AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0827530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0827530 MtrunA17_Chr4g0037141 97.909 287 2 2 1 285 1 285 0.0 577
Msa0827530 MtrunA17_Chr3g0131121 48.973 292 125 4 1 269 1 291 8.17e-88 263
Msa0827530 MtrunA17_Chr8g0385321 83.721 129 21 0 1 129 1 129 1.37e-79 243
Msa0827530 MtrunA17_Chr5g0435101 72.800 125 34 0 3 127 2 126 6.20e-69 213
Msa0827530 MtrunA17_Chr2g0281071 72.868 129 34 1 1 128 1 129 5.70e-66 209
Msa0827530 MtrunA17_Chr2g0323411 72.656 128 35 0 1 128 1 128 1.14e-65 208
Msa0827530 MtrunA17_Chr4g0048511 72.093 129 35 1 1 128 1 129 2.59e-65 208
Msa0827530 MtrunA17_Chr4g0044421 53.552 183 81 2 3 184 2 181 4.35e-65 202
Msa0827530 MtrunA17_Chr7g0217741 67.424 132 43 0 1 132 1 132 9.14e-65 205
Msa0827530 MtrunA17_Chr5g0410961 66.906 139 46 0 1 139 1 139 9.61e-65 206
Msa0827530 MtrunA17_Chr4g0039971 67.969 128 41 0 1 128 2 129 1.06e-64 206
Msa0827530 MtrunA17_Chr7g0270891 53.039 181 80 1 1 176 1 181 1.35e-64 206
Msa0827530 MtrunA17_Chr3g0115821 63.636 132 48 0 1 132 1 132 2.06e-63 203
Msa0827530 MtrunA17_Chr7g0275911 73.950 119 31 0 1 119 1 119 2.38e-63 200
Msa0827530 MtrunA17_Chr4g0057031 67.176 131 43 0 1 131 1 131 7.39e-63 199
Msa0827530 MtrunA17_Chr8g0346561 75.000 116 29 0 1 116 1 116 1.42e-62 199
Msa0827530 MtrunA17_Chr5g0434571 57.576 165 60 3 1 156 37 200 2.14e-62 201
Msa0827530 MtrunA17_Chr4g0042671 52.151 186 84 1 1 181 1 186 2.92e-62 201
Msa0827530 MtrunA17_Chr1g0193371 49.231 195 97 1 1 193 1 195 3.19e-62 200
Msa0827530 MtrunA17_Chr3g0121241 68.000 125 40 0 5 129 35 159 7.94e-62 197
Msa0827530 MtrunA17_Chr6g0453471 54.601 163 69 1 1 158 1 163 8.15e-62 199
Msa0827530 MtrunA17_Chr8g0349261 51.323 189 87 3 1 184 1 189 9.37e-62 197
Msa0827530 MtrunA17_Chr3g0110351 61.871 139 53 0 1 139 1 139 8.65e-61 195
Msa0827530 MtrunA17_Chr4g0058631 53.012 166 66 1 1 166 1 154 1.04e-60 196
Msa0827530 MtrunA17_Chr4g0068061 59.355 155 57 1 1 149 1 155 2.51e-60 194
Msa0827530 MtrunA17_Chr1g0193801 62.879 132 49 0 1 132 1 132 2.70e-60 196
Msa0827530 MtrunA17_Chr1g0211161 63.780 127 46 0 3 129 4 130 3.27e-59 188
Msa0827530 MtrunA17_Chr1g0187761 61.111 144 55 1 1 144 1 143 4.44e-59 189
Msa0827530 MtrunA17_Chr3g0117091 62.791 129 48 0 1 129 1 129 6.73e-59 191
Msa0827530 MtrunA17_Chr4g0070611 71.552 116 33 0 1 116 1 116 7.30e-59 190
Msa0827530 MtrunA17_Chr6g0452271 60.606 132 52 0 1 132 1 132 7.96e-59 191
Msa0827530 MtrunA17_Chr4g0070641 71.552 116 33 0 1 116 1 116 8.74e-59 185
Msa0827530 MtrunA17_Chr3g0103281 61.364 132 51 0 1 132 1 132 9.48e-59 190
Msa0827530 MtrunA17_Chr7g0228891 50.867 173 80 1 1 168 1 173 1.40e-58 188
Msa0827530 MtrunA17_Chr5g0395281 62.500 128 48 0 1 128 1 128 5.67e-58 187
Msa0827530 MtrunA17_Chr1g0203411 67.241 116 38 0 1 116 1 116 1.90e-57 186
Msa0827530 MtrunA17_Chr1g0167661 68.644 118 37 0 1 118 1 118 2.17e-57 184
Msa0827530 MtrunA17_Chr7g0271241 64.885 131 46 0 1 131 1 131 3.73e-57 187
Msa0827530 MtrunA17_Chr1g0167691 69.231 117 36 0 1 117 1 117 6.73e-57 183
Msa0827530 MtrunA17_Chr7g0274581 65.517 116 40 0 1 116 1 116 2.23e-56 180
Msa0827530 MtrunA17_Chr2g0309911 49.701 167 77 1 6 172 5 164 4.71e-55 180
Msa0827530 MtrunA17_Chr7g0261281 67.241 116 38 0 1 116 1 116 6.78e-55 179
Msa0827530 MtrunA17_Chr8g0342521 60.484 124 49 0 1 124 1 124 7.95e-54 178
Msa0827530 MtrunA17_Chr1g0194951 62.500 128 48 0 1 128 1 128 1.28e-53 178
Msa0827530 MtrunA17_Chr2g0330041 60.000 125 50 0 1 125 1 125 2.07e-53 178
Msa0827530 MtrunA17_Chr4g0060721 49.432 176 80 4 1 170 2 174 4.83e-53 176
Msa0827530 MtrunA17_Chr7g0269831 63.910 133 47 1 1 132 1 133 5.90e-53 176
Msa0827530 MtrunA17_Chr8g0342541 59.677 124 50 0 1 124 1 124 6.40e-53 176
Msa0827530 MtrunA17_Chr3g0135311 61.667 120 45 1 1 119 1 120 5.07e-52 173
Msa0827530 MtrunA17_Chr1g0151941 48.276 174 85 3 1 173 1 170 7.95e-52 170
Msa0827530 MtrunA17_Chr7g0217221 62.931 116 43 0 1 116 1 116 1.09e-51 170
Msa0827530 MtrunA17_Chr3g0092401 63.793 116 42 0 1 116 2 117 1.23e-51 171
Msa0827530 MtrunA17_Chr2g0311221 68.182 110 35 0 2 111 4 113 1.78e-51 171
Msa0827530 MtrunA17_Chr8g0387421 48.256 172 83 2 1 166 1 172 1.86e-51 171
Msa0827530 MtrunA17_Chr7g0254411 61.111 126 47 1 1 124 1 126 2.52e-51 171
Msa0827530 MtrunA17_Chr5g0400821 47.561 164 80 2 1 163 1 159 7.04e-51 169
Msa0827530 MtrunA17_Chr4g0022881 63.158 114 42 0 1 114 1 114 1.47e-50 166
Msa0827530 MtrunA17_Chr4g0022891 54.930 142 60 1 1 138 1 142 2.06e-50 166
Msa0827530 MtrunA17_Chr1g0152011 60.833 120 46 1 1 119 1 120 2.09e-50 169
Msa0827530 MtrunA17_Chr5g0417821 51.613 155 73 1 14 168 9 161 2.30e-50 167
Msa0827530 MtrunA17_Chr4g0022931 46.821 173 76 4 1 172 1 158 5.35e-50 166
Msa0827530 MtrunA17_Chr8g0342481 57.600 125 52 1 1 124 1 125 9.09e-50 169
Msa0827530 MtrunA17_Chr2g0323351 62.393 117 44 0 1 117 1 117 9.33e-50 165
Msa0827530 MtrunA17_Chr5g0397231 62.727 110 41 0 1 110 1 110 4.82e-49 166
Msa0827530 MtrunA17_Chr4g0022901 59.664 119 47 1 1 118 1 119 5.62e-49 163
Msa0827530 MtrunA17_Chr4g0022911 58.824 119 48 1 1 118 1 119 8.99e-49 163
Msa0827530 MtrunA17_Chr4g0032401 48.256 172 73 3 14 173 19 186 1.20e-48 164
Msa0827530 MtrunA17_Chr4g0028311 58.475 118 48 1 1 117 1 118 3.55e-48 163
Msa0827530 MtrunA17_Chr6g0453211 62.162 111 42 0 1 111 1 111 4.21e-48 162
Msa0827530 MtrunA17_Chr7g0264641 56.780 118 50 1 1 117 1 118 5.41e-48 160
Msa0827530 MtrunA17_Chr2g0328771 65.714 105 36 0 14 118 22 126 7.28e-48 162
Msa0827530 MtrunA17_Chr4g0055981 64.486 107 38 0 9 115 52 158 1.21e-47 159
Msa0827530 MtrunA17_Chr2g0327351 62.162 111 41 1 1 110 1 111 1.45e-47 161
Msa0827530 MtrunA17_Chr4g0054391 61.818 110 41 1 1 109 1 110 8.95e-47 158
Msa0827530 MtrunA17_Chr8g0343831 61.207 116 41 1 1 116 1 112 1.21e-46 157
Msa0827530 MtrunA17_Chr3g0088461 62.037 108 41 0 9 116 19 126 3.90e-46 158
Msa0827530 MtrunA17_Chr4g0072751 62.162 111 41 1 1 110 1 111 1.83e-45 156
Msa0827530 MtrunA17_Chr7g0240821 43.069 202 99 4 16 210 5 197 4.87e-45 152
Msa0827530 MtrunA17_Chr1g0203441 54.688 128 56 2 1 127 1 127 1.05e-44 152
Msa0827530 MtrunA17_Chr7g0228231 45.506 178 82 2 14 189 16 180 1.66e-44 150
Msa0827530 MtrunA17_Chr6g0450101 60.169 118 45 1 1 116 1 118 3.58e-44 149
Msa0827530 MtrunA17_Chr6g0487491 53.968 126 49 2 1 117 1 126 6.94e-44 150
Msa0827530 MtrunA17_Chr6g0470971 52.713 129 60 1 7 135 9 136 1.93e-43 149
Msa0827530 MtrunA17_Chr1g0186061 59.091 110 45 0 6 115 14 123 6.36e-43 147
Msa0827530 MtrunA17_Chr7g0220341 46.835 158 73 3 14 161 27 183 8.86e-43 147
Msa0827530 MtrunA17_Chr7g0247131 54.545 121 52 1 44 161 10 130 9.49e-43 147
Msa0827530 MtrunA17_Chr1g0209661 55.200 125 56 0 8 132 23 147 1.30e-42 148
Msa0827530 MtrunA17_Chr1g0168661 62.857 105 39 0 14 118 23 127 1.47e-42 146
Msa0827530 MtrunA17_Chr8g0354661 63.725 102 37 0 14 115 39 140 1.52e-42 152
Msa0827530 MtrunA17_Chr5g0434931 58.333 108 45 0 14 121 37 144 3.85e-42 146
Msa0827530 MtrunA17_Chr5g0434911 55.752 113 50 0 7 119 16 128 8.35e-42 145
Msa0827530 MtrunA17_Chr3g0099131 60.377 106 42 0 10 115 39 144 5.96e-41 148
Msa0827530 MtrunA17_Chr3g0080861 60.784 102 40 0 14 115 39 140 1.51e-40 147
Msa0827530 MtrunA17_Chr7g0228991 59.434 106 43 0 14 119 31 136 2.40e-40 141
Msa0827530 MtrunA17_Chr1g0180391 62.136 103 39 0 14 116 21 123 2.72e-40 139
Msa0827530 MtrunA17_Chr1g0194291 65.657 99 34 0 14 112 23 121 3.46e-40 140
Msa0827530 MtrunA17_Chr5g0434831 58.491 106 44 0 14 119 9 114 3.93e-40 138
Msa0827530 MtrunA17_Chr5g0434841 59.434 106 43 0 14 119 22 127 1.20e-39 140
Msa0827530 MtrunA17_Chr2g0294811 64.130 92 33 0 1 92 1 92 3.22e-39 133
Msa0827530 MtrunA17_Chr1g0194301 58.824 102 42 0 14 115 35 136 4.87e-39 138
Msa0827530 MtrunA17_Chr8g0360111 60.606 99 39 0 14 112 27 125 6.12e-39 137
Msa0827530 MtrunA17_Chr4g0042611 64.773 88 31 0 1 88 1 88 2.65e-38 130
Msa0827530 MtrunA17_Chr2g0327821 46.667 135 67 2 14 145 8 140 4.73e-38 134
Msa0827530 MtrunA17_Chr1g0154031 56.863 102 44 0 14 115 78 179 3.38e-37 136
Msa0827530 MtrunA17_Chr8g0342511 63.218 87 32 0 1 87 1 87 6.93e-37 126
Msa0827530 MtrunA17_Chr1g0192411 51.261 119 52 1 14 126 14 132 1.48e-36 134
Msa0827530 MtrunA17_Chr2g0322521 61.765 102 39 0 14 115 31 132 1.98e-36 134
Msa0827530 MtrunA17_Chr8g0342531 49.138 116 54 1 1 111 1 116 3.07e-36 127
Msa0827530 MtrunA17_Chr4g0030881 53.153 111 45 1 12 115 7 117 9.01e-36 129
Msa0827530 MtrunA17_Chr8g0342461 61.111 90 34 1 1 89 1 90 1.06e-35 125
Msa0827530 MtrunA17_Chr5g0440781 47.015 134 67 3 12 142 12 144 1.16e-35 126
Msa0827530 MtrunA17_Chr2g0293911 63.366 101 37 0 14 114 26 126 1.28e-35 130
Msa0827530 MtrunA17_Chr4g0068921 61.386 101 39 0 14 114 26 126 1.54e-35 126
Msa0827530 MtrunA17_Chr8g0342471 61.111 90 34 1 1 89 1 90 3.10e-35 124
Msa0827530 MtrunA17_Chr5g0440761 47.015 134 67 3 12 142 12 144 5.60e-35 127
Msa0827530 MtrunA17_Chr5g0441141 47.015 134 67 3 12 142 12 144 7.06e-35 127
Msa0827530 MtrunA17_Chr2g0323321 60.870 92 35 1 1 92 1 91 2.10e-34 120
Msa0827530 MtrunA17_Chr5g0395221 60.227 88 35 0 1 88 1 88 4.96e-33 116
Msa0827530 MtrunA17_Chr7g0229101 68.571 70 22 0 44 113 4 73 1.97e-30 113
Msa0827530 MtrunA17_Chr8g0334881 47.222 108 56 1 8 114 6 113 4.64e-30 115
Msa0827530 MtrunA17_Chr5g0441131 49.038 104 52 1 12 114 9 112 8.88e-30 111
Msa0827530 MtrunA17_Chr4g0013361 39.716 141 81 3 8 147 6 143 1.66e-29 113
Msa0827530 MtrunA17_Chr3g0099141 52.874 87 41 0 8 94 36 122 2.05e-28 106
Msa0827530 MtrunA17_Chr3g0093811 50.562 89 44 0 44 132 14 102 6.99e-28 108
Msa0827530 MtrunA17_Chr7g0229131 58.108 74 31 0 44 117 4 77 9.05e-28 105
Msa0827530 MtrunA17_Chr5g0401731 46.552 116 61 1 14 129 15 129 2.15e-27 108
Msa0827530 MtrunA17_Chr5g0434901 66.667 66 22 0 48 113 9 74 2.30e-27 102
Msa0827530 MtrunA17_Chr7g0238631 38.037 163 87 4 14 167 113 270 2.55e-27 110
Msa0827530 MtrunA17_Chr5g0429661 37.107 159 89 4 14 169 122 272 3.56e-27 108
Msa0827530 MtrunA17_Chr6g0454921 50.000 102 50 1 14 115 15 115 8.51e-27 103
Msa0827530 MtrunA17_Chr4g0008551 49.123 114 51 3 14 126 38 145 1.32e-26 106
Msa0827530 MtrunA17_Chr3g0117511 47.500 120 58 3 3 119 170 287 1.00e-25 105
Msa0827530 MtrunA17_Chr4g0058991 48.598 107 52 2 14 119 209 313 1.86e-25 105
Msa0827530 MtrunA17_Chr4g0053431 49.020 102 51 1 14 115 5 105 2.96e-25 101
Msa0827530 MtrunA17_Chr5g0425591 50.602 83 40 1 12 93 9 91 4.70e-24 93.2
Msa0827530 MtrunA17_Chr7g0228531 49.091 110 51 3 14 120 220 327 6.98e-24 100
Msa0827530 MtrunA17_Chr6g0480581 38.849 139 74 5 14 145 4 138 1.52e-23 96.3
Msa0827530 MtrunA17_Chr3g0133601 47.059 102 53 1 14 115 37 137 1.89e-23 95.5
Msa0827530 MtrunA17_Chr1g0157731 42.718 103 58 1 14 116 91 192 3.44e-23 99.4
Msa0827530 MtrunA17_Chr5g0437321 44.340 106 56 2 8 112 13 116 7.26e-23 95.5
Msa0827530 MtrunA17_Chr5g0417621 42.241 116 59 3 2 116 127 235 1.55e-22 96.7
Msa0827530 MtrunA17_Chr3g0139671 40.385 104 59 2 14 116 85 186 4.84e-22 95.9
Msa0827530 MtrunA17_Chr4g0042501 40.870 115 60 3 2 115 98 205 6.87e-22 94.7
Msa0827530 MtrunA17_Chr5g0397841 47.917 96 49 1 14 109 110 204 9.75e-22 94.4
Msa0827530 MtrunA17_Chr5g0397841 33.621 116 70 3 4 112 41 156 6.62e-12 65.5
Msa0827530 MtrunA17_Chr6g0460661 41.237 97 56 1 14 110 16 111 7.99e-21 87.0
Msa0827530 MtrunA17_Chr7g0228401 45.192 104 49 3 25 128 290 385 8.26e-21 92.0
Msa0827530 MtrunA17_Chr1g0177901 46.067 89 47 1 25 113 5 92 2.13e-20 87.0
Msa0827530 MtrunA17_Chr3g0145551 69.231 52 16 0 91 142 1 52 2.52e-20 83.2
Msa0827530 MtrunA17_Chr6g0453751 46.067 89 39 2 14 93 22 110 5.01e-20 84.0
Msa0827530 MtrunA17_Chr3g0125801 46.602 103 52 2 14 115 16 116 6.76e-20 87.4
Msa0827530 MtrunA17_Chr7g0233061 41.509 106 55 2 10 113 176 276 1.87e-19 87.0
Msa0827530 MtrunA17_Chr7g0228481 42.727 110 58 3 14 120 220 327 3.82e-19 86.7
Msa0827530 MtrunA17_Chr6g0460671 42.157 102 58 1 14 115 99 199 7.72e-19 85.1
Msa0827530 MtrunA17_Chr7g0238651 37.391 115 64 2 17 123 10 124 1.42e-18 84.7
Msa0827530 MtrunA17_Chr7g0254261 38.793 116 63 3 1 115 81 189 1.59e-17 81.6
Msa0827530 MtrunA17_Chr5g0416341 37.374 99 61 1 17 115 29 126 5.64e-16 77.8
Msa0827530 MtrunA17_Chr5g0434871 60.000 45 18 0 74 118 2 46 1.35e-15 70.1
Msa0827530 MtrunA17_Chr8g0362231 35.714 112 70 2 16 127 24 133 4.21e-15 75.1
Msa0827530 MtrunA17_Chr1g0193901 53.846 52 24 0 17 68 17 68 9.91e-15 68.9
Msa0827530 MtrunA17_Chr1g0193891 53.846 52 24 0 17 68 17 68 9.91e-15 68.9
Msa0827530 MtrunA17_Chr1g0193871 53.846 52 24 0 17 68 17 68 9.91e-15 68.9
Msa0827530 MtrunA17_Chr1g0193881 53.846 52 24 0 17 68 17 68 9.91e-15 68.9
Msa0827530 MtrunA17_Chr5g0395231 52.941 51 24 0 78 128 5 55 3.20e-14 70.9
Msa0827530 MtrunA17_Chr4g0042621 58.491 53 22 0 88 140 14 66 6.73e-14 70.9
Msa0827530 MtrunA17_Chr2g0322831 61.538 39 15 0 70 108 34 72 2.86e-13 63.9
Msa0827530 MtrunA17_Chr5g0434891 59.091 44 18 0 77 120 1 44 5.70e-13 65.1
Msa0827530 MtrunA17_Chr7g0247141 54.167 48 21 1 1 47 1 48 1.05e-12 62.0
Msa0827530 MtrunA17_Chr7g0233151 50.847 59 26 1 65 120 1 59 1.07e-12 65.1
Msa0827530 MtrunA17_Chr4g0024181 58.537 41 17 0 70 110 28 68 3.57e-12 60.8
Msa0827530 MtrunA17_Chr3g0104491 38.806 67 37 1 53 115 1 67 1.52e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0827530 AT4G38620.1 59.259 297 94 9 1 285 1 282 9.41e-111 322
Msa0827530 AT4G34990.1 55.743 296 98 7 1 285 1 274 1.94e-102 300
Msa0827530 AT2G16720.1 51.525 295 107 5 1 285 1 269 4.95e-97 286
Msa0827530 AT4G09460.1 61.111 216 68 4 1 213 1 203 1.84e-87 261
Msa0827530 AT1G22640.1 54.331 254 101 3 1 247 1 246 4.11e-87 261
Msa0827530 AT1G35515.1 60.804 199 77 1 1 198 1 199 2.89e-83 249
Msa0827530 AT5G16770.4 75.781 128 31 0 1 128 1 128 8.93e-71 221
Msa0827530 AT5G16770.3 75.781 128 31 0 1 128 1 128 8.93e-71 221
Msa0827530 AT5G16770.1 75.781 128 31 0 1 128 1 128 1.61e-70 221
Msa0827530 AT5G16770.2 75.781 128 31 0 1 128 1 128 1.61e-70 221
Msa0827530 AT3G02940.2 75.000 128 32 0 1 128 1 128 1.37e-69 218
Msa0827530 AT3G02940.1 75.000 128 32 0 1 128 1 128 2.98e-69 217
Msa0827530 AT3G02940.3 75.000 128 32 0 1 128 1 128 2.98e-69 217
Msa0827530 AT4G28110.1 71.875 128 36 0 1 128 1 128 2.92e-67 211
Msa0827530 AT4G21440.1 72.656 128 35 0 1 128 1 128 3.27e-67 213
Msa0827530 AT4G05100.1 72.868 129 34 1 1 128 1 129 3.39e-66 209
Msa0827530 AT3G61250.1 48.469 196 96 2 1 195 1 192 8.46e-65 205
Msa0827530 AT3G01140.2 58.385 161 64 1 1 158 1 161 1.96e-64 206
Msa0827530 AT3G13540.1 69.291 127 39 0 4 130 15 141 2.22e-64 202
Msa0827530 AT5G15310.4 52.356 191 84 2 1 188 1 187 6.68e-64 201
Msa0827530 AT4G12350.1 58.491 159 61 1 1 154 1 159 9.92e-64 202
Msa0827530 AT5G15310.2 52.356 191 84 2 1 188 1 187 1.36e-63 202
Msa0827530 AT5G15310.1 52.356 191 84 2 1 188 1 187 1.40e-63 203
Msa0827530 AT5G07690.1 63.121 141 52 0 1 141 1 141 5.16e-63 202
Msa0827530 AT1G57560.2 62.500 144 54 0 1 144 1 144 5.35e-63 200
Msa0827530 AT1G57560.1 63.309 139 51 0 1 139 1 139 6.11e-63 201
Msa0827530 AT5G61420.2 50.276 181 87 1 1 181 1 178 1.13e-62 202
Msa0827530 AT4G22680.1 63.830 141 51 0 1 141 1 141 1.37e-62 198
Msa0827530 AT1G09540.1 65.909 132 45 0 1 132 1 132 3.94e-62 201
Msa0827530 AT4G17785.2 62.000 150 55 2 1 148 1 150 6.56e-62 199
Msa0827530 AT4G17785.1 62.000 150 55 2 1 148 1 150 6.82e-62 199
Msa0827530 AT5G26660.1 56.707 164 60 2 1 162 1 155 1.06e-61 199
Msa0827530 AT5G10280.1 57.143 147 63 0 1 147 1 147 1.57e-61 198
Msa0827530 AT5G16600.1 62.759 145 53 1 1 144 1 145 1.92e-61 197
Msa0827530 AT5G60890.1 62.222 135 51 0 1 135 1 135 2.12e-61 196
Msa0827530 AT1G34670.1 63.043 138 51 0 1 138 1 138 2.98e-61 198
Msa0827530 AT3G01140.1 57.595 158 64 1 4 158 47 204 3.14e-61 199
Msa0827530 AT5G14340.1 59.859 142 57 0 1 142 13 154 7.99e-61 194
Msa0827530 AT1G66230.1 61.594 138 53 0 1 138 1 138 2.05e-60 193
Msa0827530 AT5G65230.1 64.062 128 46 0 1 128 1 128 2.90e-60 194
Msa0827530 AT4G01680.3 63.636 132 48 0 1 132 1 132 1.33e-59 190
Msa0827530 AT5G56110.1 62.879 132 49 0 1 132 1 132 1.66e-59 192
Msa0827530 AT5G62320.1 53.757 173 64 3 2 162 3 171 1.80e-59 190
Msa0827530 AT1G18570.1 58.553 152 61 2 1 150 1 152 1.99e-59 193
Msa0827530 AT4G01680.1 63.636 132 48 0 1 132 1 132 7.79e-59 191
Msa0827530 AT5G07700.1 51.765 170 78 1 1 170 1 166 1.04e-58 191
Msa0827530 AT5G07700.2 51.765 170 78 1 1 170 1 166 1.04e-58 191
Msa0827530 AT2G47460.1 64.748 139 49 0 1 139 1 139 1.39e-58 191
Msa0827530 AT5G54230.1 67.969 128 41 0 1 128 1 128 2.09e-58 189
Msa0827530 AT5G49330.1 73.276 116 31 0 1 116 1 116 2.43e-58 190
Msa0827530 AT1G74080.1 62.791 129 48 0 1 129 1 129 5.48e-58 189
Msa0827530 AT3G23250.1 46.766 201 103 3 1 200 1 198 2.51e-57 186
Msa0827530 AT2G31180.1 47.739 199 88 2 1 183 1 199 1.02e-56 183
Msa0827530 AT4G01680.2 58.333 144 48 1 1 132 1 144 2.30e-55 182
Msa0827530 AT3G62610.1 70.690 116 34 0 1 116 1 116 3.17e-55 182
Msa0827530 AT1G06180.1 68.966 116 36 0 1 116 1 116 4.75e-55 178
Msa0827530 AT1G16490.1 57.047 149 60 2 2 146 4 152 5.20e-55 179
Msa0827530 AT3G12720.1 61.983 121 46 0 6 126 16 136 1.35e-54 179
Msa0827530 AT1G79180.1 68.696 115 36 0 2 116 4 118 1.45e-54 179
Msa0827530 AT1G74650.1 64.957 117 41 0 1 117 1 117 2.55e-53 177
Msa0827530 AT3G13890.2 63.248 117 43 0 1 117 1 117 3.65e-53 177
Msa0827530 AT3G28470.1 56.818 132 57 0 1 132 1 132 3.96e-53 176
Msa0827530 AT1G56160.1 65.217 115 40 0 2 116 4 118 2.04e-52 173
Msa0827530 AT5G62470.2 57.857 140 57 1 1 140 1 138 5.06e-52 174
Msa0827530 AT1G08810.1 65.517 116 40 0 1 116 1 116 1.08e-51 171
Msa0827530 AT3G12820.1 64.103 117 42 0 3 119 5 121 1.28e-51 169
Msa0827530 AT3G47600.1 47.872 188 85 3 1 175 1 188 2.20e-51 172
Msa0827530 AT1G74430.1 57.143 133 57 0 1 133 1 133 1.02e-50 168
Msa0827530 AT5G62470.1 57.857 140 56 2 1 140 1 137 1.24e-50 170
Msa0827530 AT4G37780.1 42.254 213 96 5 1 187 1 212 1.98e-50 168
Msa0827530 AT3G28910.1 62.069 116 44 0 1 116 1 116 2.69e-50 169
Msa0827530 AT3G13890.1 58.730 126 43 1 1 117 1 126 4.56e-50 169
Msa0827530 AT1G63910.1 56.250 128 56 0 1 128 1 128 6.25e-50 169
Msa0827530 AT5G14750.1 66.990 103 34 0 14 116 18 120 2.81e-49 162
Msa0827530 AT5G57620.1 59.167 120 48 1 1 119 1 120 4.44e-49 166
Msa0827530 AT5G65790.1 59.167 120 48 1 1 119 1 120 8.52e-49 166
Msa0827530 AT3G49690.1 58.333 120 49 1 1 119 1 120 1.89e-48 163
Msa0827530 AT5G23000.1 59.322 118 47 1 1 117 1 118 2.81e-48 164
Msa0827530 AT5G40330.1 65.049 103 36 0 14 116 14 116 5.76e-48 159
Msa0827530 AT5G35550.1 69.231 104 32 0 13 116 15 118 6.30e-48 160
Msa0827530 AT1G79180.2 53.378 148 36 1 2 116 4 151 9.10e-48 162
Msa0827530 AT1G18710.1 54.264 129 59 0 1 129 1 129 1.42e-47 160
Msa0827530 AT3G01530.1 50.943 159 73 1 8 166 21 174 1.96e-47 157
Msa0827530 AT5G12870.1 65.049 103 36 0 14 116 20 122 2.94e-47 159
Msa0827530 AT2G36890.1 55.118 127 56 1 1 126 1 127 8.69e-47 159
Msa0827530 AT2G36890.2 55.118 127 56 1 1 126 42 168 1.52e-46 159
Msa0827530 AT3G27920.1 60.000 110 44 0 8 117 10 119 2.49e-46 155
Msa0827530 AT3G08500.1 34.202 307 164 7 9 282 27 328 2.62e-46 159
Msa0827530 AT5G52600.1 42.222 180 91 2 9 175 9 188 2.81e-45 152
Msa0827530 AT1G22640.3 45.178 197 93 3 58 247 1 189 4.02e-45 151
Msa0827530 AT5G40350.1 46.243 173 79 1 10 182 15 173 2.17e-44 150
Msa0827530 AT3G27810.1 46.707 167 86 1 9 175 17 180 1.01e-43 149
Msa0827530 AT2G26960.1 44.643 168 78 2 9 161 17 184 7.44e-43 152
Msa0827530 AT4G13480.1 65.686 102 35 0 14 115 8 109 1.06e-42 147
Msa0827530 AT4G26930.1 50.340 147 66 2 14 160 21 160 1.10e-42 150
Msa0827530 AT3G30210.1 43.889 180 86 3 14 178 29 208 3.80e-42 146
Msa0827530 AT2G32460.2 62.745 102 38 0 14 115 8 109 4.53e-42 150
Msa0827530 AT2G32460.1 62.745 102 38 0 14 115 20 121 5.12e-42 150
Msa0827530 AT5G55020.1 61.111 108 41 1 14 121 28 134 7.93e-42 151
Msa0827530 AT5G06100.1 59.804 102 41 0 14 115 34 135 1.44e-41 149
Msa0827530 AT3G24310.1 63.725 102 37 0 14 115 20 121 2.38e-41 144
Msa0827530 AT4G25560.1 61.538 104 40 0 14 117 12 115 3.74e-41 144
Msa0827530 AT5G26660.2 57.500 120 40 2 45 162 14 124 4.97e-41 144
Msa0827530 AT5G06100.5 59.804 102 41 0 14 115 34 135 5.68e-41 148
Msa0827530 AT5G06100.2 59.804 102 41 0 14 115 34 135 5.68e-41 148
Msa0827530 AT5G06100.3 59.804 102 41 0 14 115 34 135 5.68e-41 148
Msa0827530 AT5G06100.4 59.804 102 41 0 14 115 34 135 5.68e-41 148
Msa0827530 AT3G11440.2 59.804 102 41 0 14 115 43 144 7.24e-41 147
Msa0827530 AT1G25340.1 53.600 125 58 0 8 132 14 138 1.80e-40 142
Msa0827530 AT2G47190.1 56.481 108 47 0 8 115 16 123 2.32e-40 141
Msa0827530 AT3G11440.3 59.804 102 41 0 14 115 43 144 3.43e-40 147
Msa0827530 AT3G11440.4 59.804 102 41 0 14 115 43 144 3.43e-40 147
Msa0827530 AT3G11440.1 59.804 102 41 0 14 115 43 144 3.43e-40 147
Msa0827530 AT3G48920.1 55.660 106 47 0 9 114 15 120 7.84e-40 140
Msa0827530 AT1G48000.1 61.321 106 39 1 14 117 34 139 8.36e-40 139
Msa0827530 AT5G52260.1 58.974 117 48 0 1 117 1 117 8.60e-40 140
Msa0827530 AT1G66370.1 56.522 115 46 1 1 115 1 111 6.10e-39 137
Msa0827530 AT3G53200.1 61.765 102 39 0 14 115 11 112 1.35e-38 136
Msa0827530 AT1G68320.1 52.941 119 56 0 14 132 21 139 5.79e-38 135
Msa0827530 AT5G59780.3 55.882 102 45 0 14 115 10 111 1.80e-36 130
Msa0827530 AT3G46130.1 55.882 102 45 0 14 115 11 112 1.97e-36 130
Msa0827530 AT5G14750.3 72.727 77 18 1 40 116 13 86 3.11e-36 127
Msa0827530 AT1G25340.2 51.200 125 56 1 8 132 14 133 3.13e-36 130
Msa0827530 AT1G66380.1 62.745 102 38 0 14 115 10 111 4.25e-36 126
Msa0827530 AT1G25340.3 51.200 125 56 1 8 132 14 133 6.20e-36 130
Msa0827530 AT3G06490.1 63.366 101 37 0 14 114 21 121 9.80e-36 130
Msa0827530 AT5G49620.1 60.748 107 42 0 8 114 22 128 1.19e-35 130
Msa0827530 AT1G56650.1 61.765 102 39 0 14 115 10 111 7.46e-35 126
Msa0827530 AT1G66390.1 61.765 102 39 0 14 115 10 111 3.95e-34 124
Msa0827530 AT5G35550.2 71.429 77 22 0 40 116 45 121 4.45e-34 125
Msa0827530 AT3G12820.2 71.233 73 21 0 47 119 1 73 9.64e-33 119
Msa0827530 AT5G49620.2 53.719 121 42 1 8 114 22 142 5.95e-32 120
Msa0827530 AT1G71030.2 63.636 77 28 0 51 127 5 81 2.09e-31 115
Msa0827530 AT1G71030.1 57.778 90 37 1 38 127 7 95 2.41e-31 115
Msa0827530 AT2G26950.1 48.148 108 55 1 14 121 18 124 6.50e-31 119
Msa0827530 AT3G47600.2 45.139 144 66 3 45 175 39 182 1.62e-30 117
Msa0827530 AT3G53200.2 70.423 71 21 0 45 115 9 79 8.11e-30 112
Msa0827530 AT3G09230.1 51.376 109 44 2 14 118 55 158 2.84e-29 115
Msa0827530 AT3G27810.2 44.275 131 70 1 45 175 4 131 3.11e-29 109
Msa0827530 AT5G40350.2 42.754 138 65 1 45 182 5 128 3.95e-29 109
Msa0827530 AT3G60460.1 46.789 109 57 1 7 114 6 114 4.08e-29 112
Msa0827530 AT1G18960.1 44.361 133 65 5 1 132 1 125 4.24e-29 112
Msa0827530 AT3G46130.3 64.384 73 26 0 43 115 8 80 1.79e-28 109
Msa0827530 AT5G59780.2 66.197 71 24 0 45 115 20 90 4.50e-28 107
Msa0827530 AT3G46130.4 66.197 71 24 0 45 115 20 90 5.28e-28 108
Msa0827530 AT3G27785.1 49.074 108 54 1 8 115 183 289 3.38e-27 110
Msa0827530 AT5G40360.1 46.535 101 53 1 14 114 158 257 4.71e-27 108
Msa0827530 AT4G18770.1 47.009 117 57 2 14 128 217 330 8.22e-27 108
Msa0827530 AT5G58850.1 49.515 103 49 2 14 115 105 205 1.51e-26 108
Msa0827530 AT5G14750.4 71.186 59 17 0 58 116 1 59 1.61e-26 101
Msa0827530 AT5G14750.2 71.186 59 17 0 58 116 1 59 1.61e-26 101
Msa0827530 AT1G66380.3 63.636 77 28 0 39 115 2 78 5.20e-26 99.4
Msa0827530 AT2G23290.1 50.980 102 49 1 14 115 13 113 6.14e-26 104
Msa0827530 AT3G55730.1 52.427 103 46 2 14 115 56 156 6.62e-26 105
Msa0827530 AT2G39880.1 49.057 106 45 2 14 115 50 150 9.18e-26 105
Msa0827530 AT4G37260.1 49.020 102 51 1 14 115 13 113 1.13e-25 103
Msa0827530 AT5G11050.1 47.573 103 51 2 14 115 105 205 3.74e-25 103
Msa0827530 AT5G67300.1 37.662 154 91 3 14 163 6 158 5.94e-25 101
Msa0827530 AT3G23250.2 52.381 84 38 1 58 141 1 82 9.46e-25 99.4
Msa0827530 AT5G02320.1 43.689 103 57 1 14 116 127 228 1.49e-24 103
Msa0827530 AT5G02320.2 43.689 103 57 1 14 116 127 228 1.49e-24 103
Msa0827530 AT1G69560.2 44.954 109 57 2 9 116 118 224 1.91e-24 101
Msa0827530 AT5G02320.3 43.689 103 57 1 14 116 67 168 1.94e-24 102
Msa0827530 AT1G69560.1 44.954 109 57 2 9 116 102 208 2.05e-24 100
Msa0827530 AT3G50060.1 44.340 106 58 1 10 115 2 106 3.64e-24 99.8
Msa0827530 AT2G25230.1 41.880 117 67 1 4 120 16 131 3.64e-23 95.5
Msa0827530 AT3G09370.2 37.576 165 82 5 14 169 135 287 4.97e-23 98.6
Msa0827530 AT3G09370.3 37.576 165 82 5 14 169 143 295 5.06e-23 99.0
Msa0827530 AT3G09370.1 37.576 165 82 5 14 169 130 282 5.32e-23 98.6
Msa0827530 AT1G26780.1 45.631 103 53 2 14 115 98 198 1.24e-22 95.1
Msa0827530 AT1G22640.2 35.329 167 93 3 88 247 16 174 2.11e-22 92.0
Msa0827530 AT1G26780.2 45.631 103 53 2 14 115 98 198 2.26e-22 95.5
Msa0827530 AT5G11510.3 41.905 105 56 2 14 116 81 182 2.28e-22 97.4
Msa0827530 AT5G11510.3 34.314 102 65 2 12 112 27 127 2.43e-11 64.7
Msa0827530 AT5G11510.1 41.905 105 56 2 14 116 81 182 2.28e-22 97.4
Msa0827530 AT5G11510.1 34.314 102 65 2 12 112 27 127 2.43e-11 64.7
Msa0827530 AT5G11510.4 41.905 105 56 2 14 116 81 182 2.28e-22 97.4
Msa0827530 AT5G11510.4 34.314 102 65 2 12 112 27 127 2.43e-11 64.7
Msa0827530 AT5G11510.2 41.905 105 56 2 14 116 81 182 2.88e-22 97.1
Msa0827530 AT5G11510.2 34.314 102 65 2 12 112 27 127 2.06e-11 64.7
Msa0827530 AT5G11510.5 41.905 105 56 2 14 116 81 182 3.37e-22 96.7
Msa0827530 AT5G11510.5 34.314 102 65 2 12 112 27 127 2.23e-11 64.7
Msa0827530 AT4G32730.1 40.777 103 60 1 14 116 87 188 3.79e-22 96.7
Msa0827530 AT1G17950.1 42.241 116 60 3 14 128 5 114 3.84e-22 92.8
Msa0827530 AT4G32730.5 40.777 103 60 1 14 116 87 188 3.90e-22 96.7
Msa0827530 AT4G32730.4 40.777 103 60 1 14 116 87 188 3.90e-22 96.7
Msa0827530 AT4G32730.3 40.777 103 60 1 14 116 87 188 3.90e-22 96.7
Msa0827530 AT4G32730.2 40.777 103 60 1 14 116 87 188 3.90e-22 96.7
Msa0827530 AT4G33450.1 38.938 113 63 2 3 115 13 119 2.55e-21 90.9
Msa0827530 AT3G29020.2 38.462 104 63 1 13 116 66 168 1.61e-20 89.7
Msa0827530 AT3G29020.1 38.835 103 62 1 14 116 65 166 1.64e-20 88.2
Msa0827530 AT1G66380.2 55.696 79 35 0 14 92 10 88 8.17e-20 83.2
Msa0827530 AT1G73410.1 43.689 103 55 2 14 115 6 106 1.78e-19 85.5
Msa0827530 AT5G61420.1 40.594 101 57 1 81 181 2 99 1.90e-19 86.3
Msa0827530 AT5G17800.1 42.157 102 58 1 14 115 93 193 2.43e-19 86.7
Msa0827530 AT1G73410.2 43.269 104 56 2 13 115 5 106 3.10e-19 84.0
Msa0827530 AT5G40430.1 36.937 111 68 1 4 114 44 152 2.85e-18 82.4
Msa0827530 AT4G00540.2 40.952 105 60 1 14 116 103 207 8.83e-18 83.2
Msa0827530 AT4G00540.1 40.952 105 60 1 14 116 101 205 1.53e-17 82.4
Msa0827530 AT5G39700.1 34.615 130 79 2 15 144 57 180 3.75e-17 78.2
Msa0827530 AT2G37630.1 41.667 96 54 1 17 110 7 102 6.74e-17 80.1
Msa0827530 AT4G28110.2 73.171 41 11 0 88 128 4 44 3.81e-16 75.5
Msa0827530 AT5G14340.2 50.909 55 27 0 88 142 10 64 3.96e-15 72.4
Msa0827530 AT5G15310.3 61.224 49 19 0 84 132 5 53 4.09e-15 73.6
Msa0827530 AT2G02820.1 37.000 100 62 1 16 115 32 130 6.92e-15 74.7
Msa0827530 AT2G02820.2 37.000 100 62 1 16 115 32 130 7.87e-15 74.7
Msa0827530 AT2G02820.3 37.000 100 62 1 16 115 32 130 1.00e-14 73.6
Msa0827530 AT1G14350.2 36.364 99 62 1 17 115 28 125 2.50e-14 73.2
Msa0827530 AT1G14350.1 36.364 99 62 1 17 115 28 125 2.50e-14 73.2
Msa0827530 AT4G25560.2 66.667 45 15 0 73 117 5 49 2.52e-14 70.9
Msa0827530 AT5G59780.1 60.870 46 18 0 70 115 1 46 8.03e-14 68.6
Msa0827530 AT3G46130.2 60.870 46 18 0 70 115 1 46 9.50e-14 68.9
Msa0827530 AT1G74650.3 63.415 41 15 0 77 117 1 41 3.28e-12 65.5
Msa0827530 AT3G28910.2 50.000 54 25 1 77 130 1 52 4.78e-12 65.1
Msa0827530 AT3G18100.4 37.113 97 60 1 12 108 383 478 5.08e-11 63.5
Msa0827530 AT3G18100.2 37.113 97 60 1 12 108 331 426 5.77e-11 63.2
Msa0827530 AT3G18100.1 37.113 97 60 1 12 108 544 639 6.28e-11 63.2
Msa0827530 AT3G18100.3 37.113 97 60 1 12 108 496 591 6.77e-11 63.2
Msa0827530 AT1G74430.2 42.105 57 33 0 77 133 8 64 9.71e-11 60.5

Find 74 sgRNAs with CRISPR-Local

Find 193 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATGAGAAACTTCGTTTAA+AGG 0.146777 5_3:-68827066 None:intergenic
CTGTGAAGTTACCACGTTTA+AGG 0.167024 5_3:-68826641 None:intergenic
ATAGACTTATATCATATATT+AGG 0.189971 5_3:+68826517 Msa0827530:CDS
TGCACCTGCTTATGATTTCT+TGG 0.191888 5_3:+68827473 Msa0827530:CDS
CGGAGTAAGCCAGCTGCTTT+AGG 0.231555 5_3:-68826570 None:intergenic
CAAGTTACTTAACTCAAATA+TGG 0.240667 5_3:+68826431 Msa0827530:exon
TGGGTTTGAAAGGTGGTGTT+TGG 0.257123 5_3:+68827493 Msa0827530:CDS
AGAGAGGTATTCAAAATTAA+TGG 0.258548 5_3:-68827587 None:intergenic
ATAATGAGATAAAGAATTAT+TGG 0.265414 5_3:+68826986 Msa0827530:CDS
ATGAATACAAACATGGTTAA+AGG 0.266526 5_3:+68827255 Msa0827530:CDS
ATCAAACTCCATAGTCTTCT+TGG 0.271142 5_3:+68826684 Msa0827530:CDS
TCAGTATAGCTGAACATTAT+TGG 0.277682 5_3:+68827677 Msa0827530:three_prime_UTR
ATGATATTGTTCTTGTTTGA+TGG 0.288712 5_3:-68827217 None:intergenic
ATCTCATTATCTGTTCTTCC+AGG 0.316676 5_3:-68826973 None:intergenic
GGGTTTGAAAGGTGGTGTTT+GGG 0.359186 5_3:+68827494 Msa0827530:CDS
ACTTGTTACCAAGAAGACTA+TGG 0.391300 5_3:-68826692 None:intergenic
GCACCTGCTTATGATTTCTT+GGG 0.393603 5_3:+68827474 Msa0827530:CDS
GGAGTAAGCCAGCTGCTTTA+GGG 0.400092 5_3:-68826569 None:intergenic
GGGCACATGGTGAAGGTTGT+TGG 0.403016 5_3:+68826538 Msa0827530:CDS
ATAATCATAACAAAATTAAC+AGG 0.407713 5_3:-68827765 None:intergenic
GGAAATTCTAGCAGTGGAAA+TGG 0.412132 5_3:+68827444 Msa0827530:CDS
GTTAGCTCAAGATTCAAATC+AGG 0.414650 5_3:-68827297 None:intergenic
AGTTGAGGTATGATTATATA+GGG 0.419143 5_3:-68826294 None:intergenic
TAGACTTATATCATATATTA+GGG 0.419668 5_3:+68826518 Msa0827530:CDS
TTTGGGTTTGCAGAATAGTA+AGG 0.428430 5_3:+68827398 Msa0827530:CDS
TGAATACAAACATGGTTAAA+GGG 0.438627 5_3:+68827256 Msa0827530:CDS
TTTAGATGGTCTTTGATAGC+TGG 0.445911 5_3:+68826943 Msa0827530:intron
AAGTTGAGGTATGATTATAT+AGG 0.446918 5_3:-68826295 None:intergenic
TTAAAGAGAGTGGCTGTTGT+TGG 0.452854 5_3:-68826172 None:intergenic
CAAAAGATATAGTTGTTGGT+AGG 0.458135 5_3:-68827188 None:intergenic
TAGATGTGAGTTGGTGAGAC+AGG 0.459234 5_3:-68826195 None:intergenic
TCCGGTGGATTAACTATCTC+AGG 0.459556 5_3:+68826613 Msa0827530:CDS
TACAAACATGGTTAAAGGGT+TGG 0.460250 5_3:+68827260 Msa0827530:CDS
TTTAAAGGCCTATGAGTAGC+AGG 0.460680 5_3:-68827051 None:intergenic
GAATTGACCCTGCTACTCAT+AGG 0.470038 5_3:+68827043 Msa0827530:CDS
ACCTCAACTTCTTCTTAGAC+TGG 0.471989 5_3:+68826308 Msa0827530:five_prime_UTR
TATGATTTCTTGGGTTTGAA+AGG 0.475287 5_3:+68827483 Msa0827530:CDS
GACTTTGACCTCAAGGGAGA+AGG 0.481562 5_3:-68826272 None:intergenic
AAGTTACCACGTTTAAGGTC+TGG 0.484461 5_3:-68826636 None:intergenic
GTGGTAAAAGTTGCCGTCTC+CGG 0.484647 5_3:+68826595 Msa0827530:CDS
AAAAGATATAGTTGTTGGTA+GGG 0.490093 5_3:-68827187 None:intergenic
TTGATAGCTGGAAGATTACC+TGG 0.490973 5_3:+68826955 Msa0827530:CDS
ATACAAATTAGATAAGAAGA+AGG 0.504016 5_3:-68827621 None:intergenic
GATGCAAAAGATATAGTTGT+TGG 0.504785 5_3:-68827192 None:intergenic
ATTTCCAACAATTTCATCAC+AGG 0.514829 5_3:-68827427 None:intergenic
TGTACCTGTGATGAAATTGT+TGG 0.517658 5_3:+68827423 Msa0827530:CDS
AAGTTACTTAACTCAAATAT+GGG 0.518310 5_3:+68826432 Msa0827530:exon
CTCTGTCCCCTTCTCCCTTG+AGG 0.518691 5_3:+68826264 Msa0827530:five_prime_UTR
GATTTCTTGGGTTTGAAAGG+TGG 0.519673 5_3:+68827486 Msa0827530:CDS
ACTTTGACCTCAAGGGAGAA+GGG 0.530662 5_3:-68826271 None:intergenic
AGATCTCTCCCTAAAGCAGC+TGG 0.542426 5_3:+68826561 Msa0827530:CDS
GTAAAAGTTGCCGTCTCCGG+TGG 0.547589 5_3:+68826598 Msa0827530:CDS
ATATAGGGACTTTGACCTCA+AGG 0.551817 5_3:-68826279 None:intergenic
GCCTGAGATAGTTAATCCAC+CGG 0.564577 5_3:-68826614 None:intergenic
ATTGTTGGAAATTCTAGCAG+TGG 0.566489 5_3:+68827438 Msa0827530:CDS
GATAGTTAATCCACCGGAGA+CGG 0.571465 5_3:-68826608 None:intergenic
TCGTGTTCTTGAACAAGTGG+TGG 0.576080 5_3:-68827327 None:intergenic
CTTTGACCTCAAGGGAGAAG+GGG 0.585418 5_3:-68826270 None:intergenic
TATAGGGACTTTGACCTCAA+GGG 0.586259 5_3:-68826278 None:intergenic
TATATTAGGGCACATGGTGA+AGG 0.588854 5_3:+68826531 Msa0827530:CDS
GCCAGTCTAAGAAGAAGTTG+AGG 0.591388 5_3:-68826309 None:intergenic
AATTGCTTCTAGATGTGAGT+TGG 0.596021 5_3:-68826204 None:intergenic
CTCATACAAACAAAGGAGCA+TGG 0.596781 5_3:+68826478 Msa0827530:CDS
AAACCCAAGAAATCATAAGC+AGG 0.597600 5_3:-68827477 None:intergenic
GTGAGACAGGTTAAAGAGAG+TGG 0.600347 5_3:-68826182 None:intergenic
TCATCGTGTTCTTGAACAAG+TGG 0.617174 5_3:-68827330 None:intergenic
ATATCATATATTAGGGCACA+TGG 0.621846 5_3:+68826525 Msa0827530:CDS
GGTGGTGTTTGGGATTACAA+AGG 0.622062 5_3:+68827504 Msa0827530:CDS
AACAATTCAGAAACAGAGAG+AGG 0.655779 5_3:+68827352 Msa0827530:CDS
TCAAGAAATGAATACAAACA+TGG 0.672784 5_3:+68827248 Msa0827530:CDS
TTAAAGGCCTATGAGTAGCA+GGG 0.677936 5_3:-68827050 None:intergenic
CTCAGGCCAGACCTTAAACG+TGG 0.678637 5_3:+68826630 Msa0827530:CDS
GCAGCTGGCTTACTCCGATG+TGG 0.683014 5_3:+68826576 Msa0827530:CDS
GAATATAGATGAAAGTAACG+AGG 0.728773 5_3:-68827713 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGAAATTTTGAATTATAT+AGG - chr5_3:68826377-68826396 None:intergenic 10.0%
!!! TTTGAAATTTTGAATTATAT+AGG - chr5_3:68826377-68826396 None:intergenic 10.0%
!! ATAGACTTATATCATATATT+AGG + chr5_3:68826517-68826536 Msa0827530:CDS 15.0%
!! TAGACTTATATCATATATTA+GGG + chr5_3:68826518-68826537 Msa0827530:CDS 15.0%
!!! TTTAAGAATGTTGTTTTTAT+TGG - chr5_3:68826738-68826757 None:intergenic 15.0%
!!! ATTTTTCAAATTTTTACTAC+TGG + chr5_3:68826825-68826844 Msa0827530:intron 15.0%
!! ATAATGAGATAAAGAATTAT+TGG + chr5_3:68826986-68827005 Msa0827530:CDS 15.0%
!! ATTAACAGGAAAAAATAAAT+AGG - chr5_3:68827754-68827773 None:intergenic 15.0%
!! ATAATCATAACAAAATTAAC+AGG - chr5_3:68827768-68827787 None:intergenic 15.0%
!! ATAGACTTATATCATATATT+AGG + chr5_3:68826517-68826536 Msa0827530:CDS 15.0%
!! TAGACTTATATCATATATTA+GGG + chr5_3:68826518-68826537 Msa0827530:CDS 15.0%
!!! TTTAAGAATGTTGTTTTTAT+TGG - chr5_3:68826738-68826757 None:intergenic 15.0%
!!! ATTTTTCAAATTTTTACTAC+TGG + chr5_3:68826825-68826844 Msa0827530:intron 15.0%
!! ATAATGAGATAAAGAATTAT+TGG + chr5_3:68826986-68827005 Msa0827530:CDS 15.0%
!! ATTAACAGGAAAAAATAAAT+AGG - chr5_3:68827754-68827773 None:intergenic 15.0%
!! ATAATCATAACAAAATTAAC+AGG - chr5_3:68827768-68827787 None:intergenic 15.0%
!! AAGTTACTTAACTCAAATAT+GGG + chr5_3:68826432-68826451 Msa0827530:exon 20.0%
!! ATACAAATTAGATAAGAAGA+AGG - chr5_3:68827624-68827643 None:intergenic 20.0%
!!! TGATTAATCAATTTTTAGAC+AGG + chr5_3:68827788-68827807 Msa0827530:three_prime_UTR 20.0%
!! AAGTTACTTAACTCAAATAT+GGG + chr5_3:68826432-68826451 Msa0827530:exon 20.0%
!! ATACAAATTAGATAAGAAGA+AGG - chr5_3:68827624-68827643 None:intergenic 20.0%
!!! TGATTAATCAATTTTTAGAC+AGG + chr5_3:68827788-68827807 Msa0827530:three_prime_UTR 20.0%
! AGTTGAGGTATGATTATATA+GGG - chr5_3:68826297-68826316 None:intergenic 25.0%
! AAGTTGAGGTATGATTATAT+AGG - chr5_3:68826298-68826317 None:intergenic 25.0%
! CAAGTTACTTAACTCAAATA+TGG + chr5_3:68826431-68826450 Msa0827530:exon 25.0%
! ATATGCTACAGAGAATAAAA+GGG - chr5_3:68826763-68826782 None:intergenic 25.0%
!! TTTCTCTTCTTTCTTTTAGA+TGG + chr5_3:68826929-68826948 Msa0827530:intron 25.0%
! AAAAGATATAGTTGTTGGTA+GGG - chr5_3:68827190-68827209 None:intergenic 25.0%
!! ATGATATTGTTCTTGTTTGA+TGG - chr5_3:68827220-68827239 None:intergenic 25.0%
! TCAAGAAATGAATACAAACA+TGG + chr5_3:68827248-68827267 Msa0827530:CDS 25.0%
! ATGAATACAAACATGGTTAA+AGG + chr5_3:68827255-68827274 Msa0827530:CDS 25.0%
! TGAATACAAACATGGTTAAA+GGG + chr5_3:68827256-68827275 Msa0827530:CDS 25.0%
!!! AGAGAGGTATTCAAAATTAA+TGG - chr5_3:68827590-68827609 None:intergenic 25.0%
! CAGGCAATATAAAAATATGA+TGG + chr5_3:68827807-68827826 Msa0827530:three_prime_UTR 25.0%
! AGTTGAGGTATGATTATATA+GGG - chr5_3:68826297-68826316 None:intergenic 25.0%
! AAGTTGAGGTATGATTATAT+AGG - chr5_3:68826298-68826317 None:intergenic 25.0%
! CAAGTTACTTAACTCAAATA+TGG + chr5_3:68826431-68826450 Msa0827530:exon 25.0%
! ATATGCTACAGAGAATAAAA+GGG - chr5_3:68826763-68826782 None:intergenic 25.0%
!! TTTCTCTTCTTTCTTTTAGA+TGG + chr5_3:68826929-68826948 Msa0827530:intron 25.0%
! AAAAGATATAGTTGTTGGTA+GGG - chr5_3:68827190-68827209 None:intergenic 25.0%
!! ATGATATTGTTCTTGTTTGA+TGG - chr5_3:68827220-68827239 None:intergenic 25.0%
! TCAAGAAATGAATACAAACA+TGG + chr5_3:68827248-68827267 Msa0827530:CDS 25.0%
! ATGAATACAAACATGGTTAA+AGG + chr5_3:68827255-68827274 Msa0827530:CDS 25.0%
! TGAATACAAACATGGTTAAA+GGG + chr5_3:68827256-68827275 Msa0827530:CDS 25.0%
!!! AGAGAGGTATTCAAAATTAA+TGG - chr5_3:68827590-68827609 None:intergenic 25.0%
GAAAAAGCTCATACAAACAA+AGG + chr5_3:68826471-68826490 Msa0827530:CDS 30.0%
ATATCATATATTAGGGCACA+TGG + chr5_3:68826525-68826544 Msa0827530:CDS 30.0%
CATATGCTACAGAGAATAAA+AGG - chr5_3:68826764-68826783 None:intergenic 30.0%
! AGAAGAAAGCTTTTGAATAG+AGG + chr5_3:68827021-68827040 Msa0827530:CDS 30.0%
GAATGAGAAACTTCGTTTAA+AGG - chr5_3:68827069-68827088 None:intergenic 30.0%
CAAAAGATATAGTTGTTGGT+AGG - chr5_3:68827191-68827210 None:intergenic 30.0%
GATGCAAAAGATATAGTTGT+TGG - chr5_3:68827195-68827214 None:intergenic 30.0%
!!! TCTCTGTTTTGTTTGTAGTT+TGG + chr5_3:68827380-68827399 Msa0827530:CDS 30.0%
!!! CTCTGTTTTGTTTGTAGTTT+GGG + chr5_3:68827381-68827400 Msa0827530:CDS 30.0%
ATTTCCAACAATTTCATCAC+AGG - chr5_3:68827430-68827449 None:intergenic 30.0%
TATGATTTCTTGGGTTTGAA+AGG + chr5_3:68827483-68827502 Msa0827530:CDS 30.0%
GAAGGAAAAAAATAAGAGAG+AGG - chr5_3:68827606-68827625 None:intergenic 30.0%
TCAGTATAGCTGAACATTAT+TGG + chr5_3:68827677-68827696 Msa0827530:three_prime_UTR 30.0%
GAATATAGATGAAAGTAACG+AGG - chr5_3:68827716-68827735 None:intergenic 30.0%
GAAAAAGCTCATACAAACAA+AGG + chr5_3:68826471-68826490 Msa0827530:CDS 30.0%
ATATCATATATTAGGGCACA+TGG + chr5_3:68826525-68826544 Msa0827530:CDS 30.0%
CATATGCTACAGAGAATAAA+AGG - chr5_3:68826764-68826783 None:intergenic 30.0%
! AGAAGAAAGCTTTTGAATAG+AGG + chr5_3:68827021-68827040 Msa0827530:CDS 30.0%
GAATGAGAAACTTCGTTTAA+AGG - chr5_3:68827069-68827088 None:intergenic 30.0%
CAAAAGATATAGTTGTTGGT+AGG - chr5_3:68827191-68827210 None:intergenic 30.0%
GATGCAAAAGATATAGTTGT+TGG - chr5_3:68827195-68827214 None:intergenic 30.0%
!!! TCTCTGTTTTGTTTGTAGTT+TGG + chr5_3:68827380-68827399 Msa0827530:CDS 30.0%
!!! CTCTGTTTTGTTTGTAGTTT+GGG + chr5_3:68827381-68827400 Msa0827530:CDS 30.0%
ATTTCCAACAATTTCATCAC+AGG - chr5_3:68827430-68827449 None:intergenic 30.0%
TATGATTTCTTGGGTTTGAA+AGG + chr5_3:68827483-68827502 Msa0827530:CDS 30.0%
GAAGGAAAAAAATAAGAGAG+AGG - chr5_3:68827606-68827625 None:intergenic 30.0%
TCAGTATAGCTGAACATTAT+TGG + chr5_3:68827677-68827696 Msa0827530:three_prime_UTR 30.0%
GAATATAGATGAAAGTAACG+AGG - chr5_3:68827716-68827735 None:intergenic 30.0%
AATTGCTTCTAGATGTGAGT+TGG - chr5_3:68826207-68826226 None:intergenic 35.0%
!!! GTATGAGCTTTTTCACAACA+AGG - chr5_3:68826465-68826484 None:intergenic 35.0%
ATCAAACTCCATAGTCTTCT+TGG + chr5_3:68826684-68826703 Msa0827530:CDS 35.0%
! ACTTGTTACCAAGAAGACTA+TGG - chr5_3:68826695-68826714 None:intergenic 35.0%
CATATGCACTTCTGATAGAA+GGG + chr5_3:68826778-68826797 Msa0827530:intron 35.0%
ATATGCACTTCTGATAGAAG+GGG + chr5_3:68826779-68826798 Msa0827530:intron 35.0%
! TTTAGATGGTCTTTGATAGC+TGG + chr5_3:68826943-68826962 Msa0827530:intron 35.0%
ATCTCATTATCTGTTCTTCC+AGG - chr5_3:68826976-68826995 None:intergenic 35.0%
TACAAACATGGTTAAAGGGT+TGG + chr5_3:68827260-68827279 Msa0827530:CDS 35.0%
GTTAGCTCAAGATTCAAATC+AGG - chr5_3:68827300-68827319 None:intergenic 35.0%
AACAATTCAGAAACAGAGAG+AGG + chr5_3:68827352-68827371 Msa0827530:CDS 35.0%
! TTTGGGTTTGCAGAATAGTA+AGG + chr5_3:68827398-68827417 Msa0827530:CDS 35.0%
TGTACCTGTGATGAAATTGT+TGG + chr5_3:68827423-68827442 Msa0827530:CDS 35.0%
ATTGTTGGAAATTCTAGCAG+TGG + chr5_3:68827438-68827457 Msa0827530:CDS 35.0%
AAACCCAAGAAATCATAAGC+AGG - chr5_3:68827480-68827499 None:intergenic 35.0%
AATTGCTTCTAGATGTGAGT+TGG - chr5_3:68826207-68826226 None:intergenic 35.0%
!!! GTATGAGCTTTTTCACAACA+AGG - chr5_3:68826465-68826484 None:intergenic 35.0%
ATCAAACTCCATAGTCTTCT+TGG + chr5_3:68826684-68826703 Msa0827530:CDS 35.0%
! ACTTGTTACCAAGAAGACTA+TGG - chr5_3:68826695-68826714 None:intergenic 35.0%
CATATGCACTTCTGATAGAA+GGG + chr5_3:68826778-68826797 Msa0827530:intron 35.0%
ATATGCACTTCTGATAGAAG+GGG + chr5_3:68826779-68826798 Msa0827530:intron 35.0%
! TTTAGATGGTCTTTGATAGC+TGG + chr5_3:68826943-68826962 Msa0827530:intron 35.0%
ATCTCATTATCTGTTCTTCC+AGG - chr5_3:68826976-68826995 None:intergenic 35.0%
TACAAACATGGTTAAAGGGT+TGG + chr5_3:68827260-68827279 Msa0827530:CDS 35.0%
GTTAGCTCAAGATTCAAATC+AGG - chr5_3:68827300-68827319 None:intergenic 35.0%
AACAATTCAGAAACAGAGAG+AGG + chr5_3:68827352-68827371 Msa0827530:CDS 35.0%
! TTTGGGTTTGCAGAATAGTA+AGG + chr5_3:68827398-68827417 Msa0827530:CDS 35.0%
TGTACCTGTGATGAAATTGT+TGG + chr5_3:68827423-68827442 Msa0827530:CDS 35.0%
ATTGTTGGAAATTCTAGCAG+TGG + chr5_3:68827438-68827457 Msa0827530:CDS 35.0%
AAACCCAAGAAATCATAAGC+AGG - chr5_3:68827480-68827499 None:intergenic 35.0%
TATAGGGACTTTGACCTCAA+GGG - chr5_3:68826281-68826300 None:intergenic 40.0%
ATATAGGGACTTTGACCTCA+AGG - chr5_3:68826282-68826301 None:intergenic 40.0%
ACCTCAACTTCTTCTTAGAC+TGG + chr5_3:68826308-68826327 Msa0827530:five_prime_UTR 40.0%
CTCATACAAACAAAGGAGCA+TGG + chr5_3:68826478-68826497 Msa0827530:CDS 40.0%
TATATTAGGGCACATGGTGA+AGG + chr5_3:68826531-68826550 Msa0827530:CDS 40.0%
! AAGTTACCACGTTTAAGGTC+TGG - chr5_3:68826639-68826658 None:intergenic 40.0%
CTGTGAAGTTACCACGTTTA+AGG - chr5_3:68826644-68826663 None:intergenic 40.0%
GCATATGCACTTCTGATAGA+AGG + chr5_3:68826777-68826796 Msa0827530:intron 40.0%
! TTGATAGCTGGAAGATTACC+TGG + chr5_3:68826955-68826974 Msa0827530:CDS 40.0%
TTAAAGGCCTATGAGTAGCA+GGG - chr5_3:68827053-68827072 None:intergenic 40.0%
TTTAAAGGCCTATGAGTAGC+AGG - chr5_3:68827054-68827073 None:intergenic 40.0%
TCATCGTGTTCTTGAACAAG+TGG - chr5_3:68827333-68827352 None:intergenic 40.0%
GGAAATTCTAGCAGTGGAAA+TGG + chr5_3:68827444-68827463 Msa0827530:CDS 40.0%
TGCACCTGCTTATGATTTCT+TGG + chr5_3:68827473-68827492 Msa0827530:CDS 40.0%
GCACCTGCTTATGATTTCTT+GGG + chr5_3:68827474-68827493 Msa0827530:CDS 40.0%
GATTTCTTGGGTTTGAAAGG+TGG + chr5_3:68827486-68827505 Msa0827530:CDS 40.0%
TATAGGGACTTTGACCTCAA+GGG - chr5_3:68826281-68826300 None:intergenic 40.0%
ATATAGGGACTTTGACCTCA+AGG - chr5_3:68826282-68826301 None:intergenic 40.0%
ACCTCAACTTCTTCTTAGAC+TGG + chr5_3:68826308-68826327 Msa0827530:five_prime_UTR 40.0%
CTCATACAAACAAAGGAGCA+TGG + chr5_3:68826478-68826497 Msa0827530:CDS 40.0%
TATATTAGGGCACATGGTGA+AGG + chr5_3:68826531-68826550 Msa0827530:CDS 40.0%
! AAGTTACCACGTTTAAGGTC+TGG - chr5_3:68826639-68826658 None:intergenic 40.0%
CTGTGAAGTTACCACGTTTA+AGG - chr5_3:68826644-68826663 None:intergenic 40.0%
GCATATGCACTTCTGATAGA+AGG + chr5_3:68826777-68826796 Msa0827530:intron 40.0%
! TTGATAGCTGGAAGATTACC+TGG + chr5_3:68826955-68826974 Msa0827530:CDS 40.0%
TTAAAGGCCTATGAGTAGCA+GGG - chr5_3:68827053-68827072 None:intergenic 40.0%
TTTAAAGGCCTATGAGTAGC+AGG - chr5_3:68827054-68827073 None:intergenic 40.0%
TCATCGTGTTCTTGAACAAG+TGG - chr5_3:68827333-68827352 None:intergenic 40.0%
GGAAATTCTAGCAGTGGAAA+TGG + chr5_3:68827444-68827463 Msa0827530:CDS 40.0%
TGCACCTGCTTATGATTTCT+TGG + chr5_3:68827473-68827492 Msa0827530:CDS 40.0%
GCACCTGCTTATGATTTCTT+GGG + chr5_3:68827474-68827493 Msa0827530:CDS 40.0%
GATTTCTTGGGTTTGAAAGG+TGG + chr5_3:68827486-68827505 Msa0827530:CDS 40.0%
GTGAGACAGGTTAAAGAGAG+TGG - chr5_3:68826185-68826204 None:intergenic 45.0%
!! TAGATGTGAGTTGGTGAGAC+AGG - chr5_3:68826198-68826217 None:intergenic 45.0%
ACTTTGACCTCAAGGGAGAA+GGG - chr5_3:68826274-68826293 None:intergenic 45.0%
GCCAGTCTAAGAAGAAGTTG+AGG - chr5_3:68826312-68826331 None:intergenic 45.0%
! GACGGCAACTTTTACCACAT+CGG - chr5_3:68826593-68826612 None:intergenic 45.0%
GATAGTTAATCCACCGGAGA+CGG - chr5_3:68826611-68826630 None:intergenic 45.0%
!! TCCGGTGGATTAACTATCTC+AGG + chr5_3:68826613-68826632 Msa0827530:CDS 45.0%
GCCTGAGATAGTTAATCCAC+CGG - chr5_3:68826617-68826636 None:intergenic 45.0%
GAATTGACCCTGCTACTCAT+AGG + chr5_3:68827043-68827062 Msa0827530:CDS 45.0%
! GGTAGGGTTTTTGTAGCAGT+GGG - chr5_3:68827174-68827193 None:intergenic 45.0%
! TGGTAGGGTTTTTGTAGCAG+TGG - chr5_3:68827175-68827194 None:intergenic 45.0%
TCGTGTTCTTGAACAAGTGG+TGG - chr5_3:68827330-68827349 None:intergenic 45.0%
TGGGTTTGAAAGGTGGTGTT+TGG + chr5_3:68827493-68827512 Msa0827530:CDS 45.0%
GGGTTTGAAAGGTGGTGTTT+GGG + chr5_3:68827494-68827513 Msa0827530:CDS 45.0%
! GGTGGTGTTTGGGATTACAA+AGG + chr5_3:68827504-68827523 Msa0827530:CDS 45.0%
GTGAGACAGGTTAAAGAGAG+TGG - chr5_3:68826185-68826204 None:intergenic 45.0%
!! TAGATGTGAGTTGGTGAGAC+AGG - chr5_3:68826198-68826217 None:intergenic 45.0%
ACTTTGACCTCAAGGGAGAA+GGG - chr5_3:68826274-68826293 None:intergenic 45.0%
GCCAGTCTAAGAAGAAGTTG+AGG - chr5_3:68826312-68826331 None:intergenic 45.0%
! GACGGCAACTTTTACCACAT+CGG - chr5_3:68826593-68826612 None:intergenic 45.0%
GATAGTTAATCCACCGGAGA+CGG - chr5_3:68826611-68826630 None:intergenic 45.0%
!! TCCGGTGGATTAACTATCTC+AGG + chr5_3:68826613-68826632 Msa0827530:CDS 45.0%
GCCTGAGATAGTTAATCCAC+CGG - chr5_3:68826617-68826636 None:intergenic 45.0%
GAATTGACCCTGCTACTCAT+AGG + chr5_3:68827043-68827062 Msa0827530:CDS 45.0%
! GGTAGGGTTTTTGTAGCAGT+GGG - chr5_3:68827174-68827193 None:intergenic 45.0%
! TGGTAGGGTTTTTGTAGCAG+TGG - chr5_3:68827175-68827194 None:intergenic 45.0%
TCGTGTTCTTGAACAAGTGG+TGG - chr5_3:68827330-68827349 None:intergenic 45.0%
TGGGTTTGAAAGGTGGTGTT+TGG + chr5_3:68827493-68827512 Msa0827530:CDS 45.0%
GGGTTTGAAAGGTGGTGTTT+GGG + chr5_3:68827494-68827513 Msa0827530:CDS 45.0%
! GGTGGTGTTTGGGATTACAA+AGG + chr5_3:68827504-68827523 Msa0827530:CDS 45.0%
CTTTGACCTCAAGGGAGAAG+GGG - chr5_3:68826273-68826292 None:intergenic 50.0%
GACTTTGACCTCAAGGGAGA+AGG - chr5_3:68826275-68826294 None:intergenic 50.0%
AGATCTCTCCCTAAAGCAGC+TGG + chr5_3:68826561-68826580 Msa0827530:CDS 50.0%
! GGAGTAAGCCAGCTGCTTTA+GGG - chr5_3:68826572-68826591 None:intergenic 50.0%
GTGGTAAAAGTTGCCGTCTC+CGG + chr5_3:68826595-68826614 Msa0827530:CDS 50.0%
GAACGTGTCTGTGTTGTGTC+TGG + chr5_3:68826851-68826870 Msa0827530:intron 50.0%
TGTCTGGTGTCTGTGTGTCT+AGG + chr5_3:68826867-68826886 Msa0827530:intron 50.0%
GTCTGGTGTCTGTGTGTCTA+GGG + chr5_3:68826868-68826887 Msa0827530:intron 50.0%
CTTTGACCTCAAGGGAGAAG+GGG - chr5_3:68826273-68826292 None:intergenic 50.0%
GACTTTGACCTCAAGGGAGA+AGG - chr5_3:68826275-68826294 None:intergenic 50.0%
AGATCTCTCCCTAAAGCAGC+TGG + chr5_3:68826561-68826580 Msa0827530:CDS 50.0%
! GGAGTAAGCCAGCTGCTTTA+GGG - chr5_3:68826572-68826591 None:intergenic 50.0%
GTGGTAAAAGTTGCCGTCTC+CGG + chr5_3:68826595-68826614 Msa0827530:CDS 50.0%
GAACGTGTCTGTGTTGTGTC+TGG + chr5_3:68826851-68826870 Msa0827530:intron 50.0%
TGTCTGGTGTCTGTGTGTCT+AGG + chr5_3:68826867-68826886 Msa0827530:intron 50.0%
GTCTGGTGTCTGTGTGTCTA+GGG + chr5_3:68826868-68826887 Msa0827530:intron 50.0%
GGGCACATGGTGAAGGTTGT+TGG + chr5_3:68826538-68826557 Msa0827530:CDS 55.0%
! CGGAGTAAGCCAGCTGCTTT+AGG - chr5_3:68826573-68826592 None:intergenic 55.0%
GTAAAAGTTGCCGTCTCCGG+TGG + chr5_3:68826598-68826617 Msa0827530:CDS 55.0%
CTCAGGCCAGACCTTAAACG+TGG + chr5_3:68826630-68826649 Msa0827530:CDS 55.0%
GGGCACATGGTGAAGGTTGT+TGG + chr5_3:68826538-68826557 Msa0827530:CDS 55.0%
! CGGAGTAAGCCAGCTGCTTT+AGG - chr5_3:68826573-68826592 None:intergenic 55.0%
GTAAAAGTTGCCGTCTCCGG+TGG + chr5_3:68826598-68826617 Msa0827530:CDS 55.0%
CTCAGGCCAGACCTTAAACG+TGG + chr5_3:68826630-68826649 Msa0827530:CDS 55.0%
CTCTGTCCCCTTCTCCCTTG+AGG + chr5_3:68826264-68826283 Msa0827530:five_prime_UTR 60.0%
! GCAGCTGGCTTACTCCGATG+TGG + chr5_3:68826576-68826595 Msa0827530:CDS 60.0%
CTCTGTCCCCTTCTCCCTTG+AGG + chr5_3:68826264-68826283 Msa0827530:five_prime_UTR 60.0%
! GCAGCTGGCTTACTCCGATG+TGG + chr5_3:68826576-68826595 Msa0827530:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 68826173 68827829 68826173 ID=Msa0827530;Name=Msa0827530
chr5_3 mRNA 68826173 68827829 68826173 ID=Msa0827530-mRNA-1;Parent=Msa0827530;Name=Msa0827530-mRNA-1;_AED=0.00;_eAED=0.00;_QI=277|1|1|1|1|1|2|287|285
chr5_3 exon 68826173 68826712 68826173 ID=Msa0827530-mRNA-1:exon:21605;Parent=Msa0827530-mRNA-1
chr5_3 exon 68826948 68827829 68826948 ID=Msa0827530-mRNA-1:exon:21606;Parent=Msa0827530-mRNA-1
chr5_3 five_prime_UTR 68826173 68826449 68826173 ID=Msa0827530-mRNA-1:five_prime_utr;Parent=Msa0827530-mRNA-1
chr5_3 CDS 68826450 68826712 68826450 ID=Msa0827530-mRNA-1:cds;Parent=Msa0827530-mRNA-1
chr5_3 CDS 68826948 68827542 68826948 ID=Msa0827530-mRNA-1:cds;Parent=Msa0827530-mRNA-1
chr5_3 three_prime_UTR 68827543 68827829 68827543 ID=Msa0827530-mRNA-1:three_prime_utr;Parent=Msa0827530-mRNA-1
Gene Sequence

>Msa0827530

ATGGGAAGATCACCTTGTTGTGAAAAAGCTCATACAAACAAAGGAGCATGGACAAAAGAAGAAGATGATAGACTTATATCATATATTAGGGCACATGGTGAAGGTTGTTGGAGATCTCTCCCTAAAGCAGCTGGCTTACTCCGATGTGGTAAAAGTTGCCGTCTCCGGTGGATTAACTATCTCAGGCCAGACCTTAAACGTGGTAACTTCACAGAAGAAGAAGATGAACTCATCATCAAACTCCATAGTCTTCTTGGTAACAAATGGTCTTTGATAGCTGGAAGATTACCTGGAAGAACAGATAATGAGATAAAGAATTATTGGAACACTCATATAAGAAGAAAGCTTTTGAATAGAGGAATTGACCCTGCTACTCATAGGCCTTTAAACGAAGTTTCTCATTCTCAATCTCAATCACAATCTCAAACTCTTCATCTTCAAAATCAAGAAGCTGTTACTATAGCTGTAGCAGCATCTACATCAGCTCCCACTGCTACAAAAACCCTACCAACAACTATATCTTTTGCATCATCCATCAAACAAGAACAATATCATCATCATCATCAAGAAATGAATACAAACATGGTTAAAGGGTTGGTTTTAGAACGTTGTCCTGATTTGAATCTTGAGCTAACAATTAGTCCACCACTTGTTCAAGAACACGATGAACAATTCAGAAACAGAGAGAGGAACAATCTCTGTTTTGTTTGTAGTTTGGGTTTGCAGAATAGTAAGGATTGTACCTGTGATGAAATTGTTGGAAATTCTAGCAGTGGAAATGGTTCTACTGCACCTGCTTATGATTTCTTGGGTTTGAAAGGTGGTGTTTGGGATTACAAAGGCTTAGAAATGAAATGA
Protein sequence

>Msa0827530

MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPATHRPLNEVSHSQSQSQSQTLHLQNQEAVTIAVAASTSAPTATKTLPTTISFASSIKQEQYHHHHQEMNTNMVKGLVLERCPDLNLELTISPPLVQEHDEQFRNRERNNLCFVCSLGLQNSKDCTCDEIVGNSSSGNGSTAPAYDFLGLKGGVWDYKGLEMK*