Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0821020 | XP_003617183.2 | 98.190 | 663 | 10 | 1 | 16 | 676 | 1 | 663 | 0.0 | 1323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0821020 | G7KCS1 | 98.190 | 663 | 10 | 1 | 16 | 676 | 1 | 663 | 0.0 | 1323 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0781020 | Msa0821020 | 0.851390 | 9.154371e-61 | -8.615850e-47 |
| Msa0295250 | Msa0821020 | 0.818439 | 1.958905e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0821020 | MtrunA17_Chr5g0441221 | 98.190 | 663 | 10 | 1 | 16 | 676 | 1 | 663 | 0.0 | 1323 |
| Msa0821020 | MtrunA17_Chr8g0354221 | 39.143 | 677 | 306 | 19 | 32 | 674 | 18 | 622 | 1.67e-120 | 372 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0821020 | AT2G26920.1 | 50.147 | 678 | 279 | 23 | 15 | 672 | 5 | 643 | 2.04e-180 | 528 |
| Msa0821020 | AT5G12120.1 | 41.826 | 679 | 308 | 22 | 16 | 671 | 1 | 615 | 8.34e-140 | 422 |
Find 199 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCAGGGTCAAATGCTTTA+TGG | 0.123402 | 5_3:+58749357 | Msa0821020:CDS |
| CTGCTTTGCATTTACAGTTT+GGG | 0.252305 | 5_3:-58748907 | None:intergenic |
| TCTTCTCTAGGTCTCTTTCC+AGG | 0.258798 | 5_3:+58749221 | Msa0821020:CDS |
| CCTGCTTTGCATTTACAGTT+TGG | 0.282382 | 5_3:-58748908 | None:intergenic |
| AAAGGGTCGGCAGCCACATC+AGG | 0.298031 | 5_3:+58749245 | Msa0821020:CDS |
| GGGCCGCTGCATTACAACTA+TGG | 0.298603 | 5_3:-58748886 | None:intergenic |
| GTGGACTTTGCAGAAGCCTT+TGG | 0.301633 | 5_3:-58747718 | None:intergenic |
| AAACTTCTGCTGCTGGTTCC+CGG | 0.303673 | 5_3:+58749552 | Msa0821020:CDS |
| TGAGCCCTACTCTTTGTAAA+AGG | 0.306304 | 5_3:-58749392 | None:intergenic |
| GGGTCAAATGCTTTATGGTT+AGG | 0.318606 | 5_3:+58749362 | Msa0821020:CDS |
| ACGTATGATTCAAATGCTTC+TGG | 0.323622 | 5_3:+58749416 | Msa0821020:CDS |
| GGAACTACTTCCGGCTTAAC+AGG | 0.331040 | 5_3:-58747994 | None:intergenic |
| TGATTAGAACTAAGATAGTT+TGG | 0.333483 | 5_3:-58749056 | None:intergenic |
| ATCTAAGTCTAAAGACAAAA+AGG | 0.338966 | 5_3:+58747681 | Msa0821020:CDS |
| TCGCCAGTTTCCTCTGGCTT+TGG | 0.342993 | 5_3:-58748471 | None:intergenic |
| TCTAACAATGGTAGTTGGTC+TGG | 0.345025 | 5_3:+58747934 | Msa0821020:CDS |
| CACCAGCATAGACTGGTCTT+TGG | 0.346817 | 5_3:+58749319 | Msa0821020:CDS |
| GGATTGCAGACATGGAAATT+AGG | 0.348968 | 5_3:+58748337 | Msa0821020:CDS |
| TCCTTCTGTTTCTTATTCAC+TGG | 0.353880 | 5_3:+58748761 | Msa0821020:CDS |
| CTCCATCTCGGTAAAATGAT+AGG | 0.354468 | 5_3:+58749636 | Msa0821020:exon |
| GCATGTGAGCGTAAATTTCT+TGG | 0.355252 | 5_3:-58749785 | None:intergenic |
| CTTGCTGCTGCTTCTTCTCT+AGG | 0.361717 | 5_3:+58749209 | Msa0821020:CDS |
| TTAGGCAGCATTCTCTTTAG+AGG | 0.373297 | 5_3:-58748669 | None:intergenic |
| TCGCTGATGTGTCCAAAGTA+TGG | 0.374849 | 5_3:-58747804 | None:intergenic |
| AGTGCATACAATCCACTATT+AGG | 0.375294 | 5_3:+58747775 | Msa0821020:CDS |
| CTGCTGCTGGTTCCCGGGAG+TGG | 0.379180 | 5_3:+58749558 | Msa0821020:CDS |
| ATTAGGAACATTCCATACTT+TGG | 0.389928 | 5_3:+58747792 | Msa0821020:CDS |
| CCAGTTTCCTCTGGCTTTGG+TGG | 0.390502 | 5_3:-58748468 | None:intergenic |
| CCCCAACAACAGTTTGTTGC+TGG | 0.390795 | 5_3:+58749104 | Msa0821020:CDS |
| GTTAAGCCGGAAGTAGTTCC+TGG | 0.391344 | 5_3:+58747997 | Msa0821020:CDS |
| GGGCATCTTCTCCGGTCGAC+TGG | 0.393193 | 5_3:+58749267 | Msa0821020:CDS |
| TGCTCAACAGTTCGTGGCCA+TGG | 0.394089 | 5_3:+58748152 | Msa0821020:CDS |
| TCAGCTCCAGGAACTACTTC+CGG | 0.394968 | 5_3:-58748003 | None:intergenic |
| CATTACAACTATGGGTTCCT+TGG | 0.398215 | 5_3:-58748877 | None:intergenic |
| CCACCAAAGCCAGAGGAAAC+TGG | 0.400181 | 5_3:+58748468 | Msa0821020:CDS |
| CTGTTTCTAACAATGGTAGT+TGG | 0.403136 | 5_3:+58747929 | Msa0821020:CDS |
| CCAATCGAGGGAATGGCAAC+TGG | 0.405317 | 5_3:+58749159 | Msa0821020:CDS |
| TCTGCAAAGTCCACAGGATC+TGG | 0.406240 | 5_3:+58747727 | Msa0821020:CDS |
| ATGGGTTCCTTGGCTGCTCC+AGG | 0.408221 | 5_3:-58748867 | None:intergenic |
| GCCAGCAACAAACTGTTGTT+GGG | 0.410054 | 5_3:-58749105 | None:intergenic |
| GGTCAAATGCTTTATGGTTA+GGG | 0.410922 | 5_3:+58749363 | Msa0821020:CDS |
| ATAGACTGGTCTTTGGATAG+AGG | 0.416298 | 5_3:+58749326 | Msa0821020:CDS |
| CCTGGCAGCTTGGTGGTAGC+TGG | 0.419621 | 5_3:+58747892 | Msa0821020:CDS |
| CACATCAGGGGCATCTTCTC+CGG | 0.422308 | 5_3:+58749259 | Msa0821020:CDS |
| CTAGGTCTCTTTCCAGGGAA+AGG | 0.422965 | 5_3:+58749227 | Msa0821020:CDS |
| GTATGGAATGTTCCTAATAG+TGG | 0.428876 | 5_3:-58747787 | None:intergenic |
| CTAACAATGGTAGTTGGTCT+GGG | 0.429929 | 5_3:+58747935 | Msa0821020:CDS |
| TGAGAGCAATGAACCATTTG+AGG | 0.434233 | 5_3:-58749474 | None:intergenic |
| TCTGCTGAAACTTCTGCTGC+TGG | 0.437686 | 5_3:+58749545 | Msa0821020:CDS |
| CCAGTTGCCATTCCCTCGAT+TGG | 0.440574 | 5_3:-58749159 | None:intergenic |
| GGTAGTACTGTCCCGATGGC+TGG | 0.441652 | 5_3:+58749500 | Msa0821020:CDS |
| GTGGCTGCCGACCCTTTCCC+TGG | 0.442698 | 5_3:-58749239 | None:intergenic |
| TCTGGCTTTGGTGGAGCAGA+TGG | 0.448650 | 5_3:-58748459 | None:intergenic |
| ACTTCACCAATGCATTCTAA+TGG | 0.449451 | 5_3:+58747835 | Msa0821020:CDS |
| ACAAAAGCAGCTATTACAAA+TGG | 0.452388 | 5_3:+58748612 | Msa0821020:CDS |
| GACAAAAGGTGGCCTGGTGC+AGG | 0.454009 | 5_3:+58748732 | Msa0821020:CDS |
| GCATTATTTAGATTACTCAT+TGG | 0.454652 | 5_3:-58749837 | None:intergenic |
| GGAGGATCGCCAGTTTCCTC+TGG | 0.455802 | 5_3:-58748477 | None:intergenic |
| ATAGCTTCTACACTGTTAGT+TGG | 0.456684 | 5_3:-58748984 | None:intergenic |
| CGCTTGTCATTATCAGCTCC+AGG | 0.460287 | 5_3:-58748015 | None:intergenic |
| AATGGTTCATTGCTCTCAAA+TGG | 0.465755 | 5_3:+58749479 | Msa0821020:CDS |
| GCAGAAGGAAAGGCGAGCAC+AGG | 0.467307 | 5_3:+58748077 | Msa0821020:CDS |
| ATCAACAATGGTAAGCAGTC+AGG | 0.468966 | 5_3:+58748504 | Msa0821020:CDS |
| TGCCAGCAACAAACTGTTGT+TGG | 0.468974 | 5_3:-58749106 | None:intergenic |
| TAGGTATGGATGTTCAAAAC+AGG | 0.471145 | 5_3:+58748356 | Msa0821020:CDS |
| TGTTGGTGGTAAGTTTCAGT+GGG | 0.471392 | 5_3:+58749750 | Msa0821020:three_prime_UTR |
| ATGAGATCATTGCCCTCAAA+TGG | 0.472833 | 5_3:+58749461 | Msa0821020:CDS |
| TACCAACTGGCAGACATTCC+AGG | 0.473665 | 5_3:-58748960 | None:intergenic |
| GAATGCTGCCTAAGTCTGAA+TGG | 0.473977 | 5_3:+58748679 | Msa0821020:CDS |
| TTCTAATCCTCCTGTTAAGC+CGG | 0.474223 | 5_3:+58747984 | Msa0821020:CDS |
| AACTTCTGCTGCTGGTTCCC+GGG | 0.476835 | 5_3:+58749553 | Msa0821020:CDS |
| CTTCTCTAGGTCTCTTTCCA+GGG | 0.479106 | 5_3:+58749222 | Msa0821020:CDS |
| GTTGGGGTTGATATTGAAGT+TGG | 0.479183 | 5_3:-58749088 | None:intergenic |
| AATGTGTGTGGATTTGTTGT+TGG | 0.479232 | 5_3:+58749702 | Msa0821020:three_prime_UTR |
| CTGTGAGGGTGATCTTGAAA+AGG | 0.480145 | 5_3:+58748401 | Msa0821020:CDS |
| AAATGATAAAACCACAGGTA+AGG | 0.482562 | 5_3:+58748278 | Msa0821020:CDS |
| CAAAAGGAGAACTCCACTCC+CGG | 0.482947 | 5_3:-58749571 | None:intergenic |
| GAGAGCAATGAACCATTTGA+GGG | 0.484214 | 5_3:-58749473 | None:intergenic |
| TGCTTTGCATTTACAGTTTG+GGG | 0.485797 | 5_3:-58748906 | None:intergenic |
| GGTGGTAAGTTTCAGTGGGA+GGG | 0.490370 | 5_3:+58749754 | Msa0821020:three_prime_UTR |
| AGCAATAGTTCATCACCTCC+TGG | 0.491637 | 5_3:+58748942 | Msa0821020:CDS |
| CATCTTGCAATCCAGCCATC+GGG | 0.491990 | 5_3:-58749511 | None:intergenic |
| GGACTAGGATTTCTAGTACT+AGG | 0.493220 | 5_3:-58749035 | None:intergenic |
| AGTTGGTTCAGAGAAGGAAC+AGG | 0.493633 | 5_3:-58748561 | None:intergenic |
| GACACTTGCTCAACAGTTCG+TGG | 0.494494 | 5_3:+58748146 | Msa0821020:CDS |
| GAAGAAGCAGCAGCAAGCGT+TGG | 0.494709 | 5_3:-58749203 | None:intergenic |
| TTCCCTCGATTGGTTGCTTG+AGG | 0.496086 | 5_3:-58749149 | None:intergenic |
| TCTCCGGTCGACTGGAGCAC+TGG | 0.496115 | 5_3:+58749275 | Msa0821020:CDS |
| TAGGTCTCTTTCCAGGGAAA+GGG | 0.499443 | 5_3:+58749228 | Msa0821020:CDS |
| CAAGCAACCAATCGAGGGAA+TGG | 0.500588 | 5_3:+58749152 | Msa0821020:CDS |
| CCATCTTGCAATCCAGCCAT+CGG | 0.500702 | 5_3:-58749512 | None:intergenic |
| CCACTATATTATCTGACAAA+AGG | 0.502077 | 5_3:+58748718 | Msa0821020:CDS |
| TTAGACTTAGATCGGGATGC+AGG | 0.502369 | 5_3:-58747670 | None:intergenic |
| CGGTCGACTGGAGCACTGGC+GGG | 0.502881 | 5_3:+58749279 | Msa0821020:CDS |
| GAACTAAGATAGTTTGGACT+AGG | 0.503214 | 5_3:-58749050 | None:intergenic |
| TTAAGGTGTAGGAGCATGAC+TGG | 0.505166 | 5_3:+58746393 | Msa0821020:intron |
| TTTGTCTTTAGACTTAGATC+GGG | 0.507117 | 5_3:-58747677 | None:intergenic |
| GGCCGCTGCATTACAACTAT+GGG | 0.507602 | 5_3:-58748885 | None:intergenic |
| AACATCAACGGCAGAAGGAA+AGG | 0.507663 | 5_3:+58748067 | Msa0821020:CDS |
| TTGATTACACCAGCATAGAC+TGG | 0.511950 | 5_3:+58749312 | Msa0821020:CDS |
| TGAATGGGTAAAGCCACAAC+AGG | 0.512178 | 5_3:+58748695 | Msa0821020:CDS |
| ACTGTTAGTTGGATACCAAC+TGG | 0.513765 | 5_3:-58748973 | None:intergenic |
| GATAGAGGTTTATCTTCACC+AGG | 0.514543 | 5_3:+58749341 | Msa0821020:CDS |
| GCTCAACAGTTCGTGGCCAT+GGG | 0.517297 | 5_3:+58748153 | Msa0821020:CDS |
| ATCCAAAGACCAGTCTATGC+TGG | 0.517728 | 5_3:-58749321 | None:intergenic |
| TGCTTACCATTGTTGATGAT+AGG | 0.519534 | 5_3:-58748498 | None:intergenic |
| CCAAACTGTAAATGCAAAGC+AGG | 0.521706 | 5_3:+58748908 | Msa0821020:CDS |
| TTATCTGACAAAAGGTGGCC+TGG | 0.523718 | 5_3:+58748726 | Msa0821020:CDS |
| AATGCTGCCTAAGTCTGAAT+GGG | 0.526135 | 5_3:+58748680 | Msa0821020:CDS |
| CCGGTCGACTGGAGCACTGG+CGG | 0.526434 | 5_3:+58749278 | Msa0821020:CDS |
| TCCATCTCGGTAAAATGATA+GGG | 0.527271 | 5_3:+58749637 | Msa0821020:exon |
| ACTTGCTAGGATTGCAGACA+TGG | 0.527530 | 5_3:+58748329 | Msa0821020:CDS |
| AAGGGTCGGCAGCCACATCA+GGG | 0.529884 | 5_3:+58749246 | Msa0821020:CDS |
| TTCTCATGAACGGGCAACAA+TGG | 0.530574 | 5_3:+58748179 | Msa0821020:CDS |
| GGCTTTGGTGGAGCAGATGG+TGG | 0.532561 | 5_3:-58748456 | None:intergenic |
| AATGATAAAACCACAGGTAA+GGG | 0.532780 | 5_3:+58748279 | Msa0821020:CDS |
| AGTGGATTGTATGCACTCGC+TGG | 0.532810 | 5_3:-58747769 | None:intergenic |
| GATGAACTATTGCTTGAGGC+TGG | 0.533771 | 5_3:-58748933 | None:intergenic |
| TATGATTCTGTTTCTAACAA+TGG | 0.537107 | 5_3:+58747922 | Msa0821020:CDS |
| CCGCCAGTGCTCCAGTCGAC+CGG | 0.537260 | 5_3:-58749278 | None:intergenic |
| TGGTGGTAAGTTTCAGTGGG+AGG | 0.538215 | 5_3:+58749753 | Msa0821020:three_prime_UTR |
| GAGCACAGGAGCTGCGCGAG+CGG | 0.540540 | 5_3:+58748091 | Msa0821020:CDS |
| TAACGAGCTTCAGTCTTAGC+AGG | 0.541606 | 5_3:-58748810 | None:intergenic |
| TGAACATCCTGGCAGCTTGG+TGG | 0.543031 | 5_3:+58747885 | Msa0821020:CDS |
| CCAGCTACCACCAAGCTGCC+AGG | 0.543637 | 5_3:-58747892 | None:intergenic |
| GGCAACTGGAATAGAGCGGC+GGG | 0.546579 | 5_3:+58749173 | Msa0821020:CDS |
| CTCCTGGAATGTCTGCCAGT+TGG | 0.547898 | 5_3:+58748958 | Msa0821020:CDS |
| TCTTCAACCTGGAGCAGCCA+AGG | 0.548837 | 5_3:+58748860 | Msa0821020:CDS |
| AGTTTGTTTCTTCTCCATCT+CGG | 0.549384 | 5_3:+58749624 | Msa0821020:CDS |
| AGAGTCATCGTTTCCTGTGA+GGG | 0.551605 | 5_3:+58748387 | Msa0821020:CDS |
| AGATGAACATCCTGGCAGCT+TGG | 0.552281 | 5_3:+58747882 | Msa0821020:CDS |
| TTGTTGGTGGTAAGTTTCAG+TGG | 0.552750 | 5_3:+58749749 | Msa0821020:three_prime_UTR |
| AAGGCTTCTGCAAAGTCCAC+AGG | 0.555324 | 5_3:+58747721 | Msa0821020:CDS |
| GATGAGACAGATGAACATCC+TGG | 0.556062 | 5_3:+58747874 | Msa0821020:CDS |
| TAGATTACTCATTGGATGAG+TGG | 0.558194 | 5_3:-58749829 | None:intergenic |
| ACATATCAGAAGAACTTGCT+AGG | 0.559375 | 5_3:+58748316 | Msa0821020:CDS |
| GGTGGAAGAGCCACTTGCAA+CGG | 0.559564 | 5_3:-58748789 | None:intergenic |
| GGCTTTACCCATTCAGACTT+AGG | 0.561908 | 5_3:-58748687 | None:intergenic |
| GGATCTGGCAGTGCAACAGC+TGG | 0.563837 | 5_3:+58747742 | Msa0821020:CDS |
| GAAGCTCGTTATGTGTCTGT+TGG | 0.565428 | 5_3:+58748822 | Msa0821020:CDS |
| GATAATATAGTGGCCTGTTG+TGG | 0.566558 | 5_3:-58748708 | None:intergenic |
| ATTGAATGAAGGTAGGGTGG+AGG | 0.567820 | 5_3:+58748209 | Msa0821020:CDS |
| ACTGGCTTCACCGTTGCAAG+TGG | 0.568620 | 5_3:+58748779 | Msa0821020:CDS |
| TGAACGGGCAACAATGGCAC+TGG | 0.568769 | 5_3:+58748185 | Msa0821020:CDS |
| GCAGACATGGAAATTAGGTA+TGG | 0.569296 | 5_3:+58748342 | Msa0821020:CDS |
| TTTCTAGTACTAGGAGCTTG+AGG | 0.569574 | 5_3:-58749026 | None:intergenic |
| TTACCATTGTTGATGATAGG+AGG | 0.569741 | 5_3:-58748495 | None:intergenic |
| GATCCTCAAGCAACCAATCG+AGG | 0.571295 | 5_3:+58749146 | Msa0821020:CDS |
| GTGGTAAGTTTCAGTGGGAG+GGG | 0.572759 | 5_3:+58749755 | Msa0821020:three_prime_UTR |
| AAAAGGAGAACTCCACTCCC+GGG | 0.573224 | 5_3:-58749570 | None:intergenic |
| ATGGCACTGGTATTGAATGA+AGG | 0.573546 | 5_3:+58748198 | Msa0821020:CDS |
| TGTTGCACTGCCAGATCCTG+TGG | 0.573912 | 5_3:-58747737 | None:intergenic |
| GAGAAAACATCAACGGCAGA+AGG | 0.574953 | 5_3:+58748062 | Msa0821020:CDS |
| GCTCGTTATGTGTCTGTTGG+CGG | 0.580743 | 5_3:+58748825 | Msa0821020:CDS |
| CCGATGGCTGGATTGCAAGA+TGG | 0.584359 | 5_3:+58749512 | Msa0821020:CDS |
| GAATGCATTGGTGAAGTAGA+GGG | 0.584467 | 5_3:-58747829 | None:intergenic |
| GGAGAAGAAACAAACTGTCT+CGG | 0.587949 | 5_3:-58749617 | None:intergenic |
| AGAATGCATTGGTGAAGTAG+AGG | 0.588041 | 5_3:-58747830 | None:intergenic |
| GCAGAAGTTATCTTATGTCA+AGG | 0.588458 | 5_3:+58748115 | Msa0821020:CDS |
| ATTCTGAGTTGGTTCAGAGA+AGG | 0.589965 | 5_3:-58748567 | None:intergenic |
| AAACGACCATTAGAATGCAT+TGG | 0.592625 | 5_3:-58747841 | None:intergenic |
| GAAGGATTAGATCCTGCACC+AGG | 0.592871 | 5_3:-58748744 | None:intergenic |
| GGTCAAAATGATAAAACCAC+AGG | 0.597816 | 5_3:+58748273 | Msa0821020:CDS |
| TTTCAAACTGCCCTTACCTG+TGG | 0.598059 | 5_3:-58748289 | None:intergenic |
| CTATATTATCTGACAAAAGG+TGG | 0.602851 | 5_3:+58748721 | Msa0821020:CDS |
| GCCAGTGAATAAGAAACAGA+AGG | 0.607367 | 5_3:-58748762 | None:intergenic |
| GGCTAGCAAGGAAACTCCAA+AGG | 0.608747 | 5_3:+58747702 | Msa0821020:CDS |
| ACTGGTATTGAATGAAGGTA+GGG | 0.610856 | 5_3:+58748203 | Msa0821020:CDS |
| CGGAGAAGATGCCCCTGATG+TGG | 0.615457 | 5_3:-58749258 | None:intergenic |
| AAATGGTAGTACTGTCCCGA+TGG | 0.616345 | 5_3:+58749496 | Msa0821020:CDS |
| AACCCATAGTTGTAATGCAG+CGG | 0.618585 | 5_3:+58748883 | Msa0821020:CDS |
| ATCCTCAAGCAACCAATCGA+GGG | 0.620883 | 5_3:+58749147 | Msa0821020:CDS |
| AGGGTCGGCAGCCACATCAG+GGG | 0.621205 | 5_3:+58749247 | Msa0821020:CDS |
| GTATGGATGTTCAAAACAGG+AGG | 0.624088 | 5_3:+58748359 | Msa0821020:CDS |
| GAAAGTGGTGACGAAGCAGA+TGG | 0.626235 | 5_3:+58748252 | Msa0821020:CDS |
| CACTGGTATTGAATGAAGGT+AGG | 0.626702 | 5_3:+58748202 | Msa0821020:CDS |
| ATGGCTGGATTGCAAGATGG+CGG | 0.629218 | 5_3:+58749515 | Msa0821020:CDS |
| ACTACTTCCGGCTTAACAGG+AGG | 0.631629 | 5_3:-58747991 | None:intergenic |
| GAGTTTCTAGTCAGAACCCA+AGG | 0.631834 | 5_3:+58748526 | Msa0821020:CDS |
| CGAGCTTCAGTCTTAGCAGG+TGG | 0.632037 | 5_3:-58748807 | None:intergenic |
| GGTATTGAATGAAGGTAGGG+TGG | 0.632718 | 5_3:+58748206 | Msa0821020:CDS |
| TAACAATGGTAGTTGGTCTG+GGG | 0.634934 | 5_3:+58747936 | Msa0821020:CDS |
| ATCTGCTCCACCAAAGCCAG+AGG | 0.635266 | 5_3:+58748461 | Msa0821020:CDS |
| CTAACAGTGTAGAAGCTATG+AGG | 0.637363 | 5_3:+58748988 | Msa0821020:CDS |
| GGGTGGAGGAATCAGTTGCA+TGG | 0.639297 | 5_3:+58748223 | Msa0821020:CDS |
| GTTGCATGGCTATTTGAAAG+TGG | 0.643958 | 5_3:+58748237 | Msa0821020:CDS |
| TGGCAACTGGAATAGAGCGG+CGG | 0.645893 | 5_3:+58749172 | Msa0821020:CDS |
| AAGAGTCATCGTTTCCTGTG+AGG | 0.647918 | 5_3:+58748386 | Msa0821020:CDS |
| AACCATAAAGCATTTGACCC+TGG | 0.650292 | 5_3:-58749359 | None:intergenic |
| CCAGCAACAAACTGTTGTTG+GGG | 0.651721 | 5_3:-58749104 | None:intergenic |
| AGAATGAGAGAAAACATCAA+CGG | 0.659594 | 5_3:+58748055 | Msa0821020:CDS |
| CCGTTCATGAGAAAATCCCA+TGG | 0.665117 | 5_3:-58748169 | None:intergenic |
| AGGTGATGAACTATTGCTTG+AGG | 0.665177 | 5_3:-58748937 | None:intergenic |
| GATCCTCCTATCATCAACAA+TGG | 0.672435 | 5_3:+58748492 | Msa0821020:CDS |
| TATGATTCAAATGCTTCTGG+AGG | 0.675828 | 5_3:+58749419 | Msa0821020:CDS |
| TCTCTTTCCAGGGAAAGGGT+CGG | 0.675962 | 5_3:+58749232 | Msa0821020:CDS |
| GAATGGCAACTGGAATAGAG+CGG | 0.696734 | 5_3:+58749169 | Msa0821020:CDS |
| ATAGAGGTTTATCTTCACCA+GGG | 0.707067 | 5_3:+58749342 | Msa0821020:CDS |
| CAACTGGCAGACATTCCAGG+AGG | 0.780395 | 5_3:-58748957 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAATATAATTCAATG+TGG | + | chr5_3:58746591-58746610 | Msa0821020:intron | 10.0% |
| !! | TATAAAATATAATTCAATGT+GGG | + | chr5_3:58746592-58746611 | Msa0821020:intron | 10.0% |
| !! | GAATTAAAAATATACAAAAA+TGG | - | chr5_3:58747159-58747178 | None:intergenic | 10.0% |
| !!! | ACCATTTTTATTTTATTTTT+TGG | + | chr5_3:58747511-58747530 | Msa0821020:intron | 10.0% |
| !! | TCCAAAAAATAAAATAAAAA+TGG | - | chr5_3:58747515-58747534 | None:intergenic | 10.0% |
| !!! | GTATATATATTGTGTTATTA+TGG | + | chr5_3:58745345-58745364 | Msa0821020:intron | 15.0% |
| !!! | TTTATTGTTTTAATCTGTTA+AGG | + | chr5_3:58746376-58746395 | Msa0821020:intron | 15.0% |
| !! | AAATATTACATTTGTATGTT+TGG | + | chr5_3:58746628-58746647 | Msa0821020:intron | 15.0% |
| !! | AAAACAATGTAATACTAAAC+GGG | - | chr5_3:58745665-58745684 | None:intergenic | 20.0% |
| !! | GAAAACAATGTAATACTAAA+CGG | - | chr5_3:58745666-58745685 | None:intergenic | 20.0% |
| !!! | AAGATTTTTTTAGTGAAAAC+TGG | + | chr5_3:58745698-58745717 | Msa0821020:intron | 20.0% |
| !! | AATACAGAAATAAAAAAAGG+AGG | - | chr5_3:58746042-58746061 | None:intergenic | 20.0% |
| !! | AGCAATACAGAAATAAAAAA+AGG | - | chr5_3:58746045-58746064 | None:intergenic | 20.0% |
| !!! | CAATTTTATCTTCTCATTTA+TGG | + | chr5_3:58746118-58746137 | Msa0821020:intron | 20.0% |
| !! | TTCATTTCAAATTGCAAATA+AGG | + | chr5_3:58746809-58746828 | Msa0821020:intron | 20.0% |
| !!! | AAACAATGAAAACATTGTTT+TGG | + | chr5_3:58746917-58746936 | Msa0821020:intron | 20.0% |
| !! | AAAGTATGAAAATCTACTAA+GGG | - | chr5_3:58747381-58747400 | None:intergenic | 20.0% |
| !! | TAAAGTATGAAAATCTACTA+AGG | - | chr5_3:58747382-58747401 | None:intergenic | 20.0% |
| !!! | TTATTTTCTTGTAATGTTAC+AGG | + | chr5_3:58747632-58747651 | Msa0821020:intron | 20.0% |
| !!! | TATTTTCTTGTAATGTTACA+GGG | + | chr5_3:58747633-58747652 | Msa0821020:intron | 20.0% |
| !!! | ATTTACAGTTTATGTTTTGT+TGG | + | chr5_3:58749733-58749752 | Msa0821020:three_prime_UTR | 20.0% |
| !! | TGATATACTTTTACAAAGCT+GGG | + | chr5_3:58745392-58745411 | Msa0821020:intron | 25.0% |
| ! | TTTGTGGAAGAATATTAAGT+TGG | + | chr5_3:58745597-58745616 | Msa0821020:intron | 25.0% |
| !!! | TGGTCATTTTAATGAGAATT+GGG | - | chr5_3:58746288-58746307 | None:intergenic | 25.0% |
| ! | AAACAATAAAGAATCACACA+GGG | - | chr5_3:58746366-58746385 | None:intergenic | 25.0% |
| ! | AAAACAATAAAGAATCACAC+AGG | - | chr5_3:58746367-58746386 | None:intergenic | 25.0% |
| ! | AGTTAAGAGTAAACATGTAA+GGG | - | chr5_3:58746441-58746460 | None:intergenic | 25.0% |
| !! | TTAACTGCTACTTAATTTGA+CGG | + | chr5_3:58746455-58746474 | Msa0821020:intron | 25.0% |
| ! | GTAATCTATATATTACACCT+TGG | + | chr5_3:58746659-58746678 | Msa0821020:intron | 25.0% |
| ! | TTAACATGTGAATAGAAAGT+GGG | - | chr5_3:58746724-58746743 | None:intergenic | 25.0% |
| ! | TTTAACATGTGAATAGAAAG+TGG | - | chr5_3:58746725-58746744 | None:intergenic | 25.0% |
| ! | GTTAAACAGTGAAAAATCAT+AGG | + | chr5_3:58746739-58746758 | Msa0821020:intron | 25.0% |
| ! | TTGAAGTCAGTAATGAAAAT+AGG | + | chr5_3:58747030-58747049 | Msa0821020:intron | 25.0% |
| ! | AAGTATGAAAATCTACTAAG+GGG | - | chr5_3:58747380-58747399 | None:intergenic | 25.0% |
| ! | TCATACTTTAAACTAGAGAA+CGG | + | chr5_3:58747392-58747411 | Msa0821020:intron | 25.0% |
| !! | GTAATTAGTTTCCATTTCAT+TGG | + | chr5_3:58747414-58747433 | Msa0821020:intron | 25.0% |
| ! | CAATACTAAATCCAATGAAA+TGG | - | chr5_3:58747428-58747447 | None:intergenic | 25.0% |
| ! | TGATATATGTATGAATCTGT+TGG | - | chr5_3:58747487-58747506 | None:intergenic | 25.0% |
| ! | ACAGATTCATACATATATCA+CGG | + | chr5_3:58747487-58747506 | Msa0821020:intron | 25.0% |
| !! | TTTTGTCTTTAGACTTAGAT+CGG | - | chr5_3:58747681-58747700 | None:intergenic | 25.0% |
| ! | ATCTAAGTCTAAAGACAAAA+AGG | + | chr5_3:58747681-58747700 | Msa0821020:CDS | 25.0% |
| !!! | TATGATTCTGTTTCTAACAA+TGG | + | chr5_3:58747922-58747941 | Msa0821020:CDS | 25.0% |
| ! | GATTATAAAAATCTTCAACC+TGG | + | chr5_3:58748849-58748868 | Msa0821020:CDS | 25.0% |
| ! | TGATTAGAACTAAGATAGTT+TGG | - | chr5_3:58749059-58749078 | None:intergenic | 25.0% |
| !! | AAAAGATCTTTTCCTTCAAA+AGG | - | chr5_3:58749590-58749609 | None:intergenic | 25.0% |
| ! | GCATTATTTAGATTACTCAT+TGG | - | chr5_3:58749840-58749859 | None:intergenic | 25.0% |
| ! | TGTGTTATTATGGTGATTTG+TGG | + | chr5_3:58745355-58745374 | Msa0821020:intron | 30.0% |
| ! | TATTATGGTGATTTGTGGTT+AGG | + | chr5_3:58745360-58745379 | Msa0821020:intron | 30.0% |
| ! | CTGATATACTTTTACAAAGC+TGG | + | chr5_3:58745391-58745410 | Msa0821020:intron | 30.0% |
| !! | GGAAGAATATTAAGTTGGTT+TGG | + | chr5_3:58745602-58745621 | Msa0821020:intron | 30.0% |
| GGGTAAACAACAAATGAAAA+GGG | - | chr5_3:58745645-58745664 | None:intergenic | 30.0% | |
| ! | TGTTCTTCAGCTAGAATTTT+GGG | + | chr5_3:58745892-58745911 | Msa0821020:intron | 30.0% |
| ! | TGTTTTACACGTGTGAAAAA+AGG | + | chr5_3:58746081-58746100 | Msa0821020:intron | 30.0% |
| ! | GTTTTACACGTGTGAAAAAA+GGG | + | chr5_3:58746082-58746101 | Msa0821020:intron | 30.0% |
| !!! | CTACTTTTTTACTGTCAGAT+GGG | + | chr5_3:58746242-58746261 | Msa0821020:intron | 30.0% |
| !! | CTGGTCATTTTAATGAGAAT+TGG | - | chr5_3:58746289-58746308 | None:intergenic | 30.0% |
| !! | GTTTTAATCTGTTAAGGTGT+AGG | + | chr5_3:58746382-58746401 | Msa0821020:intron | 30.0% |
| TTAAGAGTAAACATGTAAGG+GGG | - | chr5_3:58746439-58746458 | None:intergenic | 30.0% | |
| GTTAAGAGTAAACATGTAAG+GGG | - | chr5_3:58746440-58746459 | None:intergenic | 30.0% | |
| CAGTTAAGAGTAAACATGTA+AGG | - | chr5_3:58746442-58746461 | None:intergenic | 30.0% | |
| ! | TAACTGCTACTTAATTTGAC+GGG | + | chr5_3:58746456-58746475 | Msa0821020:intron | 30.0% |
| ACTGCTAGAAAAAAGATAGA+TGG | + | chr5_3:58746867-58746886 | Msa0821020:intron | 30.0% | |
| AAAAAGATAGATGGATAGCA+AGG | + | chr5_3:58746876-58746895 | Msa0821020:intron | 30.0% | |
| AAAAGATAGATGGATAGCAA+GGG | + | chr5_3:58746877-58746896 | Msa0821020:intron | 30.0% | |
| TAGATTTAATCCTTTCCTCA+CGG | - | chr5_3:58746990-58747009 | None:intergenic | 30.0% | |
| TAGTAGAGTAAAGTGAAAGT+GGG | - | chr5_3:58747136-58747155 | None:intergenic | 30.0% | |
| CGGTAAATACTAATCTTTCT+GGG | - | chr5_3:58747215-58747234 | None:intergenic | 30.0% | |
| TCGGTAAATACTAATCTTTC+TGG | - | chr5_3:58747216-58747235 | None:intergenic | 30.0% | |
| CAGGTATAGTTTACAATGTT+CGG | - | chr5_3:58747235-58747254 | None:intergenic | 30.0% | |
| GAACATTGTAAACTATACCT+GGG | + | chr5_3:58747234-58747253 | Msa0821020:intron | 30.0% | |
| TTAAGAGGAATATTATTCCC+AGG | - | chr5_3:58747254-58747273 | None:intergenic | 30.0% | |
| TTAAGAGGATTATTATTCCC+AGG | - | chr5_3:58747302-58747321 | None:intergenic | 30.0% | |
| TACAATGTCATTCAGTCAAT+AGG | + | chr5_3:58747536-58747555 | Msa0821020:intron | 30.0% | |
| TTTGTCTTTAGACTTAGATC+GGG | - | chr5_3:58747680-58747699 | None:intergenic | 30.0% | |
| ATTAGGAACATTCCATACTT+TGG | + | chr5_3:58747792-58747811 | Msa0821020:CDS | 30.0% | |
| ! | GATGTTTTCTCTCATTCTTT+TGG | - | chr5_3:58748053-58748072 | None:intergenic | 30.0% |
| AGAATGAGAGAAAACATCAA+CGG | + | chr5_3:58748055-58748074 | Msa0821020:CDS | 30.0% | |
| AAATGATAAAACCACAGGTA+AGG | + | chr5_3:58748278-58748297 | Msa0821020:CDS | 30.0% | |
| AATGATAAAACCACAGGTAA+GGG | + | chr5_3:58748279-58748298 | Msa0821020:CDS | 30.0% | |
| !! | CTTTTTCATCTATTCTGAGT+TGG | - | chr5_3:58748581-58748600 | None:intergenic | 30.0% |
| ACAAAAGCAGCTATTACAAA+TGG | + | chr5_3:58748612-58748631 | Msa0821020:CDS | 30.0% | |
| !! | AGGTTGTATATTTTTGCTAC+TGG | - | chr5_3:58748652-58748671 | None:intergenic | 30.0% |
| ! | CCTTTTGTCAGATAATATAG+TGG | - | chr5_3:58748721-58748740 | None:intergenic | 30.0% |
| CCACTATATTATCTGACAAA+AGG | + | chr5_3:58748718-58748737 | Msa0821020:CDS | 30.0% | |
| CTATATTATCTGACAAAAGG+TGG | + | chr5_3:58748721-58748740 | Msa0821020:CDS | 30.0% | |
| ! | TTTCACCTTTTACAAAGAGT+AGG | + | chr5_3:58749387-58749406 | Msa0821020:CDS | 30.0% |
| ! | TTCACCTTTTACAAAGAGTA+GGG | + | chr5_3:58749388-58749407 | Msa0821020:CDS | 30.0% |
| ! | ACAAATCCACACACATTTTT+GGG | - | chr5_3:58749699-58749718 | None:intergenic | 30.0% |
| ! | AACAAATCCACACACATTTT+TGG | - | chr5_3:58749700-58749719 | None:intergenic | 30.0% |
| !! | TACAGTTTATGTTTTGTTGG+TGG | + | chr5_3:58749736-58749755 | Msa0821020:three_prime_UTR | 30.0% |
| AACAATGACTCTATGTAGCA+CGG | - | chr5_3:58745575-58745594 | None:intergenic | 35.0% | |
| !! | ATAGAGTCATTGTTGCTTTG+TGG | + | chr5_3:58745581-58745600 | Msa0821020:intron | 35.0% |
| CGGGTAAACAACAAATGAAA+AGG | - | chr5_3:58745646-58745665 | None:intergenic | 35.0% | |
| ! | CTGTTCTTCAGCTAGAATTT+TGG | + | chr5_3:58745891-58745910 | Msa0821020:intron | 35.0% |
| ! | GTTCTTCAGCTAGAATTTTG+GGG | + | chr5_3:58745893-58745912 | Msa0821020:intron | 35.0% |
| AAGATCATATCCTGCTTCAT+TGG | - | chr5_3:58745944-58745963 | None:intergenic | 35.0% | |
| ! | CCCTATTTTCATGTTCAGAT+GGG | - | chr5_3:58745980-58745999 | None:intergenic | 35.0% |
| CCCATCTGAACATGAAAATA+GGG | + | chr5_3:58745977-58745996 | Msa0821020:intron | 35.0% | |
| CCATCTGACAGTAAAAAAGT+AGG | - | chr5_3:58746244-58746263 | None:intergenic | 35.0% | |
| !!! | CCTACTTTTTTACTGTCAGA+TGG | + | chr5_3:58746241-58746260 | Msa0821020:intron | 35.0% |
| GGGAGCTTATACAATATACA+TGG | - | chr5_3:58746268-58746287 | None:intergenic | 35.0% | |
| TCTGGCTGTACAAATAAATG+AGG | + | chr5_3:58746319-58746338 | Msa0821020:intron | 35.0% | |
| AATAAATGAGGCGACATCAT+TGG | + | chr5_3:58746331-58746350 | Msa0821020:intron | 35.0% | |
| TGACGGGAAAGATATTTGTT+TGG | + | chr5_3:58746472-58746491 | Msa0821020:intron | 35.0% | |
| ACTTGTTCACTTTCTTTCCT+TGG | + | chr5_3:58746527-58746546 | Msa0821020:intron | 35.0% | |
| GGGAAAAAACGAAAAAACCA+AGG | - | chr5_3:58746547-58746566 | None:intergenic | 35.0% | |
| ATAGAAAGTGGGAAACACAT+GGG | - | chr5_3:58746713-58746732 | None:intergenic | 35.0% | |
| AATAGAAAGTGGGAAACACA+TGG | - | chr5_3:58746714-58746733 | None:intergenic | 35.0% | |
| AAAGTTGCGAAAATGAAGAC+TGG | - | chr5_3:58746786-58746805 | None:intergenic | 35.0% | |
| AGATTCAGCATTTCAAGAGA+AGG | - | chr5_3:58746943-58746962 | None:intergenic | 35.0% | |
| AAATGTAGAAGATAACCGTG+AGG | + | chr5_3:58746972-58746991 | Msa0821020:intron | 35.0% | |
| GTAGTAGAGTAAAGTGAAAG+TGG | - | chr5_3:58747137-58747156 | None:intergenic | 35.0% | |
| CGAACATTGTAAACTATACC+TGG | + | chr5_3:58747233-58747252 | Msa0821020:intron | 35.0% | |
| AATGTGGGCACATTATTAAG+AGG | - | chr5_3:58747269-58747288 | None:intergenic | 35.0% | |
| CCAGGTATAGTTTACAATGT+GGG | - | chr5_3:58747236-58747255 | None:intergenic | 35.0% | |
| CCACATTGTAAACTATACCT+GGG | + | chr5_3:58747282-58747301 | Msa0821020:intron | 35.0% | |
| ATCCTCTTAATAATGTTCCC+AGG | + | chr5_3:58747312-58747331 | Msa0821020:intron | 35.0% | |
| TACCTGGGAACATTATTAAG+AGG | - | chr5_3:58747317-58747336 | None:intergenic | 35.0% | |
| !! | TCAGTCAATAGGTTTTGTCT+TGG | + | chr5_3:58747547-58747566 | Msa0821020:intron | 35.0% |
| TAAAGACAAAAAGGCTAGCA+AGG | + | chr5_3:58747690-58747709 | Msa0821020:CDS | 35.0% | |
| AGTGCATACAATCCACTATT+AGG | + | chr5_3:58747775-58747794 | Msa0821020:CDS | 35.0% | |
| GTATGGAATGTTCCTAATAG+TGG | - | chr5_3:58747790-58747809 | None:intergenic | 35.0% | |
| ACTTCACCAATGCATTCTAA+TGG | + | chr5_3:58747835-58747854 | Msa0821020:CDS | 35.0% | |
| AAACGACCATTAGAATGCAT+TGG | - | chr5_3:58747844-58747863 | None:intergenic | 35.0% | |
| !! | TGCATTCTAATGGTCGTTTT+CGG | + | chr5_3:58747845-58747864 | Msa0821020:CDS | 35.0% |
| !! | CTGTTTCTAACAATGGTAGT+TGG | + | chr5_3:58747929-58747948 | Msa0821020:CDS | 35.0% |
| ! | GTTTTCTCTCATTCTTTTGG+CGG | - | chr5_3:58748050-58748069 | None:intergenic | 35.0% |
| GCAGAAGTTATCTTATGTCA+AGG | + | chr5_3:58748115-58748134 | Msa0821020:CDS | 35.0% | |
| ! | ACTGGTATTGAATGAAGGTA+GGG | + | chr5_3:58748203-58748222 | Msa0821020:CDS | 35.0% |
| GGTCAAAATGATAAAACCAC+AGG | + | chr5_3:58748273-58748292 | Msa0821020:CDS | 35.0% | |
| ! | ACATATCAGAAGAACTTGCT+AGG | + | chr5_3:58748316-58748335 | Msa0821020:CDS | 35.0% |
| TAGGTATGGATGTTCAAAAC+AGG | + | chr5_3:58748356-58748375 | Msa0821020:CDS | 35.0% | |
| !! | TTACCATTGTTGATGATAGG+AGG | - | chr5_3:58748498-58748517 | None:intergenic | 35.0% |
| !! | TGCTTACCATTGTTGATGAT+AGG | - | chr5_3:58748501-58748520 | None:intergenic | 35.0% |
| ! | TCCTTCTGTTTCTTATTCAC+TGG | + | chr5_3:58748761-58748780 | Msa0821020:CDS | 35.0% |
| TGCTTTGCATTTACAGTTTG+GGG | - | chr5_3:58748909-58748928 | None:intergenic | 35.0% | |
| CTGCTTTGCATTTACAGTTT+GGG | - | chr5_3:58748910-58748929 | None:intergenic | 35.0% | |
| ATAGCTTCTACACTGTTAGT+TGG | - | chr5_3:58748987-58749006 | None:intergenic | 35.0% | |
| GAACTAAGATAGTTTGGACT+AGG | - | chr5_3:58749053-58749072 | None:intergenic | 35.0% | |
| ATAGAGGTTTATCTTCACCA+GGG | + | chr5_3:58749342-58749361 | Msa0821020:CDS | 35.0% | |
| GGTCAAATGCTTTATGGTTA+GGG | + | chr5_3:58749363-58749382 | Msa0821020:CDS | 35.0% | |
| ACGTATGATTCAAATGCTTC+TGG | + | chr5_3:58749416-58749435 | Msa0821020:CDS | 35.0% | |
| TATGATTCAAATGCTTCTGG+AGG | + | chr5_3:58749419-58749438 | Msa0821020:CDS | 35.0% | |
| AATGGTTCATTGCTCTCAAA+TGG | + | chr5_3:58749479-58749498 | Msa0821020:CDS | 35.0% | |
| ! | AGTTTGTTTCTTCTCCATCT+CGG | + | chr5_3:58749624-58749643 | Msa0821020:CDS | 35.0% |
| TCCATCTCGGTAAAATGATA+GGG | + | chr5_3:58749637-58749656 | Msa0821020:exon | 35.0% | |
| GAAAAACCCAAAAATGTGTG+TGG | + | chr5_3:58749690-58749709 | Msa0821020:three_prime_UTR | 35.0% | |
| !! | AATGTGTGTGGATTTGTTGT+TGG | + | chr5_3:58749702-58749721 | Msa0821020:three_prime_UTR | 35.0% |
| TAGATTACTCATTGGATGAG+TGG | - | chr5_3:58749832-58749851 | None:intergenic | 35.0% | |
| !! | TTTTCAAGCCAAAGCTTGCA+GGG | - | chr5_3:58745839-58745858 | None:intergenic | 40.0% |
| !! | ATTTTCAAGCCAAAGCTTGC+AGG | - | chr5_3:58745840-58745859 | None:intergenic | 40.0% |
| !! | TGCAAGCTTTGGCTTGAAAA+TGG | + | chr5_3:58745839-58745858 | Msa0821020:intron | 40.0% |
| ! | TTTTCATGTTCAGATGGGCA+TGG | - | chr5_3:58745975-58745994 | None:intergenic | 40.0% |
| GCCCATCTGAACATGAAAAT+AGG | + | chr5_3:58745976-58745995 | Msa0821020:intron | 40.0% | |
| ! | GCCCTATTTTCATGTTCAGA+TGG | - | chr5_3:58745981-58746000 | None:intergenic | 40.0% |
| GAACTCACTTGCATATCACA+AGG | - | chr5_3:58746174-58746193 | None:intergenic | 40.0% | |
| ! | ATGACCAGAGTTTTCTGTTC+TGG | + | chr5_3:58746301-58746320 | Msa0821020:intron | 40.0% |
| CTTGATACAGACTCACTATC+GGG | - | chr5_3:58746567-58746586 | None:intergenic | 40.0% | |
| GCTTGATACAGACTCACTAT+CGG | - | chr5_3:58746568-58746587 | None:intergenic | 40.0% | |
| CTGGGGAATCTATAATACCA+AGG | - | chr5_3:58746679-58746698 | None:intergenic | 40.0% | |
| ACATGGGTAAACAAGACTCT+GGG | - | chr5_3:58746697-58746716 | None:intergenic | 40.0% | |
| TAGAAGATAACCGTGAGGAA+AGG | + | chr5_3:58746977-58746996 | Msa0821020:intron | 40.0% | |
| AATGAGCCCTTATACTTCTG+TGG | + | chr5_3:58747068-58747087 | Msa0821020:intron | 40.0% | |
| ATGAGCCCTTATACTTCTGT+GGG | + | chr5_3:58747069-58747088 | Msa0821020:intron | 40.0% | |
| ! | CCATTCCCACAGAAGTATAA+GGG | - | chr5_3:58747077-58747096 | None:intergenic | 40.0% |
| ! | TCCATTCCCACAGAAGTATA+AGG | - | chr5_3:58747078-58747097 | None:intergenic | 40.0% |
| CCCACATTGTAAACTATACC+TGG | + | chr5_3:58747281-58747300 | Msa0821020:intron | 40.0% | |
| CCCAGGTATAGTTTACAATG+TGG | - | chr5_3:58747237-58747256 | None:intergenic | 40.0% | |
| !! | TTACCAGTACTGATGTACCT+GGG | - | chr5_3:58747332-58747351 | None:intergenic | 40.0% |
| !! | ATTACCAGTACTGATGTACC+TGG | - | chr5_3:58747333-58747352 | None:intergenic | 40.0% |
| ! | GAATGCATTGGTGAAGTAGA+GGG | - | chr5_3:58747832-58747851 | None:intergenic | 40.0% |
| ! | AGAATGCATTGGTGAAGTAG+AGG | - | chr5_3:58747833-58747852 | None:intergenic | 40.0% |
| TCTAACAATGGTAGTTGGTC+TGG | + | chr5_3:58747934-58747953 | Msa0821020:CDS | 40.0% | |
| ! | CTAACAATGGTAGTTGGTCT+GGG | + | chr5_3:58747935-58747954 | Msa0821020:CDS | 40.0% |
| ! | TAACAATGGTAGTTGGTCTG+GGG | + | chr5_3:58747936-58747955 | Msa0821020:CDS | 40.0% |
| TTCTAATCCTCCTGTTAAGC+CGG | + | chr5_3:58747984-58748003 | Msa0821020:CDS | 40.0% | |
| ! | CCATGGGATTTTCTCATGAA+CGG | + | chr5_3:58748169-58748188 | Msa0821020:CDS | 40.0% |
| ! | CATGGGATTTTCTCATGAAC+GGG | + | chr5_3:58748170-58748189 | Msa0821020:CDS | 40.0% |
| !! | ATGGCACTGGTATTGAATGA+AGG | + | chr5_3:58748198-58748217 | Msa0821020:CDS | 40.0% |
| ! | CACTGGTATTGAATGAAGGT+AGG | + | chr5_3:58748202-58748221 | Msa0821020:CDS | 40.0% |
| GTTGCATGGCTATTTGAAAG+TGG | + | chr5_3:58748237-58748256 | Msa0821020:CDS | 40.0% | |
| GGATTGCAGACATGGAAATT+AGG | + | chr5_3:58748337-58748356 | Msa0821020:CDS | 40.0% | |
| GCAGACATGGAAATTAGGTA+TGG | + | chr5_3:58748342-58748361 | Msa0821020:CDS | 40.0% | |
| GTATGGATGTTCAAAACAGG+AGG | + | chr5_3:58748359-58748378 | Msa0821020:CDS | 40.0% | |
| GATCCTCCTATCATCAACAA+TGG | + | chr5_3:58748492-58748511 | Msa0821020:CDS | 40.0% | |
| ATCAACAATGGTAAGCAGTC+AGG | + | chr5_3:58748504-58748523 | Msa0821020:CDS | 40.0% | |
| !!! | CAGGTTTTGTTTGTGACCTT+GGG | - | chr5_3:58748545-58748564 | None:intergenic | 40.0% |
| !!! | ACAGGTTTTGTTTGTGACCT+TGG | - | chr5_3:58748546-58748565 | None:intergenic | 40.0% |
| !! | ATTCTGAGTTGGTTCAGAGA+AGG | - | chr5_3:58748570-58748589 | None:intergenic | 40.0% |
| TTAGGCAGCATTCTCTTTAG+AGG | - | chr5_3:58748672-58748691 | None:intergenic | 40.0% | |
| AATGCTGCCTAAGTCTGAAT+GGG | + | chr5_3:58748680-58748699 | Msa0821020:CDS | 40.0% | |
| GATAATATAGTGGCCTGTTG+TGG | - | chr5_3:58748711-58748730 | None:intergenic | 40.0% | |
| GCCAGTGAATAAGAAACAGA+AGG | - | chr5_3:58748765-58748784 | None:intergenic | 40.0% | |
| CATTACAACTATGGGTTCCT+TGG | - | chr5_3:58748880-58748899 | None:intergenic | 40.0% | |
| AACCCATAGTTGTAATGCAG+CGG | + | chr5_3:58748883-58748902 | Msa0821020:CDS | 40.0% | |
| CCTGCTTTGCATTTACAGTT+TGG | - | chr5_3:58748911-58748930 | None:intergenic | 40.0% | |
| CCAAACTGTAAATGCAAAGC+AGG | + | chr5_3:58748908-58748927 | Msa0821020:CDS | 40.0% | |
| AGGTGATGAACTATTGCTTG+AGG | - | chr5_3:58748940-58748959 | None:intergenic | 40.0% | |
| ACTGTTAGTTGGATACCAAC+TGG | - | chr5_3:58748976-58748995 | None:intergenic | 40.0% | |
| CTAACAGTGTAGAAGCTATG+AGG | + | chr5_3:58748988-58749007 | Msa0821020:CDS | 40.0% | |
| ! | TTTCTAGTACTAGGAGCTTG+AGG | - | chr5_3:58749029-58749048 | None:intergenic | 40.0% |
| !! | GGACTAGGATTTCTAGTACT+AGG | - | chr5_3:58749038-58749057 | None:intergenic | 40.0% |
| !! | GTTGGGGTTGATATTGAAGT+TGG | - | chr5_3:58749091-58749110 | None:intergenic | 40.0% |
| TTGATTACACCAGCATAGAC+TGG | + | chr5_3:58749312-58749331 | Msa0821020:CDS | 40.0% | |
| !! | ATAGACTGGTCTTTGGATAG+AGG | + | chr5_3:58749326-58749345 | Msa0821020:CDS | 40.0% |
| GATAGAGGTTTATCTTCACC+AGG | + | chr5_3:58749341-58749360 | Msa0821020:CDS | 40.0% | |
| ! | AACCATAAAGCATTTGACCC+TGG | - | chr5_3:58749362-58749381 | None:intergenic | 40.0% |
| GGGTCAAATGCTTTATGGTT+AGG | + | chr5_3:58749362-58749381 | Msa0821020:CDS | 40.0% | |
| TGAGCCCTACTCTTTGTAAA+AGG | - | chr5_3:58749395-58749414 | None:intergenic | 40.0% | |
| ATGAGATCATTGCCCTCAAA+TGG | + | chr5_3:58749461-58749480 | Msa0821020:CDS | 40.0% | |
| GAGAGCAATGAACCATTTGA+GGG | - | chr5_3:58749476-58749495 | None:intergenic | 40.0% | |
| TGAGAGCAATGAACCATTTG+AGG | - | chr5_3:58749477-58749496 | None:intergenic | 40.0% | |
| GGAGAAGAAACAAACTGTCT+CGG | - | chr5_3:58749620-58749639 | None:intergenic | 40.0% | |
| CTCCATCTCGGTAAAATGAT+AGG | + | chr5_3:58749636-58749655 | Msa0821020:exon | 40.0% | |
| ! | TCCCTATCATTTTACCGAGA+TGG | - | chr5_3:58749641-58749660 | None:intergenic | 40.0% |
| !! | TTGTTGGTGGTAAGTTTCAG+TGG | + | chr5_3:58749749-58749768 | Msa0821020:three_prime_UTR | 40.0% |
| !! | TGTTGGTGGTAAGTTTCAGT+GGG | + | chr5_3:58749750-58749769 | Msa0821020:three_prime_UTR | 40.0% |
| GCATGTGAGCGTAAATTTCT+TGG | - | chr5_3:58749788-58749807 | None:intergenic | 40.0% | |
| GCACGGACACTTCTTATCAA+AGG | - | chr5_3:58745558-58745577 | None:intergenic | 45.0% | |
| TTGAGTTACCCTGCAAGCTT+TGG | + | chr5_3:58745802-58745821 | Msa0821020:intron | 45.0% | |
| CTCAAAAGCCAAAGCTTGCA+GGG | - | chr5_3:58745813-58745832 | None:intergenic | 45.0% | |
| ACTCAAAAGCCAAAGCTTGC+AGG | - | chr5_3:58745814-58745833 | None:intergenic | 45.0% | |
| TTGAGTTACCCTGCAAGCTT+TGG | + | chr5_3:58745802-58745821 | Msa0821020:intron | 45.0% | |
| !!! | TCAGCTAGAATTTTGGGGTG+AGG | + | chr5_3:58745898-58745917 | Msa0821020:intron | 45.0% |
| !!! | CAGCTAGAATTTTGGGGTGA+GGG | + | chr5_3:58745899-58745918 | Msa0821020:intron | 45.0% |
| !!! | AGCTAGAATTTTGGGGTGAG+GGG | + | chr5_3:58745900-58745919 | Msa0821020:intron | 45.0% |
| CTGATATCAGCCAATGAAGC+AGG | + | chr5_3:58745931-58745950 | Msa0821020:intron | 45.0% | |
| ATCCCACGACATAACGACAT+GGG | - | chr5_3:58746216-58746235 | None:intergenic | 45.0% | |
| TATCCCACGACATAACGACA+TGG | - | chr5_3:58746217-58746236 | None:intergenic | 45.0% | |
| TGTCGTTATGTCGTGGGATA+AGG | + | chr5_3:58746217-58746236 | Msa0821020:intron | 45.0% | |
| ACAGCCAGAACAGAAAACTC+TGG | - | chr5_3:58746308-58746327 | None:intergenic | 45.0% | |
| GGCGACATCATTGGTAAAAG+AGG | + | chr5_3:58746340-58746359 | Msa0821020:intron | 45.0% | |
| ! | TTAAGGTGTAGGAGCATGAC+TGG | + | chr5_3:58746393-58746412 | Msa0821020:intron | 45.0% |
| ATGTAAGGGGGAGGAAATAC+GGG | - | chr5_3:58746427-58746446 | None:intergenic | 45.0% | |
| CATGTAAGGGGGAGGAAATA+CGG | - | chr5_3:58746428-58746447 | None:intergenic | 45.0% | |
| AGAGTAAACATGTAAGGGGG+AGG | - | chr5_3:58746436-58746455 | None:intergenic | 45.0% | |
| TCAATGTGGGAAAGTAGCAG+TGG | + | chr5_3:58746605-58746624 | Msa0821020:intron | 45.0% | |
| CATGGGTAAACAAGACTCTG+GGG | - | chr5_3:58746696-58746715 | None:intergenic | 45.0% | |
| CACATGGGTAAACAAGACTC+TGG | - | chr5_3:58746698-58746717 | None:intergenic | 45.0% | |
| CCCTTATACTTCTGTGGGAA+TGG | + | chr5_3:58747074-58747093 | Msa0821020:intron | 45.0% | |
| TTAGACTTAGATCGGGATGC+AGG | - | chr5_3:58747673-58747692 | None:intergenic | 45.0% | |
| TCGCTGATGTGTCCAAAGTA+TGG | - | chr5_3:58747807-58747826 | None:intergenic | 45.0% | |
| GATGAGACAGATGAACATCC+TGG | + | chr5_3:58747874-58747893 | Msa0821020:CDS | 45.0% | |
| GAGAAAACATCAACGGCAGA+AGG | + | chr5_3:58748062-58748081 | Msa0821020:CDS | 45.0% | |
| AACATCAACGGCAGAAGGAA+AGG | + | chr5_3:58748067-58748086 | Msa0821020:CDS | 45.0% | |
| CCGTTCATGAGAAAATCCCA+TGG | - | chr5_3:58748172-58748191 | None:intergenic | 45.0% | |
| TTCTCATGAACGGGCAACAA+TGG | + | chr5_3:58748179-58748198 | Msa0821020:CDS | 45.0% | |
| ! | GGTATTGAATGAAGGTAGGG+TGG | + | chr5_3:58748206-58748225 | Msa0821020:CDS | 45.0% |
| ATTGAATGAAGGTAGGGTGG+AGG | + | chr5_3:58748209-58748228 | Msa0821020:CDS | 45.0% | |
| TTTCAAACTGCCCTTACCTG+TGG | - | chr5_3:58748292-58748311 | None:intergenic | 45.0% | |
| ! | ACTTGCTAGGATTGCAGACA+TGG | + | chr5_3:58748329-58748348 | Msa0821020:CDS | 45.0% |
| AAGAGTCATCGTTTCCTGTG+AGG | + | chr5_3:58748386-58748405 | Msa0821020:CDS | 45.0% | |
| AGAGTCATCGTTTCCTGTGA+GGG | + | chr5_3:58748387-58748406 | Msa0821020:CDS | 45.0% | |
| !! | CTTTTCAAGATCACCCTCAC+AGG | - | chr5_3:58748403-58748422 | None:intergenic | 45.0% |
| CTGTGAGGGTGATCTTGAAA+AGG | + | chr5_3:58748401-58748420 | Msa0821020:CDS | 45.0% | |
| !! | GAGTTTCTAGTCAGAACCCA+AGG | + | chr5_3:58748526-58748545 | Msa0821020:CDS | 45.0% |
| ! | AGTTGGTTCAGAGAAGGAAC+AGG | - | chr5_3:58748564-58748583 | None:intergenic | 45.0% |
| GAATGCTGCCTAAGTCTGAA+TGG | + | chr5_3:58748679-58748698 | Msa0821020:CDS | 45.0% | |
| GGCTTTACCCATTCAGACTT+AGG | - | chr5_3:58748690-58748709 | None:intergenic | 45.0% | |
| TGAATGGGTAAAGCCACAAC+AGG | + | chr5_3:58748695-58748714 | Msa0821020:CDS | 45.0% | |
| TTATCTGACAAAAGGTGGCC+TGG | + | chr5_3:58748726-58748745 | Msa0821020:CDS | 45.0% | |
| TAACGAGCTTCAGTCTTAGC+AGG | - | chr5_3:58748813-58748832 | None:intergenic | 45.0% | |
| GAAGCTCGTTATGTGTCTGT+TGG | + | chr5_3:58748822-58748841 | Msa0821020:CDS | 45.0% | |
| GATGAACTATTGCTTGAGGC+TGG | - | chr5_3:58748936-58748955 | None:intergenic | 45.0% | |
| AGCAATAGTTCATCACCTCC+TGG | + | chr5_3:58748942-58748961 | Msa0821020:CDS | 45.0% | |
| CCAGCAACAAACTGTTGTTG+GGG | - | chr5_3:58749107-58749126 | None:intergenic | 45.0% | |
| GCCAGCAACAAACTGTTGTT+GGG | - | chr5_3:58749108-58749127 | None:intergenic | 45.0% | |
| TGCCAGCAACAAACTGTTGT+TGG | - | chr5_3:58749109-58749128 | None:intergenic | 45.0% | |
| ATCCTCAAGCAACCAATCGA+GGG | + | chr5_3:58749147-58749166 | Msa0821020:CDS | 45.0% | |
| GAATGGCAACTGGAATAGAG+CGG | + | chr5_3:58749169-58749188 | Msa0821020:CDS | 45.0% | |
| TCTTCTCTAGGTCTCTTTCC+AGG | + | chr5_3:58749221-58749240 | Msa0821020:CDS | 45.0% | |
| CTTCTCTAGGTCTCTTTCCA+GGG | + | chr5_3:58749222-58749241 | Msa0821020:CDS | 45.0% | |
| TAGGTCTCTTTCCAGGGAAA+GGG | + | chr5_3:58749228-58749247 | Msa0821020:CDS | 45.0% | |
| ATCCAAAGACCAGTCTATGC+TGG | - | chr5_3:58749324-58749343 | None:intergenic | 45.0% | |
| CACCAGGGTCAAATGCTTTA+TGG | + | chr5_3:58749357-58749376 | Msa0821020:CDS | 45.0% | |
| AAATGGTAGTACTGTCCCGA+TGG | + | chr5_3:58749496-58749515 | Msa0821020:CDS | 45.0% | |
| ! | GAGTGGAGTTCTCCTTTTGA+AGG | + | chr5_3:58749575-58749594 | Msa0821020:CDS | 45.0% |
| !!! | ATTGAATTATATTTTATATA+TGG | - | chr5_3:58746590-58746609 | None:intergenic | 5.0% |
| AGTGCCTGACACTAACGTGT+CGG | + | chr5_3:58745520-58745539 | Msa0821020:intron | 50.0% | |
| TGTCCCATGTCGTTATGTCG+TGG | + | chr5_3:58746210-58746229 | Msa0821020:intron | 50.0% | |
| GTCCCATGTCGTTATGTCGT+GGG | + | chr5_3:58746211-58746230 | Msa0821020:intron | 50.0% | |
| GTTCCCAGGTACATCAGTAC+TGG | + | chr5_3:58747326-58747345 | Msa0821020:intron | 50.0% | |
| GGCTAGCAAGGAAACTCCAA+AGG | + | chr5_3:58747702-58747721 | Msa0821020:CDS | 50.0% | |
| GTGGACTTTGCAGAAGCCTT+TGG | - | chr5_3:58747721-58747740 | None:intergenic | 50.0% | |
| AAGGCTTCTGCAAAGTCCAC+AGG | + | chr5_3:58747721-58747740 | Msa0821020:CDS | 50.0% | |
| TCTGCAAAGTCCACAGGATC+TGG | + | chr5_3:58747727-58747746 | Msa0821020:CDS | 50.0% | |
| !! | AGTGGATTGTATGCACTCGC+TGG | - | chr5_3:58747772-58747791 | None:intergenic | 50.0% |
| AGATGAACATCCTGGCAGCT+TGG | + | chr5_3:58747882-58747901 | Msa0821020:CDS | 50.0% | |
| ACTACTTCCGGCTTAACAGG+AGG | - | chr5_3:58747994-58748013 | None:intergenic | 50.0% | |
| GGAACTACTTCCGGCTTAAC+AGG | - | chr5_3:58747997-58748016 | None:intergenic | 50.0% | |
| GTTAAGCCGGAAGTAGTTCC+TGG | + | chr5_3:58747997-58748016 | Msa0821020:CDS | 50.0% | |
| TCAGCTCCAGGAACTACTTC+CGG | - | chr5_3:58748006-58748025 | None:intergenic | 50.0% | |
| CGCTTGTCATTATCAGCTCC+AGG | - | chr5_3:58748018-58748037 | None:intergenic | 50.0% | |
| GACACTTGCTCAACAGTTCG+TGG | + | chr5_3:58748146-58748165 | Msa0821020:CDS | 50.0% | |
| ! | GAAAGTGGTGACGAAGCAGA+TGG | + | chr5_3:58748252-58748271 | Msa0821020:CDS | 50.0% |
| GAAGGATTAGATCCTGCACC+AGG | - | chr5_3:58748747-58748766 | None:intergenic | 50.0% | |
| GCTCGTTATGTGTCTGTTGG+CGG | + | chr5_3:58748825-58748844 | Msa0821020:CDS | 50.0% | |
| GGCCGCTGCATTACAACTAT+GGG | - | chr5_3:58748888-58748907 | None:intergenic | 50.0% | |
| TACCAACTGGCAGACATTCC+AGG | - | chr5_3:58748963-58748982 | None:intergenic | 50.0% | |
| !! | CCCCAACAACAGTTTGTTGC+TGG | + | chr5_3:58749104-58749123 | Msa0821020:CDS | 50.0% |
| GATCCTCAAGCAACCAATCG+AGG | + | chr5_3:58749146-58749165 | Msa0821020:CDS | 50.0% | |
| ! | TTCCCTCGATTGGTTGCTTG+AGG | - | chr5_3:58749152-58749171 | None:intergenic | 50.0% |
| CAAGCAACCAATCGAGGGAA+TGG | + | chr5_3:58749152-58749171 | Msa0821020:CDS | 50.0% | |
| ! | CTTGCTGCTGCTTCTTCTCT+AGG | + | chr5_3:58749209-58749228 | Msa0821020:CDS | 50.0% |
| CTAGGTCTCTTTCCAGGGAA+AGG | + | chr5_3:58749227-58749246 | Msa0821020:CDS | 50.0% | |
| TCTCTTTCCAGGGAAAGGGT+CGG | + | chr5_3:58749232-58749251 | Msa0821020:CDS | 50.0% | |
| !! | CACCAGCATAGACTGGTCTT+TGG | + | chr5_3:58749319-58749338 | Msa0821020:CDS | 50.0% |
| CATCTTGCAATCCAGCCATC+GGG | - | chr5_3:58749514-58749533 | None:intergenic | 50.0% | |
| CCATCTTGCAATCCAGCCAT+CGG | - | chr5_3:58749515-58749534 | None:intergenic | 50.0% | |
| ATGGCTGGATTGCAAGATGG+CGG | + | chr5_3:58749515-58749534 | Msa0821020:CDS | 50.0% | |
| TCTGCTGAAACTTCTGCTGC+TGG | + | chr5_3:58749545-58749564 | Msa0821020:CDS | 50.0% | |
| !! | AAACTTCTGCTGCTGGTTCC+CGG | + | chr5_3:58749552-58749571 | Msa0821020:CDS | 50.0% |
| AAAAGGAGAACTCCACTCCC+GGG | - | chr5_3:58749573-58749592 | None:intergenic | 50.0% | |
| CAAAAGGAGAACTCCACTCC+CGG | - | chr5_3:58749574-58749593 | None:intergenic | 50.0% | |
| TGGTGGTAAGTTTCAGTGGG+AGG | + | chr5_3:58749753-58749772 | Msa0821020:three_prime_UTR | 50.0% | |
| GGTGGTAAGTTTCAGTGGGA+GGG | + | chr5_3:58749754-58749773 | Msa0821020:three_prime_UTR | 50.0% | |
| GTGGTAAGTTTCAGTGGGAG+GGG | + | chr5_3:58749755-58749774 | Msa0821020:three_prime_UTR | 50.0% | |
| GTGTCCGACACGTTAGTGTC+AGG | - | chr5_3:58745527-58745546 | None:intergenic | 55.0% | |
| GACACTAACGTGTCGGACAC+TGG | + | chr5_3:58745527-58745546 | Msa0821020:intron | 55.0% | |
| TGTTGCACTGCCAGATCCTG+TGG | - | chr5_3:58747740-58747759 | None:intergenic | 55.0% | |
| TGAACATCCTGGCAGCTTGG+TGG | + | chr5_3:58747885-58747904 | Msa0821020:CDS | 55.0% | |
| TGCTCAACAGTTCGTGGCCA+TGG | + | chr5_3:58748152-58748171 | Msa0821020:CDS | 55.0% | |
| GCTCAACAGTTCGTGGCCAT+GGG | + | chr5_3:58748153-58748172 | Msa0821020:CDS | 55.0% | |
| TGAACGGGCAACAATGGCAC+TGG | + | chr5_3:58748185-58748204 | Msa0821020:CDS | 55.0% | |
| GGGTGGAGGAATCAGTTGCA+TGG | + | chr5_3:58748223-58748242 | Msa0821020:CDS | 55.0% | |
| !! | TCTGGCTTTGGTGGAGCAGA+TGG | - | chr5_3:58748462-58748481 | None:intergenic | 55.0% |
| ATCTGCTCCACCAAAGCCAG+AGG | + | chr5_3:58748461-58748480 | Msa0821020:CDS | 55.0% | |
| !! | CCAGTTTCCTCTGGCTTTGG+TGG | - | chr5_3:58748471-58748490 | None:intergenic | 55.0% |
| CCACCAAAGCCAGAGGAAAC+TGG | + | chr5_3:58748468-58748487 | Msa0821020:CDS | 55.0% | |
| ! | TCGCCAGTTTCCTCTGGCTT+TGG | - | chr5_3:58748474-58748493 | None:intergenic | 55.0% |
| ! | ACTGGCTTCACCGTTGCAAG+TGG | + | chr5_3:58748779-58748798 | Msa0821020:CDS | 55.0% |
| GGTGGAAGAGCCACTTGCAA+CGG | - | chr5_3:58748792-58748811 | None:intergenic | 55.0% | |
| CGAGCTTCAGTCTTAGCAGG+TGG | - | chr5_3:58748810-58748829 | None:intergenic | 55.0% | |
| TCTTCAACCTGGAGCAGCCA+AGG | + | chr5_3:58748860-58748879 | Msa0821020:CDS | 55.0% | |
| GGGCCGCTGCATTACAACTA+TGG | - | chr5_3:58748889-58748908 | None:intergenic | 55.0% | |
| CAACTGGCAGACATTCCAGG+AGG | - | chr5_3:58748960-58748979 | None:intergenic | 55.0% | |
| CTCCTGGAATGTCTGCCAGT+TGG | + | chr5_3:58748958-58748977 | Msa0821020:CDS | 55.0% | |
| CCAGTTGCCATTCCCTCGAT+TGG | - | chr5_3:58749162-58749181 | None:intergenic | 55.0% | |
| CCAATCGAGGGAATGGCAAC+TGG | + | chr5_3:58749159-58749178 | Msa0821020:CDS | 55.0% | |
| TGGCAACTGGAATAGAGCGG+CGG | + | chr5_3:58749172-58749191 | Msa0821020:CDS | 55.0% | |
| GAAGAAGCAGCAGCAAGCGT+TGG | - | chr5_3:58749206-58749225 | None:intergenic | 55.0% | |
| !! | CACATCAGGGGCATCTTCTC+CGG | + | chr5_3:58749259-58749278 | Msa0821020:CDS | 55.0% |
| CCGATGGCTGGATTGCAAGA+TGG | + | chr5_3:58749512-58749531 | Msa0821020:CDS | 55.0% | |
| !! | AACTTCTGCTGCTGGTTCCC+GGG | + | chr5_3:58749553-58749572 | Msa0821020:CDS | 55.0% |
| GGATCTGGCAGTGCAACAGC+TGG | + | chr5_3:58747742-58747761 | Msa0821020:CDS | 60.0% | |
| GCAGAAGGAAAGGCGAGCAC+AGG | + | chr5_3:58748077-58748096 | Msa0821020:CDS | 60.0% | |
| ! | GGCTTTGGTGGAGCAGATGG+TGG | - | chr5_3:58748459-58748478 | None:intergenic | 60.0% |
| GGAGGATCGCCAGTTTCCTC+TGG | - | chr5_3:58748480-58748499 | None:intergenic | 60.0% | |
| GACAAAAGGTGGCCTGGTGC+AGG | + | chr5_3:58748732-58748751 | Msa0821020:CDS | 60.0% | |
| ATGGGTTCCTTGGCTGCTCC+AGG | - | chr5_3:58748870-58748889 | None:intergenic | 60.0% | |
| GGCAACTGGAATAGAGCGGC+GGG | + | chr5_3:58749173-58749192 | Msa0821020:CDS | 60.0% | |
| AAAGGGTCGGCAGCCACATC+AGG | + | chr5_3:58749245-58749264 | Msa0821020:CDS | 60.0% | |
| AAGGGTCGGCAGCCACATCA+GGG | + | chr5_3:58749246-58749265 | Msa0821020:CDS | 60.0% | |
| CGGAGAAGATGCCCCTGATG+TGG | - | chr5_3:58749261-58749280 | None:intergenic | 60.0% | |
| GGTAGTACTGTCCCGATGGC+TGG | + | chr5_3:58749500-58749519 | Msa0821020:CDS | 60.0% | |
| CCAGCTACCACCAAGCTGCC+AGG | - | chr5_3:58747895-58747914 | None:intergenic | 65.0% | |
| ! | CCTGGCAGCTTGGTGGTAGC+TGG | + | chr5_3:58747892-58747911 | Msa0821020:CDS | 65.0% |
| AGGGTCGGCAGCCACATCAG+GGG | + | chr5_3:58749247-58749266 | Msa0821020:CDS | 65.0% | |
| GGGCATCTTCTCCGGTCGAC+TGG | + | chr5_3:58749267-58749286 | Msa0821020:CDS | 65.0% | |
| TCTCCGGTCGACTGGAGCAC+TGG | + | chr5_3:58749275-58749294 | Msa0821020:CDS | 65.0% | |
| GAGCACAGGAGCTGCGCGAG+CGG | + | chr5_3:58748091-58748110 | Msa0821020:CDS | 70.0% | |
| GTGGCTGCCGACCCTTTCCC+TGG | - | chr5_3:58749242-58749261 | None:intergenic | 70.0% | |
| CCGCCAGTGCTCCAGTCGAC+CGG | - | chr5_3:58749281-58749300 | None:intergenic | 70.0% | |
| !! | CCGGTCGACTGGAGCACTGG+CGG | + | chr5_3:58749278-58749297 | Msa0821020:CDS | 70.0% |
| !! | CGGTCGACTGGAGCACTGGC+GGG | + | chr5_3:58749279-58749298 | Msa0821020:CDS | 70.0% |
| !! | CTGCTGCTGGTTCCCGGGAG+TGG | + | chr5_3:58749558-58749577 | Msa0821020:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 58745326 | 58749859 | 58745326 | ID=Msa0821020;Name=Msa0821020 |
| chr5_3 | mRNA | 58745326 | 58749859 | 58745326 | ID=Msa0821020-mRNA-1;Parent=Msa0821020;Name=Msa0821020-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0.25|0.25|1|1|4|210|676 |
| chr5_3 | exon | 58745326 | 58745331 | 58745326 | ID=Msa0821020-mRNA-1:exon:17843;Parent=Msa0821020-mRNA-1 |
| chr5_3 | exon | 58746404 | 58746426 | 58746404 | ID=Msa0821020-mRNA-1:exon:17844;Parent=Msa0821020-mRNA-1 |
| chr5_3 | exon | 58747408 | 58747413 | 58747408 | ID=Msa0821020-mRNA-1:exon:17845;Parent=Msa0821020-mRNA-1 |
| chr5_3 | exon | 58747654 | 58749859 | 58747654 | ID=Msa0821020-mRNA-1:exon:17846;Parent=Msa0821020-mRNA-1 |
| chr5_3 | CDS | 58745326 | 58745331 | 58745326 | ID=Msa0821020-mRNA-1:cds;Parent=Msa0821020-mRNA-1 |
| chr5_3 | CDS | 58746404 | 58746426 | 58746404 | ID=Msa0821020-mRNA-1:cds;Parent=Msa0821020-mRNA-1 |
| chr5_3 | CDS | 58747408 | 58747413 | 58747408 | ID=Msa0821020-mRNA-1:cds;Parent=Msa0821020-mRNA-1 |
| chr5_3 | CDS | 58747654 | 58749649 | 58747654 | ID=Msa0821020-mRNA-1:cds;Parent=Msa0821020-mRNA-1 |
| chr5_3 | three_prime_UTR | 58749650 | 58749859 | 58749650 | ID=Msa0821020-mRNA-1:three_prime_utr;Parent=Msa0821020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
