Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0814490 | XP_003616028.1 | 92.749 | 662 | 46 | 1 | 1 | 660 | 1 | 662 | 0.0 | 1258 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0814490 | sp|O80983|FTSH4_ARATH | 63.490 | 682 | 218 | 7 | 3 | 670 | 2 | 666 | 0.0 | 835 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0814490 | G7K0T1 | 92.749 | 662 | 46 | 1 | 1 | 660 | 1 | 662 | 0.0 | 1258 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0735470 | Msa0814490 | 0.804604 | 1.994828e-49 | -8.615850e-47 |
Msa0814490 | Msa0855020 | 0.815837 | 7.533929e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0814490 | MtrunA17_Chr5g0432631 | 92.749 | 662 | 46 | 1 | 1 | 660 | 1 | 662 | 0.0 | 1258 |
Msa0814490 | MtrunA17_Chr5g0432641 | 79.450 | 691 | 98 | 5 | 1 | 687 | 1 | 651 | 0.0 | 1074 |
Msa0814490 | MtrunA17_Chr3g0135721 | 74.009 | 681 | 150 | 6 | 3 | 671 | 2 | 667 | 0.0 | 976 |
Msa0814490 | MtrunA17_Chr3g0135761 | 70.772 | 674 | 170 | 6 | 3 | 665 | 2 | 659 | 0.0 | 913 |
Msa0814490 | MtrunA17_Chr8g0362771 | 61.966 | 702 | 201 | 9 | 1 | 664 | 1 | 674 | 0.0 | 818 |
Msa0814490 | MtrunA17_Chr5g0432391 | 67.917 | 480 | 91 | 7 | 179 | 652 | 2 | 424 | 0.0 | 590 |
Msa0814490 | MtrunA17_Chr1g0158881 | 58.296 | 446 | 178 | 4 | 215 | 659 | 316 | 754 | 7.70e-172 | 510 |
Msa0814490 | MtrunA17_Chr3g0143721 | 46.581 | 468 | 227 | 6 | 219 | 666 | 239 | 703 | 5.67e-134 | 410 |
Msa0814490 | MtrunA17_Chr2g0297281 | 45.733 | 457 | 226 | 8 | 220 | 660 | 279 | 729 | 1.68e-123 | 385 |
Msa0814490 | MtrunA17_Chr4g0052411 | 45.000 | 460 | 226 | 8 | 220 | 660 | 222 | 673 | 6.49e-122 | 379 |
Msa0814490 | MtrunA17_Chr3g0135791 | 69.412 | 255 | 77 | 1 | 412 | 665 | 1 | 255 | 9.71e-117 | 352 |
Msa0814490 | MtrunA17_Chr7g0217421 | 48.238 | 369 | 180 | 5 | 220 | 582 | 32 | 395 | 2.31e-112 | 344 |
Msa0814490 | MtrunA17_Chr6g0476861 | 39.669 | 484 | 273 | 7 | 191 | 660 | 159 | 637 | 3.33e-111 | 350 |
Msa0814490 | MtrunA17_Chr7g0248361 | 38.900 | 491 | 274 | 8 | 192 | 660 | 146 | 632 | 4.82e-106 | 336 |
Msa0814490 | MtrunA17_Chr7g0260601 | 40.789 | 456 | 251 | 7 | 219 | 660 | 230 | 680 | 3.52e-105 | 335 |
Msa0814490 | MtrunA17_Chr4g0031821 | 41.031 | 446 | 242 | 8 | 219 | 650 | 310 | 748 | 3.49e-101 | 328 |
Msa0814490 | MtrunA17_Chr3g0094871 | 38.190 | 453 | 249 | 8 | 221 | 660 | 3 | 437 | 1.17e-96 | 305 |
Msa0814490 | MtrunA17_Chr5g0429571 | 43.852 | 431 | 212 | 8 | 226 | 630 | 311 | 737 | 2.45e-91 | 301 |
Msa0814490 | MtrunA17_Chr3g0104211 | 43.018 | 444 | 225 | 9 | 226 | 644 | 302 | 742 | 9.25e-90 | 297 |
Msa0814490 | MtrunA17_Chr8g0388371 | 36.492 | 496 | 266 | 11 | 213 | 661 | 383 | 876 | 5.58e-80 | 273 |
Msa0814490 | MtrunA17_Chr3g0135781 | 67.391 | 184 | 60 | 0 | 203 | 386 | 29 | 212 | 3.45e-79 | 251 |
Msa0814490 | MtrunA17_Chr1g0168321 | 36.175 | 434 | 214 | 9 | 192 | 607 | 118 | 506 | 9.49e-75 | 249 |
Msa0814490 | MtrunA17_Chr6g0456351 | 45.342 | 322 | 156 | 6 | 172 | 483 | 265 | 576 | 2.64e-70 | 240 |
Msa0814490 | MtrunA17_Chr2g0331161 | 36.652 | 442 | 257 | 8 | 229 | 659 | 415 | 844 | 6.19e-68 | 239 |
Msa0814490 | MtrunA17_Chr3g0135741 | 69.343 | 137 | 41 | 1 | 415 | 550 | 2 | 138 | 8.21e-55 | 184 |
Msa0814490 | MtrunA17_Chr3g0129971 | 32.584 | 445 | 283 | 7 | 227 | 658 | 294 | 734 | 1.87e-54 | 200 |
Msa0814490 | MtrunA17_Chr8g0357301 | 29.718 | 461 | 272 | 11 | 244 | 657 | 485 | 940 | 7.14e-51 | 191 |
Msa0814490 | MtrunA17_Chr1g0180791 | 43.103 | 232 | 131 | 1 | 231 | 461 | 207 | 438 | 1.73e-48 | 182 |
Msa0814490 | MtrunA17_Chr1g0180791 | 34.892 | 278 | 172 | 4 | 179 | 452 | 433 | 705 | 6.55e-42 | 163 |
Msa0814490 | MtrunA17_Chr7g0264521 | 42.672 | 232 | 132 | 1 | 231 | 461 | 208 | 439 | 1.05e-47 | 180 |
Msa0814490 | MtrunA17_Chr7g0264521 | 33.813 | 278 | 175 | 3 | 179 | 452 | 434 | 706 | 6.23e-41 | 160 |
Msa0814490 | MtrunA17_Chr2g0327121 | 42.241 | 232 | 133 | 1 | 231 | 461 | 209 | 440 | 3.48e-47 | 179 |
Msa0814490 | MtrunA17_Chr2g0327121 | 39.823 | 226 | 132 | 2 | 231 | 452 | 482 | 707 | 8.40e-42 | 162 |
Msa0814490 | MtrunA17_Chr4g0050561 | 37.647 | 255 | 154 | 2 | 229 | 478 | 156 | 410 | 6.06e-47 | 171 |
Msa0814490 | MtrunA17_Chr5g0432681 | 64.029 | 139 | 22 | 2 | 538 | 670 | 1 | 117 | 6.48e-46 | 161 |
Msa0814490 | MtrunA17_Chr3g0135771 | 57.962 | 157 | 39 | 4 | 1 | 138 | 1 | 149 | 1.92e-45 | 159 |
Msa0814490 | MtrunA17_Chr3g0141901 | 39.738 | 229 | 131 | 3 | 231 | 452 | 138 | 366 | 3.94e-44 | 163 |
Msa0814490 | MtrunA17_Chr3g0145011 | 38.793 | 232 | 135 | 3 | 228 | 452 | 138 | 369 | 5.12e-44 | 163 |
Msa0814490 | MtrunA17_Chr1g0182711 | 39.184 | 245 | 145 | 2 | 231 | 471 | 190 | 434 | 1.13e-43 | 163 |
Msa0814490 | MtrunA17_Chr7g0262801 | 39.184 | 245 | 145 | 2 | 231 | 471 | 189 | 433 | 4.00e-43 | 161 |
Msa0814490 | MtrunA17_Chr5g0432671 | 73.148 | 108 | 25 | 1 | 424 | 531 | 1 | 104 | 5.19e-43 | 150 |
Msa0814490 | MtrunA17_Chr1g0192151 | 39.407 | 236 | 139 | 2 | 231 | 462 | 169 | 404 | 1.49e-42 | 159 |
Msa0814490 | MtrunA17_Chr4g0014731 | 39.407 | 236 | 139 | 2 | 231 | 462 | 170 | 405 | 1.85e-42 | 159 |
Msa0814490 | MtrunA17_Chr7g0255651 | 36.918 | 279 | 159 | 7 | 213 | 479 | 271 | 544 | 3.65e-42 | 161 |
Msa0814490 | MtrunA17_Chr7g0255651 | 31.250 | 224 | 132 | 8 | 254 | 462 | 39 | 255 | 3.41e-16 | 82.4 |
Msa0814490 | MtrunA17_Chr8g0345461 | 35.316 | 269 | 163 | 3 | 220 | 477 | 149 | 417 | 3.62e-41 | 155 |
Msa0814490 | MtrunA17_Chr1g0202371 | 39.256 | 242 | 140 | 5 | 215 | 452 | 383 | 621 | 5.45e-40 | 156 |
Msa0814490 | MtrunA17_Chr7g0255691 | 35.106 | 282 | 170 | 5 | 213 | 490 | 275 | 547 | 1.52e-39 | 153 |
Msa0814490 | MtrunA17_Chr7g0255691 | 35.780 | 218 | 123 | 7 | 244 | 450 | 32 | 243 | 1.63e-26 | 114 |
Msa0814490 | MtrunA17_Chr2g0277831 | 42.920 | 226 | 123 | 3 | 231 | 451 | 245 | 469 | 2.11e-39 | 155 |
Msa0814490 | MtrunA17_Chr2g0277831 | 40.444 | 225 | 131 | 2 | 228 | 449 | 532 | 756 | 9.55e-39 | 153 |
Msa0814490 | MtrunA17_Chr1g0200081 | 35.316 | 269 | 162 | 4 | 220 | 477 | 159 | 426 | 2.44e-39 | 150 |
Msa0814490 | MtrunA17_Chr3g0086401 | 41.909 | 241 | 119 | 7 | 230 | 449 | 386 | 626 | 3.50e-39 | 154 |
Msa0814490 | MtrunA17_Chr3g0086401 | 39.035 | 228 | 125 | 5 | 226 | 442 | 89 | 313 | 8.94e-33 | 134 |
Msa0814490 | MtrunA17_Chr7g0255721 | 38.115 | 244 | 146 | 4 | 231 | 469 | 687 | 930 | 6.24e-39 | 154 |
Msa0814490 | MtrunA17_Chr7g0255721 | 37.900 | 219 | 132 | 3 | 231 | 447 | 388 | 604 | 1.39e-30 | 128 |
Msa0814490 | MtrunA17_Chr7g0255641 | 36.179 | 246 | 150 | 4 | 230 | 469 | 659 | 903 | 6.44e-39 | 154 |
Msa0814490 | MtrunA17_Chr7g0255641 | 38.333 | 180 | 108 | 2 | 267 | 445 | 432 | 609 | 3.42e-25 | 111 |
Msa0814490 | MtrunA17_Chr8g0387641 | 36.863 | 255 | 151 | 6 | 215 | 463 | 507 | 757 | 2.24e-38 | 152 |
Msa0814490 | MtrunA17_Chr3g0135731 | 74.713 | 87 | 22 | 0 | 579 | 665 | 1 | 87 | 4.17e-38 | 137 |
Msa0814490 | MtrunA17_Chr4g0043381 | 36.923 | 260 | 155 | 3 | 231 | 483 | 839 | 1096 | 4.74e-38 | 152 |
Msa0814490 | MtrunA17_Chr3g0086411 | 38.750 | 240 | 128 | 5 | 229 | 449 | 215 | 454 | 4.85e-38 | 148 |
Msa0814490 | MtrunA17_Chr3g0086411 | 40.462 | 173 | 74 | 5 | 316 | 477 | 7 | 161 | 2.52e-20 | 95.1 |
Msa0814490 | MtrunA17_Chr6g0462581 | 38.934 | 244 | 138 | 7 | 215 | 452 | 486 | 724 | 5.05e-38 | 151 |
Msa0814490 | MtrunA17_Chr1g0202381 | 38.589 | 241 | 140 | 6 | 217 | 452 | 456 | 693 | 1.01e-37 | 150 |
Msa0814490 | MtrunA17_Chr1g0204031 | 38.589 | 241 | 140 | 6 | 217 | 452 | 545 | 782 | 1.34e-36 | 147 |
Msa0814490 | MtrunA17_Chr5g0397121 | 36.475 | 244 | 145 | 6 | 215 | 452 | 499 | 738 | 1.12e-35 | 144 |
Msa0814490 | MtrunA17_Chr3g0108321 | 39.796 | 196 | 114 | 2 | 221 | 412 | 151 | 346 | 1.82e-35 | 138 |
Msa0814490 | MtrunA17_Chr3g0135751 | 77.011 | 87 | 16 | 1 | 56 | 138 | 10 | 96 | 1.55e-34 | 127 |
Msa0814490 | MtrunA17_Chr1g0195741 | 39.130 | 230 | 131 | 6 | 223 | 446 | 932 | 1158 | 1.58e-34 | 141 |
Msa0814490 | MtrunA17_Chr6g0459561 | 36.975 | 238 | 136 | 8 | 231 | 458 | 384 | 617 | 1.05e-33 | 137 |
Msa0814490 | MtrunA17_Chr3g0116131 | 36.797 | 231 | 139 | 4 | 223 | 448 | 896 | 1124 | 1.24e-33 | 138 |
Msa0814490 | MtrunA17_Chr4g0038101 | 35.776 | 232 | 142 | 4 | 226 | 452 | 718 | 947 | 1.27e-33 | 138 |
Msa0814490 | MtrunA17_Chr1g0195731 | 36.245 | 229 | 139 | 4 | 223 | 446 | 928 | 1154 | 1.51e-33 | 138 |
Msa0814490 | MtrunA17_Chr4g0026631 | 35.319 | 235 | 136 | 9 | 216 | 442 | 115 | 341 | 4.45e-33 | 132 |
Msa0814490 | MtrunA17_Chr8g0362761 | 48.052 | 154 | 26 | 2 | 186 | 333 | 8 | 113 | 1.50e-32 | 122 |
Msa0814490 | MtrunA17_Chr4g0004121 | 33.125 | 320 | 169 | 12 | 213 | 496 | 219 | 529 | 7.65e-32 | 130 |
Msa0814490 | MtrunA17_Chr2g0321241 | 34.894 | 235 | 137 | 9 | 216 | 442 | 120 | 346 | 8.34e-32 | 129 |
Msa0814490 | MtrunA17_Chr2g0316851 | 36.842 | 228 | 128 | 5 | 239 | 451 | 597 | 823 | 1.31e-31 | 132 |
Msa0814490 | MtrunA17_Chr7g0255901 | 37.179 | 234 | 132 | 7 | 228 | 451 | 638 | 866 | 1.31e-31 | 132 |
Msa0814490 | MtrunA17_Chr4g0033451 | 34.766 | 256 | 159 | 4 | 220 | 467 | 370 | 625 | 3.05e-31 | 131 |
Msa0814490 | MtrunA17_Chr7g0246111 | 36.161 | 224 | 136 | 5 | 228 | 447 | 211 | 431 | 5.95e-31 | 127 |
Msa0814490 | MtrunA17_Chr3g0127401 | 34.892 | 278 | 161 | 8 | 229 | 490 | 81 | 354 | 1.72e-30 | 124 |
Msa0814490 | MtrunA17_Chr3g0127431 | 34.364 | 291 | 164 | 8 | 230 | 502 | 85 | 366 | 2.66e-30 | 124 |
Msa0814490 | MtrunA17_Chr1g0190401 | 33.333 | 243 | 145 | 6 | 231 | 462 | 679 | 915 | 5.74e-30 | 127 |
Msa0814490 | MtrunA17_Chr6g0459541 | 30.986 | 284 | 147 | 10 | 231 | 469 | 44 | 323 | 3.68e-29 | 119 |
Msa0814490 | MtrunA17_Chr4g0052271 | 34.061 | 229 | 142 | 6 | 228 | 451 | 118 | 342 | 1.47e-28 | 118 |
Msa0814490 | MtrunA17_Chr5g0432661 | 72.727 | 77 | 17 | 1 | 179 | 255 | 2 | 74 | 1.68e-28 | 109 |
Msa0814490 | MtrunA17_Chr2g0327231 | 39.506 | 162 | 94 | 2 | 228 | 385 | 345 | 506 | 1.85e-27 | 117 |
Msa0814490 | MtrunA17_Chr2g0327231 | 37.931 | 87 | 51 | 1 | 231 | 317 | 155 | 238 | 3.30e-11 | 66.2 |
Msa0814490 | MtrunA17_Chr6g0459551 | 31.873 | 251 | 130 | 9 | 231 | 447 | 104 | 347 | 1.79e-25 | 109 |
Msa0814490 | MtrunA17_Chr4g0047411 | 32.117 | 274 | 160 | 8 | 254 | 501 | 202 | 475 | 2.06e-23 | 105 |
Msa0814490 | MtrunA17_Chr6g0459531 | 30.180 | 222 | 120 | 8 | 231 | 447 | 69 | 260 | 5.52e-20 | 91.7 |
Msa0814490 | MtrunA17_Chr2g0289231 | 29.515 | 227 | 141 | 5 | 265 | 481 | 342 | 559 | 8.94e-20 | 93.6 |
Msa0814490 | MtrunA17_Chr8g0392971 | 34.314 | 102 | 66 | 1 | 435 | 535 | 51 | 152 | 4.67e-12 | 64.7 |
Msa0814490 | MtrunA17_Chr8g0392981 | 30.833 | 120 | 77 | 2 | 544 | 659 | 1 | 118 | 1.25e-11 | 62.4 |
Msa0814490 | MtrunA17_Chr2g0315991 | 30.000 | 160 | 96 | 5 | 261 | 412 | 230 | 381 | 3.11e-11 | 66.2 |
Msa0814490 | MtrunA17_Chr6g0466811 | 30.114 | 176 | 98 | 6 | 236 | 394 | 215 | 382 | 5.39e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0814490 | AT2G26140.1 | 63.490 | 682 | 218 | 7 | 3 | 670 | 2 | 666 | 0.0 | 835 |
Msa0814490 | AT5G53170.1 | 48.680 | 606 | 262 | 12 | 85 | 659 | 197 | 784 | 9.28e-172 | 511 |
Msa0814490 | AT1G50250.1 | 46.170 | 470 | 226 | 7 | 219 | 666 | 249 | 713 | 3.55e-133 | 409 |
Msa0814490 | AT5G42270.1 | 46.795 | 468 | 226 | 6 | 219 | 666 | 237 | 701 | 1.44e-131 | 404 |
Msa0814490 | AT1G06430.1 | 45.952 | 457 | 225 | 8 | 220 | 660 | 210 | 660 | 9.40e-125 | 386 |
Msa0814490 | AT1G06430.3 | 45.952 | 457 | 225 | 8 | 220 | 660 | 210 | 660 | 9.40e-125 | 386 |
Msa0814490 | AT1G06430.2 | 45.952 | 457 | 225 | 8 | 220 | 660 | 210 | 660 | 9.40e-125 | 386 |
Msa0814490 | AT5G15250.1 | 46.841 | 459 | 219 | 10 | 220 | 660 | 214 | 665 | 3.14e-123 | 382 |
Msa0814490 | AT2G30950.4 | 45.534 | 459 | 224 | 8 | 220 | 660 | 221 | 671 | 1.18e-122 | 381 |
Msa0814490 | AT2G30950.1 | 45.534 | 459 | 224 | 8 | 220 | 660 | 217 | 667 | 1.25e-122 | 381 |
Msa0814490 | AT2G30950.2 | 45.534 | 459 | 224 | 8 | 220 | 660 | 217 | 667 | 1.25e-122 | 381 |
Msa0814490 | AT2G30950.3 | 45.534 | 459 | 224 | 8 | 220 | 660 | 217 | 667 | 1.25e-122 | 381 |
Msa0814490 | AT2G29080.1 | 41.309 | 443 | 242 | 7 | 231 | 660 | 321 | 758 | 3.21e-102 | 331 |
Msa0814490 | AT1G07510.1 | 40.090 | 444 | 245 | 8 | 231 | 660 | 326 | 762 | 3.68e-100 | 325 |
Msa0814490 | AT5G58870.1 | 43.596 | 445 | 220 | 10 | 226 | 644 | 324 | 763 | 3.79e-93 | 306 |
Msa0814490 | AT3G47060.1 | 43.111 | 450 | 215 | 10 | 226 | 644 | 320 | 759 | 1.30e-91 | 302 |
Msa0814490 | AT4G23940.1 | 37.474 | 475 | 254 | 9 | 227 | 659 | 425 | 898 | 5.43e-83 | 282 |
Msa0814490 | AT5G15250.2 | 41.570 | 433 | 181 | 15 | 126 | 497 | 93 | 514 | 8.42e-83 | 271 |
Msa0814490 | AT3G02450.1 | 50.000 | 272 | 129 | 2 | 212 | 476 | 309 | 580 | 1.55e-73 | 249 |
Msa0814490 | AT3G16290.1 | 35.068 | 442 | 264 | 5 | 229 | 659 | 407 | 836 | 1.26e-68 | 241 |
Msa0814490 | AT5G64580.1 | 33.056 | 481 | 282 | 13 | 226 | 680 | 310 | 776 | 5.39e-58 | 211 |
Msa0814490 | AT1G79560.1 | 28.137 | 526 | 314 | 11 | 195 | 661 | 444 | 964 | 2.40e-52 | 196 |
Msa0814490 | AT1G79560.2 | 28.137 | 526 | 314 | 11 | 195 | 661 | 444 | 964 | 2.61e-52 | 195 |
Msa0814490 | AT1G79560.3 | 28.627 | 517 | 305 | 11 | 195 | 652 | 444 | 955 | 4.65e-52 | 194 |
Msa0814490 | AT3G09840.1 | 42.241 | 232 | 133 | 1 | 231 | 461 | 206 | 437 | 9.32e-48 | 181 |
Msa0814490 | AT3G09840.1 | 37.885 | 227 | 136 | 2 | 231 | 452 | 479 | 705 | 9.18e-41 | 160 |
Msa0814490 | AT5G03340.1 | 42.241 | 232 | 133 | 1 | 231 | 461 | 206 | 437 | 1.07e-47 | 181 |
Msa0814490 | AT5G03340.1 | 38.496 | 226 | 135 | 2 | 231 | 452 | 479 | 704 | 2.20e-41 | 162 |
Msa0814490 | AT3G53230.1 | 41.597 | 238 | 138 | 1 | 231 | 467 | 207 | 444 | 3.58e-47 | 179 |
Msa0814490 | AT3G53230.1 | 40.092 | 217 | 126 | 2 | 231 | 443 | 480 | 696 | 6.70e-42 | 163 |
Msa0814490 | AT5G19990.2 | 37.743 | 257 | 151 | 3 | 229 | 478 | 100 | 354 | 5.34e-46 | 167 |
Msa0814490 | AT5G19990.1 | 37.647 | 255 | 154 | 2 | 229 | 478 | 158 | 412 | 6.84e-46 | 169 |
Msa0814490 | AT5G19990.3 | 37.647 | 255 | 154 | 2 | 229 | 478 | 158 | 412 | 6.84e-46 | 169 |
Msa0814490 | AT5G20000.1 | 37.743 | 257 | 151 | 3 | 229 | 478 | 158 | 412 | 8.94e-46 | 169 |
Msa0814490 | AT1G45000.1 | 41.048 | 229 | 128 | 3 | 231 | 452 | 138 | 366 | 5.49e-44 | 163 |
Msa0814490 | AT2G20140.1 | 39.592 | 245 | 144 | 2 | 231 | 471 | 187 | 431 | 1.54e-43 | 163 |
Msa0814490 | AT3G05530.1 | 40.254 | 236 | 137 | 2 | 231 | 462 | 170 | 405 | 2.12e-43 | 162 |
Msa0814490 | AT5G43010.1 | 31.793 | 368 | 222 | 9 | 106 | 452 | 7 | 366 | 8.89e-43 | 160 |
Msa0814490 | AT4G29040.1 | 38.776 | 245 | 146 | 2 | 231 | 471 | 187 | 431 | 1.33e-42 | 160 |
Msa0814490 | AT1G09100.1 | 38.983 | 236 | 140 | 2 | 231 | 462 | 169 | 404 | 2.01e-41 | 156 |
Msa0814490 | AT3G56690.1 | 38.525 | 244 | 145 | 4 | 231 | 469 | 723 | 966 | 3.39e-41 | 162 |
Msa0814490 | AT3G56690.1 | 35.000 | 240 | 152 | 2 | 230 | 465 | 383 | 622 | 6.14e-31 | 130 |
Msa0814490 | AT1G53750.1 | 35.316 | 269 | 163 | 3 | 220 | 477 | 149 | 417 | 7.75e-41 | 155 |
Msa0814490 | AT1G53780.2 | 35.316 | 269 | 163 | 3 | 220 | 477 | 342 | 610 | 4.33e-40 | 156 |
Msa0814490 | AT1G53780.1 | 35.316 | 269 | 163 | 3 | 220 | 477 | 321 | 589 | 5.71e-40 | 155 |
Msa0814490 | AT1G53780.4 | 35.316 | 269 | 163 | 3 | 220 | 477 | 321 | 589 | 5.71e-40 | 155 |
Msa0814490 | AT1G53780.3 | 35.316 | 269 | 163 | 3 | 220 | 477 | 320 | 588 | 5.81e-40 | 155 |
Msa0814490 | AT3G01610.2 | 38.211 | 246 | 139 | 3 | 218 | 451 | 219 | 463 | 7.81e-40 | 157 |
Msa0814490 | AT3G01610.2 | 39.918 | 243 | 141 | 4 | 224 | 462 | 520 | 761 | 1.14e-33 | 138 |
Msa0814490 | AT3G01610.1 | 38.211 | 246 | 139 | 3 | 218 | 451 | 219 | 463 | 8.65e-40 | 157 |
Msa0814490 | AT3G01610.1 | 39.918 | 243 | 141 | 4 | 224 | 462 | 520 | 761 | 1.15e-33 | 138 |
Msa0814490 | AT5G08470.1 | 41.364 | 220 | 128 | 1 | 231 | 449 | 843 | 1062 | 2.39e-39 | 156 |
Msa0814490 | AT5G08470.3 | 41.364 | 220 | 128 | 1 | 231 | 449 | 834 | 1053 | 2.46e-39 | 156 |
Msa0814490 | AT5G58290.1 | 36.842 | 247 | 152 | 2 | 221 | 463 | 144 | 390 | 3.20e-39 | 150 |
Msa0814490 | AT4G28000.3 | 37.255 | 255 | 149 | 7 | 215 | 463 | 503 | 752 | 3.46e-39 | 155 |
Msa0814490 | AT4G28000.2 | 37.255 | 255 | 149 | 7 | 215 | 463 | 503 | 752 | 3.65e-39 | 155 |
Msa0814490 | AT4G28000.1 | 37.255 | 255 | 149 | 7 | 215 | 463 | 501 | 750 | 4.16e-39 | 155 |
Msa0814490 | AT5G52882.1 | 37.705 | 244 | 141 | 7 | 215 | 452 | 500 | 738 | 7.73e-38 | 151 |
Msa0814490 | AT1G64110.2 | 37.295 | 244 | 143 | 6 | 215 | 452 | 504 | 743 | 1.58e-37 | 150 |
Msa0814490 | AT1G64110.4 | 37.295 | 244 | 143 | 6 | 215 | 452 | 504 | 743 | 1.58e-37 | 150 |
Msa0814490 | AT1G64110.5 | 37.295 | 244 | 143 | 6 | 215 | 452 | 502 | 741 | 1.81e-37 | 150 |
Msa0814490 | AT1G64110.3 | 37.295 | 244 | 143 | 6 | 215 | 452 | 502 | 741 | 1.81e-37 | 150 |
Msa0814490 | AT1G64110.1 | 37.295 | 244 | 143 | 6 | 215 | 452 | 499 | 738 | 2.00e-37 | 150 |
Msa0814490 | AT2G03670.1 | 35.632 | 261 | 158 | 4 | 213 | 468 | 272 | 527 | 1.30e-36 | 145 |
Msa0814490 | AT2G03670.1 | 32.530 | 249 | 159 | 4 | 232 | 472 | 22 | 269 | 2.88e-28 | 120 |
Msa0814490 | AT1G03000.1 | 36.797 | 231 | 137 | 5 | 228 | 451 | 654 | 882 | 1.25e-33 | 138 |
Msa0814490 | AT1G02890.1 | 36.100 | 241 | 139 | 6 | 215 | 446 | 927 | 1161 | 7.16e-33 | 136 |
Msa0814490 | AT4G02480.1 | 36.100 | 241 | 139 | 5 | 215 | 446 | 946 | 1180 | 7.90e-33 | 136 |
Msa0814490 | AT2G45500.4 | 32.222 | 270 | 173 | 7 | 228 | 492 | 79 | 343 | 2.60e-32 | 129 |
Msa0814490 | AT2G45500.3 | 32.222 | 270 | 173 | 7 | 228 | 492 | 79 | 343 | 2.60e-32 | 129 |
Msa0814490 | AT2G27600.1 | 36.239 | 218 | 130 | 7 | 230 | 442 | 130 | 343 | 4.02e-32 | 130 |
Msa0814490 | AT2G45500.2 | 32.222 | 270 | 173 | 7 | 228 | 492 | 212 | 476 | 1.09e-31 | 129 |
Msa0814490 | AT2G45500.1 | 32.222 | 270 | 173 | 7 | 228 | 492 | 216 | 480 | 1.41e-31 | 129 |
Msa0814490 | AT1G50140.2 | 35.345 | 232 | 143 | 4 | 226 | 452 | 686 | 915 | 1.41e-31 | 132 |
Msa0814490 | AT1G50140.5 | 35.345 | 232 | 143 | 4 | 226 | 452 | 686 | 915 | 1.41e-31 | 132 |
Msa0814490 | AT1G50140.3 | 35.345 | 232 | 143 | 4 | 226 | 452 | 708 | 937 | 1.43e-31 | 132 |
Msa0814490 | AT1G50140.1 | 35.345 | 232 | 143 | 4 | 226 | 452 | 708 | 937 | 1.43e-31 | 132 |
Msa0814490 | AT1G50140.4 | 35.345 | 232 | 143 | 4 | 226 | 452 | 708 | 937 | 1.43e-31 | 132 |
Msa0814490 | AT2G45500.5 | 32.222 | 270 | 173 | 7 | 228 | 492 | 222 | 486 | 1.46e-31 | 129 |
Msa0814490 | AT3G27120.1 | 33.712 | 264 | 151 | 9 | 226 | 469 | 397 | 656 | 1.57e-31 | 131 |
Msa0814490 | AT3G15120.1 | 36.250 | 240 | 145 | 3 | 216 | 449 | 706 | 943 | 1.79e-31 | 132 |
Msa0814490 | AT3G15120.2 | 36.250 | 240 | 145 | 3 | 216 | 449 | 716 | 953 | 1.83e-31 | 132 |
Msa0814490 | AT1G05910.1 | 32.014 | 278 | 181 | 4 | 220 | 489 | 368 | 645 | 1.26e-30 | 129 |
Msa0814490 | AT1G80350.1 | 34.387 | 253 | 144 | 8 | 213 | 447 | 213 | 461 | 3.20e-30 | 125 |
Msa0814490 | AT3G19740.1 | 34.483 | 232 | 145 | 5 | 226 | 452 | 698 | 927 | 3.48e-30 | 127 |
Msa0814490 | AT3G04340.1 | 37.306 | 193 | 117 | 2 | 236 | 424 | 788 | 980 | 5.62e-30 | 127 |
Msa0814490 | AT4G24860.1 | 34.361 | 227 | 142 | 4 | 231 | 452 | 819 | 1043 | 1.02e-29 | 126 |
Msa0814490 | AT4G24860.3 | 34.361 | 227 | 142 | 4 | 231 | 452 | 817 | 1041 | 1.10e-29 | 126 |
Msa0814490 | AT4G24860.2 | 34.361 | 227 | 142 | 4 | 231 | 452 | 815 | 1039 | 1.20e-29 | 126 |
Msa0814490 | AT4G24860.4 | 34.361 | 227 | 142 | 4 | 231 | 452 | 792 | 1016 | 1.22e-29 | 126 |
Msa0814490 | AT2G34560.1 | 35.088 | 228 | 138 | 6 | 230 | 451 | 101 | 324 | 5.64e-29 | 119 |
Msa0814490 | AT5G53540.1 | 33.209 | 268 | 161 | 7 | 229 | 482 | 84 | 347 | 6.53e-29 | 120 |
Msa0814490 | AT2G34560.2 | 35.088 | 228 | 138 | 6 | 230 | 451 | 110 | 333 | 7.49e-29 | 119 |
Msa0814490 | AT2G03670.2 | 32.530 | 249 | 159 | 4 | 232 | 472 | 22 | 269 | 7.59e-29 | 120 |
Msa0814490 | AT2G03670.2 | 33.121 | 157 | 95 | 4 | 213 | 364 | 272 | 423 | 2.03e-13 | 73.6 |
Msa0814490 | AT1G62130.2 | 34.468 | 235 | 135 | 6 | 219 | 448 | 733 | 953 | 6.39e-28 | 120 |
Msa0814490 | AT4G27680.1 | 32.472 | 271 | 165 | 7 | 229 | 485 | 81 | 347 | 6.46e-28 | 117 |
Msa0814490 | AT1G62130.1 | 34.468 | 235 | 135 | 6 | 219 | 448 | 740 | 960 | 6.65e-28 | 120 |
Msa0814490 | AT1G45000.2 | 41.304 | 138 | 77 | 2 | 231 | 364 | 138 | 275 | 3.09e-23 | 102 |
Msa0814490 | AT4G04910.1 | 30.769 | 286 | 172 | 8 | 254 | 513 | 239 | 524 | 9.14e-23 | 103 |
Msa0814490 | AT4G04180.2 | 29.583 | 240 | 154 | 5 | 216 | 445 | 298 | 532 | 3.13e-22 | 102 |
Msa0814490 | AT4G04180.1 | 29.583 | 240 | 154 | 5 | 216 | 445 | 303 | 537 | 3.19e-22 | 102 |
Msa0814490 | AT5G08470.2 | 38.621 | 145 | 88 | 1 | 231 | 374 | 843 | 987 | 1.57e-21 | 100 |
Msa0814490 | AT1G02890.2 | 30.833 | 240 | 125 | 6 | 215 | 446 | 927 | 1133 | 3.84e-21 | 99.4 |
Msa0814490 | AT4G05380.1 | 32.903 | 155 | 78 | 6 | 260 | 396 | 238 | 384 | 9.02e-11 | 65.1 |
Find 178 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCAACTATGGCATACAATT+TGG | 0.177327 | 5_3:+46682518 | Msa0814490:CDS |
AAAAGGACGGCGAGAGATTT+TGG | 0.226559 | 5_3:+46684161 | Msa0814490:CDS |
TACATTTGGTCGTTTGAATT+TGG | 0.239758 | 5_3:-46683976 | None:intergenic |
TAAATTAAAATTCCATTGTT+TGG | 0.266957 | 5_3:+46685193 | Msa0814490:exon |
CTGAAGCATCACACACTTAC+AGG | 0.275516 | 5_3:+46685064 | Msa0814490:CDS |
TGAACCTTCTCAAACTTCTT+AGG | 0.278961 | 5_3:+46685537 | Msa0814490:three_prime_UTR |
CCATAAAGCAAAACACCTTT+TGG | 0.288448 | 5_3:-46683751 | None:intergenic |
AGCGCTATTGCTGGAGAGGC+TGG | 0.309034 | 5_3:+46683805 | Msa0814490:CDS |
CCAACAAAAGATGGGATTCT+TGG | 0.319580 | 5_3:+46682439 | Msa0814490:CDS |
CATACAATTTGGTTTGTTGC+AGG | 0.333814 | 5_3:+46682529 | Msa0814490:CDS |
CACCGTCCTTTGCTGCCCTC+AGG | 0.333846 | 5_3:-46684469 | None:intergenic |
GAGAGCCTGTTCTGATCTTT+AGG | 0.338621 | 5_3:-46684710 | None:intergenic |
CTCAAATTTATGTAGGGAAT+AGG | 0.339123 | 5_3:+46681352 | Msa0814490:intron |
AAACCTGCATTCGAGCTTGA+TGG | 0.340073 | 5_3:-46679893 | None:intergenic |
AAAATTTCAAAGCGCAACTA+TGG | 0.345391 | 5_3:+46682506 | Msa0814490:CDS |
CGCACTGGAGAAGATTATAA+TGG | 0.348117 | 5_3:+46684523 | Msa0814490:CDS |
CAGTTTACACCTGGGTTCTC+TGG | 0.351662 | 5_3:+46684413 | Msa0814490:CDS |
ATTGATGAGATTGATGCTAT+TGG | 0.359213 | 5_3:+46683946 | Msa0814490:CDS |
ATTAAAGATTTACTTGCAAA+TGG | 0.362072 | 5_3:+46685094 | Msa0814490:CDS |
CACATTCTTTCATGGCTGCT+TGG | 0.362228 | 5_3:+46679835 | None:intergenic |
CATAAGTTTGAAAAGTTTGA+AGG | 0.363631 | 5_3:+46681104 | Msa0814490:CDS |
TGCCAGATTTCCTAGATATC+TGG | 0.363703 | 5_3:-46681391 | None:intergenic |
ACAATAGTTGCCTGGTGAAC+AGG | 0.365159 | 5_3:-46684650 | None:intergenic |
GTTCCCAATCCAGATGTAAA+AGG | 0.366841 | 5_3:+46684144 | Msa0814490:CDS |
GTCAAAGCTAAGGCTATGTT+TGG | 0.367541 | 5_3:+46685130 | Msa0814490:CDS |
ATCATGTGTGCTCACGGCTT+TGG | 0.376647 | 5_3:-46684492 | None:intergenic |
CAGTTGCTTGTTGAGTTAGA+TGG | 0.381889 | 5_3:+46684018 | Msa0814490:CDS |
TATGCTCTAATCACGGCTTC+AGG | 0.391073 | 5_3:-46681483 | None:intergenic |
AGAATTATGTAGAGAAGGTA+AGG | 0.393548 | 5_3:-46685364 | None:intergenic |
GGACAAAGTGGAGTTAATTC+CGG | 0.393727 | 5_3:+46684800 | Msa0814490:CDS |
AGGCAAATGGTTACTAGATA+TGG | 0.396114 | 5_3:+46684860 | Msa0814490:CDS |
GTCCAGATATCTAGGAAATC+TGG | 0.402847 | 5_3:+46681389 | Msa0814490:CDS |
GATAAGGTTGCTGCATTAGA+AGG | 0.404160 | 5_3:+46682481 | Msa0814490:CDS |
TTCTCCCAGTCCAGATATCT+AGG | 0.408648 | 5_3:+46681381 | Msa0814490:CDS |
GGAGCTCACATCGTGTATAA+AGG | 0.424440 | 5_3:+46682577 | Msa0814490:CDS |
TCACAGCGCCTTACTTGTCT+TGG | 0.425206 | 5_3:+46683718 | Msa0814490:intron |
TGGTGCTGACCTTGCAAACT+TGG | 0.428647 | 5_3:+46684433 | Msa0814490:CDS |
CTTTATGGCCCGCCTGGCAC+CGG | 0.429545 | 5_3:+46683766 | Msa0814490:CDS |
AAACAATGCAGCTGCAGCTT+CGG | 0.430789 | 5_3:+46685489 | Msa0814490:three_prime_UTR |
CTCATGGGGAGTCTCGTGGC+AGG | 0.432045 | 5_3:+46684675 | Msa0814490:CDS |
AAGTCAACTTCACGTACATT+TGG | 0.434246 | 5_3:-46683990 | None:intergenic |
ATCAGTATAAATTGCAACTA+AGG | 0.437936 | 5_3:-46684618 | None:intergenic |
AGCTGCAGCTGCATTGTTTG+TGG | 0.439363 | 5_3:-46685485 | None:intergenic |
ATGTTGGTGAGCGCTATTGC+TGG | 0.440694 | 5_3:+46683796 | Msa0814490:CDS |
AACTTCTCTGGCCAGGCAAA+TGG | 0.442048 | 5_3:+46684847 | Msa0814490:CDS |
TATTTCTCATTCAGCGAGAA+AGG | 0.445696 | 5_3:+46682369 | Msa0814490:CDS |
TACAATTTGGTTTGTTGCAG+GGG | 0.447783 | 5_3:+46682531 | Msa0814490:CDS |
ATACAATTTGGTTTGTTGCA+GGG | 0.448167 | 5_3:+46682530 | Msa0814490:CDS |
GTTAAAGCATTAGTAAAAGT+TGG | 0.448744 | 5_3:+46681555 | Msa0814490:CDS |
CGTCCATTGCTTGAGAAGAA+AGG | 0.451927 | 5_3:-46683832 | None:intergenic |
ACCGTCCTTTGCTGCCCTCA+GGG | 0.452215 | 5_3:-46684468 | None:intergenic |
AGCTTCAGCTGCATTGGTCG+CGG | 0.454740 | 5_3:-46685515 | None:intergenic |
CGCTATTGCTGGAGAGGCTG+GGG | 0.455527 | 5_3:+46683807 | Msa0814490:CDS |
ATTTGCCTAAAGATCAGAAC+AGG | 0.460662 | 5_3:+46684705 | Msa0814490:CDS |
GTTCCTTTCTTCTCAAGCAA+TGG | 0.462270 | 5_3:+46683829 | Msa0814490:CDS |
GTCACGATTACTTCGATAAC+GGG | 0.463595 | 5_3:+46684909 | Msa0814490:CDS |
CCATCTTATTCCGCCCAAAT+CGG | 0.466670 | 5_3:-46685294 | None:intergenic |
TTCTTCGACATATGCAGTGT+TGG | 0.468683 | 5_3:+46685420 | Msa0814490:three_prime_UTR |
ATTCTTTCATGGCTGCTTGG+AGG | 0.469513 | 5_3:+46679838 | None:intergenic |
TACAAGTGCTCCTGTCGATA+AGG | 0.469949 | 5_3:+46682465 | Msa0814490:CDS |
TGCCAGACTTGATGTTTGCA+TGG | 0.470849 | 5_3:+46684748 | Msa0814490:CDS |
TCCCATGCAAACATCAAGTC+TGG | 0.470937 | 5_3:-46684750 | None:intergenic |
TGATGTTTGCATGGGAGGTC+GGG | 0.471553 | 5_3:+46684757 | Msa0814490:CDS |
AAGCATTAGTAAAAGTTGGC+AGG | 0.472384 | 5_3:+46681559 | Msa0814490:CDS |
CCGATTTGGGCGGAATAAGA+TGG | 0.472829 | 5_3:+46685294 | Msa0814490:three_prime_UTR |
GATGGTTTCAAACAAAATGA+AGG | 0.474363 | 5_3:+46684036 | Msa0814490:CDS |
GTAAAGTTCTTTAAGAGAAG+AGG | 0.480218 | 5_3:-46681448 | None:intergenic |
CTCTCCCGAGTCAATAGATA+AGG | 0.481093 | 5_3:+46684083 | Msa0814490:CDS |
CTCTAAATCATGTGTGCTCA+CGG | 0.481334 | 5_3:-46684498 | None:intergenic |
GCGCTATTGCTGGAGAGGCT+GGG | 0.487223 | 5_3:+46683806 | Msa0814490:CDS |
TTAAAGCAACTTCTCTGGCC+AGG | 0.489804 | 5_3:+46684840 | Msa0814490:CDS |
GTCGGAGAACCAACAAAAGA+TGG | 0.491626 | 5_3:+46682430 | Msa0814490:CDS |
TTGATGTTTGCATGGGAGGT+CGG | 0.491938 | 5_3:+46684756 | Msa0814490:CDS |
GAAGTATGAGCTCAGAAACT+AGG | 0.492327 | 5_3:+46684933 | Msa0814490:CDS |
TTGGATAGTCATTAAAAGAG+TGG | 0.492362 | 5_3:+46685212 | Msa0814490:three_prime_UTR |
GGAACAGAATTATGTAGAGA+AGG | 0.492840 | 5_3:-46685369 | None:intergenic |
AAGGAAGAGAGTAGTATAAG+TGG | 0.493469 | 5_3:+46682388 | Msa0814490:CDS |
TCGAAGTAATCGTGACTGAC+GGG | 0.496323 | 5_3:-46684902 | None:intergenic |
ACAGAATTCTTATGCAGAGA+TGG | 0.497571 | 5_3:-46681516 | None:intergenic |
TATTCTAACCACCCATCAAA+AGG | 0.498742 | 5_3:+46685015 | Msa0814490:CDS |
GCACTGGAGAAGATTATAAT+GGG | 0.498763 | 5_3:+46684524 | Msa0814490:CDS |
GTTTGCCACCAAGACAAGTA+AGG | 0.501389 | 5_3:-46683726 | None:intergenic |
CAGGCAACTATTGTTCCTCA+TGG | 0.509033 | 5_3:+46684659 | Msa0814490:CDS |
AGGTTCAGCTTCAGCTGCAT+TGG | 0.514430 | 5_3:-46685521 | None:intergenic |
TTAGTTGCAATTTATACTGA+TGG | 0.514520 | 5_3:+46684620 | Msa0814490:CDS |
CTAAGGCATGGCCACACTCA+TGG | 0.515161 | 5_3:-46684601 | None:intergenic |
TGCTGCCCTGAGGGCAGCAA+AGG | 0.515379 | 5_3:+46684463 | Msa0814490:CDS |
GCCCTGAGGGCAGCAAAGGA+CGG | 0.515401 | 5_3:+46684467 | Msa0814490:CDS |
TTAAAGATTTACTTGCAAAT+GGG | 0.515899 | 5_3:+46685095 | Msa0814490:CDS |
CAGCGCCTTACTTGTCTTGG+TGG | 0.520147 | 5_3:+46683721 | Msa0814490:intron |
CTTGTTGAAGTGAAGAATAG+AGG | 0.521177 | 5_3:-46685391 | None:intergenic |
AATGAAGGCATAATTGTGAT+TGG | 0.521492 | 5_3:+46684051 | Msa0814490:CDS |
TTTAGTACTTGTCTCTACAC+TGG | 0.523834 | 5_3:-46682751 | None:intergenic |
GCCAGACTTGATGTTTGCAT+GGG | 0.523864 | 5_3:+46684749 | Msa0814490:CDS |
TTTCTGAACACTCTACTAAG+AGG | 0.524551 | 5_3:+46681597 | Msa0814490:CDS |
AAGATTGCTCAGTTTACACC+TGG | 0.526268 | 5_3:+46684404 | Msa0814490:CDS |
CAGAATTCTTATGCAGAGAT+GGG | 0.528298 | 5_3:-46681515 | None:intergenic |
GATTTCCTAGATATCTGGAC+TGG | 0.530218 | 5_3:-46681386 | None:intergenic |
CAAAGCCTTATCTATTGACT+CGG | 0.531459 | 5_3:-46684088 | None:intergenic |
AGGCAACTATTGTTCCTCAT+GGG | 0.531495 | 5_3:+46684660 | Msa0814490:CDS |
AATTTATCAATCTGAGGCCG+AGG | 0.534387 | 5_3:+46685453 | Msa0814490:three_prime_UTR |
AATCCATCAAGCTCGAATGC+AGG | 0.537537 | 5_3:+46679890 | Msa0814490:CDS |
GAATTTGAAGAGACGATTGT+TGG | 0.538552 | 5_3:+46683856 | Msa0814490:CDS |
CATGAGGAACAATAGTTGCC+TGG | 0.538731 | 5_3:-46684658 | None:intergenic |
CTTGGTGGCAAACTCCCAAA+AGG | 0.541354 | 5_3:+46683736 | Msa0814490:CDS |
CATTATAATTTATCAATCTG+AGG | 0.541432 | 5_3:+46685447 | Msa0814490:three_prime_UTR |
ATTGATGATATGTGATGGAA+TGG | 0.541468 | 5_3:+46685153 | Msa0814490:CDS |
GGTTAATATTGCTGCCCTGA+GGG | 0.542120 | 5_3:+46684454 | Msa0814490:CDS |
TTTAATGACTATCCAAACAA+TGG | 0.544106 | 5_3:-46685205 | None:intergenic |
ATTAAAAGAGTGGAATGGAA+TGG | 0.547285 | 5_3:+46685222 | Msa0814490:three_prime_UTR |
TCATGGGGAGTCTCGTGGCA+GGG | 0.550550 | 5_3:+46684676 | Msa0814490:CDS |
ATATCTAGTAACCATTTGCC+TGG | 0.551309 | 5_3:-46684858 | None:intergenic |
AATGCAGCAACCTTATCGAC+AGG | 0.552427 | 5_3:-46682475 | None:intergenic |
AGACTTGATGTTTGCATGGG+AGG | 0.552431 | 5_3:+46684752 | Msa0814490:CDS |
GCTTTCATATGCTCTAATCA+CGG | 0.554866 | 5_3:-46681490 | None:intergenic |
GTTTGTGGCATCTGAAGCCT+CGG | 0.557506 | 5_3:-46685470 | None:intergenic |
TCAAACTTCTTAGGTATGAG+TGG | 0.557616 | 5_3:+46685546 | Msa0814490:three_prime_UTR |
AGCAAAATGAGTGTAAGTGA+TGG | 0.559475 | 5_3:-46685265 | None:intergenic |
GATAAGGCTTTGTTGAGACA+TGG | 0.561242 | 5_3:+46684099 | Msa0814490:CDS |
TTCCTCTTGATATGTGGTGT+AGG | 0.563915 | 5_3:+46682556 | Msa0814490:CDS |
GGGGCCTTCCTCTTGATATG+TGG | 0.564222 | 5_3:+46682550 | Msa0814490:CDS |
TGATTACCTAAAAGATCCTA+AGG | 0.564376 | 5_3:+46682827 | Msa0814490:CDS |
GGAGCTTCATCTGCTTGCAA+AGG | 0.564622 | 5_3:+46685036 | Msa0814490:CDS |
TGTTGGTGTTGGTGCACAAA+GGG | 0.568480 | 5_3:+46683873 | Msa0814490:CDS |
AGTCACGATTACTTCGATAA+CGG | 0.569236 | 5_3:+46684908 | Msa0814490:CDS |
GATGAGATTGATGCTATTGG+CGG | 0.572769 | 5_3:+46683949 | Msa0814490:CDS |
ACTAAATTTAGCGATGTGAA+AGG | 0.574466 | 5_3:+46682768 | Msa0814490:CDS |
TATGGTATGAGTACTGAAGT+TGG | 0.576069 | 5_3:+46684878 | Msa0814490:CDS |
GTCACGTGTAGTCAAAGCTA+AGG | 0.578881 | 5_3:+46685120 | Msa0814490:CDS |
TTTGGAATCTCACATGTCAA+AGG | 0.582178 | 5_3:+46684179 | Msa0814490:CDS |
GAAGAGACGATTGTTGGTGT+TGG | 0.584279 | 5_3:+46683862 | Msa0814490:CDS |
TTAGTACTTGTCTCTACACT+GGG | 0.586230 | 5_3:-46682750 | None:intergenic |
TAGTCATTAAAAGAGTGGAA+TGG | 0.586263 | 5_3:+46685217 | Msa0814490:three_prime_UTR |
TGGTGCGAATCCTGTTCACC+AGG | 0.588541 | 5_3:+46684640 | Msa0814490:CDS |
ATTTCCTAGATATCTGGACT+GGG | 0.590427 | 5_3:-46681385 | None:intergenic |
CATACCTAAGAAGTTTGAGA+AGG | 0.591374 | 5_3:-46685541 | None:intergenic |
CAATATTAACCAAGTTTGCA+AGG | 0.592799 | 5_3:-46684442 | None:intergenic |
TCGGAGAACCAACAAAAGAT+GGG | 0.593694 | 5_3:+46682431 | Msa0814490:CDS |
CAAGTCAGTTGTTATATCTG+AGG | 0.594506 | 5_3:+46684556 | Msa0814490:CDS |
CTCCTACACCACATATCAAG+AGG | 0.594875 | 5_3:-46682558 | None:intergenic |
CTTATTCCGCCCAAATCGGA+TGG | 0.595359 | 5_3:-46685290 | None:intergenic |
TTGTTGAAGTGAAGAATAGA+GGG | 0.595631 | 5_3:-46685390 | None:intergenic |
ATCGAAGTAATCGTGACTGA+CGG | 0.598660 | 5_3:-46684903 | None:intergenic |
TATAAATTGCAACTAAGGCA+TGG | 0.600410 | 5_3:-46684613 | None:intergenic |
TTTGGATTGATGATATGTGA+TGG | 0.600415 | 5_3:+46685148 | Msa0814490:CDS |
ATAAGGCTTTGTTGAGACAT+GGG | 0.601738 | 5_3:+46684100 | Msa0814490:CDS |
GCTTCAGATGAATCGCGTAG+TGG | 0.601859 | 5_3:-46681417 | None:intergenic |
ACATGATTTAGAGTTCGCAC+TGG | 0.603698 | 5_3:+46684508 | Msa0814490:CDS |
TCATCAATAAAGATTATACA+AGG | 0.608650 | 5_3:-46683931 | None:intergenic |
GTTGCAGCTCTTATAAATGT+CGG | 0.609993 | 5_3:+46682412 | Msa0814490:CDS |
CGATGTGAAAGGTGTAGATG+AGG | 0.614088 | 5_3:+46682779 | Msa0814490:CDS |
CAATACGATACAGGTTCTGA+AGG | 0.615787 | 5_3:+46684361 | Msa0814490:intron |
CTGGATTGGGAACAACAACA+TGG | 0.618453 | 5_3:-46684134 | None:intergenic |
TGGTTAATATTGCTGCCCTG+AGG | 0.618865 | 5_3:+46684453 | Msa0814490:CDS |
GTTCCTCATGGGGAGTCTCG+TGG | 0.619091 | 5_3:+46684671 | Msa0814490:CDS |
TGGCACCGGTAAAACAATGT+TGG | 0.623177 | 5_3:+46683780 | Msa0814490:CDS |
GAATTATGTAGAGAAGGTAA+GGG | 0.625145 | 5_3:-46685363 | None:intergenic |
GGTGAGCGCTATTGCTGGAG+AGG | 0.626219 | 5_3:+46683801 | Msa0814490:CDS |
TTGTTGGTGTTGGTGCACAA+AGG | 0.629062 | 5_3:+46683872 | Msa0814490:CDS |
TACACCACATATCAAGAGGA+AGG | 0.629685 | 5_3:-46682554 | None:intergenic |
TGATATGTGATGGAATGGAA+TGG | 0.629685 | 5_3:+46685158 | Msa0814490:CDS |
GAAAGGTGTAGATGAGGCTA+AGG | 0.630293 | 5_3:+46682785 | Msa0814490:CDS |
ACGCGATTCATCTGAAGCAG+AGG | 0.632043 | 5_3:+46681422 | Msa0814490:CDS |
AAAGCCTTATCTATTGACTC+GGG | 0.633995 | 5_3:-46684087 | None:intergenic |
GCGTCAATCTGAATTTGTGA+AGG | 0.636953 | 5_3:+46681046 | Msa0814490:CDS |
TGCTTACCATCCGATTTGGG+CGG | 0.639738 | 5_3:+46685284 | Msa0814490:three_prime_UTR |
AAGACTGCTTTCCATGAGTG+TGG | 0.644163 | 5_3:+46684590 | Msa0814490:CDS |
TGGAATGGAATGGAACTCAA+TGG | 0.648149 | 5_3:+46685232 | Msa0814490:three_prime_UTR |
ATCTCTGCATAAGAATTCTG+TGG | 0.650157 | 5_3:+46681518 | Msa0814490:CDS |
CCAATCCAGATGTAAAAGGA+CGG | 0.652622 | 5_3:+46684148 | Msa0814490:CDS |
AGATTGCTCAGTTTACACCT+GGG | 0.655104 | 5_3:+46684405 | Msa0814490:CDS |
GGCAACTATTGTTCCTCATG+GGG | 0.655368 | 5_3:+46684661 | Msa0814490:CDS |
CTTCTTAGGTATGAGTGGAG+TGG | 0.657949 | 5_3:+46685551 | Msa0814490:three_prime_UTR |
GTGTATAAAGGAATTAACAC+AGG | 0.680099 | 5_3:+46682589 | Msa0814490:CDS |
AGGTCAGCACCAGAGAACCC+AGG | 0.693794 | 5_3:-46684422 | None:intergenic |
CTGCCACGAGACTCCCCATG+AGG | 0.695426 | 5_3:-46684674 | None:intergenic |
CTTGATGGATTGAAGAAGTG+AGG | 0.699565 | 5_3:-46679878 | None:intergenic |
GATGGATTGAAGAAGTGAGG+TGG | 0.717287 | 5_3:-46679875 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTATAGAAAGAAAAAAAA+AGG | - | chr5_3:46682708-46682727 | None:intergenic | 10.0% |
!!! | ATAAGTTGAAAAAAGTTTTA+TGG | + | chr5_3:46680206-46680225 | Msa0814490:intron | 15.0% |
!! | TTAAATAGTATCAATTGTTT+CGG | + | chr5_3:46680810-46680829 | Msa0814490:intron | 15.0% |
!! | TAACAGCATAAAAAATAAAA+AGG | - | chr5_3:46683536-46683555 | None:intergenic | 15.0% |
!! | TATAATATAACTTGAAAAGT+AGG | - | chr5_3:46683627-46683646 | None:intergenic | 15.0% |
!! | TAAATTAAAATTCCATTGTT+TGG | + | chr5_3:46685193-46685212 | Msa0814490:exon | 15.0% |
!! | AGCAAATTTCAATACATATA+GGG | + | chr5_3:46680077-46680096 | Msa0814490:intron | 20.0% |
!! | TTTGATAAACAACTTATTTG+CGG | + | chr5_3:46680110-46680129 | Msa0814490:intron | 20.0% |
!! | AATAAGCTATTTATCCAAAT+AGG | - | chr5_3:46680339-46680358 | None:intergenic | 20.0% |
!! | TTTCAAATTATTAGTTGTGT+CGG | - | chr5_3:46680516-46680535 | None:intergenic | 20.0% |
!!! | GTTGTTTTTATAAGCTATAT+TGG | + | chr5_3:46680642-46680661 | Msa0814490:intron | 20.0% |
!!! | AAAATCAATAATAGTTTGCT+AGG | - | chr5_3:46681309-46681328 | None:intergenic | 20.0% |
!!! | TTGATTTTAGATATTTCTTG+TGG | + | chr5_3:46681321-46681340 | Msa0814490:intron | 20.0% |
!!! | ATTGATCGTAATATTTTGTT+GGG | + | chr5_3:46682083-46682102 | Msa0814490:intron | 20.0% |
!! | CTTAGATCTATATAAGATTA+TGG | - | chr5_3:46682197-46682216 | None:intergenic | 20.0% |
!! | AATCTTATATAGATCTAAGT+TGG | + | chr5_3:46682198-46682217 | Msa0814490:intron | 20.0% |
!!! | GAGAAGTTTTATTATTCTTT+GGG | + | chr5_3:46682977-46682996 | Msa0814490:intron | 20.0% |
!!! | AACTTTTACTTATTTCTGTT+TGG | - | chr5_3:46683073-46683092 | None:intergenic | 20.0% |
!! | AGAAATAAGTAAAAGTTGTT+GGG | + | chr5_3:46683076-46683095 | Msa0814490:intron | 20.0% |
!! | AAGAGAACAGAAAAAAAATA+AGG | - | chr5_3:46683460-46683479 | None:intergenic | 20.0% |
!! | AAATACATCATAGATTTCAA+AGG | - | chr5_3:46683595-46683614 | None:intergenic | 20.0% |
!! | TCATCAATAAAGATTATACA+AGG | - | chr5_3:46683934-46683953 | None:intergenic | 20.0% |
!! | ACTCTTGAAAAATATTATCT+TGG | + | chr5_3:46684211-46684230 | Msa0814490:intron | 20.0% |
!! | CTCTTGAAAAATATTATCTT+GGG | + | chr5_3:46684212-46684231 | Msa0814490:intron | 20.0% |
!!! | CACAATTTTGAGATATATTA+AGG | + | chr5_3:46684275-46684294 | Msa0814490:intron | 20.0% |
!! | ATTAAAGATTTACTTGCAAA+TGG | + | chr5_3:46685094-46685113 | Msa0814490:CDS | 20.0% |
!! | TTAAAGATTTACTTGCAAAT+GGG | + | chr5_3:46685095-46685114 | Msa0814490:CDS | 20.0% |
!! | CATTATAATTTATCAATCTG+AGG | + | chr5_3:46685447-46685466 | Msa0814490:three_prime_UTR | 20.0% |
! | GAGCAAATTTCAATACATAT+AGG | + | chr5_3:46680076-46680095 | Msa0814490:intron | 25.0% |
! | ATCCAAACAAACCATATATA+TGG | + | chr5_3:46680313-46680332 | Msa0814490:intron | 25.0% |
! | CATATACAAAAAACAGTTTG+AGG | - | chr5_3:46680450-46680469 | None:intergenic | 25.0% |
!!! | TAAGTTTTGTAAGACTGTTT+GGG | - | chr5_3:46680733-46680752 | None:intergenic | 25.0% |
!!! | ATAAGTTTTGTAAGACTGTT+TGG | - | chr5_3:46680734-46680753 | None:intergenic | 25.0% |
! | TTTAATAGTCAATTCCACTA+TGG | - | chr5_3:46680795-46680814 | None:intergenic | 25.0% |
! | ATATTCTTGGTATACTAATC+AGG | + | chr5_3:46680874-46680893 | Msa0814490:intron | 25.0% |
!!! | ATCTTATAAGTTATTTTCGC+AGG | + | chr5_3:46681016-46681035 | Msa0814490:intron | 25.0% |
! | CATAAGTTTGAAAAGTTTGA+AGG | + | chr5_3:46681104-46681123 | Msa0814490:CDS | 25.0% |
! | ACTTACTCTCAAATTTATGT+AGG | + | chr5_3:46681345-46681364 | Msa0814490:intron | 25.0% |
! | CTTACTCTCAAATTTATGTA+GGG | + | chr5_3:46681346-46681365 | Msa0814490:intron | 25.0% |
!! | GTTAAAGCATTAGTAAAAGT+TGG | + | chr5_3:46681555-46681574 | Msa0814490:CDS | 25.0% |
!! | CATTGATCGTAATATTTTGT+TGG | + | chr5_3:46682082-46682101 | Msa0814490:intron | 25.0% |
!! | TTGATCGTAATATTTTGTTG+GGG | + | chr5_3:46682084-46682103 | Msa0814490:intron | 25.0% |
! | ATCATAAAACTTGCATTTCA+AGG | + | chr5_3:46682140-46682159 | Msa0814490:intron | 25.0% |
! | AAATATGTAATCAACGAGAT+TGG | - | chr5_3:46682949-46682968 | None:intergenic | 25.0% |
! | AAGAATAATAAAACTTCTCG+TGG | - | chr5_3:46682976-46682995 | None:intergenic | 25.0% |
!!! | CGAGAAGTTTTATTATTCTT+TGG | + | chr5_3:46682976-46682995 | Msa0814490:intron | 25.0% |
! | TGAACACTATTTCATAACTT+TGG | - | chr5_3:46683018-46683037 | None:intergenic | 25.0% |
! | CAGAAATAAGTAAAAGTTGT+TGG | + | chr5_3:46683075-46683094 | Msa0814490:intron | 25.0% |
! | TGAAAAATATTATCTTGGGT+TGG | + | chr5_3:46684216-46684235 | Msa0814490:intron | 25.0% |
!! | TTTGAGATATATTAAGGTTC+TGG | + | chr5_3:46684281-46684300 | Msa0814490:intron | 25.0% |
! | TAGAATTGTTAGAACTTAGA+AGG | + | chr5_3:46684308-46684327 | Msa0814490:intron | 25.0% |
! | ATCAGTATAAATTGCAACTA+AGG | - | chr5_3:46684621-46684640 | None:intergenic | 25.0% |
! | TTAGTTGCAATTTATACTGA+TGG | + | chr5_3:46684620-46684639 | Msa0814490:CDS | 25.0% |
! | TTTAATGACTATCCAAACAA+TGG | - | chr5_3:46685208-46685227 | None:intergenic | 25.0% |
TTGAATTTGATCATGCACTA+AGG | + | chr5_3:46679946-46679965 | Msa0814490:intron | 30.0% | |
AACCATATATATGGCCTATT+TGG | + | chr5_3:46680322-46680341 | Msa0814490:intron | 30.0% | |
ATCCAAATAGGCCATATATA+TGG | - | chr5_3:46680327-46680346 | None:intergenic | 30.0% | |
TTCAGTGTAATTACAAGTGT+CGG | + | chr5_3:46680547-46680566 | Msa0814490:intron | 30.0% | |
GAAAATAAGCTGAAAAAAGC+TGG | + | chr5_3:46680674-46680693 | Msa0814490:intron | 30.0% | |
TCAAATAAGTCAATCCAAAC+AGG | + | chr5_3:46680768-46680787 | Msa0814490:intron | 30.0% | |
CAAATAAGTCAATCCAAACA+GGG | + | chr5_3:46680769-46680788 | Msa0814490:intron | 30.0% | |
! | GCGTCAATTTTGAATATTCT+TGG | + | chr5_3:46680861-46680880 | Msa0814490:intron | 30.0% |
AACATAACATGCAGTAAATG+CGG | - | chr5_3:46681160-46681179 | None:intergenic | 30.0% | |
ATGAAACACATGGTGAAAAT+AGG | - | chr5_3:46681283-46681302 | None:intergenic | 30.0% | |
CTCAAATTTATGTAGGGAAT+AGG | + | chr5_3:46681352-46681371 | Msa0814490:intron | 30.0% | |
! | GTAAAGTTCTTTAAGAGAAG+AGG | - | chr5_3:46681451-46681470 | None:intergenic | 30.0% |
ATTAGAATGTCCGCAAAATA+TGG | - | chr5_3:46681694-46681713 | None:intergenic | 30.0% | |
GAACCTCAAATAATAACACT+CGG | - | chr5_3:46681897-46681916 | None:intergenic | 30.0% | |
TTCATTTGCATATTGCCAAA+TGG | + | chr5_3:46682037-46682056 | Msa0814490:intron | 30.0% | |
TAAAACTTGCATTTCAAGGA+TGG | + | chr5_3:46682144-46682163 | Msa0814490:intron | 30.0% | |
AAAACTTGCATTTCAAGGAT+GGG | + | chr5_3:46682145-46682164 | Msa0814490:intron | 30.0% | |
AGGATGGGATAATTAAATGA+TGG | + | chr5_3:46682160-46682179 | Msa0814490:intron | 30.0% | |
AAAATTTCAAAGCGCAACTA+TGG | + | chr5_3:46682506-46682525 | Msa0814490:CDS | 30.0% | |
!! | ATACAATTTGGTTTGTTGCA+GGG | + | chr5_3:46682530-46682549 | Msa0814490:CDS | 30.0% |
GTGTATAAAGGAATTAACAC+AGG | + | chr5_3:46682589-46682608 | Msa0814490:CDS | 30.0% | |
ACTAAATTTAGCGATGTGAA+AGG | + | chr5_3:46682768-46682787 | Msa0814490:CDS | 30.0% | |
TGATTACCTAAAAGATCCTA+AGG | + | chr5_3:46682827-46682846 | Msa0814490:CDS | 30.0% | |
TTACTTATTCAGTCCAACTA+AGG | - | chr5_3:46683203-46683222 | None:intergenic | 30.0% | |
GCTTATTGCTAATAAACGTA+AGG | + | chr5_3:46683234-46683253 | Msa0814490:intron | 30.0% | |
GTGGTAAAAAAAGTAGAAAG+TGG | + | chr5_3:46683285-46683304 | Msa0814490:intron | 30.0% | |
!!! | TTTTTTTCAAGACCACATTC+TGG | + | chr5_3:46683652-46683671 | Msa0814490:intron | 30.0% |
AAGATAGTACAGAACTAAAC+AGG | - | chr5_3:46683678-46683697 | None:intergenic | 30.0% | |
! | CATAAAGCAAAACACCTTTT+GGG | - | chr5_3:46683753-46683772 | None:intergenic | 30.0% |
ATTGATGAGATTGATGCTAT+TGG | + | chr5_3:46683946-46683965 | Msa0814490:CDS | 30.0% | |
TACATTTGGTCGTTTGAATT+TGG | - | chr5_3:46683979-46683998 | None:intergenic | 30.0% | |
GATGGTTTCAAACAAAATGA+AGG | + | chr5_3:46684036-46684055 | Msa0814490:CDS | 30.0% | |
! | AATGAAGGCATAATTGTGAT+TGG | + | chr5_3:46684051-46684070 | Msa0814490:CDS | 30.0% |
!! | AAATATTATCTTGGGTTGGA+TGG | + | chr5_3:46684220-46684239 | Msa0814490:intron | 30.0% |
!!! | GATGGCTTAAGAATTTTTTG+AGG | + | chr5_3:46684238-46684257 | Msa0814490:intron | 30.0% |
CAATATTAACCAAGTTTGCA+AGG | - | chr5_3:46684445-46684464 | None:intergenic | 30.0% | |
TATAAATTGCAACTAAGGCA+TGG | - | chr5_3:46684616-46684635 | None:intergenic | 30.0% | |
! | TTTGGATTGATGATATGTGA+TGG | + | chr5_3:46685148-46685167 | Msa0814490:CDS | 30.0% |
! | ATTGATGATATGTGATGGAA+TGG | + | chr5_3:46685153-46685172 | Msa0814490:CDS | 30.0% |
TTGGATAGTCATTAAAAGAG+TGG | + | chr5_3:46685212-46685231 | Msa0814490:three_prime_UTR | 30.0% | |
TAGTCATTAAAAGAGTGGAA+TGG | + | chr5_3:46685217-46685236 | Msa0814490:three_prime_UTR | 30.0% | |
ATTAAAAGAGTGGAATGGAA+TGG | + | chr5_3:46685222-46685241 | Msa0814490:three_prime_UTR | 30.0% | |
GAATTATGTAGAGAAGGTAA+GGG | - | chr5_3:46685366-46685385 | None:intergenic | 30.0% | |
AGAATTATGTAGAGAAGGTA+AGG | - | chr5_3:46685367-46685386 | None:intergenic | 30.0% | |
TTGTTGAAGTGAAGAATAGA+GGG | - | chr5_3:46685393-46685412 | None:intergenic | 30.0% | |
ACCTTATCGAAAAACAGAAT+TGG | + | chr5_3:46685609-46685628 | Msa0814490:three_prime_UTR | 30.0% | |
!! | TCCAATTCTGTTTTTCGATA+AGG | - | chr5_3:46685613-46685632 | None:intergenic | 30.0% |
ACTGAAACAGTAGTGATACA+TGG | - | chr5_3:46680043-46680062 | None:intergenic | 35.0% | |
ATCACTACTGTTTCAGTTTC+TGG | + | chr5_3:46680046-46680065 | Msa0814490:intron | 35.0% | |
!! | GGCCATATATATGGTTTGTT+TGG | - | chr5_3:46680318-46680337 | None:intergenic | 35.0% |
CATGATAAACGCTTATGCAT+AGG | + | chr5_3:46680386-46680405 | Msa0814490:intron | 35.0% | |
ATGCTATAAGCTATGAAGCA+CGG | + | chr5_3:46680467-46680486 | Msa0814490:intron | 35.0% | |
AACATATAGCCTATGAAGCA+CGG | - | chr5_3:46680625-46680644 | None:intergenic | 35.0% | |
!! | TTCGGTACTGGTATCATAAT+TGG | + | chr5_3:46680917-46680936 | Msa0814490:intron | 35.0% |
TACAACGCAGAGATAGAAAT+TGG | - | chr5_3:46680969-46680988 | None:intergenic | 35.0% | |
!! | AGTTATTTTCGCAGGTTGAA+AGG | + | chr5_3:46681024-46681043 | Msa0814490:intron | 35.0% |
ATTTCCTAGATATCTGGACT+GGG | - | chr5_3:46681388-46681407 | None:intergenic | 35.0% | |
GCTTTCATATGCTCTAATCA+CGG | - | chr5_3:46681493-46681512 | None:intergenic | 35.0% | |
CAGAATTCTTATGCAGAGAT+GGG | - | chr5_3:46681518-46681537 | None:intergenic | 35.0% | |
ACAGAATTCTTATGCAGAGA+TGG | - | chr5_3:46681519-46681538 | None:intergenic | 35.0% | |
ATCTCTGCATAAGAATTCTG+TGG | + | chr5_3:46681518-46681537 | Msa0814490:CDS | 35.0% | |
AAGCATTAGTAAAAGTTGGC+AGG | + | chr5_3:46681559-46681578 | Msa0814490:CDS | 35.0% | |
TTTCTGAACACTCTACTAAG+AGG | + | chr5_3:46681597-46681616 | Msa0814490:CDS | 35.0% | |
! | CTCTGTTTGACCATATTTTG+CGG | + | chr5_3:46681681-46681700 | Msa0814490:intron | 35.0% |
GGACATTCTAATTCTGTTCA+AGG | + | chr5_3:46681702-46681721 | Msa0814490:intron | 35.0% | |
! | CTGATTTGATTAGAAAGCTG+AGG | + | chr5_3:46681782-46681801 | Msa0814490:intron | 35.0% |
! | TGCCTTCAGTCTTTTTACTT+GGG | - | chr5_3:46681839-46681858 | None:intergenic | 35.0% |
AAGTAAAAAGACTGAAGGCA+CGG | + | chr5_3:46681839-46681858 | Msa0814490:intron | 35.0% | |
! | ATGCCGAGTGTTATTATTTG+AGG | + | chr5_3:46681891-46681910 | Msa0814490:intron | 35.0% |
GATCAATGCTACCACATAAA+TGG | - | chr5_3:46682070-46682089 | None:intergenic | 35.0% | |
AGTCTGCAGAATTCAAAACT+TGG | + | chr5_3:46682221-46682240 | Msa0814490:intron | 35.0% | |
CTCAGGTTATAACTTGAGAT+CGG | - | chr5_3:46682332-46682351 | None:intergenic | 35.0% | |
TATTTCTCATTCAGCGAGAA+AGG | + | chr5_3:46682369-46682388 | Msa0814490:CDS | 35.0% | |
AAGGAAGAGAGTAGTATAAG+TGG | + | chr5_3:46682388-46682407 | Msa0814490:CDS | 35.0% | |
GTTGCAGCTCTTATAAATGT+CGG | + | chr5_3:46682412-46682431 | Msa0814490:CDS | 35.0% | |
!! | CATACAATTTGGTTTGTTGC+AGG | + | chr5_3:46682529-46682548 | Msa0814490:CDS | 35.0% |
!! | TACAATTTGGTTTGTTGCAG+GGG | + | chr5_3:46682531-46682550 | Msa0814490:CDS | 35.0% |
TTAGTACTTGTCTCTACACT+GGG | - | chr5_3:46682753-46682772 | None:intergenic | 35.0% | |
TTTAGTACTTGTCTCTACAC+TGG | - | chr5_3:46682754-46682773 | None:intergenic | 35.0% | |
! | AGTCTACCTTAGGATCTTTT+AGG | - | chr5_3:46682836-46682855 | None:intergenic | 35.0% |
AATACAAGTAAGAGAGAGCA+TGG | - | chr5_3:46682873-46682892 | None:intergenic | 35.0% | |
!! | GTTTTATTATTCTTTGGGCG+TGG | + | chr5_3:46682982-46683001 | Msa0814490:intron | 35.0% |
GGAGACATATAGAAAACCTA+AGG | - | chr5_3:46683169-46683188 | None:intergenic | 35.0% | |
CCAACTAAGGTAAAATGACA+AGG | - | chr5_3:46683190-46683209 | None:intergenic | 35.0% | |
!!! | CCTTGTCATTTTACCTTAGT+TGG | + | chr5_3:46683187-46683206 | Msa0814490:intron | 35.0% |
AAACCCAAAACAAATTCTGC+CGG | + | chr5_3:46683318-46683337 | Msa0814490:intron | 35.0% | |
GAGAAAAAGAAATGAGAGTC+CGG | - | chr5_3:46683340-46683359 | None:intergenic | 35.0% | |
AGCAGCATTTGAAAGTTTGA+AGG | - | chr5_3:46683372-46683391 | None:intergenic | 35.0% | |
! | CCATAAAGCAAAACACCTTT+TGG | - | chr5_3:46683754-46683773 | None:intergenic | 35.0% |
!!! | CCAAAAGGTGTTTTGCTTTA+TGG | + | chr5_3:46683751-46683770 | Msa0814490:CDS | 35.0% |
GAATTTGAAGAGACGATTGT+TGG | + | chr5_3:46683856-46683875 | Msa0814490:CDS | 35.0% | |
AAGTCAACTTCACGTACATT+TGG | - | chr5_3:46683993-46684012 | None:intergenic | 35.0% | |
!! | AAAGCCTTATCTATTGACTC+GGG | - | chr5_3:46684090-46684109 | None:intergenic | 35.0% |
! | CAAAGCCTTATCTATTGACT+CGG | - | chr5_3:46684091-46684110 | None:intergenic | 35.0% |
!! | ATAAGGCTTTGTTGAGACAT+GGG | + | chr5_3:46684100-46684119 | Msa0814490:CDS | 35.0% |
! | TTTGGAATCTCACATGTCAA+AGG | + | chr5_3:46684179-46684198 | Msa0814490:CDS | 35.0% |
TTCTTACTCCAATACGATAC+AGG | + | chr5_3:46684352-46684371 | Msa0814490:intron | 35.0% | |
GCACTGGAGAAGATTATAAT+GGG | + | chr5_3:46684524-46684543 | Msa0814490:CDS | 35.0% | |
CAAGTCAGTTGTTATATCTG+AGG | + | chr5_3:46684556-46684575 | Msa0814490:CDS | 35.0% | |
ATTTGCCTAAAGATCAGAAC+AGG | + | chr5_3:46684705-46684724 | Msa0814490:CDS | 35.0% | |
! | GTTGCTGAAGAGCTAATTTT+CGG | + | chr5_3:46684779-46684798 | Msa0814490:CDS | 35.0% |
ATATCTAGTAACCATTTGCC+TGG | - | chr5_3:46684861-46684880 | None:intergenic | 35.0% | |
AGGCAAATGGTTACTAGATA+TGG | + | chr5_3:46684860-46684879 | Msa0814490:CDS | 35.0% | |
!! | TATGGTATGAGTACTGAAGT+TGG | + | chr5_3:46684878-46684897 | Msa0814490:CDS | 35.0% |
AGTCACGATTACTTCGATAA+CGG | + | chr5_3:46684908-46684927 | Msa0814490:CDS | 35.0% | |
TATTCTAACCACCCATCAAA+AGG | + | chr5_3:46685015-46685034 | Msa0814490:CDS | 35.0% | |
! | TGATATGTGATGGAATGGAA+TGG | + | chr5_3:46685158-46685177 | Msa0814490:CDS | 35.0% |
AGCAAAATGAGTGTAAGTGA+TGG | - | chr5_3:46685268-46685287 | None:intergenic | 35.0% | |
! | ATTTTGCTTACCATCCGATT+TGG | + | chr5_3:46685280-46685299 | Msa0814490:three_prime_UTR | 35.0% |
! | TTTTGCTTACCATCCGATTT+GGG | + | chr5_3:46685281-46685300 | Msa0814490:three_prime_UTR | 35.0% |
GGAACAGAATTATGTAGAGA+AGG | - | chr5_3:46685372-46685391 | None:intergenic | 35.0% | |
CTTGTTGAAGTGAAGAATAG+AGG | - | chr5_3:46685394-46685413 | None:intergenic | 35.0% | |
TGAACCTTCTCAAACTTCTT+AGG | + | chr5_3:46685537-46685556 | Msa0814490:three_prime_UTR | 35.0% | |
CATACCTAAGAAGTTTGAGA+AGG | - | chr5_3:46685544-46685563 | None:intergenic | 35.0% | |
TCAAACTTCTTAGGTATGAG+TGG | + | chr5_3:46685546-46685565 | Msa0814490:three_prime_UTR | 35.0% | |
!! | CTGTTTTTCGATAAGGTGAA+CGG | - | chr5_3:46685606-46685625 | None:intergenic | 35.0% |
!! | CTTGATGGATTGAAGAAGTG+AGG | - | chr5_3:46679881-46679900 | None:intergenic | 40.0% |
TTGCGGCTTATAAGCTCATA+CGG | + | chr5_3:46680127-46680146 | Msa0814490:intron | 40.0% | |
TAAGCTATGAAGCACGGATA+CGG | + | chr5_3:46680473-46680492 | Msa0814490:intron | 40.0% | |
!! | GTAATTACAAGTGTCGGTGT+CGG | + | chr5_3:46680553-46680572 | Msa0814490:intron | 40.0% |
TCTTGGTATACTAATCAGGC+AGG | + | chr5_3:46680878-46680897 | Msa0814490:intron | 40.0% | |
GGCATGTTAACTCGACATTT+CGG | + | chr5_3:46680899-46680918 | Msa0814490:intron | 40.0% | |
TTAACTCGACATTTCGGTAC+TGG | + | chr5_3:46680905-46680924 | Msa0814490:intron | 40.0% | |
GCGTCAATCTGAATTTGTGA+AGG | + | chr5_3:46681046-46681065 | Msa0814490:CDS | 40.0% | |
ACATGCAGTAAATGCGGTAA+GGG | - | chr5_3:46681154-46681173 | None:intergenic | 40.0% | |
AACATGCAGTAAATGCGGTA+AGG | - | chr5_3:46681155-46681174 | None:intergenic | 40.0% | |
TGCTAGGTACATGAAACACA+TGG | - | chr5_3:46681293-46681312 | None:intergenic | 40.0% | |
GATTTCCTAGATATCTGGAC+TGG | - | chr5_3:46681389-46681408 | None:intergenic | 40.0% | |
GTCCAGATATCTAGGAAATC+TGG | + | chr5_3:46681389-46681408 | Msa0814490:CDS | 40.0% | |
TGCCAGATTTCCTAGATATC+TGG | - | chr5_3:46681394-46681413 | None:intergenic | 40.0% | |
! | TGTGTCTAGTTTCCTGATCA+GGG | - | chr5_3:46681743-46681762 | None:intergenic | 40.0% |
! | ATGTGTCTAGTTTCCTGATC+AGG | - | chr5_3:46681744-46681763 | None:intergenic | 40.0% |
ATTGCTACTCTGCCTAATCA+TGG | + | chr5_3:46681807-46681826 | Msa0814490:intron | 40.0% | |
! | GCCTTCAGTCTTTTTACTTG+GGG | - | chr5_3:46681838-46681857 | None:intergenic | 40.0% |
! | GTGCCTTCAGTCTTTTTACT+TGG | - | chr5_3:46681840-46681859 | None:intergenic | 40.0% |
TCTCATTTCCCAAAAACCAG+TGG | + | chr5_3:46681988-46682007 | Msa0814490:intron | 40.0% | |
!!! | AGAGACTTCCACTGGTTTTT+GGG | - | chr5_3:46681999-46682018 | None:intergenic | 40.0% |
AAAAACCAGTGGAAGTCTCT+GGG | + | chr5_3:46681999-46682018 | Msa0814490:intron | 40.0% | |
ATAAATGGCCTGTAGCCATT+TGG | - | chr5_3:46682055-46682074 | None:intergenic | 40.0% | |
CGATCTCAAGTTATAACCTG+AGG | + | chr5_3:46682330-46682349 | Msa0814490:intron | 40.0% | |
GCTGAAAATTCATATGCCTC+AGG | - | chr5_3:46682349-46682368 | None:intergenic | 40.0% | |
TCGGAGAACCAACAAAAGAT+GGG | + | chr5_3:46682431-46682450 | Msa0814490:CDS | 40.0% | |
! | CCAAGAATCCCATCTTTTGT+TGG | - | chr5_3:46682442-46682461 | None:intergenic | 40.0% |
CCAACAAAAGATGGGATTCT+TGG | + | chr5_3:46682439-46682458 | Msa0814490:CDS | 40.0% | |
GATAAGGTTGCTGCATTAGA+AGG | + | chr5_3:46682481-46682500 | Msa0814490:CDS | 40.0% | |
CGCAACTATGGCATACAATT+TGG | + | chr5_3:46682518-46682537 | Msa0814490:CDS | 40.0% | |
TACACCACATATCAAGAGGA+AGG | - | chr5_3:46682557-46682576 | None:intergenic | 40.0% | |
TTCCTCTTGATATGTGGTGT+AGG | + | chr5_3:46682556-46682575 | Msa0814490:CDS | 40.0% | |
ATGCTGGAAAAGTCTACCTT+AGG | - | chr5_3:46682846-46682865 | None:intergenic | 40.0% | |
CAACGAGATTGGAATAGCTT+AGG | - | chr5_3:46682938-46682957 | None:intergenic | 40.0% | |
GGTAATCAGTTCTATTGCTC+TGG | + | chr5_3:46683097-46683116 | Msa0814490:intron | 40.0% | |
TAGCACAGACACTTATCCTT+AGG | + | chr5_3:46683150-46683169 | Msa0814490:intron | 40.0% | |
! | TAAACGTAAGGAGAGTGTAG+TGG | + | chr5_3:46683246-46683265 | Msa0814490:intron | 40.0% |
!! | AGTCCGGCAGAATTTGTTTT+GGG | - | chr5_3:46683324-46683343 | None:intergenic | 40.0% |
!! | GCTCACCAACATTGTTTTAC+CGG | - | chr5_3:46683788-46683807 | None:intergenic | 40.0% |
GTTCCTTTCTTCTCAAGCAA+TGG | + | chr5_3:46683829-46683848 | Msa0814490:CDS | 40.0% | |
GATGAGATTGATGCTATTGG+CGG | + | chr5_3:46683949-46683968 | Msa0814490:CDS | 40.0% | |
! | CAGTTGCTTGTTGAGTTAGA+TGG | + | chr5_3:46684018-46684037 | Msa0814490:CDS | 40.0% |
!! | GATAAGGCTTTGTTGAGACA+TGG | + | chr5_3:46684099-46684118 | Msa0814490:CDS | 40.0% |
GTTCCCAATCCAGATGTAAA+AGG | + | chr5_3:46684144-46684163 | Msa0814490:CDS | 40.0% | |
! | CGTCCTTTTACATCTGGATT+GGG | - | chr5_3:46684150-46684169 | None:intergenic | 40.0% |
CCAATCCAGATGTAAAAGGA+CGG | + | chr5_3:46684148-46684167 | Msa0814490:CDS | 40.0% | |
CTTCAGAACCTGTATCGTAT+TGG | - | chr5_3:46684363-46684382 | None:intergenic | 40.0% | |
! | CAATACGATACAGGTTCTGA+AGG | + | chr5_3:46684361-46684380 | Msa0814490:intron | 40.0% |
AAGATTGCTCAGTTTACACC+TGG | + | chr5_3:46684404-46684423 | Msa0814490:CDS | 40.0% | |
AGATTGCTCAGTTTACACCT+GGG | + | chr5_3:46684405-46684424 | Msa0814490:CDS | 40.0% | |
CTCTAAATCATGTGTGCTCA+CGG | - | chr5_3:46684501-46684520 | None:intergenic | 40.0% | |
! | ACATGATTTAGAGTTCGCAC+TGG | + | chr5_3:46684508-46684527 | Msa0814490:CDS | 40.0% |
CGCACTGGAGAAGATTATAA+TGG | + | chr5_3:46684523-46684542 | Msa0814490:CDS | 40.0% | |
AGGCAACTATTGTTCCTCAT+GGG | + | chr5_3:46684660-46684679 | Msa0814490:CDS | 40.0% | |
! | GAGCTAATTTTCGGACAAAG+TGG | + | chr5_3:46684788-46684807 | Msa0814490:CDS | 40.0% |
GGACAAAGTGGAGTTAATTC+CGG | + | chr5_3:46684800-46684819 | Msa0814490:CDS | 40.0% | |
AAAAAGATCTGAGCATGCAC+CGG | - | chr5_3:46684822-46684841 | None:intergenic | 40.0% | |
ATCGAAGTAATCGTGACTGA+CGG | - | chr5_3:46684906-46684925 | None:intergenic | 40.0% | |
GTCACGATTACTTCGATAAC+GGG | + | chr5_3:46684909-46684928 | Msa0814490:CDS | 40.0% | |
GAAGTATGAGCTCAGAAACT+AGG | + | chr5_3:46684933-46684952 | Msa0814490:CDS | 40.0% | |
! | CAGATGAAGCTCCTTTTGAT+GGG | - | chr5_3:46685029-46685048 | None:intergenic | 40.0% |
GTCAAAGCTAAGGCTATGTT+TGG | + | chr5_3:46685130-46685149 | Msa0814490:CDS | 40.0% | |
TGGAATGGAATGGAACTCAA+TGG | + | chr5_3:46685232-46685251 | Msa0814490:three_prime_UTR | 40.0% | |
TTCTTCGACATATGCAGTGT+TGG | + | chr5_3:46685420-46685439 | Msa0814490:three_prime_UTR | 40.0% | |
! | AATTTATCAATCTGAGGCCG+AGG | + | chr5_3:46685453-46685472 | Msa0814490:three_prime_UTR | 40.0% |
!! | GATGGATTGAAGAAGTGAGG+TGG | - | chr5_3:46679878-46679897 | None:intergenic | 45.0% |
AATCCATCAAGCTCGAATGC+AGG | + | chr5_3:46679890-46679909 | Msa0814490:CDS | 45.0% | |
AAACCTGCATTCGAGCTTGA+TGG | - | chr5_3:46679896-46679915 | None:intergenic | 45.0% | |
AATTCCACTATGGCCCTGTT+TGG | - | chr5_3:46680785-46680804 | None:intergenic | 45.0% | |
TTCTCCCAGTCCAGATATCT+AGG | + | chr5_3:46681381-46681400 | Msa0814490:CDS | 45.0% | |
TATGCTCTAATCACGGCTTC+AGG | - | chr5_3:46681486-46681505 | None:intergenic | 45.0% | |
! | TAAGATTTTCCCCCCTGATC+AGG | + | chr5_3:46681728-46681747 | Msa0814490:intron | 45.0% |
! | TGTCTAGTTTCCTGATCAGG+GGG | - | chr5_3:46681741-46681760 | None:intergenic | 45.0% |
! | GTGTCTAGTTTCCTGATCAG+GGG | - | chr5_3:46681742-46681761 | None:intergenic | 45.0% |
GCCCCAAGTAAAAAGACTGA+AGG | + | chr5_3:46681834-46681853 | Msa0814490:intron | 45.0% | |
!!! | CAGAGACTTCCACTGGTTTT+TGG | - | chr5_3:46682000-46682019 | None:intergenic | 45.0% |
CAAAAACCAGTGGAAGTCTC+TGG | + | chr5_3:46681998-46682017 | Msa0814490:intron | 45.0% | |
ATATACCCAGAGACTTCCAC+TGG | - | chr5_3:46682007-46682026 | None:intergenic | 45.0% | |
AGTGGAAGTCTCTGGGTATA+TGG | + | chr5_3:46682006-46682025 | Msa0814490:intron | 45.0% | |
GCATATTGCCAAATGGCTAC+AGG | + | chr5_3:46682044-46682063 | Msa0814490:intron | 45.0% | |
ATGGCTACAGGCCATTTATG+TGG | + | chr5_3:46682056-46682075 | Msa0814490:intron | 45.0% | |
GTCGGAGAACCAACAAAAGA+TGG | + | chr5_3:46682430-46682449 | Msa0814490:CDS | 45.0% | |
TACAAGTGCTCCTGTCGATA+AGG | + | chr5_3:46682465-46682484 | Msa0814490:CDS | 45.0% | |
AATGCAGCAACCTTATCGAC+AGG | - | chr5_3:46682478-46682497 | None:intergenic | 45.0% | |
CTCCTACACCACATATCAAG+AGG | - | chr5_3:46682561-46682580 | None:intergenic | 45.0% | |
GGAGCTCACATCGTGTATAA+AGG | + | chr5_3:46682577-46682596 | Msa0814490:CDS | 45.0% | |
! | CGATGTGAAAGGTGTAGATG+AGG | + | chr5_3:46682779-46682798 | Msa0814490:CDS | 45.0% |
! | GAAAGGTGTAGATGAGGCTA+AGG | + | chr5_3:46682785-46682804 | Msa0814490:CDS | 45.0% |
! | GAGAGAGCATGGATTAATGC+TGG | - | chr5_3:46682862-46682881 | None:intergenic | 45.0% |
!! | GAGTCCGGCAGAATTTGTTT+TGG | - | chr5_3:46683325-46683344 | None:intergenic | 45.0% |
GAACTAAACAGGCCAGAATG+TGG | - | chr5_3:46683667-46683686 | None:intergenic | 45.0% | |
GTTTGCCACCAAGACAAGTA+AGG | - | chr5_3:46683729-46683748 | None:intergenic | 45.0% | |
!! | AACATTGTTTTACCGGTGCC+AGG | - | chr5_3:46683781-46683800 | None:intergenic | 45.0% |
!! | TGGCACCGGTAAAACAATGT+TGG | + | chr5_3:46683780-46683799 | Msa0814490:CDS | 45.0% |
CGTCCATTGCTTGAGAAGAA+AGG | - | chr5_3:46683835-46683854 | None:intergenic | 45.0% | |
GAAGAGACGATTGTTGGTGT+TGG | + | chr5_3:46683862-46683881 | Msa0814490:CDS | 45.0% | |
!! | TTGTTGGTGTTGGTGCACAA+AGG | + | chr5_3:46683872-46683891 | Msa0814490:CDS | 45.0% |
!! | TGTTGGTGTTGGTGCACAAA+GGG | + | chr5_3:46683873-46683892 | Msa0814490:CDS | 45.0% |
CTCTCCCGAGTCAATAGATA+AGG | + | chr5_3:46684083-46684102 | Msa0814490:CDS | 45.0% | |
! | CTGGATTGGGAACAACAACA+TGG | - | chr5_3:46684137-46684156 | None:intergenic | 45.0% |
! | CCGTCCTTTTACATCTGGAT+TGG | - | chr5_3:46684151-46684170 | None:intergenic | 45.0% |
! | AAAAGGACGGCGAGAGATTT+TGG | + | chr5_3:46684161-46684180 | Msa0814490:CDS | 45.0% |
TGGTTAATATTGCTGCCCTG+AGG | + | chr5_3:46684453-46684472 | Msa0814490:CDS | 45.0% | |
GGTTAATATTGCTGCCCTGA+GGG | + | chr5_3:46684454-46684473 | Msa0814490:CDS | 45.0% | |
AAGACTGCTTTCCATGAGTG+TGG | + | chr5_3:46684590-46684609 | Msa0814490:CDS | 45.0% | |
ACAATAGTTGCCTGGTGAAC+AGG | - | chr5_3:46684653-46684672 | None:intergenic | 45.0% | |
CATGAGGAACAATAGTTGCC+TGG | - | chr5_3:46684661-46684680 | None:intergenic | 45.0% | |
CAGGCAACTATTGTTCCTCA+TGG | + | chr5_3:46684659-46684678 | Msa0814490:CDS | 45.0% | |
GGCAACTATTGTTCCTCATG+GGG | + | chr5_3:46684661-46684680 | Msa0814490:CDS | 45.0% | |
GAGAGCCTGTTCTGATCTTT+AGG | - | chr5_3:46684713-46684732 | None:intergenic | 45.0% | |
TGCCAGACTTGATGTTTGCA+TGG | + | chr5_3:46684748-46684767 | Msa0814490:CDS | 45.0% | |
GCCAGACTTGATGTTTGCAT+GGG | + | chr5_3:46684749-46684768 | Msa0814490:CDS | 45.0% | |
TCCCATGCAAACATCAAGTC+TGG | - | chr5_3:46684753-46684772 | None:intergenic | 45.0% | |
AGACTTGATGTTTGCATGGG+AGG | + | chr5_3:46684752-46684771 | Msa0814490:CDS | 45.0% | |
TTGATGTTTGCATGGGAGGT+CGG | + | chr5_3:46684756-46684775 | Msa0814490:CDS | 45.0% | |
TCGAAGTAATCGTGACTGAC+GGG | - | chr5_3:46684905-46684924 | None:intergenic | 45.0% | |
! | ATGAAGCTCCTTTTGATGGG+TGG | - | chr5_3:46685026-46685045 | None:intergenic | 45.0% |
! | GCAGATGAAGCTCCTTTTGA+TGG | - | chr5_3:46685030-46685049 | None:intergenic | 45.0% |
! | CTGAAGCATCACACACTTAC+AGG | + | chr5_3:46685064-46685083 | Msa0814490:CDS | 45.0% |
GTCACGTGTAGTCAAAGCTA+AGG | + | chr5_3:46685120-46685139 | Msa0814490:CDS | 45.0% | |
CCATCTTATTCCGCCCAAAT+CGG | - | chr5_3:46685297-46685316 | None:intergenic | 45.0% | |
AAACAATGCAGCTGCAGCTT+CGG | + | chr5_3:46685489-46685508 | Msa0814490:three_prime_UTR | 45.0% | |
CTTCTTAGGTATGAGTGGAG+TGG | + | chr5_3:46685551-46685570 | Msa0814490:three_prime_UTR | 45.0% | |
TATGAAGCACGGACACTCCT+CGG | - | chr5_3:46680614-46680633 | None:intergenic | 50.0% | |
CAATCCAAACAGGGCCATAG+TGG | + | chr5_3:46680778-46680797 | Msa0814490:intron | 50.0% | |
GCTTCAGATGAATCGCGTAG+TGG | - | chr5_3:46681420-46681439 | None:intergenic | 50.0% | |
! | ACGCGATTCATCTGAAGCAG+AGG | + | chr5_3:46681422-46681441 | Msa0814490:CDS | 50.0% |
! | GTCTAGTTTCCTGATCAGGG+GGG | - | chr5_3:46681740-46681759 | None:intergenic | 50.0% |
CTTGGGGCACAACCATGATT+AGG | - | chr5_3:46681822-46681841 | None:intergenic | 50.0% | |
! | ACGTAAGGAGAGTGTAGTGG+CGG | + | chr5_3:46683249-46683268 | Msa0814490:intron | 50.0% |
!! | CAAGTAAGGCGCTGTGACAA+GGG | - | chr5_3:46683715-46683734 | None:intergenic | 50.0% |
!! | ACAAGTAAGGCGCTGTGACA+AGG | - | chr5_3:46683716-46683735 | None:intergenic | 50.0% |
TCACAGCGCCTTACTTGTCT+TGG | + | chr5_3:46683718-46683737 | Msa0814490:intron | 50.0% | |
! | CTTGGTGGCAAACTCCCAAA+AGG | + | chr5_3:46683736-46683755 | Msa0814490:CDS | 50.0% |
!! | ATTGTTTTACCGGTGCCAGG+CGG | - | chr5_3:46683778-46683797 | None:intergenic | 50.0% |
! | ATGTTGGTGAGCGCTATTGC+TGG | + | chr5_3:46683796-46683815 | Msa0814490:CDS | 50.0% |
! | TCTCGCCGTCCTTTTACATC+TGG | - | chr5_3:46684156-46684175 | None:intergenic | 50.0% |
CAGTTTACACCTGGGTTCTC+TGG | + | chr5_3:46684413-46684432 | Msa0814490:CDS | 50.0% | |
!! | TGGTGCTGACCTTGCAAACT+TGG | + | chr5_3:46684433-46684452 | Msa0814490:CDS | 50.0% |
ATCATGTGTGCTCACGGCTT+TGG | - | chr5_3:46684495-46684514 | None:intergenic | 50.0% | |
TGATGTTTGCATGGGAGGTC+GGG | + | chr5_3:46684757-46684776 | Msa0814490:CDS | 50.0% | |
AACTTCTCTGGCCAGGCAAA+TGG | + | chr5_3:46684847-46684866 | Msa0814490:CDS | 50.0% | |
GGAGCTTCATCTGCTTGCAA+AGG | + | chr5_3:46685036-46685055 | Msa0814490:CDS | 50.0% | |
!! | TGCTTACCATCCGATTTGGG+CGG | + | chr5_3:46685284-46685303 | Msa0814490:three_prime_UTR | 50.0% |
CTTATTCCGCCCAAATCGGA+TGG | - | chr5_3:46685293-46685312 | None:intergenic | 50.0% | |
!! | CCGATTTGGGCGGAATAAGA+TGG | + | chr5_3:46685294-46685313 | Msa0814490:three_prime_UTR | 50.0% |
! | GTTTGTGGCATCTGAAGCCT+CGG | - | chr5_3:46685473-46685492 | None:intergenic | 50.0% |
AGCTGCAGCTGCATTGTTTG+TGG | - | chr5_3:46685488-46685507 | None:intergenic | 50.0% | |
AGGTTCAGCTTCAGCTGCAT+TGG | - | chr5_3:46685524-46685543 | None:intergenic | 50.0% | |
ACACGACACATGTCCGACAC+CGG | + | chr5_3:46680576-46680595 | Msa0814490:intron | 55.0% | |
!! | GAGGAGTGTCCGTGCTTCAT+AGG | + | chr5_3:46680613-46680632 | Msa0814490:intron | 55.0% |
GGGGCCTTCCTCTTGATATG+TGG | + | chr5_3:46682550-46682569 | Msa0814490:CDS | 55.0% | |
TGGCGGCTGTGACAGAAAAG+TGG | + | chr5_3:46683266-46683285 | Msa0814490:intron | 55.0% | |
CAGCGCCTTACTTGTCTTGG+TGG | + | chr5_3:46683721-46683740 | Msa0814490:intron | 55.0% | |
! | GTTTTGCTTTATGGCCCGCC+TGG | + | chr5_3:46683760-46683779 | Msa0814490:CDS | 55.0% |
!! | TTGTTTTACCGGTGCCAGGC+GGG | - | chr5_3:46683777-46683796 | None:intergenic | 55.0% |
CTAAGGCATGGCCACACTCA+TGG | - | chr5_3:46684604-46684623 | None:intergenic | 55.0% | |
TGGTGCGAATCCTGTTCACC+AGG | + | chr5_3:46684640-46684659 | Msa0814490:CDS | 55.0% | |
! | AGCTTCAGCTGCATTGGTCG+CGG | - | chr5_3:46685518-46685537 | None:intergenic | 55.0% |
CACGACACATGTCCGACACC+GGG | + | chr5_3:46680577-46680596 | Msa0814490:intron | 60.0% | |
GATTAGGCGTGTCCCGGTGT+CGG | - | chr5_3:46680592-46680611 | None:intergenic | 60.0% | |
! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr5_3:46680598-46680617 | None:intergenic | 60.0% |
GCACGGACACTCCTCGGATT+AGG | - | chr5_3:46680608-46680627 | None:intergenic | 60.0% | |
GGTGAGCGCTATTGCTGGAG+AGG | + | chr5_3:46683801-46683820 | Msa0814490:CDS | 60.0% | |
AGCGCTATTGCTGGAGAGGC+TGG | + | chr5_3:46683805-46683824 | Msa0814490:CDS | 60.0% | |
GCGCTATTGCTGGAGAGGCT+GGG | + | chr5_3:46683806-46683825 | Msa0814490:CDS | 60.0% | |
CGCTATTGCTGGAGAGGCTG+GGG | + | chr5_3:46683807-46683826 | Msa0814490:CDS | 60.0% | |
AGGTCAGCACCAGAGAACCC+AGG | - | chr5_3:46684425-46684444 | None:intergenic | 60.0% | |
ACCGTCCTTTGCTGCCCTCA+GGG | - | chr5_3:46684471-46684490 | None:intergenic | 60.0% | |
GTTCCTCATGGGGAGTCTCG+TGG | + | chr5_3:46684671-46684690 | Msa0814490:CDS | 60.0% | |
TCATGGGGAGTCTCGTGGCA+GGG | + | chr5_3:46684676-46684695 | Msa0814490:CDS | 60.0% | |
ACCGGGACACGCCTAATCCG+AGG | + | chr5_3:46680594-46680613 | Msa0814490:intron | 65.0% | |
CTTTATGGCCCGCCTGGCAC+CGG | + | chr5_3:46683766-46683785 | Msa0814490:CDS | 65.0% | |
TGCTGCCCTGAGGGCAGCAA+AGG | + | chr5_3:46684463-46684482 | Msa0814490:CDS | 65.0% | |
GCCCTGAGGGCAGCAAAGGA+CGG | + | chr5_3:46684467-46684486 | Msa0814490:CDS | 65.0% | |
CACCGTCCTTTGCTGCCCTC+AGG | - | chr5_3:46684472-46684491 | None:intergenic | 65.0% | |
CTGCCACGAGACTCCCCATG+AGG | - | chr5_3:46684677-46684696 | None:intergenic | 65.0% | |
CTCATGGGGAGTCTCGTGGC+AGG | + | chr5_3:46684675-46684694 | Msa0814490:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 46679846 | 46685647 | 46679846 | ID=Msa0814490;Name=Msa0814490 |
chr5_3 | mRNA | 46679846 | 46685647 | 46679846 | ID=Msa0814490-mRNA-1;Parent=Msa0814490;Name=Msa0814490-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.66|0.57|1|1|1|7|452|687 |
chr5_3 | exon | 46679846 | 46679911 | 46679846 | ID=Msa0814490-mRNA-1:exon:14134;Parent=Msa0814490-mRNA-1 |
chr5_3 | exon | 46681038 | 46681134 | 46681038 | ID=Msa0814490-mRNA-1:exon:14135;Parent=Msa0814490-mRNA-1 |
chr5_3 | exon | 46681367 | 46681618 | 46681367 | ID=Msa0814490-mRNA-1:exon:14136;Parent=Msa0814490-mRNA-1 |
chr5_3 | exon | 46682368 | 46682610 | 46682368 | ID=Msa0814490-mRNA-1:exon:14137;Parent=Msa0814490-mRNA-1 |
chr5_3 | exon | 46682742 | 46682848 | 46682742 | ID=Msa0814490-mRNA-1:exon:14138;Parent=Msa0814490-mRNA-1 |
chr5_3 | exon | 46683724 | 46684200 | 46683724 | ID=Msa0814490-mRNA-1:exon:14139;Parent=Msa0814490-mRNA-1 |
chr5_3 | exon | 46684374 | 46685647 | 46684374 | ID=Msa0814490-mRNA-1:exon:14140;Parent=Msa0814490-mRNA-1 |
chr5_3 | CDS | 46679846 | 46679911 | 46679846 | ID=Msa0814490-mRNA-1:cds;Parent=Msa0814490-mRNA-1 |
chr5_3 | CDS | 46681038 | 46681134 | 46681038 | ID=Msa0814490-mRNA-1:cds;Parent=Msa0814490-mRNA-1 |
chr5_3 | CDS | 46681367 | 46681618 | 46681367 | ID=Msa0814490-mRNA-1:cds;Parent=Msa0814490-mRNA-1 |
chr5_3 | CDS | 46682368 | 46682610 | 46682368 | ID=Msa0814490-mRNA-1:cds;Parent=Msa0814490-mRNA-1 |
chr5_3 | CDS | 46682742 | 46682848 | 46682742 | ID=Msa0814490-mRNA-1:cds;Parent=Msa0814490-mRNA-1 |
chr5_3 | CDS | 46683724 | 46684200 | 46683724 | ID=Msa0814490-mRNA-1:cds;Parent=Msa0814490-mRNA-1 |
chr5_3 | CDS | 46684374 | 46685195 | 46684374 | ID=Msa0814490-mRNA-1:cds;Parent=Msa0814490-mRNA-1 |
chr5_3 | three_prime_UTR | 46685196 | 46685647 | 46685196 | ID=Msa0814490-mRNA-1:three_prime_utr;Parent=Msa0814490-mRNA-1 |
Gene Sequence |
Protein sequence |