% | |
| AGTTTCATATGGAGTATGGC+TGG | - | chr5_3:40283280-40283299 | Msa0811120:intron | 40.0% | |
| CGACAGTACTGTATGATCTA+AGG | + | chr5_3:40283332-40283351 | None:intergenic | 40.0% | |
| !!! | GACCAGTCAGATTTTGAAGT+TGG | - | chr5_3:40283371-40283390 | Msa0811120:intron | 40.0% |
| GACCAACTTCAAAATCTGAC+TGG | + | chr5_3:40283376-40283395 | None:intergenic | 40.0% | |
| !! | GCTTCAGTTGATAAAACTCC+TGG | - | chr5_3:40283489-40283508 | Msa0811120:intron | 40.0% |
| !! | TCAGTTGATAAAACTCCTGG+AGG | - | chr5_3:40283492-40283511 | Msa0811120:intron | 40.0% |
| ! | GAACCACCTGTAATTCCTTT+TGG | - | chr5_3:40283519-40283538 | Msa0811120:intron | 40.0% |
| AAGCCAAAAGGAATTACAGG+TGG | + | chr5_3:40283525-40283544 | None:intergenic | 40.0% | |
| GTAATAATGCTTCAGAGGCT+GGG | + | chr5_3:40283624-40283643 | None:intergenic | 40.0% | |
| TGTAATAATGCTTCAGAGGC+TGG | + | chr5_3:40283625-40283644 | None:intergenic | 40.0% | |
| AAGGGAAGTTCAGTGGTAAA+TGG | - | chr5_3:40283712-40283731 | Msa0811120:intron | 40.0% | |
| AAATGGTATCCAGTCAAAGC+AGG | - | chr5_3:40283729-40283748 | Msa0811120:three_prime_UTR | 40.0% | |
| TCTTGAACCATCACTAGCAA+TGG | - | chr5_3:40283810-40283829 | Msa0811120:intron | 40.0% | |
| !! | CTCATGCTTTGCAGTTTTGA+AGG | - | chr5_3:40283902-40283921 | Msa0811120:three_prime_UTR | 40.0% |
| ! | AAGGAGCATAAATGACGTGA+TGG | - | chr5_3:40283921-40283940 | Msa0811120:three_prime_UTR | 40.0% |
| ACTCTTTCAACTGATCGTCA+TGG | + | chr5_3:40284329-40284348 | None:intergenic | 40.0% | |
| GTTGAAAGAGTTCTTACGAG+AGG | - | chr5_3:40284338-40284357 | Msa0811120:intron | 40.0% | |
| ATTAGGGTGATGAGTTGCTT+TGG | - | chr5_3:40284490-40284509 | Msa0811120:intron | 40.0% | |
| !!! | CCCAGGTAATCAACCTTTTT+TGG | - | chr5_3:40284773-40284792 | Msa0811120:three_prime_UTR | 40.0% |
| !! | AGTGTCTCACTGTTGTTTCT+TGG | - | chr5_3:40284840-40284859 | Msa0811120:three_prime_UTR | 40.0% |
| GTTTATTTCGCCTGATTCAC+AGG | - | chr5_3:40284882-40284901 | Msa0811120:three_prime_UTR | 40.0% | |
| TCCAAGGAGAAGATTACGAA+TGG | - | chr5_3:40284928-40284947 | Msa0811120:three_prime_UTR | 40.0% | |
| TAAGGAGTAACTCAGTTGCT+TGG | + | chr5_3:40285158-40285177 | None:intergenic | 40.0% | |
| TATGCTCAGGTGTGTGATTT+CGG | - | chr5_3:40285228-40285247 | Msa0811120:three_prime_UTR | 40.0% | |
| TTGTCCTCAAAATCTGTTGC+TGG | - | chr5_3:40285279-40285298 | Msa0811120:three_prime_UTR | 40.0% | |
| CTCAAAATCTGTTGCTGGAA+CGG | - | chr5_3:40285284-40285303 | Msa0811120:three_prime_UTR | 40.0% | |
| !! | ACCCCATCCTTTAAAGTAAG+AGG | - | chr5_3:40285498-40285517 | Msa0811120:intron | 40.0% |
| CATAGAGATCCGGTTTATGT+CGG | - | chr5_3:40285554-40285573 | Msa0811120:three_prime_UTR | 40.0% | |
| !! | ACTCTTTTTGGTGTGCTTCA+TGG | - | chr5_3:40285613-40285632 | Msa0811120:three_prime_UTR | 40.0% |
| TGCAAGCATTAAGGATGAGA+GGG | + | chr5_3:40285656-40285675 | None:intergenic | 40.0% | |
| ATGCAAGCATTAAGGATGAG+AGG | + | chr5_3:40285657-40285676 | None:intergenic | 40.0% | |
| !! | GATCATCTTTTGGAGAGTAG+AGG | - | chr5_3:40285892-40285911 | Msa0811120:three_prime_UTR | 40.0% |
| GTGCAAGATAATGAGGGATA+AGG | - | chr5_3:40285979-40285998 | Msa0811120:three_prime_UTR | 40.0% | |
| TTATAATACCCGGACTTGAG+AGG | - | chr5_3:40286095-40286114 | Msa0811120:three_prime_UTR | 40.0% | |
| ! | CAGGTTGAACTTTCACTTCA+CGG | - | chr5_3:40286183-40286202 | Msa0811120:intron | 40.0% |
| ! | TTATTTTCAGCCTGAGTGGA+TGG | - | chr5_3:40286242-40286261 | Msa0811120:intron | 40.0% |
| ACATCAGACTTCTCGTTTGT+AGG | + | chr5_3:40286291-40286310 | None:intergenic | 40.0% | |
| TAGTGACCTTACAACAACCA+TGG | - | chr5_3:40286340-40286359 | Msa0811120:intron | 40.0% | |
| ACCTTACAACAACCATGGAA+TGG | - | chr5_3:40286345-40286364 | Msa0811120:intron | 40.0% | |
| TCCATTCCATGGTTGTTGTA+AGG | + | chr5_3:40286349-40286368 | None:intergenic | 40.0% | |
| CTCCCTTATGGAATCTTGTT+GGG | - | chr5_3:40286572-40286591 | Msa0811120:intron | 40.0% | |
| AGCCCAACAAGATTCCATAA+GGG | + | chr5_3:40286577-40286596 | None:intergenic | 40.0% | |
| GGCTATCCAACCATAGAATT+TGG | + | chr5_3:40286663-40286682 | None:intergenic | 40.0% | |
| CAACTATGCTGGCAAAAGAT+GGG | + | chr5_3:40287102-40287121 | None:intergenic | 40.0% | |
| TCAACTATGCTGGCAAAAGA+TGG | + | chr5_3:40287103-40287122 | None:intergenic | 40.0% | |
| CTTTATGGTCTCAACTATGC+TGG | + | chr5_3:40287113-40287132 | None:intergenic | 40.0% | |
| ATTGGGTGGAATGAACCATA+AGG | - | chr5_3:40287198-40287217 | Msa0811120:CDS | 40.0% | |
| CCAGTTGCAAACAACCATTA+AGG | + | chr5_3:40287336-40287355 | None:intergenic | 40.0% | |
| CCTTAATGGTTGTTTGCAAC+TGG | - | chr5_3:40287333-40287352 | Msa0811120:intron | 40.0% | |
| GGTGAAAAGTTCCGAAACAG+CGG | + | chr5_3:40280316-40280335 | None:intergenic | 45.0% | |
| ! | GTTTCGGAACTTTTCACCGA+CGG | - | chr5_3:40280318-40280337 | Msa0811120:three_prime_UTR | 45.0% |
| ! | TGCAGCGTTTTGTGATTGGT+TGG | - | chr5_3:40280371-40280390 | Msa0811120:three_prime_UTR | 45.0% |
| ACATCAACAGCATCCTTCTC+CGG | + | chr5_3:40280555-40280574 | None:intergenic | 45.0% | |
| TCACTATCGAGATTGTCGAG+TGG | - | chr5_3:40280600-40280619 | Msa0811120:three_prime_UTR | 45.0% | |
| TACAACAAGCCTTGGCAAAG+AGG | - | chr5_3:40280838-40280857 | Msa0811120:intron | 45.0% | |
| GAAAGAAAGCCTCTTTGCCA+AGG | + | chr5_3:40280850-40280869 | None:intergenic | 45.0% | |
| !! | CCGGTTCTCACTTTTGATAC+TGG | - | chr5_3:40280991-40281010 | Msa0811120:intron | 45.0% |
| ! | TGCATGTTTGGTAACACGGT+GGG | + | chr5_3:40281166-40281185 | None:intergenic | 45.0% |
| TGGGAATGAATCCGTACTTG+TGG | - | chr5_3:40281612-40281631 | Msa0811120:intron | 45.0% | |
| GGGAATGAATCCGTACTTGT+GGG | - | chr5_3:40281613-40281632 | Msa0811120:intron | 45.0% | |
| TTGCACATCACCCACAAGTA+CGG | + | chr5_3:40281626-40281645 | None:intergenic | 45.0% | |
| TGCAATGACATGGAGGAAGA+AGG | - | chr5_3:40281641-40281660 | Msa0811120:intron | 45.0% | |
| GCAATGACATGGAGGAAGAA+GGG | - | chr5_3:40281642-40281661 | Msa0811120:intron | 45.0% | |
| TAAGCGCCATCAATGTAGGA+AGG | + | chr5_3:40281673-40281692 | None:intergenic | 45.0% | |
| ! | GCTTTAAGCGCCATCAATGT+AGG | + | chr5_3:40281677-40281696 | None:intergenic | 45.0% |
| ! | TTCTGCTTCTGAGAATGCCT+TGG | - | chr5_3:40281793-40281812 | Msa0811120:intron | 45.0% |
| AGCAAGGGGATCTGCAAAAA+AGG | - | chr5_3:40282094-40282113 | Msa0811120:intron | 45.0% | |
| AAGGGGATCTGCAAAAAAGG+TGG | - | chr5_3:40282097-40282116 | Msa0811120:intron | 45.0% | |
| GGTGGAAGATGGTTAGTAAG+CGG | - | chr5_3:40282115-40282134 | Msa0811120:intron | 45.0% | |
| AGATGGTTAGTAAGCGGTTG+AGG | - | chr5_3:40282121-40282140 | Msa0811120:intron | 45.0% | |
| !! | TCCAGTTGGTAGTTTGTCCA+CGG | - | chr5_3:40282167-40282186 | Msa0811120:intron | 45.0% |
| AAGATGACAGGCAACTGTCA+AGG | - | chr5_3:40282499-40282518 | Msa0811120:intron | 45.0% | |
| GGTTGAAGATGATCAAAGCC+AGG | + | chr5_3:40282592-40282611 | None:intergenic | 45.0% | |
| TATTTCCTGGTTCCCCAACA+AGG | + | chr5_3:40282794-40282813 | None:intergenic | 45.0% | |
| GGGGAACCAGGAAATATTAC+TGG | - | chr5_3:40282798-40282817 | Msa0811120:three_prime_UTR | 45.0% | |
| TCTGGCCCAGTAATATTTCC+TGG | + | chr5_3:40282807-40282826 | None:intergenic | 45.0% | |
| GGGCCAGATTCCTCAATTAA+TGG | - | chr5_3:40282819-40282838 | Msa0811120:three_prime_UTR | 45.0% | |
| ! | CATATGGAGTATGGCTGGTT+AGG | - | chr5_3:40283285-40283304 | Msa0811120:intron | 45.0% |
| CATTGCAAAGGGAAGTTCAG+TGG | - | chr5_3:40283705-40283724 | Msa0811120:intron | 45.0% | |
| CTACTTGTTCCTGCTTTGAC+TGG | + | chr5_3:40283741-40283760 | None:intergenic | 45.0% | |
| AACCATCACTAGCAATGGAC+TGG | - | chr5_3:40283815-40283834 | Msa0811120:intron | 45.0% | |
| !! | TGGACTGGCTTGAGATATCA+TGG | - | chr5_3:40283830-40283849 | Msa0811120:intron | 45.0% |
| !! | GGACTGGCTTGAGATATCAT+GGG | - | chr5_3:40283831-40283850 | Msa0811120:intron | 45.0% |
| AGATATCATGGGATGAGCTG+CGG | - | chr5_3:40283842-40283861 | Msa0811120:intron | 45.0% | |
| ! | ATCAAAGAACGCATTGGTGC+TGG | - | chr5_3:40283865-40283884 | Msa0811120:three_prime_UTR | 45.0% |
| !! | TGAAGAGCACCACATTTGGA+TGG | + | chr5_3:40284703-40284722 | None:intergenic | 45.0% |
| TCCAAATGTGGTGCTCTTCA+TGG | - | chr5_3:40284703-40284722 | Msa0811120:intron | 45.0% | |
| CCAAATGTGGTGCTCTTCAT+GGG | - | chr5_3:40284704-40284723 | Msa0811120:intron | 45.0% | |
| ! | TAGTGACAGAGTATTTGCCC+AGG | - | chr5_3:40284756-40284775 | Msa0811120:intron | 45.0% |
| GCCATTCGTAATCTTCTCCT+TGG | + | chr5_3:40284932-40284951 | None:intergenic | 45.0% | |
| !! | ATTACGAATGGCTCTAGACG+TGG | - | chr5_3:40284940-40284959 | Msa0811120:three_prime_UTR | 45.0% |
| TTGAGATCCCAGTGCACTAT+TGG | + | chr5_3:40285080-40285099 | None:intergenic | 45.0% | |
| ATGCTCAGGTGTGTGATTTC+GGG | - | chr5_3:40285229-40285248 | Msa0811120:three_prime_UTR | 45.0% | |
| TTTCGGGCTGTCCAGATTTA+AGG | - | chr5_3:40285245-40285264 | Msa0811120:three_prime_UTR | 45.0% | |
| ! | CGTTCCAGCAACAGATTTTG+AGG | + | chr5_3:40285286-40285305 | None:intergenic | 45.0% |
| AGGATGGGGTTTAATGACGA+AGG | + | chr5_3:40285488-40285507 | None:intergenic | 45.0% | |
| CGACATAAACCGGATCTCTA+TGG | + | chr5_3:40285556-40285575 | None:intergenic | 45.0% | |
| TTATTTGATGCTGCCTTGGG+TGG | - | chr5_3:40285581-40285600 | Msa0811120:three_prime_UTR | 45.0% | |
| GAGTACATACTTACCACCCA+AGG | + | chr5_3:40285597-40285616 | None:intergenic | 45.0% | |
| ATAGAGAACCTCTCAAGTCC+GGG | + | chr5_3:40286106-40286125 | None:intergenic | 45.0% | |
| CATAGAGAACCTCTCAAGTC+CGG | + | chr5_3:40286107-40286126 | None:intergenic | 45.0% | |
| TCTTCATGTGTATCCTCAGG+TGG | - | chr5_3:40286485-40286504 | Msa0811120:intron | 45.0% | |
| GAGCTGTCGCATTTCAGAAT+AGG | - | chr5_3:40286511-40286530 | Msa0811120:intron | 45.0% | |
| GAGACATTTGGAGGGATAGA+AGG | + | chr5_3:40286540-40286559 | None:intergenic | 45.0% | |
| ATACTGGGGAGACATTTGGA+GGG | + | chr5_3:40286548-40286567 | None:intergenic | 45.0% | |
| AATACTGGGGAGACATTTGG+AGG | + | chr5_3:40286549-40286568 | None:intergenic | 45.0% | |
| TCCAAATGTCTCCCCAGTAT+TGG | - | chr5_3:40286548-40286567 | Msa0811120:intron | 45.0% | |
| CCAACAAGATTCCATAAGGG+AGG | + | chr5_3:40286574-40286593 | None:intergenic | 45.0% | |
| CCTCCCTTATGGAATCTTGT+TGG | - | chr5_3:40286571-40286590 | Msa0811120:intron | 45.0% | |
| CAGCCCAACAAGATTCCATA+AGG | + | chr5_3:40286578-40286597 | None:intergenic | 45.0% | |
| ACCAGCGGATGCGATAAAAA+TGG | - | chr5_3:40287147-40287166 | Msa0811120:CDS | 45.0% | |
| CCAGCGGATGCGATAAAAAT+GGG | - | chr5_3:40287148-40287167 | Msa0811120:CDS | 45.0% | |
| TGGTTCATTCCACCCAATCA+CGG | + | chr5_3:40287196-40287215 | None:intergenic | 45.0% | |
| ACAAGTAACCTGACCCTTGT+TGG | - | chr5_3:40287288-40287307 | Msa0811120:CDS | 45.0% | |
| GTTTATGACCAACAAGGGTC+AGG | + | chr5_3:40287299-40287318 | None:intergenic | 45.0% | |
| !! | TATGTCTCGTGACTTGCTTC+TGG | - | chr5_3:40287536-40287555 | Msa0811120:CDS | 45.0% |
| !!! | GTGACTTGCTTCTGGCTTTT+AGG | - | chr5_3:40287544-40287563 | Msa0811120:CDS | 45.0% |
| !! | GAAAAAAAAAAAAAAAAAAA+AGG | - | chr5_3:40287422-40287441 | Msa0811120:CDS | 5.0% |
| !! | GGTGTTGATGAGGACGATGA+CGG | + | chr5_3:40280428-40280447 | None:intergenic | 50.0% |
| GTCATCGTCCTCATCAACAC+CGG | - | chr5_3:40280427-40280446 | Msa0811120:three_prime_UTR | 50.0% | |
| ! | GGTGATGATGATGCTGATGC+CGG | + | chr5_3:40280449-40280468 | None:intergenic | 50.0% |
| TCTACATGAAGAGGACGAGG+AGG | - | chr5_3:40280488-40280507 | Msa0811120:three_prime_UTR | 50.0% | |
| ! | CGCGACGAGTTTGTTTGCTT+CGG | - | chr5_3:40280632-40280651 | Msa0811120:three_prime_UTR | 50.0% |
| ! | GTGCATGTTTGGTAACACGG+TGG | + | chr5_3:40281167-40281186 | None:intergenic | 50.0% |
| GTGGGTGATGTGCAATGACA+TGG | - | chr5_3:40281631-40281650 | Msa0811120:intron | 50.0% | |
| GGTGATGTGCAATGACATGG+AGG | - | chr5_3:40281634-40281653 | Msa0811120:intron | 50.0% | |
| CAGTGTGTTGTGCTTCCAGT+TGG | - | chr5_3:40282153-40282172 | Msa0811120:intron | 50.0% | |
| !! | CCAGTTGGTAGTTTGTCCAC+GGG | - | chr5_3:40282168-40282187 | Msa0811120:intron | 50.0% |
| GCATCGCGCAATTCTCTTCA+AGG | - | chr5_3:40282200-40282219 | Msa0811120:intron | 50.0% | |
| ! | AGGTTGCAGGTACTGTGCTT+CGG | - | chr5_3:40282446-40282465 | Msa0811120:three_prime_UTR | 50.0% |
| GATGCTGCATCATCCACGTA+GGG | + | chr5_3:40282906-40282925 | None:intergenic | 50.0% | |
| AGATGCTGCATCATCCACGT+AGG | + | chr5_3:40282907-40282926 | None:intergenic | 50.0% | |
| TCGCTGCCTTTCAAGCCAAA+AGG | + | chr5_3:40283537-40283556 | None:intergenic | 50.0% | |
| ! | GACTTCATAACCAGGGTGCT+GGG | - | chr5_3:40283767-40283786 | Msa0811120:intron | 50.0% |
| !! | ACTTCATAACCAGGGTGCTG+GGG | - | chr5_3:40283768-40283787 | Msa0811120:intron | 50.0% |
| AGCCAGTCCATTGCTAGTGA+TGG | + | chr5_3:40283820-40283839 | None:intergenic | 50.0% | |
| CTGCGGATCAAAGAACGCAT+TGG | - | chr5_3:40283859-40283878 | Msa0811120:three_prime_UTR | 50.0% | |
| CTGATCCATGCCATTCAGCA+CGG | + | chr5_3:40283998-40284017 | None:intergenic | 50.0% | |
| ! | AGAGCACCACATTTGGATGG+CGG | + | chr5_3:40284700-40284719 | None:intergenic | 50.0% |
| !! | CCCATGAAGAGCACCACATT+TGG | + | chr5_3:40284707-40284726 | None:intergenic | 50.0% |
| ! | TCTTGGTGTGTCTATCGCAG+AGG | - | chr5_3:40284857-40284876 | Msa0811120:three_prime_UTR | 50.0% |
| TCGTGCATTTCACTGGATGC+TGG | + | chr5_3:40284908-40284927 | None:intergenic | 50.0% | |
| CCTTGGATCGTGCATTTCAC+TGG | + | chr5_3:40284915-40284934 | None:intergenic | 50.0% | |
| CCAGTGAAATGCACGATCCA+AGG | - | chr5_3:40284912-40284931 | Msa0811120:three_prime_UTR | 50.0% | |
| TGAAGCCTCCAATAGTGCAC+TGG | - | chr5_3:40285069-40285088 | Msa0811120:intron | 50.0% | |
| GAAGCCTCCAATAGTGCACT+GGG | - | chr5_3:40285070-40285089 | Msa0811120:intron | 50.0% | |
| AGATCCCAGTGCACTATTGG+AGG | + | chr5_3:40285077-40285096 | None:intergenic | 50.0% | |
| ATGGCTCCAGAGTTTCTTCG+TGG | - | chr5_3:40286261-40286280 | Msa0811120:intron | 50.0% | |
| GGTTCTCCACGAAGAAACTC+TGG | + | chr5_3:40286270-40286289 | None:intergenic | 50.0% | |
| GCATGGCTAAGTCCATTCCA+TGG | + | chr5_3:40286360-40286379 | None:intergenic | 50.0% | |
| TCAACGAGTTTACCTGGGCA+TGG | + | chr5_3:40286377-40286396 | None:intergenic | 50.0% | |
| CATGTGTATCCTCAGGTGGT+TGG | - | chr5_3:40286489-40286508 | Msa0811120:intron | 50.0% | |
| GCCAATACTGGGGAGACATT+TGG | + | chr5_3:40286552-40286571 | None:intergenic | 50.0% | |
| CATAAGGGAGGCCAATACTG+GGG | + | chr5_3:40286562-40286581 | None:intergenic | 50.0% | |
| CCATAAGGGAGGCCAATACT+GGG | + | chr5_3:40286563-40286582 | None:intergenic | 50.0% | |
| TCCATAAGGGAGGCCAATAC+TGG | + | chr5_3:40286564-40286583 | None:intergenic | 50.0% | |
| GAAGCTGCTAAAGTCACCAG+CGG | - | chr5_3:40287132-40287151 | Msa0811120:CDS | 50.0% | |
| !! | CCCATTTTTATCGCATCCGC+TGG | + | chr5_3:40287151-40287170 | None:intergenic | 50.0% |
| GCGGATGCGATAAAAATGGG+CGG | - | chr5_3:40287151-40287170 | Msa0811120:CDS | 50.0% | |
| GGTTCATTCCACCCAATCAC+GGG | + | chr5_3:40287195-40287214 | None:intergenic | 50.0% | |
| CATGAGCGACATGCTCCTTA+TGG | + | chr5_3:40287216-40287235 | None:intergenic | 50.0% | |
| ! | AGGAGCATGTCGCTCATGAT+CGG | - | chr5_3:40287218-40287237 | Msa0811120:CDS | 50.0% |
| ! | GTTGATGAGGACGATGACGG+CGG | + | chr5_3:40280425-40280444 | None:intergenic | 55.0% |
| !! | TGCTGATGCCGGTGTTGATG+AGG | + | chr5_3:40280438-40280457 | None:intergenic | 55.0% |
| TGAGCATCTGCTGCCGGATT+CGG | - | chr5_3:40280515-40280534 | Msa0811120:three_prime_UTR | 55.0% | |
| GAAGACACCTTCGCCGAATC+CGG | + | chr5_3:40280531-40280550 | None:intergenic | 55.0% | |
| GAAAAGGGGTTCCTTCCCTG+TGG | - | chr5_3:40282071-40282090 | Msa0811120:intron | 55.0% | |
| GTTCCTTCCCTGTGGAGCAA+GGG | - | chr5_3:40282079-40282098 | Msa0811120:intron | 55.0% | |
| TTCCTTCCCTGTGGAGCAAG+GGG | - | chr5_3:40282080-40282099 | Msa0811120:intron | 55.0% | |
| CCCGTGGACAAACTACCAAC+TGG | + | chr5_3:40282171-40282190 | None:intergenic | 55.0% | |
| GTTTGTCCACGGGACTCTGT+AGG | - | chr5_3:40282178-40282197 | Msa0811120:intron | 55.0% | |
| ! | GGAGGGTGTGGATTAACACG+AGG | - | chr5_3:40282327-40282346 | Msa0811120:intron | 55.0% |
| ACCTGCAACCTCGAGCAATG+CGG | + | chr5_3:40282437-40282456 | None:intergenic | 55.0% | |
| GGTTAGTGCAACGGCTACTG+TGG | - | chr5_3:40282520-40282539 | Msa0811120:intron | 55.0% | |
| GTTGACCTTGTTGGGGAACC+AGG | - | chr5_3:40282786-40282805 | Msa0811120:three_prime_UTR | 55.0% | |
| ! | ACAGGTGGTTCTGTACCTCC+AGG | + | chr5_3:40283510-40283529 | None:intergenic | 55.0% |
| CGACTTCATAACCAGGGTGC+TGG | - | chr5_3:40283766-40283785 | Msa0811120:intron | 55.0% | |
| TTGGAATATCCCCAGCACCC+TGG | + | chr5_3:40283780-40283799 | None:intergenic | 55.0% | |
| GGACAGTGTACCGTGCTGAA+TGG | - | chr5_3:40283985-40284004 | Msa0811120:three_prime_UTR | 55.0% | |
| GTGTACCGTGCTGAATGGCA+TGG | - | chr5_3:40283990-40284009 | Msa0811120:three_prime_UTR | 55.0% | |
| GGTTTAGCTGCCATGACGAC+TGG | - | chr5_3:40284203-40284222 | Msa0811120:intron | 55.0% | |
| ACGTGTCCGCCATCCAAATG+TGG | - | chr5_3:40284691-40284710 | Msa0811120:intron | 55.0% | |
| TGTGGTGCTCTTCATGGGTG+CGG | - | chr5_3:40284709-40284728 | Msa0811120:intron | 55.0% | |
| ! | TGGATGCTGGCCTGTGAATC+AGG | + | chr5_3:40284895-40284914 | None:intergenic | 55.0% |
| !! | AACTCTGGAGCCATCCACTC+AGG | + | chr5_3:40286255-40286274 | None:intergenic | 55.0% |
| ! | GAATGGACTTAGCCATGCCC+AGG | - | chr5_3:40286362-40286381 | Msa0811120:intron | 55.0% |
| !! | CCCAGTATTGGCCTCCCTTA+TGG | - | chr5_3:40286560-40286579 | Msa0811120:intron | 55.0% |
| CAAAAGATGGGCGATCGGCA+GGG | + | chr5_3:40287090-40287109 | None:intergenic | 55.0% | |
| GCTGGCAAAAGATGGGCGAT+CGG | + | chr5_3:40287095-40287114 | None:intergenic | 55.0% | |
| TCATTCCACCCAATCACGGG+AGG | + | chr5_3:40287192-40287211 | None:intergenic | 55.0% | |
| GGATCGTGAGCATCTGCTGC+CGG | - | chr5_3:40280509-40280528 | Msa0811120:three_prime_UTR | 60.0% | |
| !! | TTCGGCGAAGGTGTCTTCGC+CGG | - | chr5_3:40280533-40280552 | Msa0811120:three_prime_UTR | 60.0% |
| !! | GAAGGTGTCTTCGCCGGAGA+AGG | - | chr5_3:40280539-40280558 | Msa0811120:three_prime_UTR | 60.0% |
| GGTTCCTTCCCTGTGGAGCA+AGG | - | chr5_3:40282078-40282097 | Msa0811120:intron | 60.0% | |
| ATCCCCTTGCTCCACAGGGA+AGG | + | chr5_3:40282085-40282104 | None:intergenic | 60.0% | |
| GCAGATCCCCTTGCTCCACA+GGG | + | chr5_3:40282089-40282108 | None:intergenic | 60.0% | |
| TGCAGATCCCCTTGCTCCAC+AGG | + | chr5_3:40282090-40282109 | None:intergenic | 60.0% | |
| CAACCTCGAGCAATGCGGCA+CGG | + | chr5_3:40282432-40282451 | None:intergenic | 60.0% | |
| GCAAAAGATGGGCGATCGGC+AGG | + | chr5_3:40287091-40287110 | None:intergenic | 60.0% | |
| ACGAGTACGCCTCCCGTGAT+TGG | - | chr5_3:40287180-40287199 | Msa0811120:CDS | 60.0% | |
| CGAGTACGCCTCCCGTGATT+GGG | - | chr5_3:40287181-40287200 | Msa0811120:CDS | 60.0% | |
| !! | GATGACGGCGGTGATGGTGG+TGG | + | chr5_3:40280413-40280432 | None:intergenic | 65.0% |
| ! | GACGATGACGGCGGTGATGG+TGG | + | chr5_3:40280416-40280435 | None:intergenic | 65.0% |
| ! | GAGGACGATGACGGCGGTGA+TGG | + | chr5_3:40280419-40280438 | None:intergenic | 65.0% |
| TCTGCTGCCGGATTCGGCGA+AGG | - | chr5_3:40280521-40280540 | Msa0811120:three_prime_UTR | 65.0% | |
| GCGATGCCTACAGAGTCCCG+TGG | + | chr5_3:40282187-40282206 | None:intergenic | 65.0% | |
| TTGCCGTGCCGCATTGCTCG+AGG | - | chr5_3:40282426-40282445 | Msa0811120:intron | 65.0% | |
| GCCGCATTGCTCGAGGTTGC+AGG | - | chr5_3:40282433-40282452 | Msa0811120:three_prime_UTR | 65.0% | |
| GCGACAGCTCCAACCACCTG+AGG | + | chr5_3:40286501-40286520 | None:intergenic | 65.0% | |
| GTACGCCTCCCGTGATTGGG+TGG | - | chr5_3:40287184-40287203 | Msa0811120:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 40280120 | 40287616 | 40280120 | ID=Msa0811120;Name=Msa0811120 |
| chr5_3 | mRNA | 40280120 | 40287616 | 40280120 | ID=Msa0811120-mRNA-1;Parent=Msa0811120;Name=Msa0811120-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.82|0.83|1|0.76|0.77|18|2396|230 |
| chr5_3 | exon | 40280120 | 40280652 | 40280120 | ID=Msa0811120-mRNA-1:exon:12322;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40281138 | 40281232 | 40281138 | ID=Msa0811120-mRNA-1:exon:12321;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40281353 | 40281550 | 40281353 | ID=Msa0811120-mRNA-1:exon:12320;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40282431 | 40282499 | 40282431 | ID=Msa0811120-mRNA-1:exon:12319;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40282597 | 40282695 | 40282597 | ID=Msa0811120-mRNA-1:exon:12318;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40282775 | 40282859 | 40282775 | ID=Msa0811120-mRNA-1:exon:12317;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40282959 | 40283059 | 40282959 | ID=Msa0811120-mRNA-1:exon:12316;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40283377 | 40283445 | 40283377 | ID=Msa0811120-mRNA-1:exon:12315;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40283720 | 40283760 | 40283720 | ID=Msa0811120-mRNA-1:exon:12314;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40283850 | 40284122 | 40283850 | ID=Msa0811120-mRNA-1:exon:12313;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40284223 | 40284315 | 40284223 | ID=Msa0811120-mRNA-1:exon:12312;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40284758 | 40284960 | 40284758 | ID=Msa0811120-mRNA-1:exon:12311;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40285216 | 40285331 | 40285216 | ID=Msa0811120-mRNA-1:exon:12310;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40285515 | 40285659 | 40285515 | ID=Msa0811120-mRNA-1:exon:12309;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40285878 | 40286179 | 40285878 | ID=Msa0811120-mRNA-1:exon:12308;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40286854 | 40287053 | 40286854 | ID=Msa0811120-mRNA-1:exon:12307;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40287093 | 40287332 | 40287093 | ID=Msa0811120-mRNA-1:exon:12306;Parent=Msa0811120-mRNA-1 |
| chr5_3 | exon | 40287390 | 40287616 | 40287390 | ID=Msa0811120-mRNA-1:exon:12305;Parent=Msa0811120-mRNA-1 |
| chr5_3 | CDS | 40287390 | 40287616 | 40287390 | ID=Msa0811120-mRNA-1:cds;Parent=Msa0811120-mRNA-1 |
| chr5_3 | CDS | 40287093 | 40287332 | 40287093 | ID=Msa0811120-mRNA-1:cds;Parent=Msa0811120-mRNA-1 |
| chr5_3 | CDS | 40286854 | 40287053 | 40286854 | ID=Msa0811120-mRNA-1:cds;Parent=Msa0811120-mRNA-1 |
| chr5_3 | CDS | 40286154 | 40286179 | 40286154 | ID=Msa0811120-mRNA-1:cds;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40285878 | 40286153 | 40285878 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40285515 | 40285659 | 40285515 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40285216 | 40285331 | 40285216 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40284758 | 40284960 | 40284758 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40284223 | 40284315 | 40284223 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40283850 | 40284122 | 40283850 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40283720 | 40283760 | 40283720 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40283377 | 40283445 | 40283377 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40282959 | 40283059 | 40282959 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40282775 | 40282859 | 40282775 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40282597 | 40282695 | 40282597 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40282431 | 40282499 | 40282431 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40281353 | 40281550 | 40281353 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40281138 | 40281232 | 40281138 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| chr5_3 | three_prime_UTR | 40280120 | 40280652 | 40280120 | ID=Msa0811120-mRNA-1:three_prime_utr;Parent=Msa0811120-mRNA-1 |
| Gene Sequence |
| Protein sequence |