AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0823580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0823580 MtrunA17_Chr5g0444311 84.823 481 45 3 17 490 1 460 0.0 763
Msa0823580 MtrunA17_Chr8g0362521 61.758 455 150 6 35 486 15 448 3.65e-178 509
Msa0823580 MtrunA17_Chr8g0362461 56.596 470 139 12 30 489 4 418 3.82e-156 451
Msa0823580 MtrunA17_Chr8g0362021 53.700 473 182 9 25 489 9 452 7.56e-155 449
Msa0823580 MtrunA17_Chr2g0319941 50.644 466 193 10 33 489 19 456 4.98e-130 386
Msa0823580 MtrunA17_Chr8g0360061 48.682 493 190 15 30 489 14 476 1.11e-127 381
Msa0823580 MtrunA17_Chr8g0362491 46.612 487 209 14 20 489 10 462 7.52e-127 378
Msa0823580 MtrunA17_Chr8g0363951 64.552 268 89 3 225 489 1 265 1.35e-110 329
Msa0823580 MtrunA17_Chr4g0014361 51.899 316 122 6 194 489 4 309 1.79e-89 277
Msa0823580 MtrunA17_Chr8g0362591 39.662 474 237 12 35 489 7 450 3.95e-86 273
Msa0823580 MtrunA17_Chr8g0360071 39.959 488 241 13 21 489 1 455 4.22e-82 263
Msa0823580 MtrunA17_Chr4g0025351 38.934 488 248 13 26 489 12 473 5.06e-82 263
Msa0823580 MtrunA17_Chr8g0358771 44.504 373 168 13 121 484 3 345 6.31e-78 248
Msa0823580 MtrunA17_Chr8g0369261 38.413 479 239 15 21 489 1 433 1.77e-76 248
Msa0823580 MtrunA17_Chr8g0363981 35.378 489 246 14 8 489 2 427 3.69e-69 228
Msa0823580 MtrunA17_Chr8g0363821 35.152 495 244 16 8 483 2 438 1.33e-66 222
Msa0823580 MtrunA17_Chr8g0363971 32.530 498 272 14 22 489 13 476 8.95e-59 202
Msa0823580 MtrunA17_Chr8g0340591 45.725 269 130 9 227 490 9 266 4.16e-57 191
Msa0823580 MtrunA17_Chr8g0363941 57.310 171 66 3 32 196 13 182 5.22e-56 185
Msa0823580 MtrunA17_Chr4g0011341 43.098 297 147 12 202 490 23 305 3.83e-54 185
Msa0823580 MtrunA17_Chr4g0014371 53.333 165 64 4 21 178 1 159 1.32e-49 167
Msa0823580 MtrunA17_Chr8g0362001 38.835 309 144 12 34 333 83 355 5.78e-43 156
Msa0823580 MtrunA17_Chr4g0011381 42.324 241 129 6 233 471 2 234 4.21e-42 150
Msa0823580 MtrunA17_Chr8g0373051 38.281 256 123 10 25 273 2 229 1.27e-34 134
Msa0823580 MtrunA17_Chr8g0373051 35.185 270 150 11 228 489 125 377 3.97e-24 104
Msa0823580 MtrunA17_Chr5g0405101 47.134 157 74 6 28 179 12 164 9.31e-34 126
Msa0823580 MtrunA17_Chr5g0435741 29.957 464 267 20 31 482 29 446 5.01e-32 128
Msa0823580 MtrunA17_Chr5g0438191 29.935 461 264 18 31 482 9 419 1.07e-31 127
Msa0823580 MtrunA17_Chr8g0363801 47.222 144 73 2 35 178 9 149 1.15e-31 119
Msa0823580 MtrunA17_Chr5g0405111 42.935 184 92 4 222 394 3 184 1.30e-30 118
Msa0823580 MtrunA17_Chr5g0405111 46.914 81 40 2 405 483 131 210 1.65e-11 63.9
Msa0823580 MtrunA17_Chr8g0340581 45.455 165 77 7 35 192 16 174 1.74e-30 117
Msa0823580 MtrunA17_Chr8g0363791 33.835 266 157 6 236 495 15 267 2.17e-30 119
Msa0823580 MtrunA17_Chr2g0278121 26.793 474 262 14 28 484 9 414 5.12e-29 119
Msa0823580 MtrunA17_Chr8g0340611 44.079 152 74 6 35 177 10 159 7.18e-29 112
Msa0823580 MtrunA17_Chr8g0340521 44.242 165 79 6 18 178 32 187 1.10e-28 112
Msa0823580 MtrunA17_Chr8g0356821 50.000 146 63 6 233 372 1 142 2.01e-28 110
Msa0823580 MtrunA17_Chr7g0246351 25.966 466 246 17 35 484 6 388 6.24e-28 115
Msa0823580 MtrunA17_Chr4g0011351 39.594 197 89 8 22 197 4 191 1.48e-27 110
Msa0823580 MtrunA17_Chr3g0137721 27.368 475 243 16 27 484 3 392 4.42e-27 113
Msa0823580 MtrunA17_Chr6g0458601 26.154 455 244 15 10 461 42 407 1.14e-26 112
Msa0823580 MtrunA17_Chr6g0465671 26.987 478 235 17 30 492 3 381 3.85e-26 110
Msa0823580 MtrunA17_Chr6g0466481 26.987 478 235 17 30 492 3 381 4.03e-26 110
Msa0823580 MtrunA17_Chr7g0224001 25.910 467 234 18 35 482 14 387 1.07e-23 103
Msa0823580 MtrunA17_Chr1g0166251 25.431 464 250 17 34 489 10 385 1.98e-23 102
Msa0823580 MtrunA17_Chr5g0423901 26.809 470 242 17 34 492 8 386 3.37e-23 101
Msa0823580 MtrunA17_Chr7g0227851 26.907 472 230 22 33 489 9 380 5.72e-23 100
Msa0823580 MtrunA17_Chr3g0138371 26.545 437 220 17 32 462 17 358 7.39e-23 100
Msa0823580 MtrunA17_Chr5g0419701 26.464 461 241 17 36 482 5 381 1.43e-22 99.8
Msa0823580 MtrunA17_Chr2g0278791 25.210 476 232 19 34 488 1 373 1.59e-22 99.8
Msa0823580 MtrunA17_Chr3g0138571 27.438 441 210 17 35 462 13 356 3.57e-22 98.6
Msa0823580 MtrunA17_Chr3g0114151 24.945 457 257 16 34 482 23 401 2.01e-21 96.7
Msa0823580 MtrunA17_Chr7g0262091 25.745 470 229 21 34 484 17 385 2.70e-21 95.9
Msa0823580 MtrunA17_Chr1g0208801 27.500 440 212 19 34 460 7 352 2.79e-21 95.9
Msa0823580 MtrunA17_Chr6g0465731 26.964 471 226 20 30 482 3 373 4.20e-21 95.1
Msa0823580 MtrunA17_Chr3g0137681 26.458 480 223 20 27 482 2 375 1.11e-20 94.0
Msa0823580 MtrunA17_Chr3g0137701 25.170 441 234 15 33 460 7 364 1.13e-20 94.4
Msa0823580 MtrunA17_Chr4g0027431 27.376 442 258 20 31 452 5 403 2.14e-20 94.0
Msa0823580 MtrunA17_Chr2g0321161 38.776 147 81 4 344 487 10 150 2.75e-20 87.8
Msa0823580 MtrunA17_Chr4g0027471 27.176 471 248 21 31 445 5 436 3.28e-20 93.2
Msa0823580 MtrunA17_Chr2g0297931 24.524 473 266 18 23 484 2 394 5.01e-20 92.4
Msa0823580 MtrunA17_Chr4g0041631 26.593 455 269 17 32 461 18 432 7.40e-20 92.8
Msa0823580 MtrunA17_Chr4g0063321 37.500 216 104 10 95 303 6 197 8.14e-20 87.8
Msa0823580 MtrunA17_Chr1g0193401 26.596 470 239 20 35 489 179 557 3.67e-19 90.9
Msa0823580 MtrunA17_Chr4g0027441 28.043 460 254 21 28 460 2 411 1.18e-18 88.6
Msa0823580 MtrunA17_Chr4g0041581 26.941 438 267 17 35 460 23 419 1.82e-18 88.2
Msa0823580 MtrunA17_Chr5g0395311 24.837 459 246 18 37 482 28 400 2.12e-18 87.8
Msa0823580 MtrunA17_Chr7g0262121 24.268 478 260 16 17 484 2 387 2.59e-18 87.0
Msa0823580 MtrunA17_Chr1g0181601 26.609 466 232 21 34 482 7 379 4.27e-18 86.3
Msa0823580 MtrunA17_Chr3g0093361 24.123 456 241 15 35 485 43 398 5.37e-18 86.3
Msa0823580 MtrunA17_Chr3g0139601 26.139 505 271 18 35 484 13 470 1.25e-17 85.5
Msa0823580 MtrunA17_Chr5g0423851 26.623 462 225 17 34 482 7 367 1.57e-17 84.3
Msa0823580 MtrunA17_Chr3g0096461 26.283 487 284 16 31 485 19 462 2.27e-17 84.7
Msa0823580 MtrunA17_Chr7g0231691 31.599 269 160 8 212 464 144 404 4.37e-17 83.6
Msa0823580 MtrunA17_Chr6g0471031 23.624 436 242 14 34 460 60 413 5.10e-17 83.6
Msa0823580 MtrunA17_Chr5g0431691 25.057 435 231 16 32 460 2 347 1.91e-16 81.3
Msa0823580 MtrunA17_Chr7g0226481 28.571 266 135 10 34 295 10 224 8.80e-16 79.0
Msa0823580 MtrunA17_Chr3g0086041 25.112 446 232 18 24 462 15 365 1.76e-15 78.6
Msa0823580 MtrunA17_Chr8g0358761 57.377 61 25 1 24 84 2 61 3.45e-15 70.5
Msa0823580 MtrunA17_Chr2g0314171 26.096 456 259 18 30 458 36 440 1.16e-14 76.3
Msa0823580 MtrunA17_Chr4g0027461 26.816 358 183 15 31 347 5 324 1.32e-14 75.1
Msa0823580 MtrunA17_Chr2g0277281 29.204 226 123 7 34 249 10 208 1.41e-14 75.9
Msa0823580 MtrunA17_Chr3g0107721 23.840 474 290 16 35 495 3 418 2.62e-14 75.1
Msa0823580 MtrunA17_Chr4g0041601 25.870 460 269 20 32 461 18 435 3.64e-14 75.1
Msa0823580 MtrunA17_Chr2g0321151 40.164 122 56 4 63 178 3 113 3.97e-14 70.5
Msa0823580 MtrunA17_Chr7g0238361 25.055 451 256 17 35 478 3 378 4.27e-14 74.3
Msa0823580 MtrunA17_Chr2g0278801 27.083 288 135 11 34 297 1 237 5.71e-14 72.0
Msa0823580 MtrunA17_Chr7g0236211 31.169 231 122 10 25 251 2 199 7.28e-14 73.6
Msa0823580 MtrunA17_Chr5g0438051 29.694 229 122 7 35 249 6 209 7.55e-14 73.6
Msa0823580 MtrunA17_Chr6g0458501 25.503 447 224 17 22 460 30 375 8.22e-14 73.6
Msa0823580 MtrunA17_Chr4g0027231 26.763 482 262 24 31 460 96 538 1.83e-13 73.2
Msa0823580 MtrunA17_Chr7g0227771 27.468 233 135 7 35 266 4 203 3.91e-13 68.6
Msa0823580 MtrunA17_Chr8g0340531 43.200 125 63 5 232 352 5 125 6.92e-13 66.2
Msa0823580 MtrunA17_Chr7g0227651 30.455 220 117 8 34 249 10 197 7.55e-13 70.1
Msa0823580 MtrunA17_Chr2g0303231 25.212 472 241 20 13 461 3 385 9.17e-13 70.1
Msa0823580 MtrunA17_Chr7g0222771 26.316 342 174 11 32 343 21 314 9.69e-13 69.7
Msa0823580 MtrunA17_Chr7g0235821 23.043 460 248 16 35 484 5 368 1.63e-12 69.3
Msa0823580 MtrunA17_Chr7g0231671 25.339 442 278 17 35 460 19 424 2.65e-12 68.9
Msa0823580 MtrunA17_Chr7g0227821 29.680 219 117 9 33 247 9 194 2.89e-12 66.6
Msa0823580 MtrunA17_Chr5g0396411 22.912 467 267 17 37 485 1 392 2.90e-12 68.6
Msa0823580 MtrunA17_Chr6g0467501 31.197 234 120 10 34 248 210 421 3.21e-12 68.9
Msa0823580 MtrunA17_Chr1g0154471 26.052 499 259 24 13 483 2 418 3.71e-12 68.6
Msa0823580 MtrunA17_Chr2g0303241 27.206 272 147 10 13 275 3 232 4.21e-12 68.2
Msa0823580 MtrunA17_Chr2g0325431 24.736 473 277 19 31 483 15 428 4.50e-12 68.2
Msa0823580 MtrunA17_Chr4g0023311 22.782 496 317 18 16 460 6 486 5.18e-12 68.2
Msa0823580 MtrunA17_Chr8g0340571 44.444 81 42 2 400 478 14 93 5.74e-12 62.4
Msa0823580 MtrunA17_Chr5g0399361 28.788 198 110 8 302 476 27 216 6.72e-12 65.5
Msa0823580 MtrunA17_Chr3g0091171 25.116 215 128 6 35 247 5 188 7.10e-12 67.0
Msa0823580 MtrunA17_Chr7g0251931 31.481 162 92 5 335 489 45 194 1.42e-11 63.9
Msa0823580 MtrunA17_Chr5g0420741 30.047 213 114 7 37 247 20 199 2.86e-11 64.3
Msa0823580 MtrunA17_Chr8g0340541 43.478 69 37 1 418 484 30 98 3.57e-11 60.1
Msa0823580 MtrunA17_Chr3g0080241 35.043 117 67 4 360 474 12 121 4.37e-11 61.2
Msa0823580 MtrunA17_Chr4g0023251 28.829 222 124 9 34 249 1 194 5.19e-11 63.9
Msa0823580 MtrunA17_Chr1g0181881 27.711 166 95 6 17 177 1 146 8.85e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0823580 AT4G26340.1 28.266 467 265 20 34 484 1 413 1.08e-29 121
Msa0823580 AT5G56440.1 28.448 464 264 17 34 478 1 415 2.60e-29 120
Msa0823580 AT1G16930.2 27.790 457 255 17 35 462 15 425 1.24e-28 119
Msa0823580 AT1G16930.1 27.790 457 255 17 35 462 15 425 1.24e-28 119
Msa0823580 AT1G16930.3 27.790 457 255 17 35 462 15 425 1.24e-28 119
Msa0823580 AT5G60610.2 28.409 440 248 18 34 460 1 386 2.67e-28 117
Msa0823580 AT5G60610.1 28.409 440 248 18 34 460 1 386 2.67e-28 117
Msa0823580 AT5G53635.1 26.293 464 279 14 37 483 2 419 3.24e-28 117
Msa0823580 AT5G53840.1 26.846 447 272 16 24 461 7 407 5.35e-28 117
Msa0823580 AT4G00160.1 29.837 429 242 21 35 452 16 396 2.02e-27 115
Msa0823580 AT5G56420.1 25.751 466 275 17 35 484 6 416 5.21e-27 113
Msa0823580 AT5G56420.2 25.751 466 275 17 35 484 6 416 5.21e-27 113
Msa0823580 AT5G56420.3 25.751 466 275 17 35 484 6 416 5.21e-27 113
Msa0823580 AT5G44950.1 27.938 451 247 21 35 458 4 403 6.04e-27 113
Msa0823580 AT4G13965.1 30.652 460 255 20 33 481 8 414 1.51e-26 112
Msa0823580 AT1G51370.1 26.293 464 279 18 35 486 19 431 2.80e-26 111
Msa0823580 AT2G04230.1 27.682 466 274 16 29 480 7 423 3.63e-26 111
Msa0823580 AT5G22700.2 26.087 460 265 15 35 468 6 416 3.76e-26 111
Msa0823580 AT5G22700.3 26.087 460 265 15 35 468 6 416 3.76e-26 111
Msa0823580 AT5G22700.1 26.087 460 265 15 35 468 6 416 3.76e-26 111
Msa0823580 AT5G22700.4 26.087 460 265 15 35 468 6 416 3.76e-26 111
Msa0823580 AT5G22700.5 26.087 460 265 15 35 468 43 453 5.60e-26 111
Msa0823580 AT1G66310.1 26.022 465 271 15 17 460 1 413 5.73e-26 110
Msa0823580 AT1G13780.1 27.594 453 257 16 35 458 10 420 1.17e-25 110
Msa0823580 AT1G69630.1 26.501 483 273 20 32 484 15 445 1.22e-24 107
Msa0823580 AT2G26030.3 26.763 482 271 22 35 484 4 435 1.33e-24 107
Msa0823580 AT2G26030.1 26.763 482 271 22 35 484 4 435 1.33e-24 107
Msa0823580 AT4G00315.1 25.813 461 290 16 34 476 1 427 1.42e-24 106
Msa0823580 AT5G56560.2 26.940 464 263 16 36 482 6 410 1.91e-24 106
Msa0823580 AT1G78750.2 26.569 478 284 16 33 484 16 452 2.38e-24 106
Msa0823580 AT1G78750.1 26.569 478 284 16 33 484 16 452 2.38e-24 106
Msa0823580 AT2G26030.4 26.195 481 280 20 35 484 4 440 2.51e-24 106
Msa0823580 AT2G26860.1 27.376 442 268 19 34 464 1 400 3.78e-24 105
Msa0823580 AT2G26860.2 27.376 442 268 19 34 464 1 400 3.78e-24 105
Msa0823580 AT5G22730.1 26.453 499 288 21 17 484 10 460 4.96e-24 105
Msa0823580 AT5G22730.3 26.453 499 288 21 17 484 10 460 4.96e-24 105
Msa0823580 AT5G27750.1 26.535 456 269 15 35 460 5 424 6.36e-24 105
Msa0823580 AT3G49030.1 28.358 469 259 22 35 482 21 433 1.75e-23 103
Msa0823580 AT5G56400.1 28.635 447 262 15 33 470 31 429 2.20e-23 103
Msa0823580 AT4G13985.1 25.000 492 306 21 17 484 1 453 2.76e-23 103
Msa0823580 AT5G22670.1 24.842 475 283 13 35 484 11 436 2.99e-23 102
Msa0823580 AT5G22660.2 25.771 454 249 17 35 456 13 410 4.81e-23 102
Msa0823580 AT5G56820.1 28.929 439 243 18 35 464 15 393 1.14e-22 100
Msa0823580 AT5G22610.2 25.462 487 280 18 35 483 18 459 1.36e-22 101
Msa0823580 AT1G55660.1 25.163 461 293 15 34 476 52 478 2.04e-22 100
Msa0823580 AT1G22000.1 25.338 517 285 19 12 493 5 455 2.53e-22 100
Msa0823580 AT1G66300.1 26.222 450 261 18 33 460 27 427 2.60e-22 100
Msa0823580 AT5G56380.2 26.708 483 272 22 34 484 1 433 4.49e-22 99.4
Msa0823580 AT5G56380.1 26.708 483 272 22 34 484 1 433 4.49e-22 99.4
Msa0823580 AT1G51370.3 26.683 416 244 16 35 440 19 383 4.97e-22 99.0
Msa0823580 AT3G59200.2 29.897 388 212 15 35 394 7 362 9.34e-22 97.4
Msa0823580 AT1G78760.1 24.335 489 297 19 17 484 1 437 1.04e-21 98.2
Msa0823580 AT3G50710.1 26.271 472 276 23 34 484 1 421 1.08e-21 98.2
Msa0823580 AT5G44980.2 26.222 450 264 19 33 461 2 404 1.22e-21 97.8
Msa0823580 AT5G44980.1 26.222 450 264 19 33 461 2 404 1.22e-21 97.8
Msa0823580 AT5G22720.1 26.535 456 255 18 35 458 23 430 1.26e-21 98.2
Msa0823580 AT5G22610.1 25.316 474 267 18 35 483 18 429 2.02e-21 97.8
Msa0823580 AT3G52680.1 27.840 449 255 18 35 468 21 415 2.18e-21 97.4
Msa0823580 AT5G22700.6 24.499 449 245 14 35 468 43 412 3.23e-21 96.7
Msa0823580 AT3G58900.4 26.030 461 269 17 34 460 1 423 4.76e-21 96.7
Msa0823580 AT3G59200.1 29.897 388 212 15 35 394 7 362 5.67e-21 96.7
Msa0823580 AT3G49030.2 27.511 458 251 20 35 482 21 407 6.35e-21 95.5
Msa0823580 AT5G38570.1 25.217 460 245 16 34 484 1 370 1.32e-20 94.4
Msa0823580 AT1G13780.2 28.045 353 191 13 35 359 10 327 2.09e-20 92.8
Msa0823580 AT3G44810.1 30.792 341 201 10 37 368 9 323 2.09e-20 94.4
Msa0823580 AT5G44960.1 23.702 443 267 14 32 461 2 386 2.20e-20 94.0
Msa0823580 AT1G80470.1 25.519 482 286 22 21 482 1 429 2.41e-20 94.4
Msa0823580 AT5G38590.2 25.272 459 289 15 34 487 1 410 2.42e-20 94.0
Msa0823580 AT1G32375.2 24.786 468 293 16 34 489 1 421 4.59e-20 93.2
Msa0823580 AT1G32375.1 24.786 468 293 16 34 489 1 421 4.59e-20 93.2
Msa0823580 AT5G27750.2 26.735 389 226 12 35 394 5 363 8.91e-20 91.7
Msa0823580 AT3G49020.1 26.483 472 287 17 32 490 19 443 1.04e-19 92.4
Msa0823580 AT5G56370.1 26.244 442 254 17 34 464 1 381 1.86e-19 91.3
Msa0823580 AT5G56370.2 26.244 442 254 17 34 464 1 381 1.86e-19 91.3
Msa0823580 AT3G58980.1 27.273 484 269 21 34 483 1 435 2.04e-19 92.0
Msa0823580 AT3G59240.1 27.328 494 284 23 32 487 2 458 3.50e-19 90.9
Msa0823580 AT3G42770.1 26.407 462 279 16 37 482 1 417 6.08e-19 90.5
Msa0823580 AT5G56690.1 26.316 437 268 18 37 460 4 399 9.52e-19 89.0
Msa0823580 AT1G05080.1 25.427 468 284 18 35 484 13 433 1.55e-18 88.6
Msa0823580 AT3G60040.4 25.916 382 231 12 35 395 13 363 2.65e-18 88.6
Msa0823580 AT3G58860.1 25.161 465 294 17 30 477 2 429 2.77e-18 87.8
Msa0823580 AT5G56700.2 25.474 369 228 12 103 462 22 352 3.26e-18 86.7
Msa0823580 AT5G56810.1 27.495 491 277 21 23 492 2 434 3.79e-18 87.4
Msa0823580 AT1G78730.1 23.200 500 266 19 17 484 1 414 4.27e-18 87.0
Msa0823580 AT3G60040.1 25.570 395 242 12 35 408 232 595 4.69e-18 88.2
Msa0823580 AT5G41840.1 26.515 396 229 14 35 394 14 383 5.01e-18 87.8
Msa0823580 AT3G60040.3 25.570 395 242 12 35 408 233 596 5.03e-18 88.2
Msa0823580 AT3G60040.5 25.984 381 230 12 35 394 230 579 5.70e-18 87.8
Msa0823580 AT3G60040.2 25.984 381 230 12 35 394 232 581 6.08e-18 87.8
Msa0823580 AT3G51530.1 26.222 450 269 17 20 456 12 411 6.33e-18 87.0
Msa0823580 AT4G15060.2 26.147 436 247 19 14 430 5 384 7.53e-18 86.3
Msa0823580 AT5G18780.2 25.696 467 286 17 35 483 11 434 1.31e-17 85.9
Msa0823580 AT5G18780.1 25.696 467 286 17 35 483 11 434 1.31e-17 85.9
Msa0823580 AT5G56390.1 25.219 456 292 14 34 482 1 414 1.32e-17 85.5
Msa0823580 AT1G51370.2 25.526 380 220 15 35 403 19 346 2.18e-17 84.0
Msa0823580 AT4G10420.1 26.946 334 202 12 162 490 26 322 2.20e-17 83.6
Msa0823580 AT1G66290.1 24.370 476 283 20 32 484 26 447 4.49e-17 84.3
Msa0823580 AT5G18770.1 26.458 480 284 22 35 489 24 459 5.67e-17 84.0
Msa0823580 AT4G09920.1 25.157 318 192 11 34 345 1 278 6.00e-17 82.4
Msa0823580 AT4G09920.5 25.157 318 192 11 34 345 1 278 6.00e-17 82.4
Msa0823580 AT4G09920.2 25.157 318 192 11 34 345 1 278 1.29e-16 80.9
Msa0823580 AT4G09920.4 25.157 318 192 11 34 345 1 278 1.29e-16 80.9
Msa0823580 AT4G09920.3 25.157 318 192 11 34 345 1 278 1.29e-16 80.9
Msa0823580 AT5G62970.1 24.839 467 277 19 34 468 1 425 1.79e-16 82.4
Msa0823580 AT3G44060.1 24.138 464 291 15 37 483 1 420 2.20e-16 82.0
Msa0823580 AT3G58880.1 26.339 448 277 14 34 460 2 417 2.27e-16 82.0
Msa0823580 AT3G58900.2 28.428 299 166 11 34 319 1 264 2.81e-16 80.5
Msa0823580 AT3G58900.1 28.428 299 166 11 34 319 1 264 2.81e-16 80.5
Msa0823580 AT3G58900.3 28.428 299 166 11 34 319 1 264 3.54e-16 80.1
Msa0823580 AT1G55660.2 28.302 265 157 9 34 294 52 287 4.59e-16 80.5
Msa0823580 AT4G14103.3 31.379 290 158 15 35 316 8 264 5.92e-16 80.1
Msa0823580 AT4G14103.1 31.379 290 158 15 35 316 8 264 5.92e-16 80.1
Msa0823580 AT4G14103.2 31.379 290 158 15 35 316 8 264 8.47e-16 80.1
Msa0823580 AT4G15060.1 27.829 327 180 14 33 343 170 456 1.06e-15 80.5
Msa0823580 AT1G55030.2 27.918 437 240 19 35 456 19 395 1.22e-15 79.7
Msa0823580 AT1G55030.1 27.918 437 240 19 35 456 9 385 1.28e-15 79.3
Msa0823580 AT1G66320.1 24.183 459 273 15 23 458 18 424 1.41e-15 79.7
Msa0823580 AT3G26922.1 28.527 319 172 13 35 343 14 286 1.43e-15 78.2
Msa0823580 AT3G26922.2 28.527 319 172 13 35 343 14 286 1.43e-15 78.2
Msa0823580 AT1G16940.1 24.183 459 271 17 37 482 13 407 2.36e-15 79.0
Msa0823580 AT3G58920.1 26.813 455 252 21 34 443 1 419 4.44e-15 78.2
Msa0823580 AT5G56560.1 29.720 286 160 10 214 482 338 599 4.54e-15 78.6
Msa0823580 AT4G26350.1 25.390 449 252 19 34 456 1 392 6.50e-15 77.4
Msa0823580 AT5G25850.1 26.042 480 254 17 34 459 19 451 7.13e-15 77.4
Msa0823580 AT5G38590.1 25.868 317 188 12 34 345 1 275 7.52e-15 75.5
Msa0823580 AT5G22730.2 26.895 409 224 20 17 394 10 374 1.00e-14 76.6
Msa0823580 AT3G52680.2 30.282 284 152 12 17 290 1 248 1.45e-14 75.9
Msa0823580 AT3G49480.2 23.958 480 285 19 35 486 12 439 1.49e-14 76.3
Msa0823580 AT4G14096.2 26.972 393 209 17 35 416 8 333 1.72e-14 76.3
Msa0823580 AT4G14096.1 26.972 393 209 17 35 416 8 333 1.72e-14 76.3
Msa0823580 AT5G18770.2 27.128 376 218 16 35 391 24 362 3.44e-14 74.7
Msa0823580 AT3G58940.1 25.169 445 272 14 34 460 1 402 3.93e-14 75.5
Msa0823580 AT3G58940.2 25.169 445 272 14 34 460 1 402 3.93e-14 75.5
Msa0823580 AT3G26930.2 28.995 438 238 20 35 456 21 401 4.50e-14 75.1
Msa0823580 AT5G18780.3 26.343 391 232 15 35 411 11 359 5.67e-14 73.9
Msa0823580 AT5G18780.4 26.343 391 232 15 35 411 11 359 5.67e-14 73.9
Msa0823580 AT5G02700.1 26.650 409 226 17 32 418 24 380 5.76e-14 74.7
Msa0823580 AT3G58930.3 23.043 460 294 13 34 460 1 433 6.22e-14 74.7
Msa0823580 AT3G58930.1 23.043 460 294 13 34 460 1 433 6.22e-14 74.7
Msa0823580 AT3G58930.5 23.043 460 294 13 34 460 1 433 6.22e-14 74.7
Msa0823580 AT3G56780.2 23.552 518 267 19 37 484 9 467 1.09e-13 73.9
Msa0823580 AT3G59210.2 28.678 401 226 19 30 405 2 367 1.15e-13 73.9
Msa0823580 AT3G59210.1 28.678 401 226 19 30 405 2 367 1.15e-13 73.9
Msa0823580 AT3G59210.5 28.678 401 226 19 30 405 2 367 1.15e-13 73.9
Msa0823580 AT3G59210.4 28.678 401 226 19 30 405 2 367 1.15e-13 73.9
Msa0823580 AT3G59210.3 28.678 401 226 19 30 405 2 367 1.15e-13 73.9
Msa0823580 AT5G38390.1 25.373 469 249 18 34 460 1 410 2.03e-13 72.8
Msa0823580 AT2G26030.2 28.523 298 178 14 212 484 75 362 2.21e-13 72.0
Msa0823580 AT5G22660.1 24.927 341 185 11 35 349 13 308 2.26e-13 71.6
Msa0823580 AT3G59190.1 25.352 426 256 18 30 438 7 387 2.37e-13 72.4
Msa0823580 AT1G78840.1 22.803 478 294 16 32 484 2 429 2.58e-13 72.4
Msa0823580 AT1G78840.2 22.803 478 294 16 32 484 2 429 2.58e-13 72.4
Msa0823580 AT3G59190.2 25.952 420 256 18 30 441 7 379 3.63e-13 72.4
Msa0823580 AT5G44980.3 26.300 327 187 14 33 341 2 292 5.28e-13 70.5
Msa0823580 AT5G44980.4 26.300 327 187 14 33 341 2 292 5.28e-13 70.5
Msa0823580 AT4G22280.1 25.000 464 275 20 34 482 1 406 5.96e-13 71.2
Msa0823580 AT5G56810.2 29.682 283 148 11 23 292 2 246 6.58e-13 70.1
Msa0823580 AT5G38396.1 25.277 451 284 18 34 460 1 422 8.62e-13 70.9
Msa0823580 AT2G42730.1 24.681 470 303 18 35 483 5 444 1.03e-12 70.9
Msa0823580 AT4G03220.1 24.516 465 294 19 34 462 23 466 2.55e-12 69.7
Msa0823580 AT5G53640.1 28.311 219 110 7 35 248 22 198 2.79e-12 67.0
Msa0823580 AT5G44850.1 23.750 400 220 16 89 484 7 325 2.97e-12 68.6
Msa0823580 AT5G41630.1 29.224 219 123 8 35 246 12 205 1.00e-11 67.4
Msa0823580 AT3G59170.1 27.129 317 176 10 35 319 7 300 1.05e-11 67.4
Msa0823580 AT5G02930.1 26.861 309 168 13 18 316 10 270 1.19e-11 67.4
Msa0823580 AT3G62440.1 24.551 501 285 22 34 489 1 453 1.46e-11 67.0
Msa0823580 AT5G35995.2 24.573 468 264 19 35 460 5 425 1.59e-11 67.0
Msa0823580 AT5G35995.1 24.573 468 264 19 35 460 5 425 1.59e-11 67.0
Msa0823580 AT5G50270.1 25.942 451 275 17 34 471 1 405 1.95e-11 66.6
Msa0823580 AT5G56700.1 26.786 224 133 8 103 321 22 219 2.80e-11 64.7
Msa0823580 AT2G26030.5 27.839 273 163 13 236 484 18 280 2.83e-11 65.1
Msa0823580 AT3G54910.3 25.320 391 244 14 100 484 19 367 3.73e-11 65.5
Msa0823580 AT3G54910.1 25.320 391 244 14 100 484 19 367 3.73e-11 65.5
Msa0823580 AT3G54910.2 25.320 391 244 14 100 484 19 367 3.73e-11 65.5
Msa0823580 AT5G56325.1 25.094 267 177 9 234 490 11 264 4.42e-11 63.9
Msa0823580 AT5G56800.1 26.592 267 173 8 209 467 71 322 5.06e-11 64.7

Find 126 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTTGTTAACCACTTTAT+TGG 0.143333 5_3:+62274744 Msa0823580:three_prime_UTR
ACTACTAGACATGTATAATT+TGG 0.197938 5_3:+62270748 Msa0823580:CDS
GGTTCAACAGATTCACTTTC+AGG 0.208119 5_3:-62271043 None:intergenic
CTCGCAAATGGCGCAATCTT+TGG 0.272398 5_3:+62269921 Msa0823580:CDS
GACTCCAGACCAACAATAAA+AGG 0.279633 5_3:-62274591 None:intergenic
TTACCGCCGCCGGCTTCAAC+AGG 0.285165 5_3:+62270194 Msa0823580:CDS
CGAAGTGTGGCCAAAGATTC+AGG 0.291932 5_3:-62270839 None:intergenic
TAAAGCAAGTGGCGAAATTC+AGG 0.293563 5_3:-62271262 None:intergenic
TGAATCTTTGGCCACACTTC+GGG 0.320102 5_3:+62270841 Msa0823580:CDS
AAATGGGATACAAGACATTT+AGG 0.331229 5_3:-62271515 None:intergenic
CTGTCCTGTTCTCGAAAATC+TGG 0.345977 5_3:+62270802 Msa0823580:CDS
ATTCATCACCTTCATATGAA+TGG 0.356856 5_3:+62271471 Msa0823580:CDS
TGTGGTACGAATGCAGGTTT+TGG 0.357467 5_3:-62269888 None:intergenic
GTCAATCGAGTGGTTATAGA+AGG 0.357684 5_3:-62270116 None:intergenic
GGCCTCCTTCTTCCAATGTC+GGG 0.367638 5_3:-62269753 None:intergenic
AACCACTTTATTGGAAATAC+AGG 0.371022 5_3:+62274753 Msa0823580:three_prime_UTR
GATGAAACTCCTCGAGGTTT+GGG 0.377236 5_3:-62270162 None:intergenic
AGATGAAACTCCTCGAGGTT+TGG 0.379740 5_3:-62270163 None:intergenic
GTTATCGAATTCATAAATTA+CGG 0.385345 5_3:-62269984 None:intergenic
GGAGAGGATGTGATGTAGTA+AGG 0.386148 5_3:-62269855 None:intergenic
GGGCAAGAGAAGAGGGAAAC+AGG 0.388572 5_3:-62270220 None:intergenic
GAAGGTCAATAAAGGTCAAA+TGG 0.393848 5_3:-62271532 None:intergenic
ATGTGATGTAGTAAGGAGTT+TGG 0.398364 5_3:-62269848 None:intergenic
TCCGCAAATCTCGCATTGTT+CGG 0.399549 5_3:+62270056 Msa0823580:CDS
GACTCTGCCGCCTCCGCCAT+CGG 0.401729 5_3:-62269785 None:intergenic
TCCGAACAATGCGAGATTTG+CGG 0.403727 5_3:-62270057 None:intergenic
ATCGTCAAATTCTCTATCAT+AGG 0.406822 5_3:+62270295 Msa0823580:CDS
AGCATCACGAAACGTGATAT+TGG 0.407324 5_3:-62270963 None:intergenic
TTGGAAGAATCTCGAAGCCT+TGG 0.421279 5_3:+62269940 Msa0823580:CDS
CTCCTCGAGGTTTGGGCCAA+TGG 0.421806 5_3:-62270155 None:intergenic
AGTCTTCTCCGAGCTCTCTC+TGG 0.426037 5_3:+62271073 Msa0823580:CDS
CACCCCTCGTTTCTCGCAAA+TGG 0.426304 5_3:+62269909 Msa0823580:CDS
TTTCGTGATGCTGCTTCTGT+TGG 0.427729 5_3:+62270974 Msa0823580:CDS
ACTTGCTTTATATAGAGCTT+TGG 0.428633 5_3:+62271275 Msa0823580:CDS
TTAACAAATAATCAGATAGA+TGG 0.443857 5_3:-62274732 None:intergenic
TTCATCACCTTCATATGAAT+GGG 0.445404 5_3:+62271472 Msa0823580:CDS
TTATCGAATTCATAAATTAC+GGG 0.447046 5_3:-62269983 None:intergenic
GGATACTCCGATGGCGGAGG+CGG 0.450270 5_3:+62269778 Msa0823580:CDS
TGCCTGAGAGAGACAAGGTT+AGG 0.451617 5_3:-62270241 None:intergenic
TCTGCAATTGCAAGACGATT+CGG 0.452828 5_3:+62270694 Msa0823580:CDS
TTCACTTCCCATTCATATGA+AGG 0.453446 5_3:-62271479 None:intergenic
TCAGCACGTTCACGTGGCTC+TGG 0.454535 5_3:+62274514 Msa0823580:CDS
GTAGTAAGGAGTTTGGTAGT+TGG 0.454541 5_3:-62269841 None:intergenic
ATATTCTCGAAGGTCAATAA+AGG 0.454998 5_3:-62271540 None:intergenic
GCCCTAACCTTGTCTCTCTC+AGG 0.455076 5_3:+62270239 Msa0823580:CDS
CTGAATCTTTGGCCACACTT+CGG 0.455360 5_3:+62270840 Msa0823580:CDS
GATCAGGCGCGTCTATTTCA+AGG 0.461395 5_3:-62270922 None:intergenic
ATCAATGTTGAGAATGAGGT+TGG 0.461553 5_3:+62270893 Msa0823580:CDS
GACATTTGCAGTGTGCTTTG+CGG 0.462046 5_3:+62274436 Msa0823580:intron
TCTCGGAAATTTAAATGAGC+TGG 0.464659 5_3:+62271562 Msa0823580:CDS
TTCGTGATGCTGCTTCTGTT+GGG 0.465190 5_3:+62270975 Msa0823580:CDS
CGTTCACGTGGCTCTGGCCG+TGG 0.465821 5_3:+62274520 Msa0823580:CDS
GTTTAATTCCAGAGAGAGCT+CGG 0.466178 5_3:-62271081 None:intergenic
GAAATAACTGAATGGGGACT+TGG 0.472171 5_3:-62274828 None:intergenic
TTCGTGATTAGTTAGTCTCA+TGG 0.474626 5_3:+62274562 Msa0823580:exon
TGGCCTCCTTCTTCCAATGT+CGG 0.475475 5_3:-62269754 None:intergenic
TCAATGTTGAGAATGAGGTT+GGG 0.476409 5_3:+62270894 Msa0823580:CDS
AACCTGTATTTCCAATAAAG+TGG 0.477096 5_3:-62274755 None:intergenic
TGACACGTAGCAGATGCCTT+TGG 0.478856 5_3:-62271692 None:intergenic
AGCAGATGCCTTTGGTAGAT+CGG 0.485724 5_3:-62271684 None:intergenic
TCTGTGAATGTCCTTCTCTC+TGG 0.486132 5_3:+62270779 Msa0823580:CDS
ATTGACCTTCGAGAATATCT+CGG 0.492718 5_3:+62271545 Msa0823580:CDS
CACCCTGTTGAAGCCGGCGG+CGG 0.502744 5_3:-62270197 None:intergenic
CAATGTTGAGAATGAGGTTG+GGG 0.505466 5_3:+62270895 Msa0823580:CDS
AACAGGCACCCTGTTGAAGC+CGG 0.507985 5_3:-62270203 None:intergenic
AAGGTCAATAAAGGTCAAAT+GGG 0.512953 5_3:-62271531 None:intergenic
GTTATGAGAGTTTGTAGCAC+AGG 0.517195 5_3:-62271346 None:intergenic
ACGTGATATTGGTGAGACTA+AGG 0.517984 5_3:-62270952 None:intergenic
AGACTAAGGTACTTGAGATC+AGG 0.518799 5_3:-62270938 None:intergenic
CTCCGCCATCGGAGTATCCA+TGG 0.520160 5_3:-62269774 None:intergenic
TCGTCAAATTCTCTATCATA+GGG 0.520873 5_3:+62270296 Msa0823580:CDS
TTTACTAAGAAGAAGACGTT+GGG 0.521363 5_3:+62274460 Msa0823580:CDS
ACGTGGATCAATGCCGCCAT+TGG 0.525825 5_3:+62270139 Msa0823580:CDS
AATTCAGGAAAATCTAAGAC+AGG 0.526097 5_3:-62271247 None:intergenic
GCTCGGAGAAGACTGAGTAC+AGG 0.526432 5_3:-62271064 None:intergenic
GAATTCATAAATTACGGGGC+TGG 0.526816 5_3:-62269978 None:intergenic
GAGGGGTGTGGTACGAATGC+AGG 0.527172 5_3:-62269894 None:intergenic
TCTGTCAATGTCGTCATCGT+CGG 0.528078 5_3:-62269813 None:intergenic
CTCACTCTGCTTACCGCCGC+CGG 0.531519 5_3:+62270184 Msa0823580:CDS
AACAGATTCACTTTCAGGAG+TGG 0.531982 5_3:-62271038 None:intergenic
TAACAAATAATCAGATAGAT+GGG 0.540497 5_3:-62274731 None:intergenic
GTCAATGTCGTCATCGTCGG+AGG 0.548656 5_3:-62269810 None:intergenic
CACTCCCCGACATTGGAAGA+AGG 0.550649 5_3:+62269748 Msa0823580:CDS
GCCTGAGAGAGACAAGGTTA+GGG 0.552761 5_3:-62270240 None:intergenic
GAACAGGACAGCCAGAGAGA+AGG 0.554699 5_3:-62270790 None:intergenic
AAGGTTAGGGCAAGAGAAGA+GGG 0.555833 5_3:-62270227 None:intergenic
GAGGACAGTGTTGACGAAAA+CGG 0.556678 5_3:-62270029 None:intergenic
CAAGGTTAGGGCAAGAGAAG+AGG 0.557826 5_3:-62270228 None:intergenic
TACCGCCGCCGGCTTCAACA+GGG 0.559701 5_3:+62270195 Msa0823580:CDS
CTCGAGGTTTGGGCCAATGG+CGG 0.559983 5_3:-62270152 None:intergenic
GAAGGTGATGAATCAAATGA+TGG 0.561486 5_3:-62271461 None:intergenic
CATGGATACTCCGATGGCGG+AGG 0.564213 5_3:+62269775 Msa0823580:CDS
TGCGAGATTTGCGGAGAGTG+AGG 0.565813 5_3:-62270048 None:intergenic
TCTCATAACATTCAACTACA+AGG 0.568167 5_3:+62271360 Msa0823580:CDS
GCTGCTTAGTTTAACTACAA+AGG 0.572115 5_3:+62271111 Msa0823580:CDS
GCCTCCTTCTTCCAATGTCG+GGG 0.579676 5_3:-62269752 None:intergenic
GCGCCATTTGCGAGAAACGA+GGG 0.586636 5_3:-62269912 None:intergenic
AACAAACATAATAGCTGCCA+CGG 0.588532 5_3:-62274537 None:intergenic
TTTGCGAGAAACGAGGGGTG+TGG 0.589736 5_3:-62269906 None:intergenic
ACATTGGAAGAAGGAGGCCA+TGG 0.589874 5_3:+62269757 Msa0823580:CDS
AATTTCCGAGATATTCTCGA+AGG 0.596203 5_3:-62271550 None:intergenic
GGAACTGTCGCAGAAATCCA+AGG 0.603410 5_3:-62269957 None:intergenic
AAAGCTCTATATAAAGCAAG+TGG 0.607124 5_3:-62271273 None:intergenic
TGAAGATGACACCCGAAGTG+TGG 0.610539 5_3:-62270852 None:intergenic
TTCAGGAAAATCTAAGACAG+GGG 0.611075 5_3:-62271245 None:intergenic
CTTTACTAAGAAGAAGACGT+TGG 0.614894 5_3:+62274459 Msa0823580:CDS
GGAGGCCATGGATACTCCGA+TGG 0.617706 5_3:+62269769 Msa0823580:CDS
AGAAGACGTTGGGAGCAAAA+CGG 0.618443 5_3:+62274470 Msa0823580:CDS
TGTCATCTTCAACCTTGAAG+AGG 0.618499 5_3:+62270864 Msa0823580:CDS
GGCCATGGATACTCCGATGG+CGG 0.619860 5_3:+62269772 Msa0823580:CDS
TGTTGGGAACTTGCACAATG+TGG 0.624137 5_3:+62270991 Msa0823580:CDS
TGCGCCATTTGCGAGAAACG+AGG 0.630626 5_3:-62269913 None:intergenic
TTAATTTCAGCACGTTCACG+TGG 0.635504 5_3:+62274508 Msa0823580:CDS
CGCCATTTGCGAGAAACGAG+GGG 0.635930 5_3:-62269911 None:intergenic
CGCCATTGGCCCAAACCTCG+AGG 0.640548 5_3:+62270153 Msa0823580:CDS
TCAATCGAGTGGTTATAGAA+GGG 0.641238 5_3:-62270115 None:intergenic
ATTCAGGAAAATCTAAGACA+GGG 0.645585 5_3:-62271246 None:intergenic
GAACGTGATAGCATGAGAGA+CGG 0.645881 5_3:-62270084 None:intergenic
AGGCACCCTGTTGAAGCCGG+CGG 0.664495 5_3:-62270200 None:intergenic
TGATCCACGTGTCAATCGAG+TGG 0.668936 5_3:-62270126 None:intergenic
AGTTGCAGCAACTTCAGTGA+CGG 0.673174 5_3:-62270728 None:intergenic
TATCGAATTCATAAATTACG+GGG 0.674759 5_3:-62269982 None:intergenic
TCCCCGACATTGGAAGAAGG+AGG 0.686621 5_3:+62269751 Msa0823580:CDS
ATTGTTGCCTGAGAGAGACA+AGG 0.696101 5_3:-62270246 None:intergenic
ATAACCACTCGATTGACACG+TGG 0.713847 5_3:+62270122 Msa0823580:CDS
GAGTGAGATGAAACTCCTCG+AGG 0.759501 5_3:-62270168 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTTTTTTTTTTTAAAGA+AGG + chr5_3:62274779-62274798 Msa0823580:three_prime_UTR 10.0%
!! AAACAATATAGTTGAAAATT+TGG - chr5_3:62271850-62271869 None:intergenic 15.0%
!! AAATAAATTTAGATACTTTG+GGG - chr5_3:62271893-62271912 None:intergenic 15.0%
!! CAAATAAATTTAGATACTTT+GGG - chr5_3:62271894-62271913 None:intergenic 15.0%
!! ACAAATAAATTTAGATACTT+TGG - chr5_3:62271895-62271914 None:intergenic 15.0%
!!! TTTTCTCATAATTAAATCTA+AGG + chr5_3:62271923-62271942 Msa0823580:intron 15.0%
!! GTTTAGGAATTATAAATAAA+AGG - chr5_3:62272140-62272159 None:intergenic 15.0%
!!! TAAGTTACAATTTCTATTTT+TGG + chr5_3:62272533-62272552 Msa0823580:intron 15.0%
!! GTGAAATAGATTAAAAATTA+GGG + chr5_3:62273859-62273878 Msa0823580:intron 15.0%
!! TATAGAGCATATAAAAAAAA+TGG - chr5_3:62274646-62274665 None:intergenic 15.0%
!! TTATCGAATTCATAAATTAC+GGG - chr5_3:62269986-62270005 None:intergenic 20.0%
!! GTTATCGAATTCATAAATTA+CGG - chr5_3:62269987-62270006 None:intergenic 20.0%
!! AAAAACAAAAAAAGGATGAA+AGG - chr5_3:62270273-62270292 None:intergenic 20.0%
!! GACGATAAAAAAACAAAAAA+AGG - chr5_3:62270281-62270300 None:intergenic 20.0%
!! ATTAACAGCTTATTTCAATA+GGG + chr5_3:62270528-62270547 Msa0823580:intron 20.0%
!!! ATTTTCAACTATATTGTTTG+TGG + chr5_3:62271851-62271870 Msa0823580:intron 20.0%
!! AATAAATTTAGATACTTTGG+GGG - chr5_3:62271892-62271911 None:intergenic 20.0%
!! TTTATTAATGATACATCTCA+AGG - chr5_3:62272196-62272215 None:intergenic 20.0%
!! TTGGAATTTAGTTAGAATTA+AGG + chr5_3:62272337-62272356 Msa0823580:intron 20.0%
!! TGGAATTTAGTTAGAATTAA+GGG + chr5_3:62272338-62272357 Msa0823580:intron 20.0%
!!! ATACTCTATTTTTACTACTT+CGG - chr5_3:62273352-62273371 None:intergenic 20.0%
!! ATAATAAAAAAAAAGAGCCT+TGG + chr5_3:62273469-62273488 Msa0823580:intron 20.0%
!! TAATAAAAAAAAAGAGCCTT+GGG + chr5_3:62273470-62273489 Msa0823580:intron 20.0%
!!! GAAAGATGAAGTTTTAATAT+TGG - chr5_3:62273745-62273764 None:intergenic 20.0%
!!! GTTGTTATTGATTATAAGAA+CGG + chr5_3:62273837-62273856 Msa0823580:intron 20.0%
!! GGTGAAATAGATTAAAAATT+AGG + chr5_3:62273858-62273877 Msa0823580:intron 20.0%
!! AATTAGGGTTACATAAAATT+AGG + chr5_3:62273874-62273893 Msa0823580:intron 20.0%
!! ATTAGGGTTACATAAAATTA+GGG + chr5_3:62273875-62273894 Msa0823580:intron 20.0%
!! TAACAAATAATCAGATAGAT+GGG - chr5_3:62274734-62274753 None:intergenic 20.0%
!! TTAACAAATAATCAGATAGA+TGG - chr5_3:62274735-62274754 None:intergenic 20.0%
!!! TTATTTGTTAACCACTTTAT+TGG + chr5_3:62274744-62274763 Msa0823580:three_prime_UTR 20.0%
!!! TTTTTTAAAGAAGGAAATAC+AGG + chr5_3:62274788-62274807 Msa0823580:three_prime_UTR 20.0%
! TATCGAATTCATAAATTACG+GGG - chr5_3:62269985-62270004 None:intergenic 25.0%
! TTCAAATTATTATCCCTGTT+GGG - chr5_3:62270400-62270419 None:intergenic 25.0%
! TTTCAAATTATTATCCCTGT+TGG - chr5_3:62270401-62270420 None:intergenic 25.0%
! CATTAACAGCTTATTTCAAT+AGG + chr5_3:62270527-62270546 Msa0823580:intron 25.0%
! ACTACTAGACATGTATAATT+TGG + chr5_3:62270748-62270767 Msa0823580:CDS 25.0%
!!! ATTGATTTTTAACCTCTTCA+AGG - chr5_3:62270879-62270898 None:intergenic 25.0%
! AAAAATCAATGTTGAGAATG+AGG + chr5_3:62270889-62270908 Msa0823580:CDS 25.0%
! AGATCCAAACAAAAAATACA+CGG - chr5_3:62271408-62271427 None:intergenic 25.0%
!!! AACTCTTACTTTATTTTACG+TGG + chr5_3:62271756-62271775 Msa0823580:intron 25.0%
! CAATATAGTTGAAAATTTGG+TGG - chr5_3:62271847-62271866 None:intergenic 25.0%
!!! CAATTTCTATTTTTGGCTAT+TGG + chr5_3:62272540-62272559 Msa0823580:intron 25.0%
!!! TTTTCTTGCTATTCTATTCT+AGG + chr5_3:62272993-62273012 Msa0823580:intron 25.0%
!!! AACATAAAGTTCTAGGTTTA+AGG - chr5_3:62273538-62273557 None:intergenic 25.0%
! CAATAACAACTATTAATCGA+AGG - chr5_3:62273827-62273846 None:intergenic 25.0%
!! TAAAATTAGGGTTTAAAGCT+TGG + chr5_3:62273887-62273906 Msa0823580:intron 25.0%
!! AACAATTCATCTTTTGTTCT+TGG - chr5_3:62274081-62274100 None:intergenic 25.0%
! ATAATTAGTAGAAGCTGATT+CGG - chr5_3:62274344-62274363 None:intergenic 25.0%
! TTATTTGTAGTCTTTCTTGT+TGG + chr5_3:62274383-62274402 Msa0823580:intron 25.0%
! TATTTGTAGTCTTTCTTGTT+GGG + chr5_3:62274384-62274403 Msa0823580:intron 25.0%
ATCGTCAAATTCTCTATCAT+AGG + chr5_3:62270295-62270314 Msa0823580:CDS 30.0%
TCGTCAAATTCTCTATCATA+GGG + chr5_3:62270296-62270315 Msa0823580:CDS 30.0%
AGTCTATTCAAACATACAAC+TGG + chr5_3:62270347-62270366 Msa0823580:intron 30.0%
GTCTATTCAAACATACAACT+GGG + chr5_3:62270348-62270367 Msa0823580:intron 30.0%
TCAAATTATTATCCCTGTTG+GGG - chr5_3:62270399-62270418 None:intergenic 30.0%
TTCATGACAACTTACTAATC+CGG - chr5_3:62270492-62270511 None:intergenic 30.0%
! ATTCAGGAAAATCTAAGACA+GGG - chr5_3:62271249-62271268 None:intergenic 30.0%
! AATTCAGGAAAATCTAAGAC+AGG - chr5_3:62271250-62271269 None:intergenic 30.0%
AAAGCTCTATATAAAGCAAG+TGG - chr5_3:62271276-62271295 None:intergenic 30.0%
ACTTGCTTTATATAGAGCTT+TGG + chr5_3:62271275-62271294 Msa0823580:CDS 30.0%
TCTCATAACATTCAACTACA+AGG + chr5_3:62271360-62271379 Msa0823580:CDS 30.0%
ATTCATCACCTTCATATGAA+TGG + chr5_3:62271471-62271490 Msa0823580:CDS 30.0%
TTCATCACCTTCATATGAAT+GGG + chr5_3:62271472-62271491 Msa0823580:CDS 30.0%
! AGACATTTAGGAACACTTTT+CGG - chr5_3:62271506-62271525 None:intergenic 30.0%
AAATGGGATACAAGACATTT+AGG - chr5_3:62271518-62271537 None:intergenic 30.0%
AAGGTCAATAAAGGTCAAAT+GGG - chr5_3:62271534-62271553 None:intergenic 30.0%
ATATTCTCGAAGGTCAATAA+AGG - chr5_3:62271543-62271562 None:intergenic 30.0%
! ACAAGCTATGTTTTGCAAAA+TGG + chr5_3:62271590-62271609 Msa0823580:CDS 30.0%
TTCAACTATATTGTTTGTGG+TGG + chr5_3:62271854-62271873 Msa0823580:intron 30.0%
GCTAGTTAGAATATGAGTAA+TGG + chr5_3:62272010-62272029 Msa0823580:intron 30.0%
!! GAGTAATGGATAGTTAAGTT+TGG + chr5_3:62272024-62272043 Msa0823580:intron 30.0%
AATGGATAGTTAAGTTTGGA+TGG + chr5_3:62272028-62272047 Msa0823580:intron 30.0%
ATGGATAGTTAAGTTTGGAT+GGG + chr5_3:62272029-62272048 Msa0823580:intron 30.0%
! GAAAAGAATAAGAGTGTACT+GGG - chr5_3:62272115-62272134 None:intergenic 30.0%
! TGAAAAGAATAAGAGTGTAC+TGG - chr5_3:62272116-62272135 None:intergenic 30.0%
AACTACAACTCATTGAGTTT+AGG - chr5_3:62272156-62272175 None:intergenic 30.0%
ACTCCTAACATAGATTATCA+TGG + chr5_3:62272438-62272457 Msa0823580:intron 30.0%
CTCCTAACATAGATTATCAT+GGG + chr5_3:62272439-62272458 Msa0823580:intron 30.0%
TCCTAACATAGATTATCATG+GGG + chr5_3:62272440-62272459 Msa0823580:intron 30.0%
GTAAGAACTAGAAGTTAGAA+TGG - chr5_3:62272667-62272686 None:intergenic 30.0%
AGAGATGATACAACTCATTA+TGG - chr5_3:62272691-62272710 None:intergenic 30.0%
TTGTTATAATGCCAATGACA+TGG - chr5_3:62272749-62272768 None:intergenic 30.0%
GCAAGTAAACATTGTTCTAT+TGG - chr5_3:62272870-62272889 None:intergenic 30.0%
TCAAATACATTGACAACACA+AGG - chr5_3:62273020-62273039 None:intergenic 30.0%
AATAACTGGTTAAGGTAAGT+AGG + chr5_3:62273156-62273175 Msa0823580:intron 30.0%
GACATTTCACATTTGTGTTA+AGG + chr5_3:62273194-62273213 Msa0823580:intron 30.0%
! TCACATTTGTGTTAAGGTTT+TGG + chr5_3:62273200-62273219 Msa0823580:intron 30.0%
!!! TTTTGGTTTGAAGCATCAAT+GGG + chr5_3:62273217-62273236 Msa0823580:intron 30.0%
!! CTTTAGTTGATGATTAGAAG+AGG + chr5_3:62273404-62273423 Msa0823580:intron 30.0%
AAGAGGTTAAATTGCAAAGT+TGG + chr5_3:62273421-62273440 Msa0823580:intron 30.0%
AGAGGTTAAATTGCAAAGTT+GGG + chr5_3:62273422-62273441 Msa0823580:intron 30.0%
!!! TTAAGGTTTTGGTTTGTGAA+GGG - chr5_3:62273521-62273540 None:intergenic 30.0%
!!! TTTAAGGTTTTGGTTTGTGA+AGG - chr5_3:62273522-62273541 None:intergenic 30.0%
!!! AAGTTCTAGGTTTAAGGTTT+TGG - chr5_3:62273532-62273551 None:intergenic 30.0%
TAGGTCTAACATAAAGTTCT+AGG - chr5_3:62273545-62273564 None:intergenic 30.0%
TAGCAATCAACCATGAAAAT+AGG - chr5_3:62273634-62273653 None:intergenic 30.0%
TCATCACAAATATTAAGCGA+AGG - chr5_3:62273771-62273790 None:intergenic 30.0%
! GTTTAAAGCTTGGTTTGATT+AGG + chr5_3:62273897-62273916 Msa0823580:intron 30.0%
! ATTCTAGTGATTAGTTGCTT+AGG - chr5_3:62274148-62274167 None:intergenic 30.0%
!!! TATTTTAACCTAAAAGCCTG+TGG - chr5_3:62274184-62274203 None:intergenic 30.0%
!!! ACAGGCTTTTAGGTTAAAAT+AGG + chr5_3:62274183-62274202 Msa0823580:intron 30.0%
GGGATGAAAATACGAAATAT+GGG - chr5_3:62274323-62274342 None:intergenic 30.0%
! TAATTAGTAGAAGCTGATTC+GGG - chr5_3:62274343-62274362 None:intergenic 30.0%
TTTACTAAGAAGAAGACGTT+GGG + chr5_3:62274460-62274479 Msa0823580:CDS 30.0%
! TGGATGATTCCTTTTATTGT+TGG + chr5_3:62274582-62274601 Msa0823580:three_prime_UTR 30.0%
AACCACTTTATTGGAAATAC+AGG + chr5_3:62274753-62274772 Msa0823580:three_prime_UTR 30.0%
AACCTGTATTTCCAATAAAG+TGG - chr5_3:62274758-62274777 None:intergenic 30.0%
ATGTGATGTAGTAAGGAGTT+TGG - chr5_3:62269851-62269870 None:intergenic 35.0%
TCAATCGAGTGGTTATAGAA+GGG - chr5_3:62270118-62270137 None:intergenic 35.0%
!! ATTTCCAGATTTTCGAGAAC+AGG - chr5_3:62270809-62270828 None:intergenic 35.0%
! TTCTTTTGCTCCTGAATCTT+TGG + chr5_3:62270829-62270848 Msa0823580:CDS 35.0%
ATCAATGTTGAGAATGAGGT+TGG + chr5_3:62270893-62270912 Msa0823580:CDS 35.0%
TCAATGTTGAGAATGAGGTT+GGG + chr5_3:62270894-62270913 Msa0823580:CDS 35.0%
GCTGCTTAGTTTAACTACAA+AGG + chr5_3:62271111-62271130 Msa0823580:CDS 35.0%
! TTCAGGAAAATCTAAGACAG+GGG - chr5_3:62271248-62271267 None:intergenic 35.0%
!!! GTGTCCGTGTATTTTTTGTT+TGG + chr5_3:62271401-62271420 Msa0823580:intron 35.0%
!! AATCAAATGATGGATGCATC+TGG - chr5_3:62271454-62271473 None:intergenic 35.0%
GAAGGTGATGAATCAAATGA+TGG - chr5_3:62271464-62271483 None:intergenic 35.0%
TTCACTTCCCATTCATATGA+AGG - chr5_3:62271482-62271501 None:intergenic 35.0%
GAAGGTCAATAAAGGTCAAA+TGG - chr5_3:62271535-62271554 None:intergenic 35.0%
ATTGACCTTCGAGAATATCT+CGG + chr5_3:62271545-62271564 Msa0823580:CDS 35.0%
AATTTCCGAGATATTCTCGA+AGG - chr5_3:62271553-62271572 None:intergenic 35.0%
TCTCGGAAATTTAAATGAGC+TGG + chr5_3:62271562-62271581 Msa0823580:CDS 35.0%
! AGTTTTTCGCTAGAACAACA+GGG + chr5_3:62271641-62271660 Msa0823580:CDS 35.0%
AAAAATCTCCGATCTACCAA+AGG + chr5_3:62271676-62271695 Msa0823580:CDS 35.0%
TGGCATGCATGTAAAAACAA+GGG - chr5_3:62271827-62271846 None:intergenic 35.0%
AGAAGCCTAGAAATACAGTT+AGG + chr5_3:62271959-62271978 Msa0823580:intron 35.0%
CTAGAAATACAGTTAGGCTT+GGG + chr5_3:62271965-62271984 Msa0823580:intron 35.0%
ATAGTTAAGTTTGGATGGGA+AGG + chr5_3:62272033-62272052 Msa0823580:intron 35.0%
TAGTTAAGTTTGGATGGGAA+GGG + chr5_3:62272034-62272053 Msa0823580:intron 35.0%
CATTCAGTTAACTGGAGAAT+TGG + chr5_3:62272061-62272080 Msa0823580:intron 35.0%
AATAGTGAGAGTGAGAGAAA+AGG + chr5_3:62272310-62272329 Msa0823580:intron 35.0%
!! TAGGAGTGTCATCAAAATGA+TGG - chr5_3:62272425-62272444 None:intergenic 35.0%
CCTAACATAGATTATCATGG+GGG + chr5_3:62272441-62272460 Msa0823580:intron 35.0%
ACTAACAGTTGAAATGTGTC+AGG - chr5_3:62272487-62272506 None:intergenic 35.0%
ACTAGAAGTTAGAATGGCAT+AGG - chr5_3:62272661-62272680 None:intergenic 35.0%
TTGTATCATCTCTCCTTATG+AGG + chr5_3:62272698-62272717 Msa0823580:intron 35.0%
TGTATCATCTCTCCTTATGA+GGG + chr5_3:62272699-62272718 Msa0823580:intron 35.0%
GTTGATTACACTCCAATAGA+TGG + chr5_3:62272922-62272941 Msa0823580:intron 35.0%
AGACTAAGATGGGAAATAAC+TGG + chr5_3:62273142-62273161 Msa0823580:intron 35.0%
AGATGGGAAATAACTGGTTA+AGG + chr5_3:62273148-62273167 Msa0823580:intron 35.0%
!!! GTTTTGGTTTGAAGCATCAA+TGG + chr5_3:62273216-62273235 Msa0823580:intron 35.0%
!! TTTGGTTTGAAGCATCAATG+GGG + chr5_3:62273218-62273237 Msa0823580:intron 35.0%
TTGATGTCTTCGTGAGATTT+AGG - chr5_3:62273316-62273335 None:intergenic 35.0%
! AATAGAGTATCATTCCGACA+CGG + chr5_3:62273362-62273381 Msa0823580:intron 35.0%
GAGGTTAAATTGCAAAGTTG+GGG + chr5_3:62273423-62273442 Msa0823580:intron 35.0%
AAAAAGAGCCTTGGGATTAT+TGG + chr5_3:62273478-62273497 Msa0823580:intron 35.0%
ATGATGAACCAATAATCCCA+AGG - chr5_3:62273489-62273508 None:intergenic 35.0%
TAGGCTAAAGAGTAGAAAGT+AGG - chr5_3:62273564-62273583 None:intergenic 35.0%
TAGCCTATCACATATCCTTT+CGG + chr5_3:62273577-62273596 Msa0823580:intron 35.0%
ATCAACCATGAAAATAGGCA+TGG - chr5_3:62273629-62273648 None:intergenic 35.0%
CAATAAAGTTTCGAGCTTCA+AGG - chr5_3:62273664-62273683 None:intergenic 35.0%
CTCGAAACTTTATTGTCTCA+AGG + chr5_3:62273669-62273688 Msa0823580:intron 35.0%
GGAACAAGTGAATATAGACA+AGG - chr5_3:62273724-62273743 None:intergenic 35.0%
CGGGATGAAAATACGAAATA+TGG - chr5_3:62274324-62274343 None:intergenic 35.0%
CTTTACTAAGAAGAAGACGT+TGG + chr5_3:62274459-62274478 Msa0823580:CDS 35.0%
AACAAACATAATAGCTGCCA+CGG - chr5_3:62274540-62274559 None:intergenic 35.0%
! TTCGTGATTAGTTAGTCTCA+TGG + chr5_3:62274562-62274581 Msa0823580:exon 35.0%
! GATTCCTTTTATTGTTGGTC+TGG + chr5_3:62274587-62274606 Msa0823580:three_prime_UTR 35.0%
! GTAGTAAGGAGTTTGGTAGT+TGG - chr5_3:62269844-62269863 None:intergenic 40.0%
!! TACGAATGCAGGTTTTGGTA+GGG - chr5_3:62269886-62269905 None:intergenic 40.0%
GAATTCATAAATTACGGGGC+TGG - chr5_3:62269981-62270000 None:intergenic 40.0%
GTCAATCGAGTGGTTATAGA+AGG - chr5_3:62270119-62270138 None:intergenic 40.0%
TTGTGTCGTGTTTGTGACAT+GGG + chr5_3:62270452-62270471 Msa0823580:intron 40.0%
TCTGCAATTGCAAGACGATT+CGG + chr5_3:62270694-62270713 Msa0823580:CDS 40.0%
TGTCATCTTCAACCTTGAAG+AGG + chr5_3:62270864-62270883 Msa0823580:CDS 40.0%
CAATGTTGAGAATGAGGTTG+GGG + chr5_3:62270895-62270914 Msa0823580:CDS 40.0%
! AGACTAAGGTACTTGAGATC+AGG - chr5_3:62270941-62270960 None:intergenic 40.0%
ACGTGATATTGGTGAGACTA+AGG - chr5_3:62270955-62270974 None:intergenic 40.0%
AGCATCACGAAACGTGATAT+TGG - chr5_3:62270966-62270985 None:intergenic 40.0%
AACAGATTCACTTTCAGGAG+TGG - chr5_3:62271041-62271060 None:intergenic 40.0%
GGTTCAACAGATTCACTTTC+AGG - chr5_3:62271046-62271065 None:intergenic 40.0%
GTTTAATTCCAGAGAGAGCT+CGG - chr5_3:62271084-62271103 None:intergenic 40.0%
! CTTTTGTCTTGTACAAGCAG+TGG + chr5_3:62271212-62271231 Msa0823580:intron 40.0%
TAAAGCAAGTGGCGAAATTC+AGG - chr5_3:62271265-62271284 None:intergenic 40.0%
GTTATGAGAGTTTGTAGCAC+AGG - chr5_3:62271349-62271368 None:intergenic 40.0%
! CAGTTTTTCGCTAGAACAAC+AGG + chr5_3:62271640-62271659 Msa0823580:CDS 40.0%
! GTTTTTCGCTAGAACAACAG+GGG + chr5_3:62271642-62271661 Msa0823580:CDS 40.0%
! TTTTTCGCTAGAACAACAGG+GGG + chr5_3:62271643-62271662 Msa0823580:CDS 40.0%
GTGGCATGCATGTAAAAACA+AGG - chr5_3:62271828-62271847 None:intergenic 40.0%
CCAAGCCTAACTGTATTTCT+AGG - chr5_3:62271967-62271986 None:intergenic 40.0%
CCTAGAAATACAGTTAGGCT+TGG + chr5_3:62271964-62271983 Msa0823580:intron 40.0%
AGTTAAGTTTGGATGGGAAG+GGG + chr5_3:62272035-62272054 Msa0823580:intron 40.0%
! ATTGGTGATCAGAAGAGACT+AGG + chr5_3:62272079-62272098 Msa0823580:intron 40.0%
AGCAAGGTGATAGAATTGGT+TGG - chr5_3:62272249-62272268 None:intergenic 40.0%
AACCAATTCTATCACCTTGC+TGG + chr5_3:62272248-62272267 Msa0823580:intron 40.0%
ACCAATTCTATCACCTTGCT+GGG + chr5_3:62272249-62272268 Msa0823580:intron 40.0%
AACCAATGAGATGCTAGTAG+TGG + chr5_3:62272396-62272415 Msa0823580:intron 40.0%
CCCCCATGATAATCTATGTT+AGG - chr5_3:62272444-62272463 None:intergenic 40.0%
GAGCTGCAATGGACATATAT+TGG - chr5_3:62272606-62272625 None:intergenic 40.0%
TAATGCCAATGACATGGTCT+TGG - chr5_3:62272743-62272762 None:intergenic 40.0%
!! ACAACAGCTGATCCACTTTT+TGG + chr5_3:62272803-62272822 Msa0823580:intron 40.0%
!!! TGATCCACTTTTTGGCACAT+GGG + chr5_3:62272811-62272830 Msa0823580:intron 40.0%
!! ACTTTTTGGCACATGGGATA+GGG + chr5_3:62272817-62272836 Msa0823580:intron 40.0%
CTAATAGCTCAAACAGGCAA+TGG - chr5_3:62272948-62272967 None:intergenic 40.0%
GTGCAACTAATAGCTCAAAC+AGG - chr5_3:62272954-62272973 None:intergenic 40.0%
! TTCTAAGGATCAGCTTGTGT+AGG - chr5_3:62273085-62273104 None:intergenic 40.0%
! CTAGTCACAGTGCTATTCTA+AGG - chr5_3:62273100-62273119 None:intergenic 40.0%
TGACCATGACAGACTAAGAT+GGG + chr5_3:62273132-62273151 Msa0823580:intron 40.0%
TTTCCCATCTTAGTCTGTCA+TGG - chr5_3:62273138-62273157 None:intergenic 40.0%
GACAACACTTGCAAGCAATT+AGG + chr5_3:62273288-62273307 Msa0823580:intron 40.0%
TCACGAAGACATCAAATGCA+CGG + chr5_3:62273321-62273340 Msa0823580:intron 40.0%
TGAATTGAACAACTCCGTGT+CGG - chr5_3:62273379-62273398 None:intergenic 40.0%
! GCAAAGTTGGGGTTTTCAAA+TGG + chr5_3:62273434-62273453 Msa0823580:intron 40.0%
AGACCGAAAGGATATGTGAT+AGG - chr5_3:62273583-62273602 None:intergenic 40.0%
! AGCAACCATGCCTATTTTCA+TGG + chr5_3:62273621-62273640 Msa0823580:intron 40.0%
TCTTCTTGTCTTGGGATTGT+TGG - chr5_3:62273942-62273961 None:intergenic 40.0%
GAGTAGACTCTTCTTGTCTT+GGG - chr5_3:62273950-62273969 None:intergenic 40.0%
TGAGTAGACTCTTCTTGTCT+TGG - chr5_3:62273951-62273970 None:intergenic 40.0%
ACTCATGTTCATCGTAGACA+TGG + chr5_3:62273970-62273989 Msa0823580:intron 40.0%
AATGTTCCACAAGAAACCAC+AGG + chr5_3:62274165-62274184 Msa0823580:intron 40.0%
TAAAAGCCTGTGGTTTCTTG+TGG - chr5_3:62274174-62274193 None:intergenic 40.0%
! ACAAGAAACCACAGGCTTTT+AGG + chr5_3:62274173-62274192 Msa0823580:intron 40.0%
TTAATTTCAGCACGTTCACG+TGG + chr5_3:62274508-62274527 Msa0823580:CDS 40.0%
GACTCCAGACCAACAATAAA+AGG - chr5_3:62274594-62274613 None:intergenic 40.0%
TCTGTCAATGTCGTCATCGT+CGG - chr5_3:62269816-62269835 None:intergenic 45.0%
GGAGAGGATGTGATGTAGTA+AGG - chr5_3:62269858-62269877 None:intergenic 45.0%
!! GTACGAATGCAGGTTTTGGT+AGG - chr5_3:62269887-62269906 None:intergenic 45.0%
! TGTGGTACGAATGCAGGTTT+TGG - chr5_3:62269891-62269910 None:intergenic 45.0%
TTGGAAGAATCTCGAAGCCT+TGG + chr5_3:62269940-62269959 Msa0823580:CDS 45.0%
!! GAGGACAGTGTTGACGAAAA+CGG - chr5_3:62270032-62270051 None:intergenic 45.0%
TCCGCAAATCTCGCATTGTT+CGG + chr5_3:62270056-62270075 Msa0823580:CDS 45.0%
TCCGAACAATGCGAGATTTG+CGG - chr5_3:62270060-62270079 None:intergenic 45.0%
GAACGTGATAGCATGAGAGA+CGG - chr5_3:62270087-62270106 None:intergenic 45.0%
ATAACCACTCGATTGACACG+TGG + chr5_3:62270122-62270141 Msa0823580:CDS 45.0%
GATGAAACTCCTCGAGGTTT+GGG - chr5_3:62270165-62270184 None:intergenic 45.0%
AGATGAAACTCCTCGAGGTT+TGG - chr5_3:62270166-62270185 None:intergenic 45.0%
AAGGTTAGGGCAAGAGAAGA+GGG - chr5_3:62270230-62270249 None:intergenic 45.0%
ATTGTTGCCTGAGAGAGACA+AGG - chr5_3:62270249-62270268 None:intergenic 45.0%
ACAACTGGGTCTATGAAGCA+CGG + chr5_3:62270362-62270381 Msa0823580:intron 45.0%
CTTGTGTCGTGTTTGTGACA+TGG + chr5_3:62270451-62270470 Msa0823580:intron 45.0%
TGTGTCGTGTTTGTGACATG+GGG + chr5_3:62270453-62270472 Msa0823580:intron 45.0%
TTACTAATCCGGACACTCCT+CGG - chr5_3:62270481-62270500 None:intergenic 45.0%
AGTTGCAGCAACTTCAGTGA+CGG - chr5_3:62270731-62270750 None:intergenic 45.0%
TCTGTGAATGTCCTTCTCTC+TGG + chr5_3:62270779-62270798 Msa0823580:CDS 45.0%
CTGTCCTGTTCTCGAAAATC+TGG + chr5_3:62270802-62270821 Msa0823580:CDS 45.0%
CTGAATCTTTGGCCACACTT+CGG + chr5_3:62270840-62270859 Msa0823580:CDS 45.0%
TGAATCTTTGGCCACACTTC+GGG + chr5_3:62270841-62270860 Msa0823580:CDS 45.0%
! TTTCGTGATGCTGCTTCTGT+TGG + chr5_3:62270974-62270993 Msa0823580:CDS 45.0%
! TTCGTGATGCTGCTTCTGTT+GGG + chr5_3:62270975-62270994 Msa0823580:CDS 45.0%
TGTTGGGAACTTGCACAATG+TGG + chr5_3:62270991-62271010 Msa0823580:CDS 45.0%
ATGGATGCATCTGGCAACAA+TGG - chr5_3:62271445-62271464 None:intergenic 45.0%
AGCAGATGCCTTTGGTAGAT+CGG - chr5_3:62271687-62271706 None:intergenic 45.0%
!! TAGATACTTTGGGGGTGTCA+TGG - chr5_3:62271884-62271903 None:intergenic 45.0%
GTTAAGTTTGGATGGGAAGG+GGG + chr5_3:62272036-62272055 Msa0823580:intron 45.0%
ACCCAGCAAGGTGATAGAAT+TGG - chr5_3:62272253-62272272 None:intergenic 45.0%
TATCACCTTGCTGGGTGTAT+GGG + chr5_3:62272257-62272276 Msa0823580:intron 45.0%
AGCCACTACTAGCATCTCAT+TGG - chr5_3:62272401-62272420 None:intergenic 45.0%
!!! CTGATCCACTTTTTGGCACA+TGG + chr5_3:62272810-62272829 Msa0823580:intron 45.0%
CTATCCCATGTGCCAAAAAG+TGG - chr5_3:62272818-62272837 None:intergenic 45.0%
!! CACTTTTTGGCACATGGGAT+AGG + chr5_3:62272816-62272835 Msa0823580:intron 45.0%
AACAGGCAATGGCCATCTAT+TGG - chr5_3:62272937-62272956 None:intergenic 45.0%
GTGACCATGACAGACTAAGA+TGG + chr5_3:62273131-62273150 Msa0823580:intron 45.0%
GACATTTGCAGTGTGCTTTG+CGG + chr5_3:62274436-62274455 Msa0823580:intron 45.0%
AGAAGACGTTGGGAGCAAAA+CGG + chr5_3:62274470-62274489 Msa0823580:CDS 45.0%
! GCTTTTACACTCCCCGACAT+TGG + chr5_3:62269741-62269760 Msa0823580:CDS 50.0%
TGGCCTCCTTCTTCCAATGT+CGG - chr5_3:62269757-62269776 None:intergenic 50.0%
ACATTGGAAGAAGGAGGCCA+TGG + chr5_3:62269757-62269776 Msa0823580:CDS 50.0%
! TTTTGGTAGGGAGGAAGGAG+AGG - chr5_3:62269874-62269893 None:intergenic 50.0%
!! GAATGCAGGTTTTGGTAGGG+AGG - chr5_3:62269883-62269902 None:intergenic 50.0%
CTCGCAAATGGCGCAATCTT+TGG + chr5_3:62269921-62269940 Msa0823580:CDS 50.0%
GGAACTGTCGCAGAAATCCA+AGG - chr5_3:62269960-62269979 None:intergenic 50.0%
TGATCCACGTGTCAATCGAG+TGG - chr5_3:62270129-62270148 None:intergenic 50.0%
GAGTGAGATGAAACTCCTCG+AGG - chr5_3:62270171-62270190 None:intergenic 50.0%
CAAGGTTAGGGCAAGAGAAG+AGG - chr5_3:62270231-62270250 None:intergenic 50.0%
GCCTGAGAGAGACAAGGTTA+GGG - chr5_3:62270243-62270262 None:intergenic 50.0%
TGCCTGAGAGAGACAAGGTT+AGG - chr5_3:62270244-62270263 None:intergenic 50.0%
CGAAGTGTGGCCAAAGATTC+AGG - chr5_3:62270842-62270861 None:intergenic 50.0%
TGAAGATGACACCCGAAGTG+TGG - chr5_3:62270855-62270874 None:intergenic 50.0%
GATCAGGCGCGTCTATTTCA+AGG - chr5_3:62270925-62270944 None:intergenic 50.0%
TGACACGTAGCAGATGCCTT+TGG - chr5_3:62271695-62271714 None:intergenic 50.0%
CACTGAGCTGCATCATCTCA+AGG + chr5_3:62271725-62271744 Msa0823580:intron 50.0%
! AGGGGGTGCATTCAGTTAAC+TGG + chr5_3:62272053-62272072 Msa0823580:intron 50.0%
CTATCACCTTGCTGGGTGTA+TGG + chr5_3:62272256-62272275 Msa0823580:intron 50.0%
TTCTTCCCATACACCCAGCA+AGG - chr5_3:62272265-62272284 None:intergenic 50.0%
GTGAGAGTGAGAGAAAAGGC+AGG + chr5_3:62272314-62272333 Msa0823580:intron 50.0%
GAGTGAGAGAAAAGGCAGGT+TGG + chr5_3:62272318-62272337 Msa0823580:intron 50.0%
AGAGTGCAACAGAGCTGCAA+TGG - chr5_3:62272617-62272636 None:intergenic 50.0%
CTTGGCAGTTCTCCCTCATA+AGG - chr5_3:62272714-62272733 None:intergenic 50.0%
! ACATGGTCTTGGACCACACT+TGG - chr5_3:62272732-62272751 None:intergenic 50.0%
GTGGTCCAAGACCATGTCAT+TGG + chr5_3:62272735-62272754 Msa0823580:intron 50.0%
TTTGGCACATGGGATAGGGT+AGG + chr5_3:62272821-62272840 Msa0823580:intron 50.0%
ACACACTCACTGAGACCGAA+AGG - chr5_3:62273595-62273614 None:intergenic 50.0%
!! CAAAAGAGCACCCTGAAGCT+TGG + chr5_3:62274231-62274250 Msa0823580:intron 50.0%
CACTCCCCGACATTGGAAGA+AGG + chr5_3:62269748-62269767 Msa0823580:CDS 55.0%
TCCCCGACATTGGAAGAAGG+AGG + chr5_3:62269751-62269770 Msa0823580:CDS 55.0%
GCCTCCTTCTTCCAATGTCG+GGG - chr5_3:62269755-62269774 None:intergenic 55.0%
GGCCTCCTTCTTCCAATGTC+GGG - chr5_3:62269756-62269775 None:intergenic 55.0%
GTCAATGTCGTCATCGTCGG+AGG - chr5_3:62269813-62269832 None:intergenic 55.0%
!! GCAGGTTTTGGTAGGGAGGA+AGG - chr5_3:62269879-62269898 None:intergenic 55.0%
TTTGCGAGAAACGAGGGGTG+TGG - chr5_3:62269909-62269928 None:intergenic 55.0%
CACCCCTCGTTTCTCGCAAA+TGG + chr5_3:62269909-62269928 Msa0823580:CDS 55.0%
CGCCATTTGCGAGAAACGAG+GGG - chr5_3:62269914-62269933 None:intergenic 55.0%
GCGCCATTTGCGAGAAACGA+GGG - chr5_3:62269915-62269934 None:intergenic 55.0%
TGCGCCATTTGCGAGAAACG+AGG - chr5_3:62269916-62269935 None:intergenic 55.0%
TGCGAGATTTGCGGAGAGTG+AGG - chr5_3:62270051-62270070 None:intergenic 55.0%
ACGTGGATCAATGCCGCCAT+TGG + chr5_3:62270139-62270158 Msa0823580:CDS 55.0%
AACAGGCACCCTGTTGAAGC+CGG - chr5_3:62270206-62270225 None:intergenic 55.0%
GGGCAAGAGAAGAGGGAAAC+AGG - chr5_3:62270223-62270242 None:intergenic 55.0%
GCCCTAACCTTGTCTCTCTC+AGG + chr5_3:62270239-62270258 Msa0823580:CDS 55.0%
TTATCCCTGTTGGGGCGTGT+AGG - chr5_3:62270391-62270410 None:intergenic 55.0%
GTTTGTGACATGGGGATCCG+AGG + chr5_3:62270461-62270480 Msa0823580:intron 55.0%
GAACAGGACAGCCAGAGAGA+AGG - chr5_3:62270793-62270812 None:intergenic 55.0%
GCTCGGAGAAGACTGAGTAC+AGG - chr5_3:62271067-62271086 None:intergenic 55.0%
AGTCTTCTCCGAGCTCTCTC+TGG + chr5_3:62271073-62271092 Msa0823580:CDS 55.0%
CGCTAGAACAACAGGGGGAA+TGG + chr5_3:62271648-62271667 Msa0823580:CDS 55.0%
TGAGGGAGAACTGCCAAGTG+TGG + chr5_3:62272716-62272735 Msa0823580:intron 55.0%
TGTCACTCCCCAAGTCAGAG+AGG - chr5_3:62274291-62274310 None:intergenic 55.0%
GGAGGCCATGGATACTCCGA+TGG + chr5_3:62269769-62269788 Msa0823580:CDS 60.0%
GGCCATGGATACTCCGATGG+CGG + chr5_3:62269772-62269791 Msa0823580:CDS 60.0%
! CTCCGCCATCGGAGTATCCA+TGG - chr5_3:62269777-62269796 None:intergenic 60.0%
! CATGGATACTCCGATGGCGG+AGG + chr5_3:62269775-62269794 Msa0823580:CDS 60.0%
! GAGGGGTGTGGTACGAATGC+AGG - chr5_3:62269897-62269916 None:intergenic 60.0%
CTCGAGGTTTGGGCCAATGG+CGG - chr5_3:62270155-62270174 None:intergenic 60.0%
CTCCTCGAGGTTTGGGCCAA+TGG - chr5_3:62270158-62270177 None:intergenic 60.0%
GACACCTACACGCCCCAACA+GGG + chr5_3:62270384-62270403 Msa0823580:intron 60.0%
!! ATGGGGATCCGAGGAGTGTC+CGG + chr5_3:62270470-62270489 Msa0823580:intron 60.0%
GAGCACCCTGAAGCTTGGCA+CGG + chr5_3:62274236-62274255 Msa0823580:intron 60.0%
CACAGCCGTGCCAAGCTTCA+GGG - chr5_3:62274244-62274263 None:intergenic 60.0%
CCCAAGTCAGAGAGGAGGCA+CGG - chr5_3:62274283-62274302 None:intergenic 60.0%
CCGTGCCTCCTCTCTGACTT+GGG + chr5_3:62274280-62274299 Msa0823580:intron 60.0%
! CGTGCCTCCTCTCTGACTTG+GGG + chr5_3:62274281-62274300 Msa0823580:intron 60.0%
CACTCCCCAAGTCAGAGAGG+AGG - chr5_3:62274288-62274307 None:intergenic 60.0%
TCAGCACGTTCACGTGGCTC+TGG + chr5_3:62274514-62274533 Msa0823580:CDS 60.0%
!! GGATACTCCGATGGCGGAGG+CGG + chr5_3:62269778-62269797 Msa0823580:CDS 65.0%
CGCCATTGGCCCAAACCTCG+AGG + chr5_3:62270153-62270172 Msa0823580:CDS 65.0%
CTCACTCTGCTTACCGCCGC+CGG + chr5_3:62270184-62270203 Msa0823580:CDS 65.0%
!! TTACCGCCGCCGGCTTCAAC+AGG + chr5_3:62270194-62270213 Msa0823580:CDS 65.0%
!! TACCGCCGCCGGCTTCAACA+GGG + chr5_3:62270195-62270214 Msa0823580:CDS 65.0%
AGGCACCCTGTTGAAGCCGG+CGG - chr5_3:62270203-62270222 None:intergenic 65.0%
GGACACCTACACGCCCCAAC+AGG + chr5_3:62270383-62270402 Msa0823580:intron 65.0%
GCACAGCCGTGCCAAGCTTC+AGG - chr5_3:62274245-62274264 None:intergenic 65.0%
GCCGTGCCTCCTCTCTGACT+TGG + chr5_3:62274279-62274298 Msa0823580:intron 65.0%
GACTCTGCCGCCTCCGCCAT+CGG - chr5_3:62269788-62269807 None:intergenic 70.0%
CACCCTGTTGAAGCCGGCGG+CGG - chr5_3:62270200-62270219 None:intergenic 70.0%
GCTTGGCACGGCTGTGCTGC+TGG + chr5_3:62274248-62274267 Msa0823580:intron 70.0%
! TGGCACGGCTGTGCTGCTGG+TGG + chr5_3:62274251-62274270 Msa0823580:intron 70.0%
! CGGCTGTGCTGCTGGTGGCA+CGG + chr5_3:62274256-62274275 Msa0823580:intron 70.0%
! GGCTGTGCTGCTGGTGGCAC+GGG + chr5_3:62274257-62274276 Msa0823580:intron 70.0%
!! CGTTCACGTGGCTCTGGCCG+TGG + chr5_3:62274520-62274539 Msa0823580:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 62269728 62274837 62269728 ID=Msa0823580;Name=Msa0823580
chr5_3 mRNA 62269728 62274837 62269728 ID=Msa0823580-mRNA-1;Parent=Msa0823580;Name=Msa0823580-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.5|0.6|1|0.75|0.8|5|261|526
chr5_3 exon 62269728 62270317 62269728 ID=Msa0823580-mRNA-1:exon:19343;Parent=Msa0823580-mRNA-1
chr5_3 exon 62270676 62271132 62270676 ID=Msa0823580-mRNA-1:exon:19344;Parent=Msa0823580-mRNA-1
chr5_3 exon 62271232 62271381 62271232 ID=Msa0823580-mRNA-1:exon:19345;Parent=Msa0823580-mRNA-1
chr5_3 exon 62271455 62271708 62271455 ID=Msa0823580-mRNA-1:exon:19346;Parent=Msa0823580-mRNA-1
chr5_3 exon 62274447 62274837 62274447 ID=Msa0823580-mRNA-1:exon:19347;Parent=Msa0823580-mRNA-1
chr5_3 CDS 62269728 62270317 62269728 ID=Msa0823580-mRNA-1:cds;Parent=Msa0823580-mRNA-1
chr5_3 CDS 62270676 62271132 62270676 ID=Msa0823580-mRNA-1:cds;Parent=Msa0823580-mRNA-1
chr5_3 CDS 62271232 62271381 62271232 ID=Msa0823580-mRNA-1:cds;Parent=Msa0823580-mRNA-1
chr5_3 CDS 62271455 62271708 62271455 ID=Msa0823580-mRNA-1:cds;Parent=Msa0823580-mRNA-1
chr5_3 CDS 62274447 62274576 62274447 ID=Msa0823580-mRNA-1:cds;Parent=Msa0823580-mRNA-1
chr5_3 three_prime_UTR 62274577 62274837 62274577 ID=Msa0823580-mRNA-1:three_prime_utr;Parent=Msa0823580-mRNA-1
Gene Sequence

>Msa0823580

AAAAATAGTTTAAGCTTTTACACTCCCCGACATTGGAAGAAGGAGGCCATGGATACTCCGATGGCGGAGGCGGCAGAGTCAACCTCCGACGATGACGACATTGACAGAATAAACCAACTACCAAACTCCTTACTACATCACATCCTCTCCTTCCTCCCTACCAAAACCTGCATTCGTACCACACCCCTCGTTTCTCGCAAATGGCGCAATCTTTGGAAGAATCTCGAAGCCTTGGATTTCTGCGACAGTTCCAGCCCCGTAATTTATGAATTCGATAACGACGAACAGTTCTTGATCTTCTCCGTTTTCGTCAACACTGTCCTCACTCTCCGCAAATCTCGCATTGTTCGGAAGTTCCGTCTCTCATGCTATCACGTTCAACTCGATCCCTTCTATAACCACTCGATTGACACGTGGATCAATGCCGCCATTGGCCCAAACCTCGAGGAGTTTCATCTCACTCTGCTTACCGCCGCCGGCTTCAACAGGGTGCCTGTTTCCCTCTTCTCTTGCCCTAACCTTGTCTCTCTCAGGCAACAATTCCTTTCATCCTTTTTTTGTTTTTTTATCGTCAAATTCTCTATCATAGGTTTCAATGACTATATCATTCTGCAATTGCAAGACGATTCGGAGATTTGTTTACCGTCACTGAAGTTGCTGCAACTACTAGACATGTATAATTTGGATTTAAATTCTGTGAATGTCCTTCTCTCTGGCTGTCCTGTTCTCGAAAATCTGGAAATTTCTTTTGCTCCTGAATCTTTGGCCACACTTCGGGTGTCATCTTCAACCTTGAAGAGGTTAAAAATCAATGTTGAGAATGAGGTTGGGGCTTACCTTGAAATAGACGCGCCTGATCTCAAGTACCTTAGTCTCACCAATATCACGTTTCGTGATGCTGCTTCTGTTGGGAACTTGCACAATGTGGAAGAAGCACATCTAGATGTATTTTCCACTCCTGAAAGTGAATCTGTTGAACCTGTACTCAGTCTTCTCCGAGCTCTCTCTGGAATTAAACATCTAGAGCTGCTTAGTTTAACTACAAAGTGGCTATTTGCTGCCCCTGTCTTAGATTTTCCTGAATTTCGCCACTTGCTTTATATAGAGCTTTGGTTTCTCTCTGTCAACATAAGTTTTCTGATCGACATTCTTCAAAAATGTCCTGTGCTACAAACTCTCATAACATTCAACTACAAGATGCATCCATCATTTGATTCATCACCTTCATATGAATGGGAAGTGAAGCCGAAAAGTGTTCCTAAATGTCTTGTATCCCATTTGACCTTTATTGACCTTCGAGAATATCTCGGAAATTTAAATGAGCTGGAATTTACAAGCTATGTTTTGCAAAATGGACTTGTTTTGAAGACAATGCATATTCGCAGTTTTTCGCTAGAACAACAGGGGGAATGGTTGAAAAAAATCTCCGATCTACCAAAGGCATCTGCTACTGTGCTTTGCGGCTTTACTAAGAAGAAGACGTTGGGAGCAAAACGGAAGATTATGCATTTTTTAATTTCAGCACGTTCACGTGGCTCTGGCCGTGGCAGCTATTATGTTTGTTTCTTCGTGATTAGTTAG
Protein sequence

>Msa0823580

KNSLSFYTPRHWKKEAMDTPMAEAAESTSDDDDIDRINQLPNSLLHHILSFLPTKTCIRTTPLVSRKWRNLWKNLEALDFCDSSSPVIYEFDNDEQFLIFSVFVNTVLTLRKSRIVRKFRLSCYHVQLDPFYNHSIDTWINAAIGPNLEEFHLTLLTAAGFNRVPVSLFSCPNLVSLRQQFLSSFFCFFIVKFSIIGFNDYIILQLQDDSEICLPSLKLLQLLDMYNLDLNSVNVLLSGCPVLENLEISFAPESLATLRVSSSTLKRLKINVENEVGAYLEIDAPDLKYLSLTNITFRDAASVGNLHNVEEAHLDVFSTPESESVEPVLSLLRALSGIKHLELLSLTTKWLFAAPVLDFPEFRHLLYIELWFLSVNISFLIDILQKCPVLQTLITFNYKMHPSFDSSPSYEWEVKPKSVPKCLVSHLTFIDLREYLGNLNELEFTSYVLQNGLVLKTMHIRSFSLEQQGEWLKKISDLPKASATVLCGFTKKKTLGAKRKIMHFLISARSRGSGRGSYYVCFFVIS*