AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0816110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0816110 MtrunA17_Chr5g0448571 84.286 560 65 8 1 556 1 541 0.0 743
Msa0816110 MtrunA17_Chr3g0143731 30.541 370 201 8 187 549 139 459 2.89e-39 152
Msa0816110 MtrunA17_Chr4g0072011 25.368 611 316 18 1 556 1 526 3.01e-38 150
Msa0816110 MtrunA17_Chr3g0124841 39.409 203 109 2 368 556 452 654 2.45e-33 135
Msa0816110 MtrunA17_Chr3g0124841 58.182 55 23 0 1 55 1 55 5.16e-14 75.5
Msa0816110 MtrunA17_Chr3g0130761 25.952 578 356 15 6 556 6 538 4.25e-30 125
Msa0816110 MtrunA17_Chr5g0440551 28.455 369 188 11 245 545 164 524 8.52e-23 102
Msa0816110 MtrunA17_Chr3g0118401 27.835 388 200 11 244 556 169 551 5.94e-22 100
Msa0816110 MtrunA17_Chr3g0118401 42.105 76 40 1 1 72 1 76 3.93e-11 65.9
Msa0816110 MtrunA17_Chr2g0298171 33.981 206 115 5 369 556 528 730 7.29e-22 100
Msa0816110 MtrunA17_Chr5g0405741 32.323 198 123 4 369 556 203 399 1.66e-19 92.4
Msa0816110 MtrunA17_Chr4g0052471 36.170 188 102 4 374 546 8 192 2.37e-18 83.6
Msa0816110 MtrunA17_Chr8g0335341 31.351 185 120 4 374 552 281 464 1.63e-15 80.1
Msa0816110 MtrunA17_Chr1g0211271 32.323 198 114 5 369 546 273 470 2.58e-15 79.3
Msa0816110 MtrunA17_Chr1g0208081 38.947 95 52 1 448 536 3 97 1.64e-14 70.1
Msa0816110 MtrunA17_Chr3g0139411 27.273 176 111 2 383 549 288 455 2.18e-14 76.3
Msa0816110 MtrunA17_Chr2g0331821 29.448 163 114 1 383 544 333 495 5.82e-14 75.1
Msa0816110 MtrunA17_Chr7g0250681 30.256 195 116 4 370 552 405 591 2.94e-13 72.8
Msa0816110 MtrunA17_Chr8g0382551 40.260 77 46 0 1 77 1 77 7.02e-12 67.8
Msa0816110 MtrunA17_Chr8g0382551 24.014 279 159 7 249 487 155 420 1.57e-11 66.6
Msa0816110 MtrunA17_Chr4g0004471 25.806 186 130 2 369 549 122 304 7.11e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0816110 AT4G35240.4 44.288 639 243 18 1 556 1 609 6.81e-114 358
Msa0816110 AT4G35240.3 44.288 639 243 18 1 556 1 609 6.81e-114 358
Msa0816110 AT4G35240.2 44.288 639 243 18 1 556 1 609 9.60e-114 358
Msa0816110 AT4G35240.1 44.288 639 243 18 1 556 1 609 9.60e-114 358
Msa0816110 AT2G17110.1 44.295 596 202 17 1 556 1 506 3.05e-111 348
Msa0816110 AT1G77500.1 43.396 212 86 4 368 556 447 647 1.24e-39 155
Msa0816110 AT1G77500.1 28.933 356 202 9 1 323 1 338 1.04e-17 87.4
Msa0816110 AT1G21740.1 37.918 269 143 5 310 556 429 695 9.48e-37 146
Msa0816110 AT1G20530.1 39.459 185 104 3 374 556 235 413 8.91e-35 139
Msa0816110 AT1G20530.1 40.777 103 54 4 1 98 1 101 4.16e-13 72.4
Msa0816110 AT2G27090.2 32.743 226 112 4 370 556 307 531 1.74e-22 102
Msa0816110 AT2G27090.1 32.743 226 112 4 370 556 307 531 1.74e-22 102
Msa0816110 AT1G02110.1 33.862 189 118 3 370 552 270 457 8.40e-19 90.9
Msa0816110 AT4G30130.4 27.103 428 253 11 160 547 87 495 4.89e-18 87.8
Msa0816110 AT4G30130.2 27.103 428 253 11 160 547 87 495 4.89e-18 87.8
Msa0816110 AT4G39790.1 28.507 221 117 2 377 556 258 478 7.70e-18 87.8
Msa0816110 AT5G54480.1 33.146 178 100 4 375 546 329 493 2.72e-17 85.9
Msa0816110 AT4G30130.3 27.002 437 259 12 161 556 87 504 6.23e-17 84.7
Msa0816110 AT4G30130.1 27.002 437 259 12 161 556 87 504 6.23e-17 84.7
Msa0816110 AT3G60320.1 30.159 189 124 3 370 552 355 541 5.01e-16 82.0
Msa0816110 AT3G51290.2 29.064 203 114 4 369 552 199 390 1.85e-15 80.5
Msa0816110 AT3G51290.3 29.064 203 114 4 369 552 199 390 2.55e-15 79.7
Msa0816110 AT3G51290.1 29.592 196 108 4 369 545 199 383 4.34e-15 79.0
Msa0816110 AT2G19090.1 29.057 265 160 6 303 549 324 578 2.52e-14 76.6
Msa0816110 AT5G25590.1 25.773 194 127 2 371 555 330 515 2.63e-14 76.6
Msa0816110 AT1G52320.3 29.940 167 110 3 383 545 36 199 9.93e-13 70.9
Msa0816110 AT1G52320.4 29.940 167 110 3 383 545 36 199 9.93e-13 70.9

Find 159 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTGGTGTATGGTATTA+TGG 0.113620 5_3:-50025508 Msa0816110:exon
CCTCCTTCTTCTTCCTTCTA+TGG 0.155733 5_3:-50024835 Msa0816110:CDS
GGTGGAGAGGTGGTGGTTAT+TGG 0.228736 5_3:+50025257 None:intergenic
TTTCAGAAGGCTTCTGATTC+CGG 0.264319 5_3:-50024343 Msa0816110:CDS
ATCAATTCTCTCACTTCTAT+TGG 0.271200 5_3:-50025366 Msa0816110:CDS
TCAGGAATAGAGAAAATTTA+AGG 0.277445 5_3:+50023333 None:intergenic
CGCTCCACAAGCTATATCTA+TGG 0.284554 5_3:-50024017 Msa0816110:CDS
AGAGTGGAATAGTTAGAATT+TGG 0.309463 5_3:-50025523 Msa0816110:five_prime_UTR
GGAGGAAGGGATTCCTGATT+TGG 0.314752 5_3:-50024635 Msa0816110:CDS
TAGGGTTTGTATTGTATTGT+AGG 0.320112 5_3:+50025623 None:intergenic
TCATTGGAATGATTAGAATT+AGG 0.326019 5_3:+50024556 None:intergenic
CTGTTGTTATATGGTGGATA+TGG 0.326360 5_3:+50024886 None:intergenic
TACAGTTACTGGGTGGGGTG+GGG 0.327267 5_3:+50025751 None:intergenic
CCGCGTTCCGGCCTGGTAAC+AGG 0.336574 5_3:-50024402 Msa0816110:CDS
GTGGTTGTTGTTGTTGATAA+GGG 0.339995 5_3:+50024920 None:intergenic
ACAGTTACTGGGTGGGGTGG+GGG 0.340458 5_3:+50025752 None:intergenic
CTAGAAAAGTACAGCGTTCC+CGG 0.351054 5_3:+50025439 None:intergenic
CGCGGAATTGGGCTTAACTT+TGG 0.353411 5_3:+50024420 None:intergenic
GGTGGTTGTTGTTGTTGATA+AGG 0.355457 5_3:+50024919 None:intergenic
AGGTGAAGTGGCGGCGGCGG+TGG 0.356306 5_3:+50025302 None:intergenic
TCTCCACCTCACTCCGATTC+CGG 0.357165 5_3:-50025216 Msa0816110:CDS
AGGAGTGTTTGGTGGTGGAG+AGG 0.359125 5_3:+50025244 None:intergenic
AAGTGGTATAGTACAGTTAC+TGG 0.362022 5_3:+50025740 None:intergenic
TAGTTGTTACTGTTGTTATA+TGG 0.364592 5_3:+50024877 None:intergenic
AATTTGGTGTATGGTATTAT+GGG 0.365974 5_3:-50025507 Msa0816110:exon
TCATCCTCGTCTTCCAAATC+AGG 0.371482 5_3:+50024622 None:intergenic
TGGAGAAGGGGAGGAGTGTT+TGG 0.374151 5_3:+50025233 None:intergenic
TTATATGGTGGATATGGATA+TGG 0.377833 5_3:+50024892 None:intergenic
AGTACAGTTACTGGGTGGGG+TGG 0.381779 5_3:+50025749 None:intergenic
GGTTTAACTCGAACTGTGAT+TGG 0.398300 5_3:-50023511 Msa0816110:CDS
TTTGGAGGAGAAGGTGGAGC+TGG 0.400421 5_3:+50024772 None:intergenic
ATTCACCGACATAGACAGTT+TGG 0.405335 5_3:+50024968 None:intergenic
GGTGGTCGTCATGGTGAAAT+TGG 0.409195 5_3:+50025151 None:intergenic
GAAACTCTATCAGGAAGTTA+AGG 0.411276 5_3:-50023989 Msa0816110:intron
CGAGGATGAAGTTGTTAAAC+AGG 0.418339 5_3:-50024608 Msa0816110:CDS
GTTTGGTGGTGGAGAGGTGG+TGG 0.419515 5_3:+50025250 None:intergenic
AGGTGGTGAAGATCCATAGA+AGG 0.419627 5_3:+50024822 None:intergenic
ACCATGATCATGATGATCAT+TGG 0.421527 5_3:+50024540 None:intergenic
CCAGGCCGGAACGCGGAATT+GGG 0.422096 5_3:+50024409 None:intergenic
AGGAGGTGAAGTGGCGGCGG+CGG 0.424057 5_3:+50025299 None:intergenic
AGGGGAGGAGTGTTTGGTGG+TGG 0.428724 5_3:+50025239 None:intergenic
GCAGCTGAAGGGATTGATCC+AGG 0.429630 5_3:-50023398 Msa0816110:CDS
TACTTCCAAGATGTTGCATC+TGG 0.432326 5_3:-50024154 Msa0816110:CDS
ATGGGAGAAGAAACTCTATC+AGG 0.432590 5_3:-50023998 Msa0816110:CDS
GTACAGTTACTGGGTGGGGT+GGG 0.433005 5_3:+50025750 None:intergenic
AAGGATGTGAGGGAGGAGGA+AGG 0.435704 5_3:-50024649 Msa0816110:CDS
ATCGAAGCTTTCCAACTTCG+AGG 0.437391 5_3:+50024302 None:intergenic
AACAACAGTAACAACTATTA+CGG 0.447302 5_3:-50024871 Msa0816110:CDS
TTAAGCCCAATTCCGCGTTC+CGG 0.448565 5_3:-50024414 Msa0816110:CDS
GAAATCAAGATGACCGGAAT+CGG 0.450471 5_3:+50025203 None:intergenic
GGAACTAGTACAAACAAGAT+TGG 0.452957 5_3:+50023354 None:intergenic
GAATCGGAGTGAGGTGGAGA+AGG 0.457062 5_3:+50025219 None:intergenic
TAGACAGTTTGGTTAGTCAT+AGG 0.458109 5_3:+50024979 None:intergenic
GGCTTTGAAGAAGGAGCTAT+AGG 0.460005 5_3:+50024799 None:intergenic
CTATGACGATAAATAAGATA+AGG 0.466081 5_3:-50023438 Msa0816110:CDS
AGGATGTGAGGGAGGAGGAA+GGG 0.468720 5_3:-50024648 Msa0816110:CDS
GGGTTGTACCAGCTCGAAGC+TGG 0.470135 5_3:-50025487 Msa0816110:CDS
AGATAATAATAATGAATGAA+TGG 0.475766 5_3:+50025577 None:intergenic
AGTGTTTGGTGGTGGAGAGG+TGG 0.475970 5_3:+50025247 None:intergenic
AGCAACCAGATGCAACATCT+TGG 0.476022 5_3:+50024149 None:intergenic
AATAGTTAGAATTTGGTGTA+TGG 0.476447 5_3:-50025516 Msa0816110:five_prime_UTR
AGAAGGGGAGGAGTGTTTGG+TGG 0.479441 5_3:+50025236 None:intergenic
GGATATGGATATGGTGGTGG+TGG 0.481629 5_3:+50024901 None:intergenic
TATGACGATAAATAAGATAA+GGG 0.482363 5_3:-50023437 Msa0816110:CDS
CCCTCACATCCTTTGAATCC+CGG 0.483045 5_3:+50024659 None:intergenic
AAATGCGGGTCATTCATGAT+AGG 0.488298 5_3:-50023588 Msa0816110:CDS
GGAGGAGAAGGTGGAGCTGG+AGG 0.488892 5_3:+50024775 None:intergenic
TCCAATGATCATCATGATCA+TGG 0.495308 5_3:-50024541 Msa0816110:CDS
TCCCGGCGGTAGCTTTATGC+CGG 0.496403 5_3:-50025458 Msa0816110:CDS
TTCAAAGGATGTGAGGGAGG+AGG 0.497182 5_3:-50024653 Msa0816110:CDS
AAGAAAAGATGATATGATAG+TGG 0.497827 5_3:+50025717 None:intergenic
TATAGTACAGTTACTGGGTG+GGG 0.498934 5_3:+50025746 None:intergenic
TCAAGAGGGTTCCTGTTACC+AGG 0.499342 5_3:+50024391 None:intergenic
ATCGCGCATATCCTCGAAGT+TGG 0.501767 5_3:-50024313 Msa0816110:CDS
GGAGAAGGTGGAGCTGGAGG+TGG 0.502429 5_3:+50024778 None:intergenic
GGAGTGAGGTGGAGAAGGGG+AGG 0.502832 5_3:+50025224 None:intergenic
AATAATAATGAATGAATGGA+TGG 0.503646 5_3:+50025581 None:intergenic
AGGAGGAGGTGAAGTGGCGG+CGG 0.505637 5_3:+50025296 None:intergenic
AGATGATATGATAGTGGAAG+TGG 0.508007 5_3:+50025723 None:intergenic
ACGATTGAAGAAGGTGGAGG+TGG 0.509774 5_3:+50025015 None:intergenic
TCCACGCTATTAGCATCAAC+GGG 0.514795 5_3:+50024084 None:intergenic
TTGGAATGATTAGAATTAGG+TGG 0.520407 5_3:+50024559 None:intergenic
ATCCACGCTATTAGCATCAA+CGG 0.521538 5_3:+50024083 None:intergenic
GCTGGAGGTGGCTTTGAAGA+AGG 0.527528 5_3:+50024790 None:intergenic
CACCCACGGCTACACCTAGC+CGG 0.529747 5_3:-50024678 Msa0816110:CDS
AATCGGAGTGAGGTGGAGAA+GGG 0.529770 5_3:+50025220 None:intergenic
TATGGTGGATATGGATATGG+TGG 0.530798 5_3:+50024895 None:intergenic
TACACCTAGCCGGGATTCAA+AGG 0.532387 5_3:-50024668 Msa0816110:CDS
GAAGACACCACAGACGATGA+AGG 0.540141 5_3:+50024126 None:intergenic
TGGAATGATTAGAATTAGGT+GGG 0.541054 5_3:+50024560 None:intergenic
GATATGCGCGATATGTGAAC+CGG 0.543403 5_3:+50024324 None:intergenic
TTGTTACTGTTGTTATATGG+TGG 0.544186 5_3:+50024880 None:intergenic
ATTTCTCTGGCAACCTCAAG+AGG 0.544709 5_3:+50024376 None:intergenic
TAGTAGTGGTGTTGTTTGTG+AGG 0.544930 5_3:+50025090 None:intergenic
AGAGTGGAAATCAAGATGAC+CGG 0.546789 5_3:+50025197 None:intergenic
CCCGGCGGTAGCTTTATGCC+GGG 0.546913 5_3:-50025457 Msa0816110:CDS
TTGTTAAGTTAACATACCCC+TGG 0.549220 5_3:+50023380 None:intergenic
ACCCACGGCTACACCTAGCC+GGG 0.551409 5_3:-50024677 Msa0816110:CDS
AGAACTGTGGCCGCAGCTGA+AGG 0.553134 5_3:-50023410 Msa0816110:CDS
TCTCCCATAGATATAGCTTG+TGG 0.553280 5_3:+50024013 None:intergenic
CTAAAGCGTTTAGAAGAAAG+AGG 0.555612 5_3:-50023553 Msa0816110:CDS
AGAGCTAAGATTGCGCGACC+TGG 0.559269 5_3:+50024041 None:intergenic
GATCATCGAGGTGGTCGTCA+TGG 0.559785 5_3:+50025142 None:intergenic
AGAAATGTAAAAGAGAGAAA+CGG 0.559880 5_3:-50025848 Msa0816110:five_prime_UTR
TAGTGGTGTTGTTTGTGAGG+AGG 0.564119 5_3:+50025093 None:intergenic
GAACTGTGGCCGCAGCTGAA+GGG 0.564185 5_3:-50023409 Msa0816110:CDS
GTTGTGAATCATTGTAGTAG+TGG 0.569070 5_3:+50025076 None:intergenic
GGTGGATATGGATATGGTGG+TGG 0.570106 5_3:+50024898 None:intergenic
AGGAGGAGGAGGTGAAGTGG+CGG 0.572022 5_3:+50025293 None:intergenic
ATCGGAGTGAGGTGGAGAAG+GGG 0.572193 5_3:+50025221 None:intergenic
TTGGTGTTCATCGTCGTCGT+CGG 0.574273 5_3:+50025170 None:intergenic
GAAGAAGGAGCTATAGGAGG+TGG 0.576757 5_3:+50024805 None:intergenic
CAGCTGAAGGGATTGATCCA+GGG 0.577103 5_3:-50023397 Msa0816110:CDS
TTCATGTGAAATTGATGATG+TGG 0.577639 5_3:+50025054 None:intergenic
TGTTCGTAAACGATTGAAGA+AGG 0.583851 5_3:+50025006 None:intergenic
GAGGGTTCCTGTTACCAGGC+CGG 0.584922 5_3:+50024395 None:intergenic
ACATCCTTTGAATCCCGGCT+AGG 0.586247 5_3:+50024664 None:intergenic
GTATAGTACAGTTACTGGGT+GGG 0.590351 5_3:+50025745 None:intergenic
CCCGGCATAAAGCTACCGCC+GGG 0.591317 5_3:+50025457 None:intergenic
GCTCCACAAGCTATATCTAT+GGG 0.591800 5_3:-50024016 Msa0816110:CDS
GAGATCGTCCAGCTTCGAGC+TGG 0.592498 5_3:+50025479 None:intergenic
TAGAAGGAAGAAGAAGGAGG+AGG 0.593435 5_3:+50024838 None:intergenic
GATCCATAGAAGGAAGAAGA+AGG 0.593503 5_3:+50024832 None:intergenic
GGTTGCTCCTTCATCGTCTG+TGG 0.593780 5_3:-50024133 Msa0816110:CDS
TCATGATCATGGTCATCTTG+AGG 0.598531 5_3:-50024530 Msa0816110:CDS
GAGAGAATCTTATGCCAGCA+TGG 0.599370 5_3:+50025815 None:intergenic
CCGGGATTCAAAGGATGTGA+GGG 0.599644 5_3:-50024659 Msa0816110:CDS
TGGTAACAGGAACCCTCTTG+AGG 0.600072 5_3:-50024389 Msa0816110:CDS
TTGACGTTGAACTCACTACC+AGG 0.600783 5_3:-50024059 Msa0816110:CDS
AGCTGAAGGGATTGATCCAG+GGG 0.603427 5_3:-50023396 Msa0816110:CDS
ATAAGGGTTGTAATAAGATG+AGG 0.604928 5_3:+50024936 None:intergenic
TGACCGGAATCGGAGTGAGG+TGG 0.606027 5_3:+50025213 None:intergenic
ACGGACGAAAATATCCATGC+TGG 0.610331 5_3:-50025829 Msa0816110:five_prime_UTR
ACCCGTTGATGCTAATAGCG+TGG 0.611422 5_3:-50024085 Msa0816110:CDS
GCCGGGATTCAAAGGATGTG+AGG 0.611615 5_3:-50024660 Msa0816110:CDS
GAAGTTGTTAAACAGGTACA+TGG 0.613510 5_3:-50024601 Msa0816110:CDS
TTTCTCTGGCAACCTCAAGA+GGG 0.614671 5_3:+50024377 None:intergenic
TAAACGATTGAAGAAGGTGG+AGG 0.625943 5_3:+50025012 None:intergenic
CCTGTTACCAGGCCGGAACG+CGG 0.630205 5_3:+50024402 None:intergenic
ACTAACCAAACTGTCTATGT+CGG 0.632543 5_3:-50024973 Msa0816110:CDS
GGATTCAAAGGATGTGAGGG+AGG 0.634896 5_3:-50024656 Msa0816110:CDS
GGTGTGTATTGCGTCATCTG+TGG 0.637398 5_3:+50024697 None:intergenic
TGGATCAATCCCTTCAGCTG+CGG 0.644952 5_3:+50023400 None:intergenic
GATTCCTGATTTGGAAGACG+AGG 0.647664 5_3:-50024626 Msa0816110:CDS
CCATAGAAGGAAGAAGAAGG+AGG 0.654244 5_3:+50024835 None:intergenic
TTTGAAGAAGGAGCTATAGG+AGG 0.654960 5_3:+50024802 None:intergenic
TCGTAAACGATTGAAGAAGG+TGG 0.657233 5_3:+50025009 None:intergenic
CGTCGTCGTCGGAATCAGAG+TGG 0.660708 5_3:+50025181 None:intergenic
AGATGACCGGAATCGGAGTG+AGG 0.664008 5_3:+50025210 None:intergenic
AGTGGTATAGTACAGTTACT+GGG 0.670694 5_3:+50025741 None:intergenic
AAGCTTCGATATCATCACAA+AGG 0.672556 5_3:-50024289 Msa0816110:intron
GGTATAGTACAGTTACTGGG+TGG 0.678282 5_3:+50025744 None:intergenic
GATGACGCAATACACACCCA+CGG 0.696512 5_3:-50024692 Msa0816110:CDS
TATTGTAGGTAATTGAACAG+TGG 0.697301 5_3:+50025637 None:intergenic
TGTAGGTAATTGAACAGTGG+TGG 0.714125 5_3:+50025640 None:intergenic
CATCATCATGATCATCGAGG+TGG 0.717560 5_3:+50025133 None:intergenic
AGATAAGGGATGAAGAACTG+TGG 0.720407 5_3:-50023423 Msa0816110:CDS
CATCATCATCATGATCATCG+AGG 0.725499 5_3:+50025130 None:intergenic
GAAGCTGGACGATCTCCCGG+CGG 0.755374 5_3:-50025472 Msa0816110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTGAACTTTTTAATTTA+GGG + chr5_3:50023592-50023611 None:intergenic 10.0%
!!! ATTATTGAACTTTTTAATTT+AGG + chr5_3:50023593-50023612 None:intergenic 10.0%
!! AGATAATAATAATGAATGAA+TGG + chr5_3:50023620-50023639 None:intergenic 15.0%
!!! CTTTTTCAATGTTTATTTAT+TGG - chr5_3:50025567-50025586 Msa0816110:five_prime_UTR 15.0%
!! AATAATAATGAATGAATGGA+TGG + chr5_3:50023616-50023635 None:intergenic 20.0%
!!! CTCTTTTAGAATAAAATGAT+TGG + chr5_3:50025302-50025321 None:intergenic 20.0%
!! ATTTATGAGTTTCTATAACA+AGG - chr5_3:50025544-50025563 Msa0816110:five_prime_UTR 20.0%
!! TATGACGATAAATAAGATAA+GGG - chr5_3:50025757-50025776 Msa0816110:five_prime_UTR 20.0%
! AGAAATGTAAAAGAGAGAAA+CGG - chr5_3:50023346-50023365 Msa0816110:CDS 25.0%
! AAGAAAAGATGATATGATAG+TGG + chr5_3:50023480-50023499 None:intergenic 25.0%
!!! CTAACTACTTTTTTTTTTGC+TGG + chr5_3:50023649-50023668 None:intergenic 25.0%
! AAAAAAGTAGTTAGATAGAG+TGG - chr5_3:50023655-50023674 Msa0816110:intron 25.0%
!!! AATAGTTAGAATTTGGTGTA+TGG - chr5_3:50023678-50023697 Msa0816110:intron 25.0%
!!! AATTTGGTGTATGGTATTAT+GGG - chr5_3:50023687-50023706 Msa0816110:intron 25.0%
!!! TTATTGGTATTAGTTTTAGG+AGG + chr5_3:50023924-50023943 None:intergenic 25.0%
!!! TGGTTATTGGTATTAGTTTT+AGG + chr5_3:50023927-50023946 None:intergenic 25.0%
! TAGTTGTTACTGTTGTTATA+TGG + chr5_3:50024320-50024339 None:intergenic 25.0%
! AACAACAGTAACAACTATTA+CGG - chr5_3:50024323-50024342 Msa0816110:CDS 25.0%
! TCATTGGAATGATTAGAATT+AGG + chr5_3:50024641-50024660 None:intergenic 25.0%
! AAAAAGAATCTGAATTTCTC+TGG + chr5_3:50024834-50024853 None:intergenic 25.0%
!!! AATTCAGATTCTTTTTCAGA+AGG - chr5_3:50024838-50024857 Msa0816110:CDS 25.0%
! GGAATGAGAAATATAATGTA+GGG + chr5_3:50024965-50024984 None:intergenic 25.0%
! AGGAATGAGAAATATAATGT+AGG + chr5_3:50024966-50024985 None:intergenic 25.0%
! AAACAAAACCAAAATCGAAT+CGG + chr5_3:50025270-50025289 None:intergenic 25.0%
! ACTTAACTTAATAGTGTGAT+TGG + chr5_3:50025377-50025396 None:intergenic 25.0%
! ATAAATAAAAAACCTCAGGA+AGG + chr5_3:50025446-50025465 None:intergenic 25.0%
!! AATGTTTATTTATTGGCTAC+AGG - chr5_3:50025574-50025593 Msa0816110:five_prime_UTR 25.0%
! CTATGACGATAAATAAGATA+AGG - chr5_3:50025756-50025775 Msa0816110:five_prime_UTR 25.0%
! TCAGGAATAGAGAAAATTTA+AGG + chr5_3:50025864-50025883 None:intergenic 25.0%
TATTGTAGGTAATTGAACAG+TGG + chr5_3:50023560-50023579 None:intergenic 30.0%
TAGGGTTTGTATTGTATTGT+AGG + chr5_3:50023574-50023593 None:intergenic 30.0%
!!! CTACTTTTTTTTTTGCTGGA+TGG + chr5_3:50023645-50023664 None:intergenic 30.0%
AGAGTGGAATAGTTAGAATT+TGG - chr5_3:50023671-50023690 Msa0816110:intron 30.0%
!! GAATTTGGTGTATGGTATTA+TGG - chr5_3:50023686-50023705 Msa0816110:intron 30.0%
ATCAATTCTCTCACTTCTAT+TGG - chr5_3:50023828-50023847 Msa0816110:intron 30.0%
!! TTCATGTGAAATTGATGATG+TGG + chr5_3:50024143-50024162 None:intergenic 30.0%
ATAAGGGTTGTAATAAGATG+AGG + chr5_3:50024261-50024280 None:intergenic 30.0%
!! TTATATGGTGGATATGGATA+TGG + chr5_3:50024305-50024324 None:intergenic 30.0%
TTGTTACTGTTGTTATATGG+TGG + chr5_3:50024317-50024336 None:intergenic 30.0%
! AAATCCCAAGTAGAAGTTTT+TGG + chr5_3:50024443-50024462 None:intergenic 30.0%
TGGAATGATTAGAATTAGGT+GGG + chr5_3:50024637-50024656 None:intergenic 30.0%
TTGGAATGATTAGAATTAGG+TGG + chr5_3:50024638-50024657 None:intergenic 30.0%
! TACACTAAGAGACAGATTTT+TGG - chr5_3:50025328-50025347 Msa0816110:CDS 30.0%
GCAGATAAATAAAAAACCTC+AGG + chr5_3:50025450-50025469 None:intergenic 30.0%
! TAGTTTAGAACACACAAGAA+CGG + chr5_3:50025492-50025511 None:intergenic 30.0%
TCTCTCCACAAAAATAAGTA+TGG - chr5_3:50025709-50025728 Msa0816110:five_prime_UTR 30.0%
!!! GATTGCCATACTTATTTTTG+TGG + chr5_3:50025717-50025736 None:intergenic 30.0%
AGTGGTATAGTACAGTTACT+GGG + chr5_3:50023456-50023475 None:intergenic 35.0%
AAGTGGTATAGTACAGTTAC+TGG + chr5_3:50023457-50023476 None:intergenic 35.0%
!! AGATGATATGATAGTGGAAG+TGG + chr5_3:50023474-50023493 None:intergenic 35.0%
!!! TTGGTATTAGTTTTAGGAGG+AGG + chr5_3:50023921-50023940 None:intergenic 35.0%
GTTGTGAATCATTGTAGTAG+TGG + chr5_3:50024121-50024140 None:intergenic 35.0%
TGTTCGTAAACGATTGAAGA+AGG + chr5_3:50024191-50024210 None:intergenic 35.0%
! TAGACAGTTTGGTTAGTCAT+AGG + chr5_3:50024218-50024237 None:intergenic 35.0%
ACTAACCAAACTGTCTATGT+CGG - chr5_3:50024221-50024240 Msa0816110:intron 35.0%
! GTGGTTGTTGTTGTTGATAA+GGG + chr5_3:50024277-50024296 None:intergenic 35.0%
!! CTGTTGTTATATGGTGGATA+TGG + chr5_3:50024311-50024330 None:intergenic 35.0%
TCCTCCAAAAACTTCTACTT+GGG - chr5_3:50024436-50024455 Msa0816110:CDS 35.0%
GAAGTTGTTAAACAGGTACA+TGG - chr5_3:50024593-50024612 Msa0816110:CDS 35.0%
TCCAATGATCATCATGATCA+TGG - chr5_3:50024653-50024672 Msa0816110:CDS 35.0%
ACCATGATCATGATGATCAT+TGG + chr5_3:50024657-50024676 None:intergenic 35.0%
AAGCTTCGATATCATCACAA+AGG - chr5_3:50024905-50024924 Msa0816110:CDS 35.0%
TCAAGTCAATTCATCATGTC+AGG + chr5_3:50024986-50025005 None:intergenic 35.0%
GAAACTCTATCAGGAAGTTA+AGG - chr5_3:50025205-50025224 Msa0816110:CDS 35.0%
TGGTGATCTAATTTAGTGAC+AGG + chr5_3:50025245-50025264 None:intergenic 35.0%
AAACCAAAATCGAATCGGAT+TGG + chr5_3:50025265-50025284 None:intergenic 35.0%
! CTAAAGCGTTTAGAAGAAAG+AGG - chr5_3:50025641-50025660 Msa0816110:five_prime_UTR 35.0%
!!! GGTGCTGATTTTGATAAAGT+TGG - chr5_3:50025662-50025681 Msa0816110:five_prime_UTR 35.0%
TTGTTAAGTTAACATACCCC+TGG + chr5_3:50025817-50025836 None:intergenic 35.0%
GGAACTAGTACAAACAAGAT+TGG + chr5_3:50025843-50025862 None:intergenic 35.0%
TATAGTACAGTTACTGGGTG+GGG + chr5_3:50023451-50023470 None:intergenic 40.0%
GTATAGTACAGTTACTGGGT+GGG + chr5_3:50023452-50023471 None:intergenic 40.0%
TGTAGGTAATTGAACAGTGG+TGG + chr5_3:50023557-50023576 None:intergenic 40.0%
!!! GTATTAGTTTTAGGAGGAGG+AGG + chr5_3:50023918-50023937 None:intergenic 40.0%
GAAATCAAGATGACCGGAAT+CGG + chr5_3:50023994-50024013 None:intergenic 40.0%
AGAGTGGAAATCAAGATGAC+CGG + chr5_3:50024000-50024019 None:intergenic 40.0%
CATCATCATCATGATCATCG+AGG + chr5_3:50024067-50024086 None:intergenic 40.0%
!! TAGTAGTGGTGTTGTTTGTG+AGG + chr5_3:50024107-50024126 None:intergenic 40.0%
TAAACGATTGAAGAAGGTGG+AGG + chr5_3:50024185-50024204 None:intergenic 40.0%
TCGTAAACGATTGAAGAAGG+TGG + chr5_3:50024188-50024207 None:intergenic 40.0%
ATTCACCGACATAGACAGTT+TGG + chr5_3:50024229-50024248 None:intergenic 40.0%
! GGTGGTTGTTGTTGTTGATA+AGG + chr5_3:50024278-50024297 None:intergenic 40.0%
!! TATGGTGGATATGGATATGG+TGG + chr5_3:50024302-50024321 None:intergenic 40.0%
GATCCATAGAAGGAAGAAGA+AGG + chr5_3:50024365-50024384 None:intergenic 40.0%
TTTGAAGAAGGAGCTATAGG+AGG + chr5_3:50024395-50024414 None:intergenic 40.0%
!! GTAGAAGTTTTTGGAGGAGA+AGG + chr5_3:50024434-50024453 None:intergenic 40.0%
CTCCTCCAAAAACTTCTACT+TGG - chr5_3:50024435-50024454 Msa0816110:CDS 40.0%
!! TCCCAAGTAGAAGTTTTTGG+AGG + chr5_3:50024440-50024459 None:intergenic 40.0%
!! CGTCGTTTTCGAAGAAATTG+AGG + chr5_3:50024466-50024485 None:intergenic 40.0%
CGAGGATGAAGTTGTTAAAC+AGG - chr5_3:50024586-50024605 Msa0816110:CDS 40.0%
TCATGATCATGGTCATCTTG+AGG - chr5_3:50024664-50024683 Msa0816110:CDS 40.0%
TTTCAGAAGGCTTCTGATTC+CGG - chr5_3:50024851-50024870 Msa0816110:CDS 40.0%
TACTTCCAAGATGTTGCATC+TGG - chr5_3:50025040-50025059 Msa0816110:CDS 40.0%
ATCCACGCTATTAGCATCAA+CGG + chr5_3:50025114-50025133 None:intergenic 40.0%
GCTCCACAAGCTATATCTAT+GGG - chr5_3:50025178-50025197 Msa0816110:CDS 40.0%
TCTCCCATAGATATAGCTTG+TGG + chr5_3:50025184-50025203 None:intergenic 40.0%
ATGGGAGAAGAAACTCTATC+AGG - chr5_3:50025196-50025215 Msa0816110:CDS 40.0%
!! TCACCAATCCGATTCGATTT+TGG - chr5_3:50025259-50025278 Msa0816110:CDS 40.0%
AGTAGGAGGAACATTTCAGA+CGG + chr5_3:50025409-50025428 None:intergenic 40.0%
TAAAAAACCTCAGGAAGGAC+AGG + chr5_3:50025441-50025460 None:intergenic 40.0%
! TATTTATTGGCTACAGGCAG+AGG - chr5_3:50025580-50025599 Msa0816110:five_prime_UTR 40.0%
TACAGGCAGAGGAAAAAATG+CGG - chr5_3:50025591-50025610 Msa0816110:five_prime_UTR 40.0%
AAATGCGGGTCATTCATGAT+AGG - chr5_3:50025606-50025625 Msa0816110:five_prime_UTR 40.0%
GGTTTAACTCGAACTGTGAT+TGG - chr5_3:50025683-50025702 Msa0816110:five_prime_UTR 40.0%
AGATAAGGGATGAAGAACTG+TGG - chr5_3:50025771-50025790 Msa0816110:five_prime_UTR 40.0%
ACGGACGAAAATATCCATGC+TGG - chr5_3:50023365-50023384 Msa0816110:CDS 45.0%
GAGAGAATCTTATGCCAGCA+TGG + chr5_3:50023382-50023401 None:intergenic 45.0%
GGTATAGTACAGTTACTGGG+TGG + chr5_3:50023453-50023472 None:intergenic 45.0%
! CTAGAAAAGTACAGCGTTCC+CGG + chr5_3:50023758-50023777 None:intergenic 45.0%
!!! TTAGTTTTAGGAGGAGGAGG+AGG + chr5_3:50023915-50023934 None:intergenic 45.0%
CATCATCATGATCATCGAGG+TGG + chr5_3:50024064-50024083 None:intergenic 45.0%
!! TAGTGGTGTTGTTTGTGAGG+AGG + chr5_3:50024104-50024123 None:intergenic 45.0%
TAGAAGGAAGAAGAAGGAGG+AGG + chr5_3:50024359-50024378 None:intergenic 45.0%
CCATAGAAGGAAGAAGAAGG+AGG + chr5_3:50024362-50024381 None:intergenic 45.0%
CCTCCTTCTTCTTCCTTCTA+TGG - chr5_3:50024359-50024378 Msa0816110:CDS 45.0%
AGGTGGTGAAGATCCATAGA+AGG + chr5_3:50024375-50024394 None:intergenic 45.0%
!! GGCTTTGAAGAAGGAGCTAT+AGG + chr5_3:50024398-50024417 None:intergenic 45.0%
!! GAAGTTTTTGGAGGAGAAGG+TGG + chr5_3:50024431-50024450 None:intergenic 45.0%
!! GATTCCTGATTTGGAAGACG+AGG - chr5_3:50024568-50024587 Msa0816110:CDS 45.0%
TCATCCTCGTCTTCCAAATC+AGG + chr5_3:50024575-50024594 None:intergenic 45.0%
TTTCTCTGGCAACCTCAAGA+GGG + chr5_3:50024820-50024839 None:intergenic 45.0%
ATTTCTCTGGCAACCTCAAG+AGG + chr5_3:50024821-50024840 None:intergenic 45.0%
GATATGCGCGATATGTGAAC+CGG + chr5_3:50024873-50024892 None:intergenic 45.0%
ATCGAAGCTTTCCAACTTCG+AGG + chr5_3:50024895-50024914 None:intergenic 45.0%
TGCAACATCTTGGAAGTAGC+TGG + chr5_3:50025038-50025057 None:intergenic 45.0%
AGCAACCAGATGCAACATCT+TGG + chr5_3:50025048-50025067 None:intergenic 45.0%
TCCACGCTATTAGCATCAAC+GGG + chr5_3:50025113-50025132 None:intergenic 45.0%
TTGACGTTGAACTCACTACC+AGG - chr5_3:50025135-50025154 Msa0816110:CDS 45.0%
CGCTCCACAAGCTATATCTA+TGG - chr5_3:50025177-50025196 Msa0816110:CDS 45.0%
ACAGGATAGCTAACAGTAGG+AGG + chr5_3:50025423-50025442 None:intergenic 45.0%
AGGACAGGATAGCTAACAGT+AGG + chr5_3:50025426-50025445 None:intergenic 45.0%
! TGATTCGCATCGACAGAGAA+CGG + chr5_3:50025518-50025537 None:intergenic 45.0%
ACAGGCAGAGGAAAAAATGC+GGG - chr5_3:50025592-50025611 Msa0816110:five_prime_UTR 45.0%
AATCGGAGTGAGGTGGAGAA+GGG + chr5_3:50023977-50023996 None:intergenic 50.0%
! TTGGTGTTCATCGTCGTCGT+CGG + chr5_3:50024027-50024046 None:intergenic 50.0%
GGTGGTCGTCATGGTGAAAT+TGG + chr5_3:50024046-50024065 None:intergenic 50.0%
ACGATTGAAGAAGGTGGAGG+TGG + chr5_3:50024182-50024201 None:intergenic 50.0%
!! GGATATGGATATGGTGGTGG+TGG + chr5_3:50024296-50024315 None:intergenic 50.0%
GGTGGATATGGATATGGTGG+TGG + chr5_3:50024299-50024318 None:intergenic 50.0%
GAAGAAGGAGCTATAGGAGG+TGG + chr5_3:50024392-50024411 None:intergenic 50.0%
GGTGTGTATTGCGTCATCTG+TGG + chr5_3:50024500-50024519 None:intergenic 50.0%
GATGACGCAATACACACCCA+CGG - chr5_3:50024502-50024521 Msa0816110:CDS 50.0%
TACACCTAGCCGGGATTCAA+AGG - chr5_3:50024526-50024545 Msa0816110:CDS 50.0%
ACATCCTTTGAATCCCGGCT+AGG + chr5_3:50024533-50024552 None:intergenic 50.0%
CCCTCACATCCTTTGAATCC+CGG + chr5_3:50024538-50024557 None:intergenic 50.0%
CCGGGATTCAAAGGATGTGA+GGG - chr5_3:50024535-50024554 Msa0816110:CDS 50.0%
GGATTCAAAGGATGTGAGGG+AGG - chr5_3:50024538-50024557 Msa0816110:CDS 50.0%
TTCAAAGGATGTGAGGGAGG+AGG - chr5_3:50024541-50024560 Msa0816110:CDS 50.0%
GGAGGAAGGGATTCCTGATT+TGG - chr5_3:50024559-50024578 Msa0816110:CDS 50.0%
CGCGGAATTGGGCTTAACTT+TGG + chr5_3:50024777-50024796 None:intergenic 50.0%
TTAAGCCCAATTCCGCGTTC+CGG - chr5_3:50024780-50024799 Msa0816110:CDS 50.0%
TCAAGAGGGTTCCTGTTACC+AGG + chr5_3:50024806-50024825 None:intergenic 50.0%
TGGTAACAGGAACCCTCTTG+AGG - chr5_3:50024805-50024824 Msa0816110:CDS 50.0%
ATCGCGCATATCCTCGAAGT+TGG - chr5_3:50024881-50024900 Msa0816110:CDS 50.0%
GAAGACACCACAGACGATGA+AGG + chr5_3:50025071-50025090 None:intergenic 50.0%
ACCCGTTGATGCTAATAGCG+TGG - chr5_3:50025109-50025128 Msa0816110:CDS 50.0%
TAGCTATCCTGTCCTTCCTG+AGG - chr5_3:50025431-50025450 Msa0816110:CDS 50.0%
TGGATCAATCCCTTCAGCTG+CGG + chr5_3:50025797-50025816 None:intergenic 50.0%
CAGCTGAAGGGATTGATCCA+GGG - chr5_3:50025797-50025816 Msa0816110:five_prime_UTR 50.0%
AGCTGAAGGGATTGATCCAG+GGG - chr5_3:50025798-50025817 Msa0816110:five_prime_UTR 50.0%
TACAGTTACTGGGTGGGGTG+GGG + chr5_3:50023446-50023465 None:intergenic 55.0%
GTACAGTTACTGGGTGGGGT+GGG + chr5_3:50023447-50023466 None:intergenic 55.0%
AGTACAGTTACTGGGTGGGG+TGG + chr5_3:50023448-50023467 None:intergenic 55.0%
! GGTGGAGAGGTGGTGGTTAT+TGG + chr5_3:50023940-50023959 None:intergenic 55.0%
!! AGTGTTTGGTGGTGGAGAGG+TGG + chr5_3:50023950-50023969 None:intergenic 55.0%
!! AGGAGTGTTTGGTGGTGGAG+AGG + chr5_3:50023953-50023972 None:intergenic 55.0%
!! AGAAGGGGAGGAGTGTTTGG+TGG + chr5_3:50023961-50023980 None:intergenic 55.0%
!! TGGAGAAGGGGAGGAGTGTT+TGG + chr5_3:50023964-50023983 None:intergenic 55.0%
ATCGGAGTGAGGTGGAGAAG+GGG + chr5_3:50023976-50023995 None:intergenic 55.0%
GAATCGGAGTGAGGTGGAGA+AGG + chr5_3:50023978-50023997 None:intergenic 55.0%
TCTCCACCTCACTCCGATTC+CGG - chr5_3:50023978-50023997 Msa0816110:intron 55.0%
AGATGACCGGAATCGGAGTG+AGG + chr5_3:50023987-50024006 None:intergenic 55.0%
GATCATCGAGGTGGTCGTCA+TGG + chr5_3:50024055-50024074 None:intergenic 55.0%
!! GCTGGAGGTGGCTTTGAAGA+AGG + chr5_3:50024407-50024426 None:intergenic 55.0%
TTTGGAGGAGAAGGTGGAGC+TGG + chr5_3:50024425-50024444 None:intergenic 55.0%
GCCGGGATTCAAAGGATGTG+AGG - chr5_3:50024534-50024553 Msa0816110:CDS 55.0%
AAGGATGTGAGGGAGGAGGA+AGG - chr5_3:50024545-50024564 Msa0816110:CDS 55.0%
AGGATGTGAGGGAGGAGGAA+GGG - chr5_3:50024546-50024565 Msa0816110:CDS 55.0%
GGTTGCTCCTTCATCGTCTG+TGG - chr5_3:50025061-50025080 Msa0816110:CDS 55.0%
AGAGCTAAGATTGCGCGACC+TGG + chr5_3:50025156-50025175 None:intergenic 55.0%
GCAGCTGAAGGGATTGATCC+AGG - chr5_3:50025796-50025815 Msa0816110:five_prime_UTR 55.0%
ACAGTTACTGGGTGGGGTGG+GGG + chr5_3:50023445-50023464 None:intergenic 60.0%
GGGTTGTACCAGCTCGAAGC+TGG - chr5_3:50023707-50023726 Msa0816110:intron 60.0%
GAGATCGTCCAGCTTCGAGC+TGG + chr5_3:50023718-50023737 None:intergenic 60.0%
CTCGAAGCTGGACGATCTCC+CGG - chr5_3:50023719-50023738 Msa0816110:intron 60.0%
!! TCCCGGCGGTAGCTTTATGC+CGG - chr5_3:50023736-50023755 Msa0816110:intron 60.0%
TCCCGGCATAAAGCTACCGC+CGG + chr5_3:50023741-50023760 None:intergenic 60.0%
AGGAGGAGGAGGTGAAGTGG+CGG + chr5_3:50023904-50023923 None:intergenic 60.0%
AGGAGGAGGAGGAGGTGAAG+TGG + chr5_3:50023907-50023926 None:intergenic 60.0%
!! GTTTGGTGGTGGAGAGGTGG+TGG + chr5_3:50023947-50023966 None:intergenic 60.0%
!! AGGGGAGGAGTGTTTGGTGG+TGG + chr5_3:50023958-50023977 None:intergenic 60.0%
TGACCGGAATCGGAGTGAGG+TGG + chr5_3:50023984-50024003 None:intergenic 60.0%
CGTCGTCGTCGGAATCAGAG+TGG + chr5_3:50024016-50024035 None:intergenic 60.0%
GAGGGTTCCTGTTACCAGGC+CGG + chr5_3:50024802-50024821 None:intergenic 60.0%
AGAACTGTGGCCGCAGCTGA+AGG - chr5_3:50025784-50025803 Msa0816110:five_prime_UTR 60.0%
GAACTGTGGCCGCAGCTGAA+GGG - chr5_3:50025785-50025804 Msa0816110:five_prime_UTR 60.0%
GAAGCTGGACGATCTCCCGG+CGG - chr5_3:50023722-50023741 Msa0816110:intron 65.0%
CCCGGCATAAAGCTACCGCC+GGG + chr5_3:50023740-50023759 None:intergenic 65.0%
!! CCCGGCGGTAGCTTTATGCC+GGG - chr5_3:50023737-50023756 Msa0816110:intron 65.0%
AGGAGGAGGTGAAGTGGCGG+CGG + chr5_3:50023901-50023920 None:intergenic 65.0%
GGAGTGAGGTGGAGAAGGGG+AGG + chr5_3:50023973-50023992 None:intergenic 65.0%
GGAGAAGGTGGAGCTGGAGG+TGG + chr5_3:50024419-50024438 None:intergenic 65.0%
GGAGGAGAAGGTGGAGCTGG+AGG + chr5_3:50024422-50024441 None:intergenic 65.0%
CACCCACGGCTACACCTAGC+CGG - chr5_3:50024516-50024535 Msa0816110:CDS 65.0%
ACCCACGGCTACACCTAGCC+GGG - chr5_3:50024517-50024536 Msa0816110:CDS 65.0%
TCCCGGCTAGGTGTAGCCGT+GGG + chr5_3:50024521-50024540 None:intergenic 65.0%
ATCCCGGCTAGGTGTAGCCG+TGG + chr5_3:50024522-50024541 None:intergenic 65.0%
CCAGGCCGGAACGCGGAATT+GGG + chr5_3:50024788-50024807 None:intergenic 65.0%
ACCAGGCCGGAACGCGGAAT+TGG + chr5_3:50024789-50024808 None:intergenic 65.0%
CCTGTTACCAGGCCGGAACG+CGG + chr5_3:50024795-50024814 None:intergenic 65.0%
AGGAGGTGAAGTGGCGGCGG+CGG + chr5_3:50023898-50023917 None:intergenic 70.0%
CCCAATTCCGCGTTCCGGCC+TGG - chr5_3:50024785-50024804 Msa0816110:CDS 70.0%
CCGCGTTCCGGCCTGGTAAC+AGG - chr5_3:50024792-50024811 Msa0816110:CDS 70.0%
CTGGGTGGGGTGGGGGTGAG+AGG + chr5_3:50023438-50023457 None:intergenic 75.0%
AGGTGAAGTGGCGGCGGCGG+TGG + chr5_3:50023895-50023914 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 50023333 50025883 50023333 ID=Msa0816110;Name=Msa0816110
chr5_3 mRNA 50023333 50025883 50023333 ID=Msa0816110-mRNA-1;Parent=Msa0816110;Name=Msa0816110-mRNA-1;_AED=0.02;_eAED=0.02;_QI=372|1|0.66|1|1|1|3|0|565
chr5_3 exon 50023333 50023620 50023333 ID=Msa0816110-mRNA-1:exon:15059;Parent=Msa0816110-mRNA-1
chr5_3 exon 50023990 50024177 50023990 ID=Msa0816110-mRNA-1:exon:15058;Parent=Msa0816110-mRNA-1
chr5_3 exon 50024290 50025883 50024290 ID=Msa0816110-mRNA-1:exon:15057;Parent=Msa0816110-mRNA-1
chr5_3 five_prime_UTR 50025512 50025883 50025512 ID=Msa0816110-mRNA-1:five_prime_utr;Parent=Msa0816110-mRNA-1
chr5_3 CDS 50024290 50025511 50024290 ID=Msa0816110-mRNA-1:cds;Parent=Msa0816110-mRNA-1
chr5_3 CDS 50023990 50024177 50023990 ID=Msa0816110-mRNA-1:cds;Parent=Msa0816110-mRNA-1
chr5_3 CDS 50023333 50023620 50023333 ID=Msa0816110-mRNA-1:cds;Parent=Msa0816110-mRNA-1
Gene Sequence

>Msa0816110

ATGGGTTGTACCAGCTCGAAGCTGGACGATCTCCCGGCGGTAGCTTTATGCCGGGAACGCTGTACTTTTCTAGATGAAGCTATTCATCAACGTTACTCTCTTGCTGCTTCTCATCTTTCTTATATCAATTCTCTCACTTCTATTGGTCATTCTTTACATCACTTCATTCAACTTGACTCTACTATCTCCACCGCCGCCGCCACTTCACCTCCTCCTCCTCCTAAAACTAATACCAATAACCACCACCTCTCCACCACCAAACACTCCTCCCCTTCTCCACCTCACTCCGATTCCGGTCATCTTGATTTCCACTCTGATTCCGACGACGACGATGAACACCAATTTCACCATGACGACCACCTCGATGATCATGATGATGATGATTTCGATTCTTCACCTCCTCACAAACAACACCACTACTACAATGATTCACAACCACATCATCAATTTCACATGAATTTCGCTAAGAACAAACCACCTCCACCTTCTTCAATCGTTTACGAACACAGACCTATGACTAACCAAACTGTCTATGTCGGTGAATCTTCTTCTTCCTCATCTTATTACAACCCTTATCAACAACAACAACCACCACCACCATATCCATATCCACCATATAACAACAGTAACAACTATTACGGTTATTCAAATCCTCCTCCTTCTTCTTCCTTCTATGGATCTTCACCACCTCCTATAGCTCCTTCTTCAAAGCCACCTCCAGCTCCACCTTCTCCTCCAAAAACTTCTACTTGGGATTTCCTCAATTTCTTCGAAAACGACGAGAAATACTATCCACAGATGACGCAATACACACCCACGGCTACACCTAGCCGGGATTCAAAGGATGTGAGGGAGGAGGAAGGGATTCCTGATTTGGAAGACGAGGATGAAGTTGTTAAACAGGTACATGGAGATCAAAAGCTTGTTCACCCACCTAATTCTAATCATTCCAATGATCATCATGATCATGGTCATCTTGAGGATGAAGATGATGAGTCTGAAGTTGAATATGAAGTTCATGTTGTAGATAAGAAAGTTGTTAATGATGATGATGATGATAAGCTCAAGTCCAAAGTTAAGCCCAATTCCGCGTTCCGGCCTGGTAACAGGAACCCTCTTGAGGTTGCCAGAGAAATTCAGATTCTTTTTCAGAAGGCTTCTGATTCCGGTTCACATATCGCGCATATCCTCGAAGTTGGAAAGCTTCGATATCATCACAAAGCTACTTCCAAGATGTTGCATCTGGTTGCTCCTTCATCGTCTGTGGTGTCTTCTGCTTCAAGAAATGCACAACCCGTTGATGCTAATAGCGTGGATCTTGACGTTGAACTCACTACCAGGTCGCGCAATCTTAGCTCTACGCTCCACAAGCTATATCTATGGGAGAAGAAACTCTATCAGGAAGTTAAGGCAGAGGAAAAAATGCGGGTCATTCATGATAGGAAGTGTCGCAAACTAAAGCGTTTAGAAGAAAGAGGTGCTGATTTTGATAAAGTTGGTTTAACTCGAACTGTGATTGGAGATCTCTCCACAAAAATAAGTATGGCAATCAATGTTGTTGACAAGATTTCTATGACGATAAATAAGATAAGGGATGAAGAACTGTGGCCGCAGCTGAAGGGATTGATCCAGGGGTATGTTAACTTAACAACTTCCAATCTTGTTTGTACTAGTTCCTTAAATTTTCTCTATTCCTGA
Protein sequence

>Msa0816110

MGCTSSKLDDLPAVALCRERCTFLDEAIHQRYSLAASHLSYINSLTSIGHSLHHFIQLDSTISTAAATSPPPPPKTNTNNHHLSTTKHSSPSPPHSDSGHLDFHSDSDDDDEHQFHHDDHLDDHDDDDFDSSPPHKQHHYYNDSQPHHQFHMNFAKNKPPPPSSIVYEHRPMTNQTVYVGESSSSSSYYNPYQQQQPPPPYPYPPYNNSNNYYGYSNPPPSSSFYGSSPPPIAPSSKPPPAPPSPPKTSTWDFLNFFENDEKYYPQMTQYTPTATPSRDSKDVREEEGIPDLEDEDEVVKQVHGDQKLVHPPNSNHSNDHHDHGHLEDEDDESEVEYEVHVVDKKVVNDDDDDKLKSKVKPNSAFRPGNRNPLEVAREIQILFQKASDSGSHIAHILEVGKLRYHHKATSKMLHLVAPSSSVVSSASRNAQPVDANSVDLDVELTTRSRNLSSTLHKLYLWEKKLYQEVKAEEKMRVIHDRKCRKLKRLEERGADFDKVGLTRTVIGDLSTKISMAINVVDKISMTINKIRDEELWPQLKGLIQGYVNLTTSNLVCTSSLNFLYS*