AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0827550


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0827550 MtrunA17_Chr5g0427961 97.484 159 4 0 1 159 6 164 1.57e-113 318
Msa0827550 MtrunA17_Chr2g0279821 53.179 173 67 1 1 159 62 234 1.26e-55 174
Msa0827550 MtrunA17_Chr5g0411691 52.273 176 63 5 1 157 62 235 6.05e-51 162
Msa0827550 MtrunA17_Chr4g0049541 45.912 159 73 3 1 146 62 220 3.48e-36 124
Msa0827550 MtrunA17_Chr3g0077501 41.441 111 62 2 1 109 62 171 2.39e-17 75.9
Msa0827550 MtrunA17_Chr2g0284911 36.364 110 69 1 1 109 77 186 7.29e-15 69.7
Msa0827550 MtrunA17_Chr8g0380021 30.872 149 91 3 1 148 78 215 1.33e-14 68.9
Msa0827550 MtrunA17_Chr2g0308271 35.455 110 70 1 1 109 34 143 8.61e-14 65.9
Msa0827550 MtrunA17_Chr7g0220111 34.286 105 69 0 1 105 63 167 2.63e-12 62.4
Msa0827550 MtrunA17_Chr8g0366231 33.010 103 68 1 1 102 63 165 3.13e-12 62.4
Msa0827550 MtrunA17_Chr4g0061691 35.922 103 65 1 1 102 63 165 3.41e-12 62.0
Msa0827550 MtrunA17_Chr5g0420081 37.805 82 51 0 28 109 91 172 3.40e-11 59.3
Msa0827550 MtrunA17_Chr6g0455511 32.110 109 74 0 1 109 63 171 4.29e-11 59.3
Msa0827550 MtrunA17_Chr3g0097101 38.636 88 52 2 1 86 77 164 4.47e-11 59.3
Msa0827550 MtrunA17_Chr7g0220121 30.921 152 88 7 1 146 63 203 5.02e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0827550 AT4G37940.2 57.407 162 60 3 1 153 1 162 6.26e-56 173
Msa0827550 AT4G37940.1 57.407 162 60 3 1 153 62 223 3.39e-55 173
Msa0827550 AT3G57230.5 53.988 163 61 1 1 149 28 190 1.41e-53 169
Msa0827550 AT3G57230.3 53.988 163 61 1 1 149 28 190 1.41e-53 169
Msa0827550 AT4G37940.4 56.863 153 61 1 1 153 62 209 1.92e-53 168
Msa0827550 AT3G57230.1 53.988 163 61 1 1 149 62 224 3.08e-53 169
Msa0827550 AT3G57230.4 53.988 163 61 1 1 149 62 224 3.08e-53 169
Msa0827550 AT2G22630.1 50.588 170 66 2 1 156 62 227 7.58e-51 162
Msa0827550 AT2G22630.2 50.588 170 66 2 1 156 62 227 7.58e-51 162
Msa0827550 AT4G37940.3 71.429 84 24 0 1 84 62 145 1.70e-37 127
Msa0827550 AT2G14210.1 48.447 161 64 3 1 146 63 219 2.20e-35 123
Msa0827550 AT2G14210.2 48.447 161 64 3 1 146 63 219 2.35e-35 123
Msa0827550 AT3G57230.2 68.750 80 25 0 1 80 62 141 1.83e-33 115
Msa0827550 AT4G09960.5 39.640 111 64 2 1 109 72 181 7.49e-17 75.1
Msa0827550 AT4G09960.1 39.640 111 64 2 1 109 62 171 7.92e-17 74.7
Msa0827550 AT4G09960.6 39.640 111 64 2 1 109 63 172 8.57e-17 74.7
Msa0827550 AT4G09960.3 39.640 111 64 2 1 109 88 197 1.79e-16 74.3
Msa0827550 AT4G18960.1 35.455 110 70 1 1 109 78 187 1.06e-15 72.4
Msa0827550 AT4G18960.3 35.455 110 70 1 1 109 64 173 1.17e-15 72.0
Msa0827550 AT4G18960.2 35.455 110 70 1 1 109 64 173 1.17e-15 72.0
Msa0827550 AT4G18960.4 37.838 111 66 2 1 109 64 173 1.81e-15 70.5
Msa0827550 AT4G09960.4 42.056 107 56 4 1 105 157 259 1.95e-14 69.7
Msa0827550 AT4G09960.2 44.578 83 43 2 1 81 62 143 4.21e-14 67.4
Msa0827550 AT3G58780.5 34.545 110 71 1 1 109 83 192 1.55e-13 66.2
Msa0827550 AT3G58780.1 34.545 110 71 1 1 109 77 186 1.63e-13 66.2
Msa0827550 AT5G60910.2 31.356 118 80 1 1 117 1 118 2.22e-13 64.7
Msa0827550 AT3G58780.3 34.545 110 71 1 1 109 102 211 3.17e-13 65.9
Msa0827550 AT5G60910.1 31.356 118 80 1 1 117 63 180 6.34e-13 64.7
Msa0827550 AT2G42830.2 33.645 107 70 1 1 106 77 183 1.43e-12 63.5
Msa0827550 AT2G42830.1 32.727 110 73 1 1 109 77 186 1.57e-12 63.5
Msa0827550 AT1G69120.3 30.909 110 75 1 1 109 1 110 5.41e-12 61.2
Msa0827550 AT3G58780.2 34.286 105 68 1 6 109 75 179 5.61e-12 62.0
Msa0827550 AT1G69120.1 30.909 110 75 1 1 109 63 172 1.32e-11 61.2
Msa0827550 AT1G69120.2 30.909 110 75 1 1 109 63 172 1.58e-11 60.5
Msa0827550 AT2G45650.1 28.667 150 98 3 1 145 62 207 2.10e-11 60.5
Msa0827550 AT1G26310.1 32.143 112 73 1 1 109 63 174 2.48e-11 60.5
Msa0827550 AT3G61120.1 37.374 99 55 3 4 97 65 161 5.04e-11 59.3
Msa0827550 AT2G45660.1 28.906 128 83 2 1 120 62 189 7.88e-11 58.5

Find 27 sgRNAs with CRISPR-Local

Find 598 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTGGTGTTCGTATGAAAA+AGG 0.265336 5_3:-68888636 Msa0827550:intron
GTTGCTGTGGCTGGCTGAGC+TGG 0.265925 5_3:+68888125 None:intergenic
TTTGACAGTCAAAGAATTAC+AGG 0.270267 5_3:-68888687 Msa0827550:CDS
AGTCAAAGAATTACAGGGTT+TGG 0.349043 5_3:-68888681 Msa0827550:CDS
TGTAGTGCTGTTGCTGTGGC+TGG 0.362075 5_3:+68888116 None:intergenic
GAGTACAGCCTCTGAAATTA+AGG 0.362541 5_3:-68897469 Msa0827550:intron
CAGCACTACAAGGCCCCTTC+AGG 0.400025 5_3:-68888103 Msa0827550:CDS
CACGAAGGCTGATTTCCAAT+TGG 0.418933 5_3:+68888654 None:intergenic
ATAATGGGTGAAGAATTATC+AGG 0.435228 5_3:-68888710 Msa0827550:CDS
CCTTCAGGAACTACAAAACT+AGG 0.437724 5_3:-68888088 None:intergenic
ACAGGGTTTGGAGAACCAAT+TGG 0.438427 5_3:-68888669 Msa0827550:CDS
GCCACAGCAACAGCACTACA+AGG 0.440362 5_3:-68888113 Msa0827550:CDS
AAAGGGAGGCAGCAGTGTTA+AGG 0.445407 5_3:-68895033 Msa0827550:CDS
CAATTGGAAATCAGCCTTCG+TGG 0.498114 5_3:-68888653 Msa0827550:CDS
TATGGAACAAAAGATAAGAA+TGG 0.521790 5_3:-68888217 Msa0827550:CDS
AAAGAAGAACATAATCAACT+TGG 0.523291 5_3:-68897492 Msa0827550:CDS
GCCTTGTAGTGCTGTTGCTG+TGG 0.529029 5_3:+68888112 None:intergenic
TGGCTGAGCTGGAGATTCAC+AGG 0.536518 5_3:+68888136 None:intergenic
TGTAAATACCTTAATTTCAG+AGG 0.536791 5_3:+68897461 None:intergenic
TTGAGTCTCACAAATGGTGT+AGG 0.558166 5_3:-68888181 Msa0827550:CDS
AAATGTCGAACTGTATCGTA+AGG 0.559396 5_3:-68888398 Msa0827550:intron
AAGAAGAACATAATCAACTT+GGG 0.589752 5_3:-68897491 Msa0827550:CDS
AATACAAGAACTAAATCGAA+AGG 0.627509 5_3:-68888514 Msa0827550:intron
CTTCAGGAACTACAAAACTA+GGG 0.628417 5_3:-68888087 None:intergenic
TTGACAGTCAAAGAATTACA+GGG 0.630718 5_3:-68888686 Msa0827550:CDS
CTCACAAATGGTGTAGGCAT+AGG 0.634440 5_3:-68888175 Msa0827550:CDS
ACAATCTGCAAGAAAGTCAC+CGG 0.642165 5_3:-68895000 Msa0827550:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAATAATTAATATGGA+AGG - chr5_3:68888528-68888547 Msa0827550:CDS 10.0%
!! TTAAAATAAAATATGTTGAA+GGG + chr5_3:68890646-68890665 None:intergenic 10.0%
!! ATTAAAATAAAATATGTTGA+AGG + chr5_3:68890647-68890666 None:intergenic 10.0%
!!! TATTTCAATTAAATTTTGTT+AGG + chr5_3:68895949-68895968 None:intergenic 10.0%
!!! AATTATCAAATTTTTTAATG+AGG - chr5_3:68897326-68897345 Msa0827550:intron 10.0%
!!! TTTTGAGAGAAATTTTTTTA+AGG - chr5_3:68889179-68889198 Msa0827550:intron 15.0%
!!! TGATATTTTATTAAAAGAGA+GGG + chr5_3:68889466-68889485 None:intergenic 15.0%
!!! ATGATATTTTATTAAAAGAG+AGG + chr5_3:68889467-68889486 None:intergenic 15.0%
!! TATAATAAATAACAGGATAT+AGG + chr5_3:68889577-68889596 None:intergenic 15.0%
!!! GTATATATATTAATCTGTTT+TGG - chr5_3:68891793-68891812 Msa0827550:intron 15.0%
!!! TTAACATTGATTCAATATAA+TGG - chr5_3:68892027-68892046 Msa0827550:intron 15.0%
!! TTGATAAATTTAACATATCT+TGG - chr5_3:68892164-68892183 Msa0827550:intron 15.0%
!! GATAAATAACTGTATAATAT+GGG + chr5_3:68892501-68892520 None:intergenic 15.0%
!! AGATAAATAACTGTATAATA+TGG + chr5_3:68892502-68892521 None:intergenic 15.0%
!!! TTTGCTAATTTGATTTATTA+TGG - chr5_3:68894180-68894199 Msa0827550:intron 15.0%
!! AATATTATCGGAAAAATTTA+TGG + chr5_3:68894259-68894278 None:intergenic 15.0%
!! ATTGAAATATAACAATTAGT+TGG - chr5_3:68895960-68895979 Msa0827550:intron 15.0%
!! ATATTTAACACATTAGATAT+TGG + chr5_3:68896254-68896273 None:intergenic 15.0%
!! TCTAATGTGTTAAATATTTA+AGG - chr5_3:68896257-68896276 Msa0827550:intron 15.0%
!! AAATATGAAATTGAAAAAGA+AGG - chr5_3:68897260-68897279 Msa0827550:intron 15.0%
!!! CTCTTCTATTTTTTAATAAG+AGG - chr5_3:68888262-68888281 Msa0827550:intron 20.0%
!! ATAATGACATTAATTACAAC+TGG - chr5_3:68889217-68889236 Msa0827550:intron 20.0%
!! AGAAACTTTGTAAATTATTG+AGG - chr5_3:68889309-68889328 Msa0827550:intron 20.0%
!! GAAACTTTGTAAATTATTGA+GGG - chr5_3:68889310-68889329 Msa0827550:intron 20.0%
!! CTCATCATATAATAAATAAC+AGG + chr5_3:68889584-68889603 None:intergenic 20.0%
!! GATGAGATGTTAAATTAATA+AGG - chr5_3:68889598-68889617 Msa0827550:intron 20.0%
!! GTAAAAAATTATAACTACGT+TGG - chr5_3:68890709-68890728 Msa0827550:intron 20.0%
!! AAATTAAATCTGTACTATGT+TGG - chr5_3:68890870-68890889 Msa0827550:intron 20.0%
!!! ATATATTTTTACAGTTGTTC+AGG + chr5_3:68890963-68890982 None:intergenic 20.0%
!! ACAACTGTAAAAATATATTC+TGG - chr5_3:68890965-68890984 Msa0827550:intron 20.0%
!! CAACTGTAAAAATATATTCT+GGG - chr5_3:68890966-68890985 Msa0827550:intron 20.0%
!! CTGAAATATGTAATAATTAG+GGG + chr5_3:68891272-68891291 None:intergenic 20.0%
!! GCTGAAATATGTAATAATTA+GGG + chr5_3:68891273-68891292 None:intergenic 20.0%
!! AGCTGAAATATGTAATAATT+AGG + chr5_3:68891274-68891293 None:intergenic 20.0%
!!! ATTATTTTCAATGAACTACT+CGG + chr5_3:68891532-68891551 None:intergenic 20.0%
!! GTATACAAAATTCCAAATTA+GGG + chr5_3:68891668-68891687 None:intergenic 20.0%
!! AGTATACAAAATTCCAAATT+AGG + chr5_3:68891669-68891688 None:intergenic 20.0%
!!! AATTAATTAGTTCTTGATGT+CGG - chr5_3:68891771-68891790 Msa0827550:intron 20.0%
!! ATAAATTTAACATATCTTGG+AGG - chr5_3:68892167-68892186 Msa0827550:intron 20.0%
!!! TTTTCTATTTTCCAAAACAA+AGG + chr5_3:68892240-68892259 None:intergenic 20.0%
!! CTAAGATATAAACTATAAGA+TGG - chr5_3:68892651-68892670 Msa0827550:intron 20.0%
!! ATATAAACTATAAGATGGAT+GGG - chr5_3:68892656-68892675 Msa0827550:intron 20.0%
!! ATTTAAGCGAGAAAAAAATT+AGG - chr5_3:68892682-68892701 Msa0827550:intron 20.0%
!! AACAGATTATTGGAAAATTA+GGG - chr5_3:68892956-68892975 Msa0827550:intron 20.0%
!!! TTCATTTTAGTACTTTGTTA+TGG + chr5_3:68893068-68893087 None:intergenic 20.0%
!! TACTAAAATGAAATAGAGAA+AGG - chr5_3:68893076-68893095 Msa0827550:intron 20.0%
!!! ATTTTATAATGAAAAGAGAG+TGG - chr5_3:68893471-68893490 Msa0827550:intron 20.0%
!!! TTTTATAATGAAAAGAGAGT+GGG - chr5_3:68893472-68893491 Msa0827550:intron 20.0%
!!! TTTTTCTTTTTTTGAGTTAG+TGG + chr5_3:68893674-68893693 None:intergenic 20.0%
!! ATTTGGATTATTGAACTATT+GGG + chr5_3:68893929-68893948 None:intergenic 20.0%
!! TATTTGGATTATTGAACTAT+TGG + chr5_3:68893930-68893949 None:intergenic 20.0%
!! TACTGGTATTATATTCTATT+TGG - chr5_3:68894230-68894249 Msa0827550:intron 20.0%
!! TAAATAATAGATACTTGAAC+TGG + chr5_3:68894332-68894351 None:intergenic 20.0%
!! ATTTCAAAACTTAAGCTATT+AGG - chr5_3:68895093-68895112 Msa0827550:intron 20.0%
!! TTTGACCAATATTCTAATTA+AGG - chr5_3:68896197-68896216 Msa0827550:intron 20.0%
!!! TGATAATGAACTATCATTTA+AGG - chr5_3:68896840-68896859 Msa0827550:intron 20.0%
!!! AATATGTTTTTATATTCTGC+AGG - chr5_3:68897176-68897195 Msa0827550:intron 20.0%
!!! ATATGTTTTTATATTCTGCA+GGG - chr5_3:68897177-68897196 Msa0827550:intron 20.0%
!!! TCATATTTTCTTGACAAATT+AGG + chr5_3:68897248-68897267 None:intergenic 20.0%
! AAAGAAGAACATAATCAACT+TGG - chr5_3:68888124-68888143 Msa0827550:CDS 25.0%
! AAGAAGAACATAATCAACTT+GGG - chr5_3:68888125-68888144 Msa0827550:CDS 25.0%
! TGTAAATACCTTAATTTCAG+AGG + chr5_3:68888158-68888177 None:intergenic 25.0%
! ATCAATTCACTTGCAAATAT+TGG + chr5_3:68888195-68888214 None:intergenic 25.0%
!! ATTTTTGTCCTTTCTAAACA+TGG - chr5_3:68888624-68888643 Msa0827550:intron 25.0%
! GAGCAAAATAATTGTGATTA+TGG - chr5_3:68888819-68888838 Msa0827550:intron 25.0%
! GAACAAATGCAAATGAAAAA+AGG - chr5_3:68889001-68889020 Msa0827550:intron 25.0%
!! CTCGAAGAACAAAAATTTTA+AGG - chr5_3:68889149-68889168 Msa0827550:intron 25.0%
! TTTCAGATCTATTAATGAGT+AGG + chr5_3:68889284-68889303 None:intergenic 25.0%
! TTTGTAAATTATTGAGGGAA+AGG - chr5_3:68889315-68889334 Msa0827550:intron 25.0%
! TTGTAAATTATTGAGGGAAA+GGG - chr5_3:68889316-68889335 Msa0827550:intron 25.0%
! ATAAAATTACCTGGTATCAT+AGG + chr5_3:68889398-68889417 None:intergenic 25.0%
!! ATGATACCAGGTAATTTTAT+TGG - chr5_3:68889398-68889417 Msa0827550:intron 25.0%
! TTTGAAAGTGACAGTTAAAT+AGG + chr5_3:68889526-68889545 None:intergenic 25.0%
!!! TCTAAAAAATGTTCTAAAGG+CGG + chr5_3:68889719-68889738 None:intergenic 25.0%
! ACGTCTAAAAAATGTTCTAA+AGG + chr5_3:68889722-68889741 None:intergenic 25.0%
! AGACGTGACATATAATTATA+GGG + chr5_3:68889759-68889778 None:intergenic 25.0%
! AAGACGTGACATATAATTAT+AGG + chr5_3:68889760-68889779 None:intergenic 25.0%
! TATCACTTTCTTCTCTTAAA+AGG - chr5_3:68889903-68889922 Msa0827550:intron 25.0%
! GATGGAAACATTTCATAAAA+GGG - chr5_3:68890269-68890288 Msa0827550:intron 25.0%
! GAATGAAACAATATACATTC+TGG + chr5_3:68890547-68890566 None:intergenic 25.0%
!! TTTCATTCATTTTCCAGTTT+TGG - chr5_3:68890559-68890578 Msa0827550:intron 25.0%
! TATTATTTAATGTAGTGCCT+GGG + chr5_3:68890912-68890931 None:intergenic 25.0%
! CTTTCTGTTGTAAAAAAGTT+GGG + chr5_3:68891077-68891096 None:intergenic 25.0%
! ACATATTCTCAATGTATGTA+CGG + chr5_3:68891158-68891177 None:intergenic 25.0%
! TTATTACATATTTCAGCTAG+TGG - chr5_3:68891276-68891295 Msa0827550:intron 25.0%
! TATTACATATTTCAGCTAGT+GGG - chr5_3:68891277-68891296 Msa0827550:intron 25.0%
!! AGATCTTCTTAAGTGTTTTA+TGG + chr5_3:68891411-68891430 None:intergenic 25.0%
! ATTGTGGAATGAGATTATAT+TGG + chr5_3:68891456-68891475 None:intergenic 25.0%
!! TTATTTTCAATGAACTACTC+GGG + chr5_3:68891531-68891550 None:intergenic 25.0%
!!! GATCTTATTTTTAGTGTTGA+TGG - chr5_3:68891560-68891579 Msa0827550:intron 25.0%
!!! TTTGGAATTTTGTATACTAG+TGG - chr5_3:68891671-68891690 Msa0827550:intron 25.0%
! ACACTAATTAACAATCAAAG+CGG + chr5_3:68891718-68891737 None:intergenic 25.0%
!!! TATTTTGGTTTTATCTGGTT+GGG - chr5_3:68891842-68891861 Msa0827550:intron 25.0%
!! ATTTGGTATCTCAATGTTTT+CGG - chr5_3:68891945-68891964 Msa0827550:intron 25.0%
!! TTTTATATTACACAACAGCA+AGG - chr5_3:68891968-68891987 Msa0827550:intron 25.0%
! TTAGGTAAAAACACAAGATA+AGG - chr5_3:68892110-68892129 Msa0827550:intron 25.0%
!! CAAAACAAAGGTTTTACTTT+TGG + chr5_3:68892228-68892247 None:intergenic 25.0%
!!! CAAAAGTAAAACCTTTGTTT+TGG - chr5_3:68892226-68892245 Msa0827550:intron 25.0%
!!! CTTTTCTTTAAAATCTGCTA+AGG + chr5_3:68892390-68892409 None:intergenic 25.0%
! AGTTTACTTGTGTTTAGATT+TGG + chr5_3:68892443-68892462 None:intergenic 25.0%
! ACACTACGATAAATTCTAAT+AGG - chr5_3:68892544-68892563 Msa0827550:intron 25.0%
! GATATAAACTATAAGATGGA+TGG - chr5_3:68892655-68892674 Msa0827550:intron 25.0%
! TATAAACTATAAGATGGATG+GGG - chr5_3:68892657-68892676 Msa0827550:intron 25.0%
! TCGATATGATATTGTCTTAA+AGG - chr5_3:68892712-68892731 Msa0827550:intron 25.0%
!! TTGTTATGTCTTTGAAAACA+GGG + chr5_3:68892846-68892865 None:intergenic 25.0%
!!! ATAATCTGTTGTTTTTTGAC+AGG + chr5_3:68892946-68892965 None:intergenic 25.0%
! GTCAAAAAACAACAGATTAT+TGG - chr5_3:68892946-68892965 Msa0827550:intron 25.0%
! CAACAGATTATTGGAAAATT+AGG - chr5_3:68892955-68892974 Msa0827550:intron 25.0%
! AGGTTACTGCAATATTTAAT+TGG - chr5_3:68893096-68893115 Msa0827550:intron 25.0%
! TACTGCAATATTTAATTGGT+AGG - chr5_3:68893100-68893119 Msa0827550:intron 25.0%
! CATGAAATTTATGAATGGAA+GGG + chr5_3:68893246-68893265 None:intergenic 25.0%
!! AATTTCCAACAACTTTAGAA+GGG + chr5_3:68893279-68893298 None:intergenic 25.0%
!! GAAAAAACTAAGGTGTTTAT+AGG - chr5_3:68893814-68893833 Msa0827550:intron 25.0%
! TTTGGATTATTGAACTATTG+GGG + chr5_3:68893928-68893947 None:intergenic 25.0%
!!! TTGATTTGCAAAGTTCTATT+TGG + chr5_3:68893946-68893965 None:intergenic 25.0%
! ATAGAACTTTGCAAATCAAT+TGG - chr5_3:68893947-68893966 Msa0827550:intron 25.0%
! AAACATGGTACAGATATTTA+GGG - chr5_3:68894081-68894100 Msa0827550:intron 25.0%
!! GATAGTTGCATTCAAATTTT+TGG + chr5_3:68894108-68894127 None:intergenic 25.0%
! AAATTAGCAAACCACAATAA+TGG + chr5_3:68894171-68894190 None:intergenic 25.0%
!!! AATGGATTATACTAGAATGA+GGG + chr5_3:68894643-68894662 None:intergenic 25.0%
!!! TAATGGATTATACTAGAATG+AGG + chr5_3:68894644-68894663 None:intergenic 25.0%
! CATTCTAGTATAATCCATTA+TGG - chr5_3:68894644-68894663 Msa0827550:intron 25.0%
! AATAGTCGTGTAATGAAAAA+AGG - chr5_3:68894904-68894923 Msa0827550:intron 25.0%
! AAAAAGGTGACAACTTAAAT+TGG - chr5_3:68894920-68894939 Msa0827550:intron 25.0%
! TTGAAATGAAAGCTCAATAT+TGG + chr5_3:68895080-68895099 None:intergenic 25.0%
! ACTTAAGCTATTAGGAAAAT+TGG - chr5_3:68895101-68895120 Msa0827550:intron 25.0%
!!! ACTTTTGTTTAGAAGTATAG+AGG + chr5_3:68895180-68895199 None:intergenic 25.0%
! GAATTAAGCGTTTAGTATAT+TGG + chr5_3:68895411-68895430 None:intergenic 25.0%
! CTAAACGCTTAATTCTTAAT+TGG - chr5_3:68895416-68895435 Msa0827550:intron 25.0%
! AGAATGCACAAATATTACAT+TGG - chr5_3:68895538-68895557 Msa0827550:intron 25.0%
!!! AAAAAAGTGTTCATAACTGA+TGG - chr5_3:68895625-68895644 Msa0827550:intron 25.0%
! GTATTTAAGCCTATTCTAAT+CGG - chr5_3:68895718-68895737 Msa0827550:intron 25.0%
! TATTTAAGCCTATTCTAATC+GGG - chr5_3:68895719-68895738 Msa0827550:intron 25.0%
!!! TTTTACAGCCAAGTTTTATA+TGG - chr5_3:68895859-68895878 Msa0827550:intron 25.0%
! TAACTCAACCATATAAAACT+TGG + chr5_3:68895870-68895889 None:intergenic 25.0%
!!! AAGTTTTATATGGTTGAGTT+AGG - chr5_3:68895869-68895888 Msa0827550:intron 25.0%
! ATCCTCCTTAATTAGAATAT+TGG + chr5_3:68896205-68896224 None:intergenic 25.0%
! TGATAAAAGTTTGAACAATG+AGG + chr5_3:68896229-68896248 None:intergenic 25.0%
!! ATTTGAACTTAGAGAAGTAT+TGG + chr5_3:68896538-68896557 None:intergenic 25.0%
! AAGAATACTGATAATTCCTT+AGG - chr5_3:68896650-68896669 Msa0827550:intron 25.0%
!! ATACATCTAAAACATTCCTA+AGG + chr5_3:68896669-68896688 None:intergenic 25.0%
!! AATACAGCTGAAAATCTTTT+TGG - chr5_3:68896794-68896813 Msa0827550:intron 25.0%
! CTAATAATGAAATGTTTGGA+TGG + chr5_3:68896869-68896888 None:intergenic 25.0%
! CATGCTAATAATGAAATGTT+TGG + chr5_3:68896873-68896892 None:intergenic 25.0%
!! CATTATTAGCATGATTTTAC+AGG - chr5_3:68896880-68896899 Msa0827550:intron 25.0%
!! ATGATTTTACAGGCAAATAA+TGG - chr5_3:68896890-68896909 Msa0827550:intron 25.0%
!! TGATTTTACAGGCAAATAAT+GGG - chr5_3:68896891-68896910 Msa0827550:intron 25.0%
! AATACAAGAACTAAATCGAA+AGG - chr5_3:68897102-68897121 Msa0827550:intron 25.0%
! TTTCTTAATTTCTCCATTTG+AGG + chr5_3:68897133-68897152 None:intergenic 25.0%
!!! TATGTTTTTATATTCTGCAG+GGG - chr5_3:68897178-68897197 Msa0827550:intron 25.0%
!! GAAATTGAAAAAGAAGGTAT+TGG - chr5_3:68897266-68897285 Msa0827550:intron 25.0%
! TATGGAACAAAAGATAAGAA+TGG - chr5_3:68897399-68897418 Msa0827550:intron 25.0%
GTGAATTGATCATATAGTTG+CGG - chr5_3:68888205-68888224 Msa0827550:CDS 30.0%
TGAATTGATCATATAGTTGC+GGG - chr5_3:68888206-68888225 Msa0827550:CDS 30.0%
GAAGAGTTCACATTTATAGT+AGG + chr5_3:68888248-68888267 None:intergenic 30.0%
!!! TTCCAACACACTTTTTTGAT+TGG - chr5_3:68888302-68888321 Msa0827550:intron 30.0%
! AACCAATCAAAAAAGTGTGT+TGG + chr5_3:68888307-68888326 None:intergenic 30.0%
! TGTTGCTAACATTCTCTTTT+AGG - chr5_3:68888439-68888458 Msa0827550:intron 30.0%
TAATTTGAACCAGTGAAAGT+TGG - chr5_3:68888469-68888488 Msa0827550:intron 30.0%
CATAAGATCCATGTTTAGAA+AGG + chr5_3:68888635-68888654 None:intergenic 30.0%
ATGATTGTTCATATGTTGCT+GGG + chr5_3:68888699-68888718 None:intergenic 30.0%
CTGTGTTTGAGAAAACATAT+TGG - chr5_3:68888850-68888869 Msa0827550:intron 30.0%
TTGAGAAAACATATTGGTGA+CGG - chr5_3:68888856-68888875 Msa0827550:intron 30.0%
!!! TAATGGATTTTTAGATGCAC+AGG - chr5_3:68888931-68888950 Msa0827550:intron 30.0%
TGTAAATTATTGAGGGAAAG+GGG - chr5_3:68889317-68889336 Msa0827550:intron 30.0%
TGGTATCATAGGTTATATTC+CGG + chr5_3:68889387-68889406 None:intergenic 30.0%
! TTATGTTCTTTTCCCAAGTA+TGG - chr5_3:68889842-68889861 Msa0827550:intron 30.0%
TCTTTGAATACTCCATACTT+GGG + chr5_3:68889857-68889876 None:intergenic 30.0%
ATAGACCACAGTTTCATATA+AGG + chr5_3:68889982-68890001 None:intergenic 30.0%
GTCTATAGTAACTAGAGTAT+AGG - chr5_3:68889996-68890015 Msa0827550:intron 30.0%
AAACATGAATTAAGTTCCTG+CGG + chr5_3:68890034-68890053 None:intergenic 30.0%
! TAGGAAGTGCAATATGAAAA+AGG - chr5_3:68890229-68890248 Msa0827550:intron 30.0%
GGATGGAAACATTTCATAAA+AGG - chr5_3:68890268-68890287 Msa0827550:intron 30.0%
! AACATTTCATAAAAGGGCAT+AGG - chr5_3:68890275-68890294 Msa0827550:intron 30.0%
ACAATATGTCTGAAGATTTC+TGG - chr5_3:68890323-68890342 Msa0827550:intron 30.0%
CAATATGTCTGAAGATTTCT+GGG - chr5_3:68890324-68890343 Msa0827550:intron 30.0%
CAAAACAACAAAAAAGAGTG+TGG - chr5_3:68890667-68890686 Msa0827550:intron 30.0%
CTATTATTTAATGTAGTGCC+TGG + chr5_3:68890913-68890932 None:intergenic 30.0%
GCTTTCTGTTGTAAAAAAGT+TGG + chr5_3:68891078-68891097 None:intergenic 30.0%
GTACATACATTGAGAATATG+TGG - chr5_3:68891157-68891176 Msa0827550:intron 30.0%
! TTAACGTAGGTAACACTTTT+TGG + chr5_3:68891193-68891212 None:intergenic 30.0%
TGATGTATGTTCATTAACGT+AGG + chr5_3:68891206-68891225 None:intergenic 30.0%
TCATCATCTTAGTAGCAAAA+GGG + chr5_3:68891231-68891250 None:intergenic 30.0%
TTCATCATCTTAGTAGCAAA+AGG + chr5_3:68891232-68891251 None:intergenic 30.0%
! TATTTTCAATGAACTACTCG+GGG + chr5_3:68891530-68891549 None:intergenic 30.0%
TTCCAAATTAGGGATGTTAA+CGG + chr5_3:68891658-68891677 None:intergenic 30.0%
GGATTAGATCAAGAAATAAC+CGG - chr5_3:68891692-68891711 Msa0827550:intron 30.0%
!!! CTGTTTTGGTTAATCTAGTT+TGG - chr5_3:68891807-68891826 Msa0827550:intron 30.0%
!!! GTCAGTATTTTGGTTTTATC+TGG - chr5_3:68891837-68891856 Msa0827550:intron 30.0%
!!! GTATTTTGGTTTTATCTGGT+TGG - chr5_3:68891841-68891860 Msa0827550:intron 30.0%
! TTTTATCTGGTTGGGTATTT+TGG - chr5_3:68891850-68891869 Msa0827550:intron 30.0%
GGTATCTGGTATTTGTAATA+TGG - chr5_3:68891876-68891895 Msa0827550:intron 30.0%
CTGGTATTTGTAATATGGTT+TGG - chr5_3:68891881-68891900 Msa0827550:intron 30.0%
CATGGTATTAGTATATGATC+CGG - chr5_3:68891914-68891933 Msa0827550:intron 30.0%
GCAAATTAATGTACCAAATG+AGG + chr5_3:68891994-68892013 None:intergenic 30.0%
CAATGTTAAATTGAGCAAGT+TGG + chr5_3:68892016-68892035 None:intergenic 30.0%
! GTTTTTACCTAAAACAGCAT+AGG + chr5_3:68892102-68892121 None:intergenic 30.0%
!!! TTATTTTCTGAAGCACTAAC+AGG + chr5_3:68892343-68892362 None:intergenic 30.0%
!! TTCTTTAAAATCTGCTAAGG+TGG + chr5_3:68892387-68892406 None:intergenic 30.0%
TTACTTGTGTTTAGATTTGG+AGG + chr5_3:68892440-68892459 None:intergenic 30.0%
!! TCTAATAGGTTTGTTAGTTG+AGG - chr5_3:68892558-68892577 Msa0827550:intron 30.0%
!! CTAATAGGTTTGTTAGTTGA+GGG - chr5_3:68892559-68892578 Msa0827550:intron 30.0%
TTAGTTAGGATTGTTTAGAG+AGG - chr5_3:68892598-68892617 Msa0827550:intron 30.0%
TAGTTAGGATTGTTTAGAGA+GGG - chr5_3:68892599-68892618 Msa0827550:intron 30.0%
AAGGAAAATTTGAGAAGCAA+AGG - chr5_3:68892731-68892750 Msa0827550:intron 30.0%
AATGTAGTAACTTAGAAGTG+AGG - chr5_3:68892783-68892802 Msa0827550:intron 30.0%
! CTTGTTATGTCTTTGAAAAC+AGG + chr5_3:68892847-68892866 None:intergenic 30.0%
TATTGGAAAATTAGGGAACA+TGG - chr5_3:68892963-68892982 Msa0827550:intron 30.0%
TATTTAAGCGTAGAAAGAGA+TGG - chr5_3:68892993-68893012 Msa0827550:intron 30.0%
ATTTAAGCGTAGAAAGAGAT+GGG - chr5_3:68892994-68893013 Msa0827550:intron 30.0%
AGTATTAAAATCTCCAACTG+TGG - chr5_3:68893024-68893043 Msa0827550:intron 30.0%
TGATCTTATATTTCCACAGT+TGG + chr5_3:68893040-68893059 None:intergenic 30.0%
GTCAAAGAACATTAGACTAT+TGG - chr5_3:68893126-68893145 Msa0827550:intron 30.0%
ACATTGATGAAAACAAGTAG+AGG + chr5_3:68893221-68893240 None:intergenic 30.0%
GCATGAAATTTATGAATGGA+AGG + chr5_3:68893247-68893266 None:intergenic 30.0%
CCAAGCATGAAATTTATGAA+TGG + chr5_3:68893251-68893270 None:intergenic 30.0%
CCATTCATAAATTTCATGCT+TGG - chr5_3:68893248-68893267 Msa0827550:intron 30.0%
!!! TTTTACCCTTCTAAAGTTGT+TGG - chr5_3:68893271-68893290 Msa0827550:intron 30.0%
CAATTTCCAACAACTTTAGA+AGG + chr5_3:68893280-68893299 None:intergenic 30.0%
ATTAAGAGAGATAGATAGCT+AGG - chr5_3:68893495-68893514 Msa0827550:intron 30.0%
! TCTTCTTGTTTGTTCTCAAT+GGG + chr5_3:68893727-68893746 None:intergenic 30.0%
GTGAGAACAAGAAAAAACTA+AGG - chr5_3:68893804-68893823 Msa0827550:intron 30.0%
! AAAACTAAGGTGTTTATAGG+CGG - chr5_3:68893817-68893836 Msa0827550:intron 30.0%
TTGGATTATTGAACTATTGG+GGG + chr5_3:68893927-68893946 None:intergenic 30.0%
GAAACATGGTACAGATATTT+AGG - chr5_3:68894080-68894099 Msa0827550:intron 30.0%
AACATGGTACAGATATTTAG+GGG - chr5_3:68894082-68894101 Msa0827550:intron 30.0%
ATATAATACCAGTAACACAC+TGG + chr5_3:68894224-68894243 None:intergenic 30.0%
ATAATAGATACTTGAACTGG+TGG + chr5_3:68894329-68894348 None:intergenic 30.0%
! ATCAGTTACAAATTAGCCTA+TGG + chr5_3:68894395-68894414 None:intergenic 30.0%
!! AACTGATAGAGTTTTGTACT+TGG - chr5_3:68894408-68894427 Msa0827550:intron 30.0%
CCTTTATTCTTGTCAAATTG+GGG + chr5_3:68894509-68894528 None:intergenic 30.0%
CCCTTTATTCTTGTCAAATT+GGG + chr5_3:68894510-68894529 None:intergenic 30.0%
CCCAATTTGACAAGAATAAA+GGG - chr5_3:68894507-68894526 Msa0827550:intron 30.0%
CCAATTTGACAAGAATAAAG+GGG - chr5_3:68894508-68894527 Msa0827550:intron 30.0%
!!! CCTTAATTTTGATTTGGCTT+TGG + chr5_3:68894570-68894589 None:intergenic 30.0%
CCAAAGCCAAATCAAAATTA+AGG - chr5_3:68894567-68894586 Msa0827550:intron 30.0%
AAGCCAAATCAAAATTAAGG+AGG - chr5_3:68894570-68894589 Msa0827550:intron 30.0%
TACTAAATTCAAGGCCATAA+TGG + chr5_3:68894661-68894680 None:intergenic 30.0%
AGGCATCTATACTAAATTCA+AGG + chr5_3:68894670-68894689 None:intergenic 30.0%
TGAATTTAGTATAGATGCCT+TGG - chr5_3:68894670-68894689 Msa0827550:intron 30.0%
GAATTTAGTATAGATGCCTT+GGG - chr5_3:68894671-68894690 Msa0827550:intron 30.0%
CACTTTATGGAGTTAATACT+TGG + chr5_3:68894823-68894842 None:intergenic 30.0%
CAAGTATTAACTCCATAAAG+TGG - chr5_3:68894821-68894840 Msa0827550:intron 30.0%
TTAACTCCATAAAGTGGTTA+AGG - chr5_3:68894827-68894846 Msa0827550:intron 30.0%
TAGTATATTGGTATAGACAG+TGG + chr5_3:68895399-68895418 None:intergenic 30.0%
! CATAACTGGAGTATCTTATA+AGG + chr5_3:68895661-68895680 None:intergenic 30.0%
ATAAGATACTCCAGTTATGT+AGG - chr5_3:68895662-68895681 Msa0827550:intron 30.0%
!!! TCCTAAGTCAAGTTTTAAGA+TGG - chr5_3:68895696-68895715 Msa0827550:intron 30.0%
ACCATCTTAAAACTTGACTT+AGG + chr5_3:68895700-68895719 None:intergenic 30.0%
ATTTAAGCCTATTCTAATCG+GGG - chr5_3:68895720-68895739 Msa0827550:intron 30.0%
!!! ACCTCATATAAGCACTTTTT+TGG + chr5_3:68895824-68895843 None:intergenic 30.0%
AAACTTGGCTGTAAAATAAG+AGG + chr5_3:68895855-68895874 None:intergenic 30.0%
CCAGATTAACATCTTAGAAT+TGG + chr5_3:68895902-68895921 None:intergenic 30.0%
!! CCAATTCTAAGATGTTAATC+TGG - chr5_3:68895899-68895918 Msa0827550:intron 30.0%
!! TTAAGTAGAGGTGTTAATCA+AGG - chr5_3:68896127-68896146 Msa0827550:intron 30.0%
GACCAATATTCTAATTAAGG+AGG - chr5_3:68896200-68896219 Msa0827550:intron 30.0%
GAATTCGTTGTTTGTAACAT+GGG + chr5_3:68896295-68896314 None:intergenic 30.0%
TGAATTCGTTGTTTGTAACA+TGG + chr5_3:68896296-68896315 None:intergenic 30.0%
! TGTTATGTTATCTTTCTAGC+AGG + chr5_3:68896399-68896418 None:intergenic 30.0%
CTAGAAAGATAACATAACAC+AGG - chr5_3:68896400-68896419 Msa0827550:intron 30.0%
! AGATGTGCAATAGAACTTTT+CGG - chr5_3:68896491-68896510 Msa0827550:intron 30.0%
TCATCGTTTAAGAGTTAAGA+AGG - chr5_3:68896600-68896619 Msa0827550:intron 30.0%
! AAAATCTCGAGTACGATTTT+AGG - chr5_3:68896623-68896642 Msa0827550:intron 30.0%
GATAGTTCATTATCAAGAGT+AGG + chr5_3:68896835-68896854 None:intergenic 30.0%
!! ATAATGGGTGAAGAATTATC+AGG - chr5_3:68896906-68896925 Msa0827550:intron 30.0%
TTTGACAGTCAAAGAATTAC+AGG - chr5_3:68896929-68896948 Msa0827550:intron 30.0%
TTGACAGTCAAAGAATTACA+GGG - chr5_3:68896930-68896949 Msa0827550:intron 30.0%
!! CTTGAGAACTGTATTTTTGA+TGG + chr5_3:68897016-68897035 None:intergenic 30.0%
AGTCAATTGTATGTCAAGTA+TGG + chr5_3:68897055-68897074 None:intergenic 30.0%
!! ATGTTTTTATATTCTGCAGG+GGG - chr5_3:68897179-68897198 Msa0827550:intron 30.0%
!! AAAGAAGGTATTGGTTTGTA+TGG - chr5_3:68897275-68897294 Msa0827550:intron 30.0%
! GAGTTAGTGAAAATCTCTTT+TGG + chr5_3:68897374-68897393 None:intergenic 30.0%
! AAAGAGATTTTCACTAACTC+AGG - chr5_3:68897374-68897393 Msa0827550:intron 30.0%
GAATTGATCATATAGTTGCG+GGG - chr5_3:68888207-68888226 Msa0827550:CDS 35.0%
TGAGACCCACCAAATTTATA+CGG + chr5_3:68888365-68888384 None:intergenic 35.0%
ATCTATGGTCAGCTTTCAAT+TGG + chr5_3:68888508-68888527 None:intergenic 35.0%
ATATGGAAGGTTGTGATTGA+AGG - chr5_3:68888541-68888560 Msa0827550:intron 35.0%
! AGGACAAAAATTTTCCTGTG+CGG + chr5_3:68888615-68888634 None:intergenic 35.0%
GATGATTGTTCATATGTTGC+TGG + chr5_3:68888700-68888719 None:intergenic 35.0%
CATCATCTTCTTTCTAACTC+CGG - chr5_3:68888749-68888768 Msa0827550:intron 35.0%
!! AACAGATGGGTTATCACAAA+GGG + chr5_3:68888790-68888809 None:intergenic 35.0%
!! TAACAGATGGGTTATCACAA+AGG + chr5_3:68888791-68888810 None:intergenic 35.0%
ATAACCCATCTGTTATACAG+TGG - chr5_3:68888796-68888815 Msa0827550:intron 35.0%
TAACCCATCTGTTATACAGT+GGG - chr5_3:68888797-68888816 Msa0827550:intron 35.0%
GAAGGAAAATCAGAATGTCT+TGG - chr5_3:68888887-68888906 Msa0827550:intron 35.0%
! ATTTTTGTTCTTCGAGCTTC+TGG + chr5_3:68889145-68889164 None:intergenic 35.0%
GGAATATAACCTATGATACC+AGG - chr5_3:68889386-68889405 Msa0827550:intron 35.0%
CTTGGACCAATAAAATTACC+TGG + chr5_3:68889407-68889426 None:intergenic 35.0%
! GTAATTTTATTGGTCCAAGC+TGG - chr5_3:68889408-68889427 Msa0827550:intron 35.0%
TCTTACTGAAGTGAGAACAA+AGG - chr5_3:68889776-68889795 Msa0827550:intron 35.0%
GTCTTTGAATACTCCATACT+TGG + chr5_3:68889858-68889877 None:intergenic 35.0%
GAACACCTTATATGAAACTG+TGG - chr5_3:68889974-68889993 Msa0827550:intron 35.0%
GCAGGAACTTAATTCATGTT+TGG - chr5_3:68890033-68890052 Msa0827550:intron 35.0%
AAACATGCACTTAGTACAGT+AGG - chr5_3:68890118-68890137 Msa0827550:intron 35.0%
TAAGAATATGCCTTTGGTTG+CGG + chr5_3:68890211-68890230 None:intergenic 35.0%
ACTTCCTAAGAATATGCCTT+TGG + chr5_3:68890217-68890236 None:intergenic 35.0%
AAAGGAACTACAAAGAAGAG+TGG - chr5_3:68890247-68890266 Msa0827550:intron 35.0%
CAGACATATTGTTTGCACAA+AGG + chr5_3:68890315-68890334 None:intergenic 35.0%
ACATTGAACACAACTCTTCA+GGG + chr5_3:68890448-68890467 None:intergenic 35.0%
AACATTGAACACAACTCTTC+AGG + chr5_3:68890449-68890468 None:intergenic 35.0%
ACATTCTGATTGGATGTTAG+AGG + chr5_3:68890518-68890537 None:intergenic 35.0%
CTGGTTAGATACATTCTGAT+TGG + chr5_3:68890528-68890547 None:intergenic 35.0%
!! TCATTTTCCAGTTTTGGCAA+AGG - chr5_3:68890565-68890584 Msa0827550:intron 35.0%
!! CATTTTCCAGTTTTGGCAAA+GGG - chr5_3:68890566-68890585 Msa0827550:intron 35.0%
! AAATATGTTGAAGGGTGTAC+CGG + chr5_3:68890638-68890657 None:intergenic 35.0%
!! AAACACATGCGAAGTTTTGA+GGG + chr5_3:68890736-68890755 None:intergenic 35.0%
CTTTAGACTAGAGCATATTC+CGG - chr5_3:68890806-68890825 Msa0827550:intron 35.0%
!!! TTCTGTTTTTGACCGAAGTA+GGG + chr5_3:68891102-68891121 None:intergenic 35.0%
!!! TTTCTGTTTTTGACCGAAGT+AGG + chr5_3:68891103-68891122 None:intergenic 35.0%
AGAAAACACCATACTAGAAG+AGG - chr5_3:68891118-68891137 Msa0827550:intron 35.0%
GAAAACACCATACTAGAAGA+GGG - chr5_3:68891119-68891138 Msa0827550:intron 35.0%
! TGTTTTTCCCTCTTCTAGTA+TGG + chr5_3:68891129-68891148 None:intergenic 35.0%
AATACTGAGTAGCTGAATAG+TGG + chr5_3:68891325-68891344 None:intergenic 35.0%
ACTATTCAGCTACTCAGTAT+TGG - chr5_3:68891324-68891343 Msa0827550:intron 35.0%
GCATAAGACATGAGTTATTG+TGG + chr5_3:68891472-68891491 None:intergenic 35.0%
! CTCAAAATTTTGCCTCTTGA+GGG - chr5_3:68891497-68891516 Msa0827550:intron 35.0%
TCCAAATTAGGGATGTTAAC+GGG + chr5_3:68891657-68891676 None:intergenic 35.0%
TAATTAACAATCAAAGCGGC+CGG + chr5_3:68891714-68891733 None:intergenic 35.0%
! TGGTATCAGAGTCAGTATTT+TGG - chr5_3:68891827-68891846 Msa0827550:intron 35.0%
AGATACCAAATGATCTAGAC+CGG + chr5_3:68891936-68891955 None:intergenic 35.0%
ATAGGAAATGAGTAGCAAAG+TGG + chr5_3:68892084-68892103 None:intergenic 35.0%
!!! CTCATTTCCTATGCTGTTTT+AGG - chr5_3:68892092-68892111 Msa0827550:intron 35.0%
AGCATGATCTTTACGCAAAT+TGG - chr5_3:68892197-68892216 Msa0827550:intron 35.0%
GTTTGTTTAACGCATGTTTG+AGG - chr5_3:68892292-68892311 Msa0827550:intron 35.0%
AACAGGTTTACTCATGTAGT+TGG + chr5_3:68892326-68892345 None:intergenic 35.0%
GTATAATATGGGATTTCGCT+TGG + chr5_3:68892490-68892509 None:intergenic 35.0%
TTAGAGTGAGTGCTTTAGTT+AGG - chr5_3:68892584-68892603 Msa0827550:intron 35.0%
! GTTACGTAGTTTGTAAGTTG+TGG - chr5_3:68893330-68893349 Msa0827550:intron 35.0%
!! TCCATTGACTTGAACCAAAT+TGG - chr5_3:68893363-68893382 Msa0827550:intron 35.0%
! TCCAATTTGGTTCAAGTCAA+TGG + chr5_3:68893367-68893386 None:intergenic 35.0%
ATGAAAGAGAGGATCCAATT+TGG + chr5_3:68893380-68893399 None:intergenic 35.0%
TGGAGACATAAATGAAAGAG+AGG + chr5_3:68893391-68893410 None:intergenic 35.0%
TAAGAGAGAGATCAAGAGTT+AGG + chr5_3:68893421-68893440 None:intergenic 35.0%
ATAGATAGCTAGGAAAGAGA+TGG - chr5_3:68893505-68893524 Msa0827550:intron 35.0%
GGAAAGAGATGATTCAAATC+CGG - chr5_3:68893538-68893557 Msa0827550:intron 35.0%
CTACTATGTCACACTCTAAT+TGG - chr5_3:68893612-68893631 Msa0827550:intron 35.0%
!!! TTAGTGGTTTTGATACCAGT+TGG + chr5_3:68893658-68893677 None:intergenic 35.0%
! CTTCTTGTTTGTTCTCAATG+GGG + chr5_3:68893726-68893745 None:intergenic 35.0%
! CTCTTCTTGTTTGTTCTCAA+TGG + chr5_3:68893728-68893747 None:intergenic 35.0%
! TTTTCTTGTTCTCACCTATG+TGG + chr5_3:68893799-68893818 None:intergenic 35.0%
! ATTTGTGCTTCTAAGTGTTG+AGG + chr5_3:68893885-68893904 None:intergenic 35.0%
TGGATTATTGAACTATTGGG+GGG + chr5_3:68893926-68893945 None:intergenic 35.0%
TCCTAGTAGACTTCTATAAG+CGG + chr5_3:68894034-68894053 None:intergenic 35.0%
TATCTGTACCATGTTTCCAT+CGG + chr5_3:68894077-68894096 None:intergenic 35.0%
TTGAATTACCAGTGTGTTAC+TGG - chr5_3:68894213-68894232 Msa0827550:intron 35.0%
! TACAAATTAGCCTATGGACT+GGG + chr5_3:68894389-68894408 None:intergenic 35.0%
! TTACAAATTAGCCTATGGAC+TGG + chr5_3:68894390-68894409 None:intergenic 35.0%
CCCCAATTTGACAAGAATAA+AGG - chr5_3:68894506-68894525 Msa0827550:intron 35.0%
CCCCTTTATTCTTGTCAAAT+TGG + chr5_3:68894511-68894530 None:intergenic 35.0%
! ATATAGTTTGTGCTAGTCTC+AGG - chr5_3:68894531-68894550 Msa0827550:intron 35.0%
! TATAGTTTGTGCTAGTCTCA+GGG - chr5_3:68894532-68894551 Msa0827550:intron 35.0%
!!! AGGCCTCCTTAATTTTGATT+TGG + chr5_3:68894576-68894595 None:intergenic 35.0%
CTGACAATGAGACAATAACT+TGG - chr5_3:68894711-68894730 Msa0827550:intron 35.0%
AACTTGGATGCACAATAAAC+AGG - chr5_3:68894727-68894746 Msa0827550:intron 35.0%
ATGCACAATAAACAGGTTAC+TGG - chr5_3:68894734-68894753 Msa0827550:intron 35.0%
TGCACAATAAACAGGTTACT+GGG - chr5_3:68894735-68894754 Msa0827550:intron 35.0%
!! AAGAGAACACAAGTTTTGTG+AGG - chr5_3:68894767-68894786 Msa0827550:intron 35.0%
TAAGGCTAGGGTTTCAAAAA+AGG - chr5_3:68894845-68894864 Msa0827550:intron 35.0%
!!! GCACTTTTGGTTTAAAGTGT+GGG + chr5_3:68895232-68895251 None:intergenic 35.0%
!!! AGCACTTTTGGTTTAAAGTG+TGG + chr5_3:68895233-68895252 None:intergenic 35.0%
! AATGTCTGTTCATTCTAGGA+AGG - chr5_3:68895295-68895314 Msa0827550:intron 35.0%
! ATGTCTGTTCATTCTAGGAA+GGG - chr5_3:68895296-68895315 Msa0827550:intron 35.0%
ATATTTGTGCATTCTGCGTT+GGG + chr5_3:68895533-68895552 None:intergenic 35.0%
AATATTTGTGCATTCTGCGT+TGG + chr5_3:68895534-68895553 None:intergenic 35.0%
CTCATATCACACCTATTGTA+GGG + chr5_3:68895602-68895621 None:intergenic 35.0%
! ACTGGAGTATCTTATAAGGT+GGG + chr5_3:68895657-68895676 None:intergenic 35.0%
! AACTGGAGTATCTTATAAGG+TGG + chr5_3:68895658-68895677 None:intergenic 35.0%
CTAACTCAATCCTACATAAC+TGG + chr5_3:68895675-68895694 None:intergenic 35.0%
!! GCCAAAAAAGTGCTTATATG+AGG - chr5_3:68895820-68895839 Msa0827550:intron 35.0%
! TTTTGTTAGGAATACACCGT+AGG + chr5_3:68895936-68895955 None:intergenic 35.0%
TTGGGAGAAATGATGTGTTT+AGG - chr5_3:68896088-68896107 Msa0827550:intron 35.0%
GTTATGAGTGCATTAAGTAG+AGG - chr5_3:68896115-68896134 Msa0827550:intron 35.0%
TAACATAACACAGGTGAAGA+TGG - chr5_3:68896409-68896428 Msa0827550:intron 35.0%
ATGCAAAATCTGAACCAACT+AGG + chr5_3:68896449-68896468 None:intergenic 35.0%
!! TAGTTGGTTCAGATTTTGCA+TGG - chr5_3:68896448-68896467 Msa0827550:intron 35.0%
! CAGATTTTGCATGGTGATAA+AGG - chr5_3:68896457-68896476 Msa0827550:intron 35.0%
TCTATTGCACATCTTTCCAA+TGG + chr5_3:68896485-68896504 None:intergenic 35.0%
! GCACTTCTATTGTCTTTTCA+GGG + chr5_3:68896712-68896731 None:intergenic 35.0%
! TGCACTTCTATTGTCTTTTC+AGG + chr5_3:68896713-68896732 None:intergenic 35.0%
AGTCAAAGAATTACAGGGTT+TGG - chr5_3:68896935-68896954 Msa0827550:intron 35.0%
!! GAGAACTGTATTTTTGATGG+AGG + chr5_3:68897013-68897032 None:intergenic 35.0%
! GACATACAATTGACTTATGC+AGG - chr5_3:68897060-68897079 Msa0827550:intron 35.0%
! TATGCAGGAGCAACTTTTTA+TGG - chr5_3:68897075-68897094 Msa0827550:intron 35.0%
! GATACAGTTCGACATTTTCT+TGG + chr5_3:68897215-68897234 None:intergenic 35.0%
AAATGTCGAACTGTATCGTA+AGG - chr5_3:68897218-68897237 Msa0827550:intron 35.0%
TTGGAGTTCAGAATATAGCA+AGG + chr5_3:68897355-68897374 None:intergenic 35.0%
! TTTTCACTAACTCAGGTCTA+TGG - chr5_3:68897381-68897400 Msa0827550:intron 35.0%
!!! AGAGTTTTGAGTCTCACAAA+TGG - chr5_3:68897429-68897448 Msa0827550:intron 35.0%
!!! TAGTTTTGTAGTTCCTGAAG+GGG + chr5_3:68897529-68897548 None:intergenic 35.0%
!! GAGTACAGCCTCTGAAATTA+AGG - chr5_3:68888147-68888166 Msa0827550:CDS 40.0%
ATGTGGGTCCCGTATAAATT+TGG - chr5_3:68888353-68888372 Msa0827550:intron 40.0%
GAGACCCACCAAATTTATAC+GGG + chr5_3:68888364-68888383 None:intergenic 40.0%
AGCTTTCAATTGGTCCAAGT+TGG + chr5_3:68888498-68888517 None:intergenic 40.0%
CAGAATGTCTTGGAACTACA+TGG - chr5_3:68888897-68888916 Msa0827550:intron 40.0%
ACATGGCACTCACTGTTTAA+TGG - chr5_3:68888914-68888933 Msa0827550:intron 40.0%
AACTTACCACCAACATCAAC+AGG + chr5_3:68889250-68889269 None:intergenic 40.0%
!! TGTTGATGTTGGTGGTAAGT+TGG - chr5_3:68889249-68889268 Msa0827550:intron 40.0%
! TGCCAGCATGTTTTCCTATA+AGG - chr5_3:68889341-68889360 Msa0827550:intron 40.0%
! GCCAGCATGTTTTCCTATAA+GGG - chr5_3:68889342-68889361 Msa0827550:intron 40.0%
! CCAGCATGTTTTCCTATAAG+GGG - chr5_3:68889343-68889362 Msa0827550:intron 40.0%
! CAGCATGTTTTCCTATAAGG+GGG - chr5_3:68889344-68889363 Msa0827550:intron 40.0%
!! TTTTCCTATAAGGGGGTGTA+TGG - chr5_3:68889351-68889370 Msa0827550:intron 40.0%
ATACACTGGTCCAAGCTAAA+GGG - chr5_3:68889439-68889458 Msa0827550:intron 40.0%
! TTTACAGCCAGTGGTTGATA+CGG - chr5_3:68890143-68890162 Msa0827550:intron 40.0%
AGTTCTGTTCAAGATTGGAG+GGG + chr5_3:68890188-68890207 None:intergenic 40.0%
GAGTTCTGTTCAAGATTGGA+GGG + chr5_3:68890189-68890208 None:intergenic 40.0%
! GCAACCAAAGGCATATTCTT+AGG - chr5_3:68890210-68890229 Msa0827550:intron 40.0%
GAACTACAAAGAAGAGTGGA+TGG - chr5_3:68890251-68890270 Msa0827550:intron 40.0%
!! AAGACGACTTTGAGTTTTCG+AGG + chr5_3:68890413-68890432 None:intergenic 40.0%
ACAATCTGCAAGAAAGTCAC+CGG - chr5_3:68890616-68890635 Msa0827550:intron 40.0%
!!! AACACATGCGAAGTTTTGAG+GGG + chr5_3:68890735-68890754 None:intergenic 40.0%
! CAAACACATGCGAAGTTTTG+AGG + chr5_3:68890737-68890756 None:intergenic 40.0%
! ATTCCGGTTGGTACATACAT+TGG - chr5_3:68890822-68890841 Msa0827550:intron 40.0%
TGACCAATGTATGTACCAAC+CGG + chr5_3:68890828-68890847 None:intergenic 40.0%
! GCTCAAAATTTTGCCTCTTG+AGG - chr5_3:68891496-68891515 Msa0827550:intron 40.0%
CCAAATTAGGGATGTTAACG+GGG + chr5_3:68891656-68891675 None:intergenic 40.0%
!!! TCTGGTTGGGTATTTTGGTT+TGG - chr5_3:68891855-68891874 Msa0827550:intron 40.0%
!!! GGGTATTTTGGTTTGGTATC+TGG - chr5_3:68891862-68891881 Msa0827550:intron 40.0%
ATGATCCGGTCTAGATCATT+TGG - chr5_3:68891928-68891947 Msa0827550:intron 40.0%
TGTTTAACGCATGTTTGAGG+TGG - chr5_3:68892295-68892314 Msa0827550:intron 40.0%
TGTTTAGAGAGGGAGAAGTA+AGG - chr5_3:68892609-68892628 Msa0827550:intron 40.0%
ACCTCAATATGAGCTGAAAG+TGG + chr5_3:68892809-68892828 None:intergenic 40.0%
ACTTTCAGCTCATATTGAGG+TGG - chr5_3:68892808-68892827 Msa0827550:intron 40.0%
GTCATACATAGATGAGAGCA+AGG - chr5_3:68893304-68893323 Msa0827550:intron 40.0%
ATCAAGAGTTAGGAGAGGAA+TGG + chr5_3:68893411-68893430 None:intergenic 40.0%
GAAAGAGATGGAGAGGAAAA+TGG - chr5_3:68893517-68893536 Msa0827550:intron 40.0%
! TTCTTAAATGTGGAGGCACA+TGG + chr5_3:68893578-68893597 None:intergenic 40.0%
GTTCCTGTTCTTAAATGTGG+AGG + chr5_3:68893585-68893604 None:intergenic 40.0%
CTGGTTCCTGTTCTTAAATG+TGG + chr5_3:68893588-68893607 None:intergenic 40.0%
AGTGTGACATAGTAGTGAAC+TGG + chr5_3:68893607-68893626 None:intergenic 40.0%
AGTCTCGTTTGGACTTGAAA+GGG - chr5_3:68893756-68893775 Msa0827550:intron 40.0%
! TTGGACTTGAAAGGGAGTAT+TGG - chr5_3:68893764-68893783 Msa0827550:intron 40.0%
TTTCCATCGGTCCTATTCTA+GGG + chr5_3:68894064-68894083 None:intergenic 40.0%
ACTAACCCACTCCATTATTG+TGG - chr5_3:68894157-68894176 Msa0827550:intron 40.0%
! GCAAACCACAATAATGGAGT+GGG + chr5_3:68894165-68894184 None:intergenic 40.0%
! AGCAAACCACAATAATGGAG+TGG + chr5_3:68894166-68894185 None:intergenic 40.0%
ATTTATCCAACCCAGTCCAT+AGG - chr5_3:68894376-68894395 Msa0827550:intron 40.0%
!! CTTTGAGGCATGTGATTATG+AGG + chr5_3:68894596-68894615 None:intergenic 40.0%
CTCATAATCACATGCCTCAA+AGG - chr5_3:68894594-68894613 Msa0827550:intron 40.0%
TGAGAAGAATGATGCCTTTG+AGG + chr5_3:68894611-68894630 None:intergenic 40.0%
AGTTATCTCTAGTTGTCCCA+AGG + chr5_3:68894690-68894709 None:intergenic 40.0%
AACAGGTTACTGGGATTTAG+TGG - chr5_3:68894744-68894763 Msa0827550:intron 40.0%
TCCATAAAGTGGTTAAGGCT+AGG - chr5_3:68894832-68894851 Msa0827550:intron 40.0%
CCATAAAGTGGTTAAGGCTA+GGG - chr5_3:68894833-68894852 Msa0827550:intron 40.0%
TTATGTTGCTGCTGTTGTGA+TGG + chr5_3:68894871-68894890 None:intergenic 40.0%
! ATCTTGGGTTTAAAGTGTGG+AGG - chr5_3:68895270-68895289 Msa0827550:intron 40.0%
GGACAATGTCTGTTCATTCT+AGG - chr5_3:68895291-68895310 Msa0827550:intron 40.0%
! TTCATTCTAGGAAGGGAAGA+AGG - chr5_3:68895303-68895322 Msa0827550:intron 40.0%
TATGTTGAGAGCCCTACAAT+AGG - chr5_3:68895588-68895607 Msa0827550:intron 40.0%
GCTCATATCACACCTATTGT+AGG + chr5_3:68895603-68895622 None:intergenic 40.0%
! CTGGAGTATCTTATAAGGTG+GGG + chr5_3:68895656-68895675 None:intergenic 40.0%
!! ACGCTCTAGAAATCCAATGT+TGG - chr5_3:68895753-68895772 Msa0827550:intron 40.0%
!! CGCTCTAGAAATCCAATGTT+GGG - chr5_3:68895754-68895773 Msa0827550:intron 40.0%
AAATCCAATGTTGGGCATGA+AGG - chr5_3:68895762-68895781 Msa0827550:intron 40.0%
AATCCAATGTTGGGCATGAA+GGG - chr5_3:68895763-68895782 Msa0827550:intron 40.0%
GTCCTACGTTGGATGAAATA+TGG - chr5_3:68895798-68895817 Msa0827550:intron 40.0%
AACAGAGACAAAGTGTGCTT+TGG - chr5_3:68896069-68896088 Msa0827550:intron 40.0%
ACAGAGACAAAGTGTGCTTT+GGG - chr5_3:68896070-68896089 Msa0827550:intron 40.0%
TTAGAATGATGCGACCTAGT+TGG - chr5_3:68896432-68896451 Msa0827550:intron 40.0%
GGCTACACTGTATTACTGTA+TGG + chr5_3:68896517-68896536 None:intergenic 40.0%
TCAGAGTGAGACAATCATTG+AGG - chr5_3:68896571-68896590 Msa0827550:intron 40.0%
!! GTCTTTTCAGGGTTGTTACT+CGG + chr5_3:68896701-68896720 None:intergenic 40.0%
! TTTTCATACGAACACCACGA+AGG + chr5_3:68896980-68896999 None:intergenic 40.0%
TCGTGGTGTTCGTATGAAAA+AGG - chr5_3:68896980-68896999 Msa0827550:intron 40.0%
TTGAGTCTCACAAATGGTGT+AGG - chr5_3:68897435-68897454 Msa0827550:intron 40.0%
ATGAGTCCCACCAAATCATG+TGG - chr5_3:68888336-68888355 Msa0827550:intron 45.0%
TGAGTCCCACCAAATCATGT+GGG - chr5_3:68888337-68888356 Msa0827550:intron 45.0%
TATACGGGACCCACATGATT+TGG + chr5_3:68888349-68888368 None:intergenic 45.0%
TGGGTCCCGTATAAATTTGG+TGG - chr5_3:68888356-68888375 Msa0827550:intron 45.0%
GGGTCCCGTATAAATTTGGT+GGG - chr5_3:68888357-68888376 Msa0827550:intron 45.0%
AGTTGGAGACCAACTTTCAC+TGG + chr5_3:68888481-68888500 None:intergenic 45.0%
! GTGAAAGTTGGTCTCCAACT+TGG - chr5_3:68888481-68888500 Msa0827550:intron 45.0%
! ATCACAAAGGGTACGAGTGT+GGG + chr5_3:68888778-68888797 None:intergenic 45.0%
! TATCACAAAGGGTACGAGTG+TGG + chr5_3:68888779-68888798 None:intergenic 45.0%
GCTCCCACTGTATAACAGAT+GGG + chr5_3:68888803-68888822 None:intergenic 45.0%
TGCTCCCACTGTATAACAGA+TGG + chr5_3:68888804-68888823 None:intergenic 45.0%
!! TTGGTGACGGTGAGATTAGA+AGG - chr5_3:68888869-68888888 Msa0827550:intron 45.0%
GGAACAGAACCTGTTGATGT+TGG - chr5_3:68889238-68889257 Msa0827550:intron 45.0%
ACAGAACCTGTTGATGTTGG+TGG - chr5_3:68889241-68889260 Msa0827550:intron 45.0%
CCCCTTATAGGAAAACATGC+TGG + chr5_3:68889346-68889365 None:intergenic 45.0%
CATACCATACACCCCCTTAT+AGG + chr5_3:68889358-68889377 None:intergenic 45.0%
GGTGTATGGTATGAGACAAC+CGG - chr5_3:68889365-68889384 Msa0827550:intron 45.0%
!!! GTGTATGTTTTGGTCCAGCT+TGG + chr5_3:68889425-68889444 None:intergenic 45.0%
AGCTGGACCAAAACATACAC+TGG - chr5_3:68889425-68889444 Msa0827550:intron 45.0%
! GCTTGGACCAGTGTATGTTT+TGG + chr5_3:68889435-68889454 None:intergenic 45.0%
CATACACTGGTCCAAGCTAA+AGG - chr5_3:68889438-68889457 Msa0827550:intron 45.0%
CTGAAGTGAGAACAAAGGAG+TGG - chr5_3:68889781-68889800 Msa0827550:intron 45.0%
TAGGATACAACAAAAGCCGC+AGG - chr5_3:68890015-68890034 Msa0827550:intron 45.0%
ATTACGACCGTATCAACCAC+TGG + chr5_3:68890153-68890172 None:intergenic 45.0%
GTTCTGTTCAAGATTGGAGG+GGG + chr5_3:68890187-68890206 None:intergenic 45.0%
GGAGTTCTGTTCAAGATTGG+AGG + chr5_3:68890190-68890209 None:intergenic 45.0%
TGCGGAGTTCTGTTCAAGAT+TGG + chr5_3:68890193-68890212 None:intergenic 45.0%
ACTCTTCAGGGTTGTTTGGT+TGG + chr5_3:68890436-68890455 None:intergenic 45.0%
CACAACTCTTCAGGGTTGTT+TGG + chr5_3:68890440-68890459 None:intergenic 45.0%
!! TTTCCAGTTTTGGCAAAGGG+AGG - chr5_3:68890569-68890588 Msa0827550:intron 45.0%
AGACTAGAGCATATTCCGGT+TGG - chr5_3:68890810-68890829 Msa0827550:intron 45.0%
GCTGCATTTAACACTTTCCC+AGG - chr5_3:68890892-68890911 Msa0827550:intron 45.0%
!! CAACAGAAAGCACCCTACTT+CGG - chr5_3:68891087-68891106 Msa0827550:intron 45.0%
GCTAGTGGGAACATATGCTA+AGG - chr5_3:68891291-68891310 Msa0827550:intron 45.0%
GGTTAAAAACTCTCCGAGGT+GGG - chr5_3:68891594-68891613 Msa0827550:intron 45.0%
GTTAAAAACTCTCCGAGGTG+GGG - chr5_3:68891595-68891614 Msa0827550:intron 45.0%
ATTAGGGATGTTAACGGGGT+GGG + chr5_3:68891652-68891671 None:intergenic 45.0%
AATTAGGGATGTTAACGGGG+TGG + chr5_3:68891653-68891672 None:intergenic 45.0%
CCCCGTTAACATCCCTAATT+TGG - chr5_3:68891653-68891672 Msa0827550:intron 45.0%
! TGGTTTGGCAAAGCATGTCA+TGG - chr5_3:68891896-68891915 Msa0827550:intron 45.0%
! GCCACTTTCAGCTCATATTG+AGG - chr5_3:68892805-68892824 Msa0827550:intron 45.0%
GCTGAACTTGACTCTTGCTT+AGG - chr5_3:68893152-68893171 Msa0827550:intron 45.0%
GAGAGATCAAGAGTTAGGAG+AGG + chr5_3:68893416-68893435 None:intergenic 45.0%
TAGCTAGGAAAGAGATGGAG+AGG - chr5_3:68893510-68893529 Msa0827550:intron 45.0%
GTGCCTCCACATTTAAGAAC+AGG - chr5_3:68893579-68893598 Msa0827550:intron 45.0%
TGCAAGTGCAACTATCCAAC+TGG - chr5_3:68893640-68893659 Msa0827550:intron 45.0%
TGTTTGTTCTCAATGGGGCT+GGG + chr5_3:68893721-68893740 None:intergenic 45.0%
TTGTTTGTTCTCAATGGGGC+TGG + chr5_3:68893722-68893741 None:intergenic 45.0%
GAGAAGAGAAGAGTCTCGTT+TGG - chr5_3:68893745-68893764 Msa0827550:intron 45.0%
GAGTCTCGTTTGGACTTGAA+AGG - chr5_3:68893755-68893774 Msa0827550:intron 45.0%
GCCGCTTATAGAAGTCTACT+AGG - chr5_3:68894030-68894049 Msa0827550:intron 45.0%
AGGAAGAATGCCCCTAGAAT+AGG - chr5_3:68894050-68894069 Msa0827550:intron 45.0%
TTCCATCGGTCCTATTCTAG+GGG + chr5_3:68894063-68894082 None:intergenic 45.0%
GTTTCCATCGGTCCTATTCT+AGG + chr5_3:68894065-68894084 None:intergenic 45.0%
GAATAGGACCGATGGAAACA+TGG - chr5_3:68894066-68894085 Msa0827550:intron 45.0%
!! AATTAGCCTATGGACTGGGT+TGG + chr5_3:68894385-68894404 None:intergenic 45.0%
!! CCCTAGCCTTAACCACTTTA+TGG + chr5_3:68894836-68894855 None:intergenic 45.0%
!! CACAGGGTTTAGAGCACTTT+TGG + chr5_3:68895245-68895264 None:intergenic 45.0%
! AAAGTGCTCTAAACCCTGTG+AGG - chr5_3:68895245-68895264 Msa0827550:intron 45.0%
! AAGTGCTCTAAACCCTGTGA+GGG - chr5_3:68895246-68895265 Msa0827550:intron 45.0%
! GGCATCTTGGGTTTAAAGTG+TGG - chr5_3:68895267-68895286 Msa0827550:intron 45.0%
GTGTGATAAGAGTCCTACGT+TGG - chr5_3:68895787-68895806 Msa0827550:intron 45.0%
GGCCATATTTCATCCAACGT+AGG + chr5_3:68895803-68895822 None:intergenic 45.0%
!! CATGGTGATAAAGGCACCAT+TGG - chr5_3:68896466-68896485 Msa0827550:intron 45.0%
ACAGGGTTTGGAGAACCAAT+TGG - chr5_3:68896947-68896966 Msa0827550:intron 45.0%
! CACGAAGGCTGATTTCCAAT+TGG + chr5_3:68896965-68896984 None:intergenic 45.0%
CAATTGGAAATCAGCCTTCG+TGG - chr5_3:68896963-68896982 Msa0827550:intron 45.0%
TCGAAAGGTCAGTCCTCAAA+TGG - chr5_3:68897117-68897136 Msa0827550:intron 45.0%
CTCACAAATGGTGTAGGCAT+AGG - chr5_3:68897441-68897460 Msa0827550:intron 45.0%
!! ATTAATTATTATTAAATCTA+TGG + chr5_3:68888523-68888542 None:intergenic 5.0%
!! AGATTTAATAATAATTAATA+TGG - chr5_3:68888524-68888543 Msa0827550:CDS 5.0%
!!! AAATTATTTTTCATTTAATT+AGG - chr5_3:68889118-68889137 Msa0827550:intron 5.0%
!! TAGAAAAAAAAAAAAAAAAA+AGG - chr5_3:68892253-68892272 Msa0827550:intron 5.0%
!! TCAAATATAAAAAATATTAT+CGG + chr5_3:68894271-68894290 None:intergenic 5.0%
!! AGAAATAAAATATAATATAT+TGG - chr5_3:68895341-68895360 Msa0827550:intron 5.0%
TAGTGTAAGTGTGACCGCAC+AGG - chr5_3:68888598-68888617 Msa0827550:intron 50.0%
AAGAGAGGGTCCCTTTAGCT+TGG + chr5_3:68889452-68889471 None:intergenic 50.0%
AGTGAGAACAAAGGAGTGGC+TGG - chr5_3:68889785-68889804 Msa0827550:intron 50.0%
CAGTAGGACTTTACAGCCAG+TGG - chr5_3:68890134-68890153 Msa0827550:intron 50.0%
GAACAGAACTCCGCAACCAA+AGG - chr5_3:68890198-68890217 Msa0827550:intron 50.0%
AAAGGGAGGCAGCAGTGTTA+AGG - chr5_3:68890583-68890602 Msa0827550:intron 50.0%
CGTAGTCAGCTGCACATAGA+TGG - chr5_3:68891001-68891020 Msa0827550:intron 50.0%
CAATGAACTACTCGGGGACA+GGG + chr5_3:68891524-68891543 None:intergenic 50.0%
TCAATGAACTACTCGGGGAC+AGG + chr5_3:68891525-68891544 None:intergenic 50.0%
!! TTAGTGTTGATGGATCCCCG+CGG - chr5_3:68891570-68891589 Msa0827550:intron 50.0%
GGGTTAAAAACTCTCCGAGG+TGG - chr5_3:68891593-68891612 Msa0827550:intron 50.0%
TTAGGGATGTTAACGGGGTG+GGG + chr5_3:68891651-68891670 None:intergenic 50.0%
CACAACAGCAAGGCCTCATT+TGG - chr5_3:68891978-68891997 Msa0827550:intron 50.0%
TCGCTTGGAGATACTGCTAG+TGG + chr5_3:68892475-68892494 None:intergenic 50.0%
TCAAATCCGGCTAGAACGTG+TGG - chr5_3:68893551-68893570 Msa0827550:intron 50.0%
! AGGCTTTGGTTGTACTAGCG+AGG + chr5_3:68895128-68895147 None:intergenic 50.0%
ACAACCAAAGCCTCTACGAG+TGG - chr5_3:68895135-68895154 Msa0827550:intron 50.0%
TTGACCACTCGTAGAGGCTT+TGG + chr5_3:68895142-68895161 None:intergenic 50.0%
GAAGTCTTGACCACTCGTAG+AGG + chr5_3:68895148-68895167 None:intergenic 50.0%
!! TAAACCCTGTGAGGGCATCT+TGG - chr5_3:68895254-68895273 Msa0827550:intron 50.0%
!! AAACCCTGTGAGGGCATCTT+GGG - chr5_3:68895255-68895274 Msa0827550:intron 50.0%
AAACCCAAGATGCCCTCACA+GGG + chr5_3:68895261-68895280 None:intergenic 50.0%
TAAACCCAAGATGCCCTCAC+AGG + chr5_3:68895262-68895281 None:intergenic 50.0%
! CCTATTCTAATCGGGGCACT+CGG - chr5_3:68895727-68895746 Msa0827550:intron 50.0%
! CTATTCTAATCGGGGCACTC+GGG - chr5_3:68895728-68895747 Msa0827550:intron 50.0%
ACACCCTTCATGCCCAACAT+TGG + chr5_3:68895769-68895788 None:intergenic 50.0%
TCTGGCTACCATGCATCCTA+CGG - chr5_3:68895917-68895936 Msa0827550:intron 50.0%
GGAATACACCGTAGGATGCA+TGG + chr5_3:68895928-68895947 None:intergenic 50.0%
TTCAGGGTTGTTACTCGGAG+AGG + chr5_3:68896696-68896715 None:intergenic 50.0%
!! CGGGACCCACATGATTTGGT+GGG + chr5_3:68888345-68888364 None:intergenic 55.0%
! ACGGGACCCACATGATTTGG+TGG + chr5_3:68888346-68888365 None:intergenic 55.0%
CTGCCTCCCTTTGCCAAAAC+TGG + chr5_3:68890575-68890594 None:intergenic 55.0%
!! TAGTGTTGATGGATCCCCGC+GGG - chr5_3:68891571-68891590 Msa0827550:intron 55.0%
! GAGAGTTTTTAACCCCCGCG+GGG + chr5_3:68891588-68891607 None:intergenic 55.0%
! GGAGAGTTTTTAACCCCCGC+GGG + chr5_3:68891589-68891608 None:intergenic 55.0%
! CGGAGAGTTTTTAACCCCCG+CGG + chr5_3:68891590-68891609 None:intergenic 55.0%
CGGGGGTTAAAAACTCTCCG+AGG - chr5_3:68891590-68891609 Msa0827550:intron 55.0%
GGGAATGAGGATGGGGATAG+CGG - chr5_3:68891615-68891634 Msa0827550:intron 55.0%
!! AGGATGGGGATAGCGGAGAT+GGG - chr5_3:68891622-68891641 Msa0827550:intron 55.0%
CATGGTCCACACGTTCTAGC+CGG + chr5_3:68893560-68893579 None:intergenic 55.0%
TGCCCCTAGAATAGGACCGA+TGG - chr5_3:68894058-68894077 Msa0827550:intron 55.0%
CCGAGTGCCCCGATTAGAAT+AGG + chr5_3:68895730-68895749 None:intergenic 55.0%
TGGCTGAGCTGGAGATTCAC+AGG + chr5_3:68897483-68897502 None:intergenic 55.0%
! TGTAGTGCTGTTGCTGTGGC+TGG + chr5_3:68897503-68897522 None:intergenic 55.0%
GCCACAGCAACAGCACTACA+AGG - chr5_3:68897503-68897522 Msa0827550:CDS 55.0%
! GCCTTGTAGTGCTGTTGCTG+TGG + chr5_3:68897507-68897526 None:intergenic 55.0%
AGGGTACGAGTGTGGGTCTC+CGG + chr5_3:68888771-68888790 None:intergenic 60.0%
!! AGTGTTGATGGATCCCCGCG+GGG - chr5_3:68891572-68891591 Msa0827550:intron 60.0%
ACTCTCCGAGGTGGGGAATG+AGG - chr5_3:68891602-68891621 Msa0827550:intron 60.0%
TCCGAGGTGGGGAATGAGGA+TGG - chr5_3:68891606-68891625 Msa0827550:intron 60.0%
CCCATCCTCATTCCCCACCT+CGG + chr5_3:68891610-68891629 None:intergenic 60.0%
CCGAGGTGGGGAATGAGGAT+GGG - chr5_3:68891607-68891626 Msa0827550:intron 60.0%
CGAGGTGGGGAATGAGGATG+GGG - chr5_3:68891608-68891627 Msa0827550:intron 60.0%
!! GAGGATGGGGATAGCGGAGA+TGG - chr5_3:68891621-68891640 Msa0827550:intron 60.0%
CAGCACTACAAGGCCCCTTC+AGG - chr5_3:68897513-68897532 Msa0827550:CDS 60.0%
! GTGTTGATGGATCCCCGCGG+GGG - chr5_3:68891573-68891592 Msa0827550:intron 65.0%
! GTTGCTGTGGCTGGCTGAGC+TGG + chr5_3:68897494-68897513 None:intergenic 65.0%
CGGGGACAGGGTCCCTCAAG+AGG + chr5_3:68891512-68891531 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 68888090 68897548 68888090 ID=Msa0827550;Name=Msa0827550
chr5_3 mRNA 68888090 68897548 68888090 ID=Msa0827550-mRNA-1;Parent=Msa0827550;Name=Msa0827550-mRNA-1;_AED=0.15;_eAED=0.16;_QI=1|0|0|1|0.6|0.5|6|0|159
chr5_3 exon 68897470 68897548 68897470 ID=Msa0827550-mRNA-1:exon:21676;Parent=Msa0827550-mRNA-1
chr5_3 exon 68895001 68895062 68895001 ID=Msa0827550-mRNA-1:exon:21675;Parent=Msa0827550-mRNA-1
chr5_3 exon 68888637 68888736 68888637 ID=Msa0827550-mRNA-1:exon:21674;Parent=Msa0827550-mRNA-1
chr5_3 exon 68888515 68888556 68888515 ID=Msa0827550-mRNA-1:exon:21673;Parent=Msa0827550-mRNA-1
chr5_3 exon 68888399 68888440 68888399 ID=Msa0827550-mRNA-1:exon:21672;Parent=Msa0827550-mRNA-1
chr5_3 exon 68888090 68888242 68888090 ID=Msa0827550-mRNA-1:exon:21671;Parent=Msa0827550-mRNA-1
chr5_3 five_prime_UTR 68897548 68897548 68897548 ID=Msa0827550-mRNA-1:five_prime_utr;Parent=Msa0827550-mRNA-1
chr5_3 CDS 68897470 68897547 68897470 ID=Msa0827550-mRNA-1:cds;Parent=Msa0827550-mRNA-1
chr5_3 CDS 68895001 68895062 68895001 ID=Msa0827550-mRNA-1:cds;Parent=Msa0827550-mRNA-1
chr5_3 CDS 68888637 68888736 68888637 ID=Msa0827550-mRNA-1:cds;Parent=Msa0827550-mRNA-1
chr5_3 CDS 68888515 68888556 68888515 ID=Msa0827550-mRNA-1:cds;Parent=Msa0827550-mRNA-1
chr5_3 CDS 68888399 68888440 68888399 ID=Msa0827550-mRNA-1:cds;Parent=Msa0827550-mRNA-1
chr5_3 CDS 68888090 68888242 68888090 ID=Msa0827550-mRNA-1:cds;Parent=Msa0827550-mRNA-1
Gene Sequence

>Msa0827550

ATGAGATCAGTAATTGATAGATATAACAAATCAAAAGAAGAACATAATCAACTTGGGAGTACAGCCTCTGAAATTAAGTTTTGGCAAAGGGAGGCAGCAGTGTTAAGGCAACAATTGCACAATCTGCAAGAAAGTCACCGGCAAATAATGGGTGAAGAATTATCAGGTTTGACAGTCAAAGAATTACAGGGTTTGGAGAACCAATTGGAAATCAGCCTTCGTGGTGTTCGTATGAAAAAGGAGCAACTTTTTATGGATGAAATACAAGAACTAAATCGAAAGGGGGACATCATTCACCAAGAAAATGTCGAACTGTATCGTAAGGTCTATGGAACAAAAGATAAGAATGGAACAAACAGAGTTTTGAGTCTCACAAATGGTGTAGGCATAGGAGACGATTCAAATGTACCTGTGAATCTCCAGCTCAGCCAGCCACAGCAACAGCACTACAAGGCCCCTTCAGGAACTACAAAACTA

Protein sequence

>Msa0827550

MRSVIDRYNKSKEEHNQLGSTASEIKFWQREAAVLRQQLHNLQESHRQIMGEELSGLTVKELQGLENQLEISLRGVRMKKEQLFMDEIQELNRKGDIIHQENVELYRKVYGTKDKNGTNRVLSLTNGVGIGDDSNVPVNLQLSQPQQQHYKAPSGTTKL