AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0830940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0830940 MtrunA17_Chr5g0396691 90.719 668 17 2 1 629 1 662 0.0 1232
Msa0830940 MtrunA17_Chr5g0396711 90.419 668 19 2 1 629 1 662 0.0 1223
Msa0830940 MtrunA17_Chr8g0388081 70.930 602 130 2 62 624 1 596 0.0 911
Msa0830940 MtrunA17_Chr4g0034181 54.033 657 257 2 6 624 5 654 0.0 743
Msa0830940 MtrunA17_Chr1g0162621 52.108 664 271 3 6 629 5 661 0.0 721
Msa0830940 MtrunA17_Chr7g0270221 52.700 611 283 1 4 614 2 606 0.0 658
Msa0830940 MtrunA17_Chr1g0194371 47.976 667 299 4 4 628 2 662 0.0 634
Msa0830940 MtrunA17_Chr1g0205711 38.986 631 327 10 38 626 75 689 4.09e-138 419
Msa0830940 MtrunA17_Chr3g0120731 31.659 657 362 14 39 621 83 726 6.26e-89 291
Msa0830940 MtrunA17_Chr1g0160041 31.481 648 371 16 42 623 56 696 1.61e-86 284
Msa0830940 MtrunA17_Chr3g0124631 30.171 643 373 15 48 621 61 696 6.50e-84 277
Msa0830940 MtrunA17_Chr3g0121931 25.641 663 382 20 48 622 81 720 5.01e-43 165
Msa0830940 MtrunA17_Chr3g0121951 24.924 662 385 22 48 622 79 715 1.47e-40 157
Msa0830940 MtrunA17_Chr8g0377991 25.792 663 383 21 48 622 83 724 2.04e-40 157
Msa0830940 MtrunA17_Chr5g0395431 28.661 478 245 18 77 516 95 514 2.12e-26 114
Msa0830940 MtrunA17_Chr1g0180541 26.525 377 204 17 154 516 158 475 5.02e-23 103
Msa0830940 MtrunA17_Chr5g0409791 26.700 397 219 12 140 511 141 490 5.19e-22 100
Msa0830940 MtrunA17_Chr4g0039791 28.165 387 216 13 140 511 144 483 5.27e-22 100
Msa0830940 MtrunA17_Chr4g0028411 27.273 341 180 12 187 516 186 469 5.40e-22 100
Msa0830940 MtrunA17_Chr5g0409771 24.277 519 305 18 27 518 27 484 1.75e-21 98.6
Msa0830940 MtrunA17_Chr1g0180551 25.408 429 242 16 180 598 254 614 2.02e-21 98.6
Msa0830940 MtrunA17_Chr2g0327341 28.614 339 168 15 187 511 183 461 7.95e-20 93.6
Msa0830940 MtrunA17_Chr3g0116251 26.632 383 225 15 139 516 152 483 2.04e-18 89.0
Msa0830940 MtrunA17_Chr3g0116271 27.202 386 222 15 139 516 151 485 2.80e-18 88.6
Msa0830940 MtrunA17_Chr8g0388091 46.316 95 48 3 1 93 1 94 1.41e-17 79.0
Msa0830940 MtrunA17_Chr8g0370731 25.059 423 206 16 190 568 137 492 2.36e-16 82.4
Msa0830940 MtrunA17_Chr3g0102411 26.567 335 191 12 188 516 183 468 2.93e-16 82.4
Msa0830940 MtrunA17_Chr1g0197391 26.946 334 188 13 183 511 206 488 3.51e-16 82.0
Msa0830940 MtrunA17_Chr6g0471921 25.879 313 169 10 185 489 159 416 3.69e-16 81.6
Msa0830940 MtrunA17_Chr4g0000461 28.107 338 186 14 187 516 180 468 1.11e-15 80.5
Msa0830940 MtrunA17_Chr1g0157401 23.333 330 197 10 188 511 203 482 3.34e-15 79.0
Msa0830940 MtrunA17_Chr4g0072561 23.719 527 296 24 27 516 18 475 7.75e-15 77.8
Msa0830940 MtrunA17_Chr8g0353341 24.773 331 193 11 187 511 205 485 6.15e-14 74.7
Msa0830940 MtrunA17_Chr5g0396331 25.138 362 192 14 181 522 170 472 9.26e-14 74.3
Msa0830940 MtrunA17_Chr3g0109731 24.611 386 200 15 167 531 165 480 2.09e-13 73.2
Msa0830940 MtrunA17_Chr1g0186071 31.325 166 109 5 353 516 321 483 5.30e-13 72.0
Msa0830940 MtrunA17_Chr5g0406681 25.000 352 188 13 183 518 206 497 8.61e-13 71.2
Msa0830940 MtrunA17_Chr8g0370701 25.434 346 170 13 190 511 226 507 4.21e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0830940 AT4G23850.1 70.091 662 153 2 3 625 4 659 0.0 975
Msa0830940 AT4G11030.1 68.816 667 163 2 2 629 3 663 0.0 961
Msa0830940 AT1G64400.1 67.372 662 170 3 1 622 1 656 0.0 925
Msa0830940 AT1G49430.1 50.904 664 279 4 7 629 8 665 0.0 701
Msa0830940 AT2G47240.1 45.593 658 313 2 4 622 2 653 0.0 608
Msa0830940 AT2G47240.2 45.593 658 313 2 4 622 2 653 0.0 608
Msa0830940 AT2G47240.3 45.593 658 313 2 4 622 2 653 0.0 608
Msa0830940 AT2G47240.4 46.000 600 279 2 62 622 1 594 0.0 556
Msa0830940 AT1G49430.2 47.505 501 217 3 7 467 8 502 1.50e-169 494
Msa0830940 AT5G27600.1 39.360 625 323 11 38 621 78 687 1.32e-140 426
Msa0830940 AT3G05970.1 39.614 621 329 10 38 622 78 688 8.45e-138 419
Msa0830940 AT2G04350.2 31.336 651 372 14 39 621 76 719 1.22e-93 304
Msa0830940 AT2G04350.1 31.336 651 372 14 39 621 76 719 1.22e-93 304
Msa0830940 AT1G77590.1 31.397 637 366 15 48 621 62 690 1.73e-87 287
Msa0830940 AT1G77590.2 37.004 454 257 10 189 621 99 544 4.03e-82 269
Msa0830940 AT3G23790.1 26.133 662 378 25 48 622 85 722 3.96e-41 159
Msa0830940 AT4G14070.1 26.244 663 363 25 48 621 101 726 4.01e-39 154
Msa0830940 AT4G19010.1 27.865 384 216 12 140 509 146 482 3.52e-22 101
Msa0830940 AT2G47245.1 50.000 76 38 0 22 97 53 128 9.79e-21 89.0
Msa0830940 AT3G21230.3 28.313 332 186 12 190 516 211 495 8.06e-19 90.9
Msa0830940 AT3G21230.1 28.313 332 186 12 190 516 211 495 8.92e-19 90.5
Msa0830940 AT3G21230.2 28.313 332 186 12 190 516 211 495 1.24e-18 89.7
Msa0830940 AT4G05160.1 27.410 332 181 13 187 511 188 466 1.33e-18 90.1
Msa0830940 AT1G20500.1 27.027 333 178 13 188 511 196 472 1.86e-17 86.3
Msa0830940 AT3G21240.1 27.907 344 177 14 190 518 196 483 2.49e-17 86.3
Msa0830940 AT3G21240.2 27.907 344 177 14 190 518 196 483 2.59e-17 85.9
Msa0830940 AT3G21240.3 27.907 344 177 14 190 518 196 483 2.59e-17 85.9
Msa0830940 AT1G65060.1 24.731 465 254 17 77 504 74 479 3.78e-16 82.4
Msa0830940 AT5G63380.1 27.072 362 205 14 156 511 172 480 4.21e-16 82.4
Msa0830940 AT1G65060.2 24.612 451 245 16 77 490 74 466 8.43e-16 80.9
Msa0830940 AT3G16910.1 25.118 422 206 17 196 590 204 542 1.90e-15 80.1
Msa0830940 AT1G66120.1 25.549 364 188 14 185 531 182 479 9.61e-15 77.8
Msa0830940 AT1G51680.1 28.125 352 176 14 190 523 203 495 9.98e-15 77.8
Msa0830940 AT1G51680.3 28.125 352 176 14 190 523 203 495 1.29e-14 77.4
Msa0830940 AT1G65890.1 24.798 371 184 11 185 532 182 480 1.56e-14 77.4
Msa0830940 AT1G20510.1 26.316 342 190 13 185 516 182 471 1.60e-14 77.0
Msa0830940 AT1G20510.2 25.731 342 192 12 185 516 182 471 2.23e-14 76.3
Msa0830940 AT1G51680.2 27.954 347 173 14 190 518 203 490 4.46e-14 75.5
Msa0830940 AT1G20510.3 26.349 315 171 12 185 489 182 445 1.61e-13 73.6
Msa0830940 AT1G62940.1 25.519 337 194 11 188 516 180 467 8.04e-13 71.6

Find 200 sgRNAs with CRISPR-Local

Find 724 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTCTCAGATATGGGTTTA+TGG 0.169098 5_4:+3999221 Msa0830940:intron
CTACCAAGCATAGGATTATT+TGG 0.199402 5_4:-3990775 None:intergenic
TAAATCCTACATGATATATT+TGG 0.201995 5_4:-3989470 None:intergenic
AGAGGAGAAATTTGTTTAAA+AGG 0.210304 5_4:+3998223 Msa0830940:CDS
TTTGCTCATTTATTTCCTTT+TGG 0.236484 5_4:+4000571 Msa0830940:three_prime_UTR
ATTCTCTCTCTGGAGATTCT+AGG 0.265471 5_4:+3999339 Msa0830940:CDS
TGACCCAGTTCCATTTGATA+TGG 0.272583 5_4:+3999893 Msa0830940:CDS
TTCCTGGTCTTGATAGTTGC+TGG 0.272872 5_4:+3990053 Msa0830940:CDS
GGGCCTAAGTAAAGTAAAAT+AGG 0.279631 5_4:-3989541 None:intergenic
TATTAGGTGAAGCAAGGTTT+AGG 0.289486 5_4:+3997564 Msa0830940:intron
ATGTTCAAGTACTGGTTTGC+TGG 0.298933 5_4:-3999282 None:intergenic
GTTCAATAGGCTTCTGGCGC+GGG 0.302933 5_4:+3996731 Msa0830940:CDS
GTTCCTTTATATGATACTTT+AGG 0.304785 5_4:+3994208 Msa0830940:CDS
TTGACACAGAAAATTTCTTC+TGG 0.306587 5_4:+3997143 Msa0830940:CDS
AGGGCATCGTAACCCATTTC+AGG 0.320553 5_4:-3998187 None:intergenic
CTCCTCTTGGTGTGCTTGCA+AGG 0.324542 5_4:-3998207 None:intergenic
CATAATCCACTCTGCAGAAT+TGG 0.331511 5_4:-3993152 None:intergenic
CCAAGCATATCTAGTTCATT+TGG 0.343611 5_4:-3998115 None:intergenic
ATATGGCATGGTGGTTCAAT+AGG 0.345107 5_4:+3996718 Msa0830940:CDS
TGAAAAGTCGATGGAGTGTC+TGG 0.347572 5_4:-3989782 None:intergenic
TAAAATATTATTCCATTCCT+TGG 0.357025 5_4:+4000731 Msa0830940:three_prime_UTR
ATAATCTTCATACTTCCATT+AGG 0.361330 5_4:-3998449 None:intergenic
ATTAGGTGAAGCAAGGTTTA+GGG 0.362139 5_4:+3997565 Msa0830940:intron
GAACATTGGGCAGAAGAAAA+TGG 0.369465 5_4:+3999299 Msa0830940:CDS
GCATGTGGAAAGTTACTTAC+GGG 0.372264 5_4:+3997632 Msa0830940:CDS
TTTAAACAAATTTCTCCTCT+TGG 0.377874 5_4:-3998220 None:intergenic
CCTGGAATCTGTTCCTGAAA+TGG 0.379308 5_4:+3998174 Msa0830940:CDS
ACAAAAGAGGTTCTGGTTGA+TGG 0.379543 5_4:+3998286 Msa0830940:CDS
GCTCATGTCCTACAAGGATA+TGG 0.379833 5_4:+3997666 Msa0830940:CDS
TCTATCCGCAGCTGTGGTTA+TGG 0.382635 5_4:+3991001 Msa0830940:CDS
AATATTATTACCCTCTTAGC+TGG 0.388607 5_4:+3996359 Msa0830940:CDS
CTCTCGCACATACCTTTGAT+AGG 0.389512 5_4:+3996677 Msa0830940:CDS
TTGGATATCAATACTCCCTT+GGG 0.390960 5_4:-3996332 None:intergenic
TATCTTTATGTTCTATGCAT+TGG 0.391815 5_4:-3989700 None:intergenic
AGTTGAATAATGTCTTCTTC+AGG 0.393797 5_4:-3997172 None:intergenic
GGTGTAAAATGTGGTATTTA+TGG 0.394524 5_4:+3993127 Msa0830940:CDS
CCATTTCAGGAACAGATTCC+AGG 0.395196 5_4:-3998174 None:intergenic
CTTGAAGAGCTCTCAAAGAT+TGG 0.398371 5_4:+3999377 Msa0830940:CDS
TTGGATTGGCAATATATTCA+TGG 0.401527 5_4:+3995758 Msa0830940:CDS
AGACCTCACAAAAGAGGTTC+TGG 0.403618 5_4:+3998279 Msa0830940:CDS
TGTTCAAGTACTGGTTTGCT+GGG 0.410196 5_4:-3999281 None:intergenic
AGCTGGGGTGAAGCGGCTAT+TGG 0.411629 5_4:+3996376 Msa0830940:CDS
AGTTGTTAATTGAAGATCTC+GGG 0.414008 5_4:+3996891 Msa0830940:CDS
TCTGCCCAATGTTCAAGTAC+TGG 0.418899 5_4:-3999290 None:intergenic
TCAGTTGCTCAAATACTATC+AGG 0.419597 5_4:+3999956 Msa0830940:CDS
ATACCTAAAGTATCATATAA+AGG 0.424051 5_4:-3994211 None:intergenic
TATACAGCAATTGTGAGCTT+CGG 0.424153 5_4:+3995697 Msa0830940:intron
TCCTCTTGGTGTGCTTGCAA+GGG 0.426219 5_4:-3998206 None:intergenic
GAGAGAGAGAAGAGCTATCA+TGG 0.426529 5_4:-3989585 None:intergenic
TGACAAAATTGTGTTCGATA+AGG 0.427629 5_4:+3997453 Msa0830940:CDS
CGTAGCATCTTCGCTAAAGA+TGG 0.429693 5_4:+3990016 Msa0830940:CDS
CGTTCCATATCAAATGGAAC+TGG 0.429994 5_4:-3999897 None:intergenic
TCCAGGCACGCATCCACATT+TGG 0.432219 5_4:-3998157 None:intergenic
GAGGGTAATAATATTCTCAT+TGG 0.435440 5_4:-3996351 None:intergenic
GTGGACTTCAATTCTCTCTC+TGG 0.438203 5_4:+3999329 Msa0830940:CDS
ATTGGAGAGTGGCAACCTAA+TGG 0.442586 5_4:+3998434 Msa0830940:CDS
CGATACGCAGGTCCTCTTGA+AGG 0.448610 5_4:-3989995 None:intergenic
TCATTGAGGAGACATTTATA+TGG 0.450467 5_4:+3996701 Msa0830940:CDS
AAGCAAGAAGTTGAAAAGCT+TGG 0.451391 5_4:+3995739 Msa0830940:CDS
GAAAACACCAATAACCTGTA+TGG 0.451975 5_4:-3998315 None:intergenic
ATGGTGGTTCAATAGGCTTC+TGG 0.452304 5_4:+3996725 Msa0830940:CDS
CTGGAATCTGTTCCTGAAAT+GGG 0.452978 5_4:+3998175 Msa0830940:CDS
GCTCTTAGCTGCTAAATTGT+TGG 0.459618 5_4:+3989446 None:intergenic
TCTTGTATGTCGGAGTGATA+AGG 0.462915 5_4:-3999923 None:intergenic
ATTGGATATCAATACTCCCT+TGG 0.463258 5_4:-3996333 None:intergenic
TCCTGGTCTTGATAGTTGCT+GGG 0.464933 5_4:+3990054 Msa0830940:CDS
ACCAAATGTGGATGCGTGCC+TGG 0.469468 5_4:+3998156 Msa0830940:CDS
TGCATGTGGAAAGTTACTTA+CGG 0.469805 5_4:+3997631 Msa0830940:CDS
CAGATTCAACAGAAGGAACT+TGG 0.470972 5_4:-3998547 None:intergenic
AGGTCACGTTCCATATCAAA+TGG 0.471049 5_4:-3999903 None:intergenic
CAAATGCATTTCTCAGGCAC+GGG 0.472110 5_4:-4000493 None:intergenic
GCAAACCAGTACTTGAACAT+TGG 0.474160 5_4:+3999285 Msa0830940:CDS
GGGTAGGGTGTTAGCATCTC+CGG 0.483667 5_4:-3989761 None:intergenic
CTTGGCTATAAATATTCTCC+AGG 0.484171 5_4:-3998529 None:intergenic
CCGTGCCTGAGAAATGCATT+TGG 0.484174 5_4:+4000494 Msa0830940:exon
CAAACCAGTACTTGAACATT+GGG 0.484337 5_4:+3999286 Msa0830940:CDS
GCCGCTTCACCCCAGCTAAG+AGG 0.487102 5_4:-3996370 None:intergenic
CAACTATCAAGACCAGGAAT+AGG 0.487174 5_4:-3990049 None:intergenic
GTTGATGGATGGTTCCATAC+AGG 0.491965 5_4:+3998301 Msa0830940:CDS
GGTTCAATAGGCTTCTGGCG+CGG 0.492279 5_4:+3996730 Msa0830940:CDS
ATATGTTGCGGTTGAAAACC+TGG 0.492865 5_4:+3998511 Msa0830940:CDS
AGAGCATACCATATCCTTGT+AGG 0.496672 5_4:-3997674 None:intergenic
TTCTCTCTCTGGAGATTCTA+GGG 0.497148 5_4:+3999340 Msa0830940:CDS
GGCCTCTTCTTCTTGTATGT+CGG 0.497266 5_4:-3999933 None:intergenic
TGATAAGTACACATCCTTCT+CGG 0.497391 5_4:-3996647 None:intergenic
AAGTTGTTAATTGAAGATCT+CGG 0.497471 5_4:+3996890 Msa0830940:CDS
ATGTATACTAGCGGAACTAC+TGG 0.501317 5_4:+3996305 Msa0830940:CDS
TATCCAAATAATCCTATGCT+TGG 0.502151 5_4:+3990772 Msa0830940:CDS
ATATTATTACCCTCTTAGCT+GGG 0.505221 5_4:+3996360 Msa0830940:CDS
AGAAGTTGAAAAGCTTGGAT+TGG 0.510392 5_4:+3995744 Msa0830940:CDS
GCTTGGTAGCCGAGAGATTG+TGG 0.513968 5_4:+3990789 Msa0830940:CDS
CAAATGGAACTGGGTCAAGA+TGG 0.514025 5_4:-3999887 None:intergenic
CCTTCCCGTCCACAATCTCT+CGG 0.515336 5_4:-3990798 None:intergenic
GTCGATGGAGTGTCTGGGTA+GGG 0.521566 5_4:-3989776 None:intergenic
CCAAATGAACTAGATATGCT+TGG 0.522719 5_4:+3998115 Msa0830940:CDS
ATTTATTCAACAGGGGACAT+TGG 0.526253 5_4:+3998416 Msa0830940:intron
CCCTCTTAGCTGGGGTGAAG+CGG 0.526428 5_4:+3996369 Msa0830940:CDS
CAAAGGTATGTGCGAGAGGA+AGG 0.528894 5_4:-3996672 None:intergenic
AAAGATTGGAAAGGAAAAGA+AGG 0.529034 5_4:+3999391 Msa0830940:CDS
CAACTCCAAATGCATTTCTC+AGG 0.529887 5_4:-4000499 None:intergenic
TATGAACACTAAGAAAGAAC+AGG 0.531733 5_4:+3989736 Msa0830940:five_prime_UTR
TACCTTTGATAGGGTCATTG+AGG 0.533634 5_4:+3996687 Msa0830940:CDS
TTGCAGGCTTGCAATGCTCA+TGG 0.535649 5_4:+3994175 Msa0830940:intron
CCGCTTCACCCCAGCTAAGA+GGG 0.536761 5_4:-3996369 None:intergenic
ATGTACAGACAGTAACCAAA+AGG 0.537206 5_4:-4000586 None:intergenic
TGAGACAAACGTTCCCGCAC+AGG 0.542982 5_4:-3998089 None:intergenic
ACGTGAAGACCTCACAAAAG+AGG 0.543040 5_4:+3998273 Msa0830940:CDS
TTGGTCCAAATATATCATGT+AGG 0.543992 5_4:+3989465 Msa0830940:five_prime_UTR
CCAAATGCATTTCTCAGGCA+CGG 0.545670 5_4:-4000494 None:intergenic
CTTTCCACATGCAAAGATAG+AGG 0.551047 5_4:-3997621 None:intergenic
CTGAGAAATGCATTTGGAGT+TGG 0.553113 5_4:+4000500 Msa0830940:exon
AAGTTGAATAACATGAAGAA+AGG 0.555049 5_4:+3997400 Msa0830940:CDS
GTAGGATTTAACAACCACTA+AGG 0.555350 5_4:+3989483 Msa0830940:five_prime_UTR
CTAGCAGTGGATGCATGCAT+TGG 0.555713 5_4:-3989624 None:intergenic
TGCAGAGTGGATTATGAGCA+TGG 0.556427 5_4:+3993159 Msa0830940:CDS
CTATCAAGACCAGGAATAGG+AGG 0.557455 5_4:-3990046 None:intergenic
TCTCGCACATACCTTTGATA+GGG 0.557834 5_4:+3996678 Msa0830940:CDS
AAGAGGTTCTGGTTGATGGA+TGG 0.558942 5_4:+3998290 Msa0830940:CDS
CTAGATATGCTTGGAACAGT+GGG 0.559533 5_4:+3998124 Msa0830940:CDS
AATATATTCAAGCTTTCGCA+AGG 0.559545 5_4:+3998485 Msa0830940:CDS
CTCCGACATACAAGAAGAAG+AGG 0.563503 5_4:+3999931 Msa0830940:CDS
ACACAGAAAATTTCTTCTGG+AGG 0.567816 5_4:+3997146 Msa0830940:CDS
TAGGTGAAGCAAGGTTTAGG+GGG 0.568060 5_4:+3997567 Msa0830940:intron
TACATATGATTATGAAGAGA+CGG 0.570345 5_4:+4000604 Msa0830940:three_prime_UTR
GAAGTATGAAGATTATTGAT+CGG 0.571287 5_4:+3998456 Msa0830940:CDS
GAGGAGACATTTATATGGCA+TGG 0.573299 5_4:+3996706 Msa0830940:CDS
CGGAACTACTGGTGACCCCA+AGG 0.575566 5_4:+3996316 Msa0830940:CDS
TTCCTTGGCAAAATTAACAA+TGG 0.576627 5_4:+4000746 Msa0830940:three_prime_UTR
CACGCATCCACATTTGGTAC+AGG 0.577541 5_4:-3998151 None:intergenic
AGTCGATGGAGTGTCTGGGT+AGG 0.578887 5_4:-3989777 None:intergenic
CCGAGAGATTGTGGACGGGA+AGG 0.579412 5_4:+3990798 Msa0830940:CDS
TATGACATGGTGATCAAAGT+CGG 0.580833 5_4:+3990974 Msa0830940:CDS
GTCGATGACATGTACAAAAG+TGG 0.581315 5_4:+4000462 Msa0830940:CDS
TCAAGACCAGGAATAGGAGG+AGG 0.586861 5_4:-3990043 None:intergenic
TTGTTTACAGTTGACCGAGA+AGG 0.588773 5_4:+3996633 Msa0830940:intron
CTTTAAATGCAGTTAAGTGT+CGG 0.593610 5_4:-3989833 None:intergenic
ACTGCTAGAACGTGATCTAG+TGG 0.594224 5_4:+3989639 Msa0830940:five_prime_UTR
ATCGATCGATCGTTTAGCCA+TGG 0.595370 5_4:+3989916 Msa0830940:exon
AACAGCATGGCAAGTACAAG+TGG 0.596150 5_4:+3990933 Msa0830940:intron
ACTAGATATGCTTGGAACAG+TGG 0.597796 5_4:+3998123 Msa0830940:CDS
CACTAAGAAAGAACAGGCGC+CGG 0.598100 5_4:+3989742 Msa0830940:five_prime_UTR
GCAGAAAAGATTCATCATTG+AGG 0.599840 5_4:+3989940 Msa0830940:CDS
ACTTGTGCTCATGTCCTACA+AGG 0.599867 5_4:+3997660 Msa0830940:CDS
AGACATACAGATTCAACAGA+AGG 0.600672 5_4:-3998554 None:intergenic
AAAAGGAAATAAATGAGCAA+AGG 0.602266 5_4:-4000569 None:intergenic
CTCCTCAATGACCCTATCAA+AGG 0.603858 5_4:-3996689 None:intergenic
TTCAATAGGCTTCTGGCGCG+GGG 0.604361 5_4:+3996732 Msa0830940:CDS
AGCAATTGTGAGCTTCGGAA+AGG 0.607509 5_4:+3995702 Msa0830940:intron
GAAAAGTCGATGGAGTGTCT+GGG 0.611133 5_4:-3989781 None:intergenic
AGGATTTGAGTTCATAAAAG+CGG 0.618243 5_4:+3999863 Msa0830940:CDS
GGTAGCCGAGAGATTGTGGA+CGG 0.618986 5_4:+3990793 Msa0830940:CDS
GGGTCCTCCTGTACCAAATG+TGG 0.620020 5_4:+3998144 Msa0830940:CDS
TATTATTACCCTCTTAGCTG+GGG 0.620868 5_4:+3996361 Msa0830940:CDS
GTTAACAACAGCAACAAGGA+AGG 0.622901 5_4:-3999258 None:intergenic
GGTCTGACTGAAACCTGTGC+GGG 0.625404 5_4:+3998076 Msa0830940:intron
ATCTCTCGGCTACCAAGCAT+AGG 0.625583 5_4:-3990784 None:intergenic
ATTATTTGGATATTTCTCAA+CGG 0.628492 5_4:-3990761 None:intergenic
GCGAAGATGCTACGATACGC+AGG 0.628778 5_4:-3990007 None:intergenic
AGAGCTCTCAAAGATTGGAA+AGG 0.632260 5_4:+3999382 Msa0830940:CDS
ACTAGATCACGTTCTAGCAG+TGG 0.633075 5_4:-3989637 None:intergenic
AGCACCTCTATCTTTGCATG+TGG 0.633297 5_4:+3997617 Msa0830940:CDS
AGAAGAAAATGGTATATCTG+TGG 0.634186 5_4:+3999310 Msa0830940:CDS
GCCCTTGCAAGCACACCAAG+AGG 0.634649 5_4:+3998205 Msa0830940:CDS
GGAAATTCTATCCGCAGCTG+TGG 0.634848 5_4:+3990995 Msa0830940:CDS
TTAGGTGAAGCAAGGTTTAG+GGG 0.636898 5_4:+3997566 Msa0830940:intron
CTATCAAAGGTATGTGCGAG+AGG 0.639078 5_4:-3996676 None:intergenic
TTTGTAGTACCCCGAAAACA+AGG 0.639552 5_4:-3998251 None:intergenic
GCATCCACATTTGGTACAGG+AGG 0.639658 5_4:-3998148 None:intergenic
GTTGTTAATTGAAGATCTCG+GGG 0.643103 5_4:+3996892 Msa0830940:CDS
GTACTTGATAGAGTGTACTC+AGG 0.645216 5_4:+3996950 Msa0830940:CDS
TGATAGTATTTGAGCAACTG+AGG 0.646048 5_4:-3999954 None:intergenic
ACGGAAGATAAACCTTCAAG+AGG 0.646702 5_4:+3989983 Msa0830940:CDS
TAAATGCAGTTAAGTGTCGG+TGG 0.646986 5_4:-3989830 None:intergenic
GTATCTTTCACAGTTGAGTG+AGG 0.647054 5_4:-4000638 None:intergenic
TTTGCAACGAATATTGTCAG+AGG 0.648137 5_4:-4000695 None:intergenic
AAATGCATTTCTCAGGCACG+GGG 0.650215 5_4:-4000492 None:intergenic
GGAACTACTGGTGACCCCAA+GGG 0.650731 5_4:+3996317 Msa0830940:CDS
AGTGTGTTGAGTTCTAGTAT+CGG 0.652502 5_4:-3989517 None:intergenic
TCCCAGCAACTATCAAGACC+AGG 0.653688 5_4:-3990055 None:intergenic
CTATGCATTGGAGATCAACA+AGG 0.655498 5_4:-3989688 None:intergenic
TTCGCAAGGAGAATATGTTG+CGG 0.657318 5_4:+3998499 Msa0830940:CDS
ATGGTGCCAATTCTGCAGAG+TGG 0.660085 5_4:+3993146 Msa0830940:CDS
GTTCCATATCAAATGGAACT+GGG 0.663113 5_4:-3999896 None:intergenic
GTAGCCGAGAGATTGTGGAC+GGG 0.663330 5_4:+3990794 Msa0830940:CDS
CAACAGGGGACATTGGAGAG+TGG 0.668033 5_4:+3998423 Msa0830940:intron
AGGTCTGACTGAAACCTGTG+CGG 0.671990 5_4:+3998075 Msa0830940:intron
TGGGGTTAACAACAGCAACA+AGG 0.674167 5_4:-3999262 None:intergenic
GTTCAAGTACTGGTTTGCTG+GGG 0.675997 5_4:-3999280 None:intergenic
GAAGTGGAGATGCTACTGCA+TGG 0.677777 5_4:-3997429 None:intergenic
TGCATTGGAGATCAACAAGG+TGG 0.692404 5_4:-3989685 None:intergenic
GAGACATTTATATGGCATGG+TGG 0.693735 5_4:+3996709 Msa0830940:CDS
TGTACAATAATGTATACTAG+CGG 0.700165 5_4:+3996296 Msa0830940:CDS
CTTCTCCATAACCACAGCTG+CGG 0.713750 5_4:-3991006 None:intergenic
TGGATATCAATACTCCCTTG+GGG 0.718015 5_4:-3996331 None:intergenic
GGTTTGCAGGGTGTAAAATG+TGG 0.719983 5_4:+3993118 Msa0830940:intron
TTACAAAGAAGTATATGACA+TGG 0.723910 5_4:+3990961 Msa0830940:CDS
TACACTCTATCAAGTACACG+AGG 0.731549 5_4:-3996944 None:intergenic
TGTGGAAAGTTACTTACGGG+TGG 0.735294 5_4:+3997635 Msa0830940:CDS
CAACAAGGTGGATGACACTG+TGG 0.747182 5_4:-3989673 None:intergenic
AGAGTGGATTATGAGCATGG+AGG 0.803600 5_4:+3993162 Msa0830940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAAAAATTATTTGTATT+TGG - chr5_4:3991213-3991232 None:intergenic 10.0%
!!! TAAAGTAGATATTATATTTT+AGG - chr5_4:3992056-3992075 None:intergenic 10.0%
!!! CAATAAAAATAAAAATTTTG+GGG + chr5_4:3992764-3992783 Msa0830940:intron 10.0%
!!! TTTTGTTTTTGTTTTTTTTT+TGG + chr5_4:3994515-3994534 Msa0830940:intron 10.0%
!!! TAGTTTTAATTTTCTTAATT+AGG + chr5_4:3997301-3997320 Msa0830940:intron 10.0%
!! TATATAGATACTATTTAAAT+TGG + chr5_4:3998349-3998368 Msa0830940:intron 10.0%
!!! TATTTTTTTCAACTTTATAT+GGG - chr5_4:3998630-3998649 None:intergenic 10.0%
!!! ATATTTTTTTCAACTTTATA+TGG - chr5_4:3998631-3998650 None:intergenic 10.0%
!!! AGTTTGATAATTTTTAATTA+CGG + chr5_4:3998772-3998791 Msa0830940:intron 10.0%
!! AAAATTTCACATTAATTTAA+AGG + chr5_4:3999491-3999510 Msa0830940:intron 10.0%
!! AAATTTCACATTAATTTAAA+GGG + chr5_4:3999492-3999511 Msa0830940:intron 10.0%
!!! TGAATATTTGAGTTAATTTT+TGG + chr5_4:3990436-3990455 Msa0830940:intron 15.0%
!!! TCTAAAAGTTTAGATTTTTA+GGG - chr5_4:3991838-3991857 None:intergenic 15.0%
!!! TTCTAAAAGTTTAGATTTTT+AGG - chr5_4:3991839-3991858 None:intergenic 15.0%
!! AGGAAATATTTATTATTGTT+TGG - chr5_4:3992036-3992055 None:intergenic 15.0%
!! TATCAATAGTCAAATATAAT+GGG - chr5_4:3992459-3992478 None:intergenic 15.0%
!! TTATCAATAGTCAAATATAA+TGG - chr5_4:3992460-3992479 None:intergenic 15.0%
!! TTTGCAAATAAATTTATTTG+AGG + chr5_4:3992688-3992707 Msa0830940:intron 15.0%
!! GTAGCTAAAAATATATTATT+GGG + chr5_4:3992710-3992729 Msa0830940:intron 15.0%
!! TAGCTAAAAATATATTATTG+GGG + chr5_4:3992711-3992730 Msa0830940:intron 15.0%
!!! TTTATTTTTATTGAATGGTT+AGG - chr5_4:3992757-3992776 None:intergenic 15.0%
!! CAAATTAATATCTAGAAAAT+GGG - chr5_4:3993550-3993569 None:intergenic 15.0%
!! ACAAATTAATATCTAGAAAA+TGG - chr5_4:3993551-3993570 None:intergenic 15.0%
!!! TTTCTAGATATTAATTTGTA+AGG + chr5_4:3993552-3993571 Msa0830940:intron 15.0%
!! AAATATATTCAAATAATTGC+AGG + chr5_4:3994159-3994178 Msa0830940:intron 15.0%
!! AGAAAAAATTATTATTGCAT+TGG - chr5_4:3994826-3994845 None:intergenic 15.0%
!! GTAACATAATATTAATTGAA+GGG - chr5_4:3994860-3994879 None:intergenic 15.0%
!! TGTAACATAATATTAATTGA+AGG - chr5_4:3994861-3994880 None:intergenic 15.0%
!! TTAAAGAGAAAATAATCATT+TGG - chr5_4:3994890-3994909 None:intergenic 15.0%
!!! ATTTCTTAGTAGTTTATTTT+TGG + chr5_4:3995471-3995490 Msa0830940:intron 15.0%
!!! TTTCTTAGTAGTTTATTTTT+GGG + chr5_4:3995472-3995491 Msa0830940:intron 15.0%
!! ATTAAAAATCAAATTAGGAA+TGG - chr5_4:3996217-3996236 None:intergenic 15.0%
!! CAAGTATTAAAAATCAAATT+AGG - chr5_4:3996222-3996241 None:intergenic 15.0%
!!! TTTTTTTTCTTTTTCTTTTC+AGG + chr5_4:3996548-3996567 Msa0830940:intron 15.0%
!!! ATTTTTTTCAACTTTATATG+GGG - chr5_4:3998629-3998648 None:intergenic 15.0%
!! AATTTCACATTAATTTAAAG+GGG + chr5_4:3999493-3999512 Msa0830940:intron 15.0%
!! TAAATCCTACATGATATATT+TGG - chr5_4:3989473-3989492 None:intergenic 20.0%
!! AAAATGAGAGAAAAAATAGA+GGG - chr5_4:3989565-3989584 None:intergenic 20.0%
!! TTGTAATAAATAGCTTATCA+TGG + chr5_4:3990606-3990625 Msa0830940:intron 20.0%
!! ATTATTTGGATATTTCTCAA+CGG - chr5_4:3990764-3990783 None:intergenic 20.0%
!! AAATAACCAAAAACAAAACA+AGG - chr5_4:3991072-3991091 None:intergenic 20.0%
!! ATGTATGATATTCAAATTCT+TGG + chr5_4:3991109-3991128 Msa0830940:intron 20.0%
!!! AATCTAAACTTTTAGAATGA+CGG + chr5_4:3991842-3991861 Msa0830940:intron 20.0%
!! ATTGTTTCCTTAAACAATAA+AGG + chr5_4:3992139-3992158 Msa0830940:intron 20.0%
!! TTGTTTCCTTAAACAATAAA+GGG + chr5_4:3992140-3992159 Msa0830940:intron 20.0%
!! AGAGATTAAACATATTTGTT+GGG - chr5_4:3992326-3992345 None:intergenic 20.0%
!! TAGAGATTAAACATATTTGT+TGG - chr5_4:3992327-3992346 None:intergenic 20.0%
!! TTTGTCATATATTGACATTT+CGG - chr5_4:3992625-3992644 None:intergenic 20.0%
!! GGTAGCTAAAAATATATTAT+TGG + chr5_4:3992709-3992728 Msa0830940:intron 20.0%
!!! ACAACAATTAATTTCAGTTT+TGG - chr5_4:3993520-3993539 None:intergenic 20.0%
!! AATAGGATAGATAAATGAAA+AGG - chr5_4:3993715-3993734 None:intergenic 20.0%
!! AGAATGAATGTATTGTATTA+AGG - chr5_4:3993818-3993837 None:intergenic 20.0%
!! TAGTAAAGGAATATTATAGA+AGG - chr5_4:3994108-3994127 None:intergenic 20.0%
!!! ATACCTAAAGTATCATATAA+AGG - chr5_4:3994214-3994233 None:intergenic 20.0%
!!! TTTTTGTTTTTTTTTTGGTC+AGG + chr5_4:3994520-3994539 Msa0830940:intron 20.0%
!!! TTTTGTTTTTTTTTTGGTCA+GGG + chr5_4:3994521-3994540 Msa0830940:intron 20.0%
!!! AGATAGTTTATCACAATTTT+AGG - chr5_4:3994699-3994718 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG - chr5_4:3994924-3994943 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG + chr5_4:3994923-3994942 Msa0830940:intron 20.0%
!! GAAATGAGTTATACATAAAA+TGG + chr5_4:3995069-3995088 Msa0830940:intron 20.0%
!! ATGGCATATAATAAATTCTA+TGG - chr5_4:3995385-3995404 None:intergenic 20.0%
!!! GAGTTTTTGAAATAAAGATA+GGG - chr5_4:3995564-3995583 None:intergenic 20.0%
!!! TGAGTTTTTGAAATAAAGAT+AGG - chr5_4:3995565-3995584 None:intergenic 20.0%
!!! AGATTTTGTAAGTAAAAGAA+AGG - chr5_4:3996599-3996618 None:intergenic 20.0%
!! AACTGTAAACAAAGAAAAAA+GGG - chr5_4:3996625-3996644 None:intergenic 20.0%
!! AATCCAAAAAAACATTTGTT+GGG - chr5_4:3996825-3996844 None:intergenic 20.0%
!! AAATCCAAAAAAACATTTGT+TGG - chr5_4:3996826-3996845 None:intergenic 20.0%
!! TATCAAGAAATGATTTACAA+AGG - chr5_4:3997014-3997033 None:intergenic 20.0%
!!! GTAAATCATTTCTTGATAAT+TGG + chr5_4:3997016-3997035 Msa0830940:intron 20.0%
!!! AATATACTTATTTTCTAGCT+GGG - chr5_4:3997097-3997116 None:intergenic 20.0%
!!! TAATATACTTATTTTCTAGC+TGG - chr5_4:3997098-3997117 None:intergenic 20.0%
!!! TTTGGTTTTGCAATTTTATT+AGG + chr5_4:3997548-3997567 Msa0830940:intron 20.0%
!!! GTATCTATATAGTTCAATTT+TGG - chr5_4:3998340-3998359 None:intergenic 20.0%
!! TAATGTAAAGTATACCAATA+TGG - chr5_4:3999000-3999019 None:intergenic 20.0%
!! TCATAATGAAATATAGAATG+TGG - chr5_4:3999027-3999046 None:intergenic 20.0%
!! ATTTCACATTAATTTAAAGG+GGG + chr5_4:3999494-3999513 Msa0830940:intron 20.0%
!!! GTTTTTATATTACGTTGAAA+AGG - chr5_4:3999580-3999599 None:intergenic 20.0%
!!! ACTAAAAGTATATGATTAGA+TGG - chr5_4:3999606-3999625 None:intergenic 20.0%
!!! TCTCTGAACAAAATTATTTT+GGG - chr5_4:3999712-3999731 None:intergenic 20.0%
!!! TTCTCTGAACAAAATTATTT+TGG - chr5_4:3999713-3999732 None:intergenic 20.0%
!! TAAAATATTATTCCATTCCT+TGG + chr5_4:4000731-4000750 Msa0830940:three_prime_UTR 20.0%
!! CTTCCTATTTTACTTTACTT+AGG + chr5_4:3989538-3989557 Msa0830940:five_prime_UTR 25.0%
! AAATGAGAGAAAAAATAGAG+GGG - chr5_4:3989564-3989583 None:intergenic 25.0%
! GAAAATGAGAGAAAAAATAG+AGG - chr5_4:3989566-3989585 None:intergenic 25.0%
! CATTGGAAAAAAGTAAGAAA+AGG - chr5_4:3989610-3989629 None:intergenic 25.0%
! TATCTTTATGTTCTATGCAT+TGG - chr5_4:3989703-3989722 None:intergenic 25.0%
!! GGAGAATGAGAAATTTTAAA+TGG - chr5_4:3989874-3989893 None:intergenic 25.0%
! AGAAAAATGGTTAAGTTAAG+CGG - chr5_4:3989895-3989914 None:intergenic 25.0%
!! TCGAATTTTCTTTCTAACAT+TGG + chr5_4:3990368-3990387 Msa0830940:intron 25.0%
! TACAAAATCTTGTCAAATAG+CGG - chr5_4:3990591-3990610 None:intergenic 25.0%
! TAACAACACTAGCAAAAATT+TGG + chr5_4:3990676-3990695 Msa0830940:intron 25.0%
! TAATACAATCAGAACTGAAA+CGG - chr5_4:3990724-3990743 None:intergenic 25.0%
! TATTATGAAACTTAACAGCA+TGG + chr5_4:3990920-3990939 Msa0830940:intron 25.0%
!! TTACAAAGAAGTATATGACA+TGG + chr5_4:3990961-3990980 Msa0830940:CDS 25.0%
!!! ATGAAACCTTGTTTTGTTTT+TGG + chr5_4:3991063-3991082 Msa0830940:intron 25.0%
! TATTTAATAGCTACAATCAG+CGG + chr5_4:3991159-3991178 Msa0830940:intron 25.0%
!!! ACACTTGTTTTAATATGTTC+TGG + chr5_4:3991301-3991320 Msa0830940:intron 25.0%
!!! TTCTACTTTTGTTTTGGTTT+AGG - chr5_4:3991634-3991653 None:intergenic 25.0%
!! TATAAATGTTCCGACATTTT+AGG - chr5_4:3992005-3992024 None:intergenic 25.0%
! TAAAATGTCGGAACATTTAT+AGG + chr5_4:3992004-3992023 Msa0830940:intron 25.0%
!! GTTTGTTGATCAATAAGTTA+AGG + chr5_4:3992112-3992131 Msa0830940:intron 25.0%
! GAAAATGCATAATATATGCA+AGG + chr5_4:3992562-3992581 Msa0830940:intron 25.0%
! GTTCAAAGAAATTAAGTAAG+AGG - chr5_4:3992876-3992895 None:intergenic 25.0%
!! ATTTTGAATTTCTTTCGTCT+TGG + chr5_4:3993193-3993212 Msa0830940:intron 25.0%
! CATTTATCTATCCTATTAAC+CGG + chr5_4:3993718-3993737 Msa0830940:intron 25.0%
! GCAAAGAAATAAATAAGAAC+GGG - chr5_4:3993902-3993921 None:intergenic 25.0%
! GGCAAAGAAATAAATAAGAA+CGG - chr5_4:3993903-3993922 None:intergenic 25.0%
! TAGTCCTTGTTGAATATAAA+GGG + chr5_4:3993958-3993977 Msa0830940:intron 25.0%
! AAAACTTAATAACAATCGAG+TGG - chr5_4:3994138-3994157 None:intergenic 25.0%
! GTTCCTTTATATGATACTTT+AGG + chr5_4:3994208-3994227 Msa0830940:CDS 25.0%
! TGTAAAATCTCATGTACAAT+AGG - chr5_4:3994305-3994324 None:intergenic 25.0%
!! GGTAAATTTTTCGCATAAAT+TGG - chr5_4:3994400-3994419 None:intergenic 25.0%
! AGGAACTTTGTAAATAAAAC+AGG - chr5_4:3994421-3994440 None:intergenic 25.0%
! AAAAACTTTGCTCATAAAGT+AGG - chr5_4:3994623-3994642 None:intergenic 25.0%
!!! AAACGACACTCATTTTAAAA+CGG - chr5_4:3994760-3994779 None:intergenic 25.0%
! AAACAAACCAATAGTTGATT+AGG + chr5_4:3994914-3994933 Msa0830940:intron 25.0%
! ATGAGTTATACATAAAATGG+TGG + chr5_4:3995072-3995091 Msa0830940:intron 25.0%
! TGAGTTATACATAAAATGGT+GGG + chr5_4:3995073-3995092 Msa0830940:intron 25.0%
!!! TTTTAACACCCACTTTTTAT+CGG - chr5_4:3995116-3995135 None:intergenic 25.0%
!!! GTGTTTTTAGCATTTAATAC+TGG + chr5_4:3995140-3995159 Msa0830940:intron 25.0%
!!! GATTTTGATGATGAGTATTT+TGG + chr5_4:3995183-3995202 Msa0830940:intron 25.0%
!!! GATTTTGATGATGAGTATTT+TGG + chr5_4:3995183-3995202 Msa0830940:intron 25.0%
! TGAATGTGAAAATGTTAGAA+TGG - chr5_4:3995290-3995309 None:intergenic 25.0%
!!! TTTGATTTTCCAATTATCAC+TGG + chr5_4:3995320-3995339 Msa0830940:intron 25.0%
!!! TTAGTAGTTTATTTTTGGGA+AGG + chr5_4:3995476-3995495 Msa0830940:intron 25.0%
! TTAAAATACATGTGCTTTAG+AGG + chr5_4:3995652-3995671 Msa0830940:intron 25.0%
!! TAAAATACATGTGCTTTAGA+GGG + chr5_4:3995653-3995672 Msa0830940:intron 25.0%
!!! ATGGACTGAATTTTTACAAT+TGG + chr5_4:3995777-3995796 Msa0830940:CDS 25.0%
! CAATTCAAGTAAGAAGAATA+AGG + chr5_4:3996024-3996043 Msa0830940:intron 25.0%
! TGTACAATAATGTATACTAG+CGG + chr5_4:3996296-3996315 Msa0830940:CDS 25.0%
! TATATCTAATTTCAAAGCTC+TGG + chr5_4:3996519-3996538 Msa0830940:intron 25.0%
! ACTGTAAACAAAGAAAAAAG+GGG - chr5_4:3996624-3996643 None:intergenic 25.0%
! CAACTGTAAACAAAGAAAAA+AGG - chr5_4:3996626-3996645 None:intergenic 25.0%
!! ATCCAAAAAAACATTTGTTG+GGG - chr5_4:3996824-3996843 None:intergenic 25.0%
! AAGTTGTTAATTGAAGATCT+CGG + chr5_4:3996890-3996909 Msa0830940:CDS 25.0%
! AAAAATAGGTAAGAAATGTG+GGG - chr5_4:3997055-3997074 None:intergenic 25.0%
! GAAAAATAGGTAAGAAATGT+GGG - chr5_4:3997056-3997075 None:intergenic 25.0%
! AGAAAAATAGGTAAGAAATG+TGG - chr5_4:3997057-3997076 None:intergenic 25.0%
! TGAATCCTCTATATGATATT+AGG + chr5_4:3997229-3997248 Msa0830940:intron 25.0%
! AGTTTCCTAATATCATATAG+AGG - chr5_4:3997237-3997256 None:intergenic 25.0%
! AAGTTGAATAACATGAAGAA+AGG + chr5_4:3997400-3997419 Msa0830940:CDS 25.0%
! TTGAAATACAAAACTAGACT+TGG - chr5_4:3997823-3997842 None:intergenic 25.0%
! TATTTCAATTGCTGAGTATA+TGG + chr5_4:3997835-3997854 Msa0830940:intron 25.0%
! TTTAAACAAATTTCTCCTCT+TGG - chr5_4:3998223-3998242 None:intergenic 25.0%
!! AGAGGAGAAATTTGTTTAAA+AGG + chr5_4:3998223-3998242 Msa0830940:CDS 25.0%
! ATACTATTTAAATTGGCTGT+TGG + chr5_4:3998356-3998375 Msa0830940:intron 25.0%
! ATAATCTTCATACTTCCATT+AGG - chr5_4:3998452-3998471 None:intergenic 25.0%
! GAAGTATGAAGATTATTGAT+CGG + chr5_4:3998456-3998475 Msa0830940:CDS 25.0%
! ATGCAATTTGGATTATGTTA+AGG - chr5_4:3998865-3998884 None:intergenic 25.0%
! CTAGAAATAAGAATGCAATT+TGG - chr5_4:3998877-3998896 None:intergenic 25.0%
! AATAAAAGTTCAAATCAGCA+CGG - chr5_4:3999197-3999216 None:intergenic 25.0%
!! TCTAAAAAAGTATGTTGTGT+GGG - chr5_4:3999551-3999570 None:intergenic 25.0%
!! TTCTAAAAAAGTATGTTGTG+TGG - chr5_4:3999552-3999571 None:intergenic 25.0%
! GTTAATTAAGATTCAATGAC+TGG + chr5_4:3999682-3999701 Msa0830940:intron 25.0%
!!! TGTTCAGAGAATATTTTAAG+TGG + chr5_4:3999722-3999741 Msa0830940:intron 25.0%
! ACATGTAGAATAGAATCAAT+TGG - chr5_4:3999772-3999791 None:intergenic 25.0%
!!! ATATGTTTTTGACAGTTGAA+AGG + chr5_4:3999843-3999862 Msa0830940:intron 25.0%
!!! GAACTTTTTTTTTTTCTTCC+CGG + chr5_4:4000072-4000091 Msa0830940:intron 25.0%
! TAGTTGAATCCTAAGTAATT+TGG + chr5_4:4000224-4000243 Msa0830940:intron 25.0%
! TTAGGTATTCCAAATTACTT+AGG - chr5_4:4000236-4000255 None:intergenic 25.0%
!! TAAGTAATTTGGAATACCTA+AGG + chr5_4:4000235-4000254 Msa0830940:intron 25.0%
! AATTATCAAGTCCATAAAAC+AGG - chr5_4:4000389-4000408 None:intergenic 25.0%
! AAAAGGAAATAAATGAGCAA+AGG - chr5_4:4000572-4000591 None:intergenic 25.0%
!! TTTGCTCATTTATTTCCTTT+TGG + chr5_4:4000571-4000590 Msa0830940:three_prime_UTR 25.0%
! TACATATGATTATGAAGAGA+CGG + chr5_4:4000604-4000623 Msa0830940:three_prime_UTR 25.0%
TTGGTCCAAATATATCATGT+AGG + chr5_4:3989465-3989484 Msa0830940:five_prime_UTR 30.0%
TATGAACACTAAGAAAGAAC+AGG + chr5_4:3989736-3989755 Msa0830940:five_prime_UTR 30.0%
!!! TTTTGACTTTGAAAAGTCGA+TGG - chr5_4:3989794-3989813 None:intergenic 30.0%
CTTTAAATGCAGTTAAGTGT+CGG - chr5_4:3989836-3989855 None:intergenic 30.0%
AAAATGAACAGAATCTGATC+TGG - chr5_4:3990216-3990235 None:intergenic 30.0%
!!! GTTAATTTTTGGCTCGATTT+TGG + chr5_4:3990447-3990466 Msa0830940:intron 30.0%
TATCCAAATAATCCTATGCT+TGG + chr5_4:3990772-3990791 Msa0830940:CDS 30.0%
AATAAGTCAAAATCCATGAC+CGG - chr5_4:3990885-3990904 None:intergenic 30.0%
! CAAAACAAGGTTTCATTTTC+TGG - chr5_4:3991059-3991078 None:intergenic 30.0%
! TTGGATTTTCTGTACATGAT+GGG + chr5_4:3991128-3991147 Msa0830940:intron 30.0%
! AGCTAGCGTAATTTTTATGA+AGG + chr5_4:3991185-3991204 Msa0830940:intron 30.0%
! GCTAGCGTAATTTTTATGAA+GGG + chr5_4:3991186-3991205 Msa0830940:intron 30.0%
! CTAGCGTAATTTTTATGAAG+GGG + chr5_4:3991187-3991206 Msa0830940:intron 30.0%
!! ATGAATTTGTTAACCCAGTT+CGG + chr5_4:3991426-3991445 Msa0830940:intron 30.0%
!! GGTAACTTCTACTTTTGTTT+TGG - chr5_4:3991640-3991659 None:intergenic 30.0%
AATATCCTTGTTCTGTAAGT+TGG - chr5_4:3992275-3992294 None:intergenic 30.0%
TGCATAATATATGCAAGGTT+CGG + chr5_4:3992567-3992586 Msa0830940:intron 30.0%
GAGCTTAATTCATATATTGC+TGG + chr5_4:3993097-3993116 Msa0830940:intron 30.0%
GGTGTAAAATGTGGTATTTA+TGG + chr5_4:3993127-3993146 Msa0830940:CDS 30.0%
GACTTTGATTAGAAGGTTTA+GGG - chr5_4:3993454-3993473 None:intergenic 30.0%
TGACTTTGATTAGAAGGTTT+AGG - chr5_4:3993455-3993474 None:intergenic 30.0%
CTACAATGACTTTGATTAGA+AGG - chr5_4:3993461-3993480 None:intergenic 30.0%
TCTAATCAAAGTCATTGTAG+AGG + chr5_4:3993461-3993480 Msa0830940:intron 30.0%
AGGATAGATAAATGAAAAGG+AGG - chr5_4:3993712-3993731 None:intergenic 30.0%
ACAGTTGAAAAACAGATGTA+TGG - chr5_4:3993752-3993771 None:intergenic 30.0%
! TTAAAAGTGTATTCTAGGAG+AGG - chr5_4:3993785-3993804 None:intergenic 30.0%
TGTATTGTATTAAGGAGAGA+GGG - chr5_4:3993810-3993829 None:intergenic 30.0%
ATGTATTGTATTAAGGAGAG+AGG - chr5_4:3993811-3993830 None:intergenic 30.0%
! ATTCTGTTTGTTGCAGATTA+TGG + chr5_4:3993833-3993852 Msa0830940:intron 30.0%
GAACAACCAAAAGAAAACAT+AGG - chr5_4:3993927-3993946 None:intergenic 30.0%
GTAGTCCTTGTTGAATATAA+AGG + chr5_4:3993957-3993976 Msa0830940:intron 30.0%
ATTGCCCTTTATATTCAACA+AGG - chr5_4:3993965-3993984 None:intergenic 30.0%
GATGAAACAGAGTTTCAATA+AGG - chr5_4:3993997-3994016 None:intergenic 30.0%
TGTAGAAAGTAGACATTCAA+AGG - chr5_4:3994019-3994038 None:intergenic 30.0%
TTATTGCTCTTATGCTTTCA+TGG + chr5_4:3994057-3994076 Msa0830940:intron 30.0%
AATATTATAGAAGGTGACCA+GGG - chr5_4:3994099-3994118 None:intergenic 30.0%
AATCTCATGTACAATAGGTT+TGG - chr5_4:3994300-3994319 None:intergenic 30.0%
! TTGCAACGTTTTTGTCAATA+TGG + chr5_4:3994345-3994364 Msa0830940:intron 30.0%
TAAGAACTTTGATGTCTATC+TGG + chr5_4:3994487-3994506 Msa0830940:intron 30.0%
!!! TTTAACACCCACTTTTTATC+GGG - chr5_4:3995115-3995134 None:intergenic 30.0%
ATCATCAAAATCTACACCAT+GGG - chr5_4:3995175-3995194 None:intergenic 30.0%
!!! TTGATGATGAGTATTTTGGT+AGG + chr5_4:3995187-3995206 Msa0830940:intron 30.0%
ATCATCAAAATCTACACCAT+GGG - chr5_4:3995175-3995194 None:intergenic 30.0%
!!! TTGATGATGAGTATTTTGGT+AGG + chr5_4:3995187-3995206 Msa0830940:intron 30.0%
!! AATGGCATTTATTTTCGAAG+TGG - chr5_4:3995272-3995291 None:intergenic 30.0%
GTATCAAAACCAGTGATAAT+TGG - chr5_4:3995332-3995351 None:intergenic 30.0%
CTCTCATACATATATGACTT+AGG + chr5_4:3995351-3995370 Msa0830940:intron 30.0%
TACATATATGACTTAGGTTC+TGG + chr5_4:3995357-3995376 Msa0830940:intron 30.0%
ACATATATGACTTAGGTTCT+GGG + chr5_4:3995358-3995377 Msa0830940:intron 30.0%
ATTTATTATATGCCATGCAG+AGG + chr5_4:3995389-3995408 Msa0830940:intron 30.0%
TATTTCAATAGATGAACCTC+AGG - chr5_4:3995447-3995466 None:intergenic 30.0%
TTGAGATATTTGGTTGCATT+TGG - chr5_4:3995604-3995623 None:intergenic 30.0%
ACACTTACTCTTGAGATATT+TGG - chr5_4:3995614-3995633 None:intergenic 30.0%
!! TTGGATTGGCAATATATTCA+TGG + chr5_4:3995758-3995777 Msa0830940:CDS 30.0%
TTCTACTCTTGCTTGTAAAT+TGG + chr5_4:3995830-3995849 Msa0830940:intron 30.0%
CAATGCCAATTGATTATACA+AGG - chr5_4:3995870-3995889 None:intergenic 30.0%
GTTGAATTGTATCACTATCT+CGG + chr5_4:3995931-3995950 Msa0830940:intron 30.0%
AGAAGAATAAGGATGATATC+AGG + chr5_4:3996035-3996054 Msa0830940:intron 30.0%
TGGAAAGTAAATGCATTGTT+TGG + chr5_4:3996062-3996081 Msa0830940:intron 30.0%
! ATTGTTTGGTTAGTTGACTT+GGG + chr5_4:3996076-3996095 Msa0830940:intron 30.0%
TCTAAACCTCATTACAAGTA+TGG + chr5_4:3996137-3996156 Msa0830940:intron 30.0%
CTACTTCTATAGACATATTG+TGG + chr5_4:3996188-3996207 Msa0830940:intron 30.0%
! TGATTTTTAATACTTGCCAC+AGG + chr5_4:3996226-3996245 Msa0830940:intron 30.0%
! GATTTTTAATACTTGCCACA+GGG + chr5_4:3996227-3996246 Msa0830940:intron 30.0%
! ATATCGCTTCTTTTCTTTAC+AGG - chr5_4:3996275-3996294 None:intergenic 30.0%
GAGGGTAATAATATTCTCAT+TGG - chr5_4:3996354-3996373 None:intergenic 30.0%
AATATTATTACCCTCTTAGC+TGG + chr5_4:3996359-3996378 Msa0830940:CDS 30.0%
ATATTATTACCCTCTTAGCT+GGG + chr5_4:3996360-3996379 Msa0830940:CDS 30.0%
TGTAAACAAAGAAAAAAGGG+GGG - chr5_4:3996622-3996641 None:intergenic 30.0%
CTGTAAACAAAGAAAAAAGG+GGG - chr5_4:3996623-3996642 None:intergenic 30.0%
TCATTGAGGAGACATTTATA+TGG + chr5_4:3996701-3996720 Msa0830940:CDS 30.0%
AGTTGTTAATTGAAGATCTC+GGG + chr5_4:3996891-3996910 Msa0830940:CDS 30.0%
!!! AAAACCAACTTTTTTCTGTG+CGG + chr5_4:3996919-3996938 Msa0830940:CDS 30.0%
! TCATTTCTTGATAATTGGAG+TGG + chr5_4:3997021-3997040 Msa0830940:intron 30.0%
! CATTTCTTGATAATTGGAGT+GGG + chr5_4:3997022-3997041 Msa0830940:intron 30.0%
AAAATAGGTAAGAAATGTGG+GGG - chr5_4:3997054-3997073 None:intergenic 30.0%
!!! TTATTTTCTAGCTGGGAAAA+GGG - chr5_4:3997090-3997109 None:intergenic 30.0%
TTGACACAGAAAATTTCTTC+TGG + chr5_4:3997143-3997162 Msa0830940:CDS 30.0%
AGTTGAATAATGTCTTCTTC+AGG - chr5_4:3997175-3997194 None:intergenic 30.0%
AAATTCTCAGAGCTTATGTT+TGG - chr5_4:3997372-3997391 None:intergenic 30.0%
! AACACAATTTTGTCAAGAAG+TGG - chr5_4:3997448-3997467 None:intergenic 30.0%
TGACAAAATTGTGTTCGATA+AGG + chr5_4:3997453-3997472 Msa0830940:CDS 30.0%
! CAATTTTATTAGGTGAAGCA+AGG + chr5_4:3997558-3997577 Msa0830940:intron 30.0%
TATGTATGTGCTTATTGCAT+GGG - chr5_4:3997725-3997744 None:intergenic 30.0%
TAGTCTAACTGAAATCTATG+TGG + chr5_4:3997942-3997961 Msa0830940:intron 30.0%
CATTATTACATATGCTGCAT+TGG - chr5_4:3997992-3998011 None:intergenic 30.0%
AGATATCAGCATATGTACTA+TGG + chr5_4:3998013-3998032 Msa0830940:intron 30.0%
GTCTTTGTTGAAATGAAAAC+AGG + chr5_4:3998055-3998074 Msa0830940:intron 30.0%
AATTGCGTGATTTATTCAAC+AGG + chr5_4:3998407-3998426 Msa0830940:intron 30.0%
ATTGCGTGATTTATTCAACA+GGG + chr5_4:3998408-3998427 Msa0830940:intron 30.0%
AATATATTCAAGCTTTCGCA+AGG + chr5_4:3998485-3998504 Msa0830940:CDS 30.0%
GAATAATTTCACTACAAGCT+AGG - chr5_4:3998607-3998626 None:intergenic 30.0%
AAATATTAGCTGCTCATGAT+TGG - chr5_4:3998745-3998764 None:intergenic 30.0%
!! ATTGCATTCTTATTTCTAGC+TGG + chr5_4:3998878-3998897 Msa0830940:intron 30.0%
AGAAGAAAATGGTATATCTG+TGG + chr5_4:3999310-3999329 Msa0830940:CDS 30.0%
AAAGATTGGAAAGGAAAAGA+AGG + chr5_4:3999391-3999410 Msa0830940:CDS 30.0%
AAAGTATATGATTAGATGGC+TGG - chr5_4:3999602-3999621 None:intergenic 30.0%
!! TATTTTAAGTGGTCTGTGTA+TGG + chr5_4:3999733-3999752 Msa0830940:intron 30.0%
! CCATCATCACATAAATTTTC+AGG - chr5_4:3999823-3999842 None:intergenic 30.0%
CCTGAAAATTTATGTGATGA+TGG + chr5_4:3999820-3999839 Msa0830940:intron 30.0%
! AGGATTTGAGTTCATAAAAG+CGG + chr5_4:3999863-3999882 Msa0830940:CDS 30.0%
GTAAAAGTTGTCAAATTCTC+AGG + chr5_4:3999978-3999997 Msa0830940:intron 30.0%
GATATTAAAGCAGAGAAACA+GGG - chr5_4:4000166-4000185 None:intergenic 30.0%
TGATATTAAAGCAGAGAAAC+AGG - chr5_4:4000167-4000186 None:intergenic 30.0%
TTTACTTACACATTCACCTT+AGG - chr5_4:4000254-4000273 None:intergenic 30.0%
! TTGAAACGTTAAAAGTGCAA+TGG - chr5_4:4000364-4000383 None:intergenic 30.0%
! ATATTCGTTGCAAACTTTTG+TGG + chr5_4:4000704-4000723 Msa0830940:three_prime_UTR 30.0%
! TTGTTAATTTTGCCAAGGAA+TGG - chr5_4:4000746-4000765 None:intergenic 30.0%
TTCCTTGGCAAAATTAACAA+TGG + chr5_4:4000746-4000765 Msa0830940:three_prime_UTR 30.0%
GTAGGATTTAACAACCACTA+AGG + chr5_4:3989483-3989502 Msa0830940:five_prime_UTR 35.0%
! AGTGTGTTGAGTTCTAGTAT+CGG - chr5_4:3989520-3989539 None:intergenic 35.0%
GGGCCTAAGTAAAGTAAAAT+AGG - chr5_4:3989544-3989563 None:intergenic 35.0%
GCAGAAAAGATTCATCATTG+AGG + chr5_4:3989940-3989959 Msa0830940:CDS 35.0%
! ATAGTTGCTGGGATGTTTTT+CGG + chr5_4:3990065-3990084 Msa0830940:CDS 35.0%
ATGACAGTATGAAATCGACA+TGG - chr5_4:3990127-3990146 None:intergenic 35.0%
!!! CTTTTTTTTTGTGCGCATAG+AGG + chr5_4:3990410-3990429 Msa0830940:intron 35.0%
GGCTAATGTCTTATCAATAC+AGG - chr5_4:3990703-3990722 None:intergenic 35.0%
CTACCAAGCATAGGATTATT+TGG - chr5_4:3990778-3990797 None:intergenic 35.0%
TATGACATGGTGATCAAAGT+CGG + chr5_4:3990974-3990993 Msa0830940:CDS 35.0%
! CTTGGATTTTCTGTACATGA+TGG + chr5_4:3991127-3991146 Msa0830940:intron 35.0%
CGAGATGTTGGAACATTAAA+CGG - chr5_4:3991352-3991371 None:intergenic 35.0%
TTCTGTTAATCACGAGATGT+TGG - chr5_4:3991364-3991383 None:intergenic 35.0%
GAGCTATTGAATAAGTTTGC+TGG - chr5_4:3991482-3991501 None:intergenic 35.0%
TAGGTCATATAGTGTAAACG+AGG - chr5_4:3991515-3991534 None:intergenic 35.0%
TCGTTTACACTATATGACCT+AGG + chr5_4:3991514-3991533 Msa0830940:intron 35.0%
!!! TGTTTTGGTTTAGGTCTGAT+AGG - chr5_4:3991625-3991644 None:intergenic 35.0%
CATTCCTAAACAAGTATCAC+AGG + chr5_4:3991732-3991751 Msa0830940:intron 35.0%
! CTTTTATACTGAAGCAGCTT+GGG + chr5_4:3991896-3991915 Msa0830940:intron 35.0%
CTTGGGCTAAATAATTCGTT+GGG + chr5_4:3991913-3991932 Msa0830940:intron 35.0%
ACAAGAATCAGAAACAGTTC+TGG + chr5_4:3991974-3991993 Msa0830940:intron 35.0%
TCTGGAAAGTCCTAAAATGT+CGG + chr5_4:3991992-3992011 Msa0830940:intron 35.0%
TATCATCTAAGAATCAGCTG+TGG - chr5_4:3992087-3992106 None:intergenic 35.0%
!! TATAATGGGCGATGGTTTAA+TGG - chr5_4:3992445-3992464 None:intergenic 35.0%
!! TAGTCAAATATAATGGGCGA+TGG - chr5_4:3992453-3992472 None:intergenic 35.0%
GCATAATATATGCAAGGTTC+GGG + chr5_4:3992568-3992587 Msa0830940:intron 35.0%
CATAATATATGCAAGGTTCG+GGG + chr5_4:3992569-3992588 Msa0830940:intron 35.0%
!!! TGACATTTCGGTCTCTTTTT+TGG - chr5_4:3992613-3992632 None:intergenic 35.0%
AACTCACATGAACATGTTCT+TGG - chr5_4:3992957-3992976 None:intergenic 35.0%
!! TTCATATATTGCTGGTTTGC+AGG + chr5_4:3993105-3993124 Msa0830940:intron 35.0%
!! TCATATATTGCTGGTTTGCA+GGG + chr5_4:3993106-3993125 Msa0830940:intron 35.0%
CACAAAACAAGACCTTCAAT+GGG - chr5_4:3993297-3993316 None:intergenic 35.0%
AAAAGTTGGACACATTGGAT+TGG - chr5_4:3993417-3993436 None:intergenic 35.0%
AGAAACAAGAGGGAAAAAGT+TGG - chr5_4:3993431-3993450 None:intergenic 35.0%
CCTCAATTAAAGCCTATAAC+TGG - chr5_4:3993495-3993514 None:intergenic 35.0%
! CCAGTTATAGGCTTTAATTG+AGG + chr5_4:3993492-3993511 Msa0830940:intron 35.0%
! GAGGTTAGAAGAGTACAAAT+CGG - chr5_4:3993693-3993712 None:intergenic 35.0%
GAAAAACAGATGTATGGTGT+AGG - chr5_4:3993746-3993765 None:intergenic 35.0%
! GGGGATTAAAAGTGTATTCT+AGG - chr5_4:3993790-3993809 None:intergenic 35.0%
GTATTGTATTAAGGAGAGAG+GGG - chr5_4:3993809-3993828 None:intergenic 35.0%
! TTGCCTCCTATGTTTTCTTT+TGG + chr5_4:3993918-3993937 Msa0830940:intron 35.0%
CAACCAAAAGAAAACATAGG+AGG - chr5_4:3993924-3993943 None:intergenic 35.0%
GAATATTATAGAAGGTGACC+AGG - chr5_4:3994100-3994119 None:intergenic 35.0%
! CTTTGACTGCAATTGGATTT+TGG + chr5_4:3994271-3994290 Msa0830940:intron 35.0%
TTTAGGCAAGTGACAGATTT+CGG - chr5_4:3994682-3994701 None:intergenic 35.0%
TTCCTTAATCTGTGTGCAAT+TGG + chr5_4:3994980-3994999 Msa0830940:intron 35.0%
!!! GACACTGATTTTGAAACGAA+GGG + chr5_4:3995010-3995029 Msa0830940:intron 35.0%
AGTACTATGCAGGAAATTAG+TGG + chr5_4:3995033-3995052 Msa0830940:intron 35.0%
GTACTATGCAGGAAATTAGT+GGG + chr5_4:3995034-3995053 Msa0830940:intron 35.0%
TACTATGCAGGAAATTAGTG+GGG + chr5_4:3995035-3995054 Msa0830940:intron 35.0%
GATTTGACCCGATAAAAAGT+GGG + chr5_4:3995105-3995124 Msa0830940:intron 35.0%
CATCATCAAAATCTACACCA+TGG - chr5_4:3995176-3995195 None:intergenic 35.0%
CATCATCAAAATCTACACCA+TGG - chr5_4:3995176-3995195 None:intergenic 35.0%
CATATATGACTTAGGTTCTG+GGG + chr5_4:3995359-3995378 Msa0830940:intron 35.0%
AGAAGAAAAGAAGATACCTG+AGG + chr5_4:3995428-3995447 Msa0830940:intron 35.0%
AATAAAGATAGGGATCAGAC+AGG - chr5_4:3995554-3995573 None:intergenic 35.0%
TATACAGCAATTGTGAGCTT+CGG + chr5_4:3995697-3995716 Msa0830940:intron 35.0%
!! AACTTCTTGCTTTTGTTCAG+GGG - chr5_4:3995731-3995750 None:intergenic 35.0%
!! CAACTTCTTGCTTTTGTTCA+GGG - chr5_4:3995732-3995751 None:intergenic 35.0%
!! TCAACTTCTTGCTTTTGTTC+AGG - chr5_4:3995733-3995752 None:intergenic 35.0%
AAGCAAGAAGTTGAAAAGCT+TGG + chr5_4:3995739-3995758 Msa0830940:CDS 35.0%
AGAAGTTGAAAAGCTTGGAT+TGG + chr5_4:3995744-3995763 Msa0830940:CDS 35.0%
CTGCTCCTTGTATAATCAAT+TGG + chr5_4:3995862-3995881 Msa0830940:intron 35.0%
CAACTATTTATGCTGCAAAG+GGG - chr5_4:3995911-3995930 None:intergenic 35.0%
CCAACTATTTATGCTGCAAA+GGG - chr5_4:3995912-3995931 None:intergenic 35.0%
ACCAACTATTTATGCTGCAA+AGG - chr5_4:3995913-3995932 None:intergenic 35.0%
TAAGGATGATATCAGGTCAA+TGG + chr5_4:3996042-3996061 Msa0830940:intron 35.0%
! CATTGTTTGGTTAGTTGACT+TGG + chr5_4:3996075-3996094 Msa0830940:intron 35.0%
TTGGATATCAATACTCCCTT+GGG - chr5_4:3996335-3996354 None:intergenic 35.0%
ATTGGATATCAATACTCCCT+TGG - chr5_4:3996336-3996355 None:intergenic 35.0%
TATTATTACCCTCTTAGCTG+GGG + chr5_4:3996361-3996380 Msa0830940:CDS 35.0%
TGATAAGTACACATCCTTCT+CGG - chr5_4:3996650-3996669 None:intergenic 35.0%
!!! CACCCCAACAAATGTTTTTT+TGG + chr5_4:3996819-3996838 Msa0830940:intron 35.0%
GTTGTTAATTGAAGATCTCG+GGG + chr5_4:3996892-3996911 Msa0830940:CDS 35.0%
!!! TATTTTCTAGCTGGGAAAAG+GGG - chr5_4:3997089-3997108 None:intergenic 35.0%
!!! CTTATTTTCTAGCTGGGAAA+AGG - chr5_4:3997091-3997110 None:intergenic 35.0%
ACACAGAAAATTTCTTCTGG+AGG + chr5_4:3997146-3997165 Msa0830940:CDS 35.0%
GGAATATTGCAATGCTTACT+GGG - chr5_4:3997351-3997370 None:intergenic 35.0%
TGGAATATTGCAATGCTTAC+TGG - chr5_4:3997352-3997371 None:intergenic 35.0%
AATACATTGCTGTCAAACTG+CGG - chr5_4:3997512-3997531 None:intergenic 35.0%
! AGCAATGTATTTTCTCCTCT+TGG + chr5_4:3997521-3997540 Msa0830940:intron 35.0%
TATTAGGTGAAGCAAGGTTT+AGG + chr5_4:3997564-3997583 Msa0830940:intron 35.0%
ATTAGGTGAAGCAAGGTTTA+GGG + chr5_4:3997565-3997584 Msa0830940:intron 35.0%
!!! AGTGTACGTCTTATTTTGTC+TGG + chr5_4:3997591-3997610 Msa0830940:CDS 35.0%
TGCATGTGGAAAGTTACTTA+CGG + chr5_4:3997631-3997650 Msa0830940:CDS 35.0%
! CTTATTGCATGGGTGAATTT+TGG - chr5_4:3997715-3997734 None:intergenic 35.0%
GTATGTATGTGCTTATTGCA+TGG - chr5_4:3997726-3997745 None:intergenic 35.0%
! CCAAGCATATCTAGTTCATT+TGG - chr5_4:3998118-3998137 None:intergenic 35.0%
CCAAATGAACTAGATATGCT+TGG + chr5_4:3998115-3998134 Msa0830940:CDS 35.0%
!!! AAAAGGCGATACCTTGTTTT+CGG + chr5_4:3998240-3998259 Msa0830940:CDS 35.0%
GAAAACACCAATAACCTGTA+TGG - chr5_4:3998318-3998337 None:intergenic 35.0%
TTGCGTGATTTATTCAACAG+GGG + chr5_4:3998409-3998428 Msa0830940:intron 35.0%
ATTTATTCAACAGGGGACAT+TGG + chr5_4:3998416-3998435 Msa0830940:intron 35.0%
CTTGGCTATAAATATTCTCC+AGG - chr5_4:3998532-3998551 None:intergenic 35.0%
AGACATACAGATTCAACAGA+AGG - chr5_4:3998557-3998576 None:intergenic 35.0%
ACGTGAATTGATGAACTCAT+TGG + chr5_4:3998666-3998685 Msa0830940:intron 35.0%
TGATCGTTTGTCTAATAGAC+AGG + chr5_4:3999044-3999063 Msa0830940:intron 35.0%
TCTACTACATGCAACAAGAA+TGG - chr5_4:3999071-3999090 None:intergenic 35.0%
TGTTTATGAGCTGACACATA+TGG - chr5_4:3999116-3999135 None:intergenic 35.0%
TATTCTTCCTGTCTCAGATA+TGG + chr5_4:3999213-3999232 Msa0830940:intron 35.0%
ATTCTTCCTGTCTCAGATAT+GGG + chr5_4:3999214-3999233 Msa0830940:intron 35.0%
! GGTTTATGGAAACAGTTTTG+AGG + chr5_4:3999235-3999254 Msa0830940:CDS 35.0%
CAAACCAGTACTTGAACATT+GGG + chr5_4:3999286-3999305 Msa0830940:CDS 35.0%
GTTCCATATCAAATGGAACT+GGG - chr5_4:3999899-3999918 None:intergenic 35.0%
TGATAGTATTTGAGCAACTG+AGG - chr5_4:3999957-3999976 None:intergenic 35.0%
TCAGTTGCTCAAATACTATC+AGG + chr5_4:3999956-3999975 Msa0830940:CDS 35.0%
TCAGTGGAAAGAAAATATCC+GGG - chr5_4:4000093-4000112 None:intergenic 35.0%
CTCAGTGGAAAGAAAATATC+CGG - chr5_4:4000094-4000113 None:intergenic 35.0%
TAGTTACTAAACACTCGACA+TGG + chr5_4:4000201-4000220 Msa0830940:intron 35.0%
! ACGTTTCAAAGCCTGTTTTA+TGG + chr5_4:4000375-4000394 Msa0830940:intron 35.0%
CTATTTGTTTGCTCAGAATG+TGG + chr5_4:4000440-4000459 Msa0830940:intron 35.0%
ATGTACAGACAGTAACCAAA+AGG - chr5_4:4000589-4000608 None:intergenic 35.0%
TTTGCAACGAATATTGTCAG+AGG - chr5_4:4000698-4000717 None:intergenic 35.0%
! CACCATTGTTAATTTTGCCA+AGG - chr5_4:4000751-4000770 None:intergenic 35.0%
CGGAGAAAAAAGAACCTTAG+TGG - chr5_4:3989500-3989519 None:intergenic 40.0%
CTATGCATTGGAGATCAACA+AGG - chr5_4:3989691-3989710 None:intergenic 40.0%
!! TAAATGCAGTTAAGTGTCGG+TGG - chr5_4:3989833-3989852 None:intergenic 40.0%
CGATCGATCGATGAGAAAAA+TGG - chr5_4:3989908-3989927 None:intergenic 40.0%
CATTGAGGTTGAAAAAGCGA+AGG + chr5_4:3989955-3989974 Msa0830940:CDS 40.0%
TGAAAAAGCGAAGGAAGCAA+CGG + chr5_4:3989964-3989983 Msa0830940:CDS 40.0%
ACGGAAGATAAACCTTCAAG+AGG + chr5_4:3989983-3990002 Msa0830940:CDS 40.0%
CAACTATCAAGACCAGGAAT+AGG - chr5_4:3990052-3990071 None:intergenic 40.0%
TAATCGCAGATCACGACAAA+TGG + chr5_4:3990531-3990550 Msa0830940:intron 40.0%
! TTTTCTTGCCATAGCTTGAC+CGG + chr5_4:3990863-3990882 Msa0830940:intron 40.0%
AGGTTGAAGTCTATACAGGT+AGG - chr5_4:3991541-3991560 None:intergenic 40.0%
ACCTGTATAGACTTCAACCT+AGG + chr5_4:3991541-3991560 Msa0830940:intron 40.0%
! TCCTAGGTTGAAGTCTATAC+AGG - chr5_4:3991545-3991564 None:intergenic 40.0%
ATCCGATCTCACTATCCTAA+TGG + chr5_4:3991580-3991599 Msa0830940:intron 40.0%
GACCATTAGGATAGTGAGAT+CGG - chr5_4:3991585-3991604 None:intergenic 40.0%
TTTAGGTCTGATAGGTCACA+GGG - chr5_4:3991617-3991636 None:intergenic 40.0%
TGCTAGTTGTTTGTGTTGGA+AGG - chr5_4:3991661-3991680 None:intergenic 40.0%
! AAGGTGCTAGTTGTTTGTGT+TGG - chr5_4:3991665-3991684 None:intergenic 40.0%
! AGCACCTTGTTTCACAACTT+CGG + chr5_4:3991677-3991696 Msa0830940:intron 40.0%
TACACCGAAGTTGTGAAACA+AGG - chr5_4:3991684-3991703 None:intergenic 40.0%
ATCGCCTGTGATACTTGTTT+AGG - chr5_4:3991739-3991758 None:intergenic 40.0%
TATCACAGGCGATACAAGAA+AGG + chr5_4:3991746-3991765 Msa0830940:intron 40.0%
GACGGCTTGAATGAACAATT+AGG + chr5_4:3991860-3991879 Msa0830940:intron 40.0%
CCAAGCTGCTTCAGTATAAA+AGG - chr5_4:3991898-3991917 None:intergenic 40.0%
! CCTTTTATACTGAAGCAGCT+TGG + chr5_4:3991895-3991914 Msa0830940:intron 40.0%
GCTTGGGCTAAATAATTCGT+TGG + chr5_4:3991912-3991931 Msa0830940:intron 40.0%
GATACAATGTTCCAACATCC+TGG - chr5_4:3992208-3992227 None:intergenic 40.0%
TAGGCAACTCTGTAAGATGT+TGG - chr5_4:3992230-3992249 None:intergenic 40.0%
CAAAGTTCCAACATGTGGTT+AGG - chr5_4:3992249-3992268 None:intergenic 40.0%
CTAACCACATGTTGGAACTT+TGG + chr5_4:3992247-3992266 Msa0830940:intron 40.0%
TGGTTCCAACTTACAGAACA+AGG + chr5_4:3992267-3992286 Msa0830940:intron 40.0%
AGACATTTCGGTCTCTACAA+CGG - chr5_4:3992513-3992532 None:intergenic 40.0%
CCAATTGAGTTTAGATCACG+AGG - chr5_4:3992538-3992557 None:intergenic 40.0%
CCTCGTGATCTAAACTCAAT+TGG + chr5_4:3992535-3992554 Msa0830940:intron 40.0%
!!! CATTTCGGTCTCTTTTTTGG+TGG - chr5_4:3992610-3992629 None:intergenic 40.0%
CGATTGCTTGTGTAATGAAG+GGG - chr5_4:3992802-3992821 None:intergenic 40.0%
GCGATTGCTTGTGTAATGAA+GGG - chr5_4:3992803-3992822 None:intergenic 40.0%
!! AATGAGCATTGACGTGCAAT+TGG + chr5_4:3992834-3992853 Msa0830940:intron 40.0%
! CTCTTTGTCACAGATTTTCC+TGG + chr5_4:3992988-3993007 Msa0830940:intron 40.0%
! TTTTCCTGGTGAACTTAAGC+TGG + chr5_4:3993002-3993021 Msa0830940:intron 40.0%
CATAATCCACTCTGCAGAAT+TGG - chr5_4:3993155-3993174 None:intergenic 40.0%
AGAGATTGGGGAACAAAACA+GGG - chr5_4:3993247-3993266 None:intergenic 40.0%
AAGAGATTGGGGAACAAAAC+AGG - chr5_4:3993248-3993267 None:intergenic 40.0%
AAAACAAGACCTTCAATGGG+AGG - chr5_4:3993294-3993313 None:intergenic 40.0%
CCACAAAACAAGACCTTCAA+TGG - chr5_4:3993298-3993317 None:intergenic 40.0%
!!! CCATTGAAGGTCTTGTTTTG+TGG + chr5_4:3993295-3993314 Msa0830940:intron 40.0%
AGGGAAAAAGTTGGACACAT+TGG - chr5_4:3993422-3993441 None:intergenic 40.0%
AGGTTTAGGGAGAAACAAGA+GGG - chr5_4:3993441-3993460 None:intergenic 40.0%
AAGGTTTAGGGAGAAACAAG+AGG - chr5_4:3993442-3993461 None:intergenic 40.0%
AATCTTCGAGGTGCAAAGTT+TGG - chr5_4:3993595-3993614 None:intergenic 40.0%
AGAGTTGGAGAAAATCTTCG+AGG - chr5_4:3993607-3993626 None:intergenic 40.0%
!! CATTGAGTTGATTGCAGAGT+TGG - chr5_4:3993622-3993641 None:intergenic 40.0%
CAACTCTGCAATCAACTCAA+TGG + chr5_4:3993620-3993639 Msa0830940:intron 40.0%
ATGGAATCTTTCCTTCTCCA+AGG + chr5_4:3993639-3993658 Msa0830940:intron 40.0%
! ATTCTAGGAGAGGTAAGTGA+AGG - chr5_4:3993775-3993794 None:intergenic 40.0%
AGCATGTTTGTACACAGTGA+TGG + chr5_4:3994246-3994265 Msa0830940:intron 40.0%
TCGCATAAATTGGCAAGCTT+GGG - chr5_4:3994390-3994409 None:intergenic 40.0%
TTCGCATAAATTGGCAAGCT+TGG - chr5_4:3994391-3994410 None:intergenic 40.0%
AGCCAATTGCACACAGATTA+AGG - chr5_4:3994985-3995004 None:intergenic 40.0%
!!! CGACACTGATTTTGAAACGA+AGG + chr5_4:3995009-3995028 Msa0830940:intron 40.0%
TTATCGGGTCAAATCCACAT+GGG - chr5_4:3995100-3995119 None:intergenic 40.0%
TTTATCGGGTCAAATCCACA+TGG - chr5_4:3995101-3995120 None:intergenic 40.0%
GGATTTGACCCGATAAAAAG+TGG + chr5_4:3995104-3995123 Msa0830940:intron 40.0%
!! ATACTGGTTTGAATGTCCCA+TGG + chr5_4:3995156-3995175 Msa0830940:intron 40.0%
!! AGGTTAGTTTGAATGTCCCA+TGG + chr5_4:3995207-3995226 Msa0830940:intron 40.0%
CCCTTTGCAGCATAAATAGT+TGG + chr5_4:3995909-3995928 Msa0830940:intron 40.0%
CTATTACTTGGACTAACTGC+CGG - chr5_4:3995961-3995980 None:intergenic 40.0%
GCAGTTAGTCCAAGTAATAG+TGG + chr5_4:3995961-3995980 Msa0830940:intron 40.0%
CCACACATTCCACTATTACT+TGG - chr5_4:3995973-3995992 None:intergenic 40.0%
! CCAAGTAATAGTGGAATGTG+TGG + chr5_4:3995970-3995989 Msa0830940:intron 40.0%
TGCTAGCCATACTTGTAATG+AGG - chr5_4:3996146-3996165 None:intergenic 40.0%
ATGTATACTAGCGGAACTAC+TGG + chr5_4:3996305-3996324 Msa0830940:CDS 40.0%
TGGATATCAATACTCCCTTG+GGG - chr5_4:3996334-3996353 None:intergenic 40.0%
TTGTTTACAGTTGACCGAGA+AGG + chr5_4:3996633-3996652 Msa0830940:intron 40.0%
TCTCGCACATACCTTTGATA+GGG + chr5_4:3996678-3996697 Msa0830940:CDS 40.0%
TACCTTTGATAGGGTCATTG+AGG + chr5_4:3996687-3996706 Msa0830940:CDS 40.0%
GAGGAGACATTTATATGGCA+TGG + chr5_4:3996706-3996725 Msa0830940:CDS 40.0%
GAGACATTTATATGGCATGG+TGG + chr5_4:3996709-3996728 Msa0830940:CDS 40.0%
ATATGGCATGGTGGTTCAAT+AGG + chr5_4:3996718-3996737 Msa0830940:CDS 40.0%
!! CATAGTGCAAATGATGGACA+AGG - chr5_4:3996857-3996876 None:intergenic 40.0%
CTTGTCCATCATTTGCACTA+TGG + chr5_4:3996855-3996874 Msa0830940:intron 40.0%
TACACTCTATCAAGTACACG+AGG - chr5_4:3996947-3996966 None:intergenic 40.0%
GTACTTGATAGAGTGTACTC+AGG + chr5_4:3996950-3996969 Msa0830940:CDS 40.0%
TTGATAGAGTGTACTCAGGT+AGG + chr5_4:3996954-3996973 Msa0830940:intron 40.0%
GATTCTCAACTTCTGTATGC+AGG + chr5_4:3997119-3997138 Msa0830940:intron 40.0%
ATTTCTGCGTGCTTTGACAA+AGG - chr5_4:3997269-3997288 None:intergenic 40.0%
! TTTTCTCCTCTTGGCTGATT+TGG + chr5_4:3997530-3997549 Msa0830940:intron 40.0%
TTAGGTGAAGCAAGGTTTAG+GGG + chr5_4:3997566-3997585 Msa0830940:intron 40.0%
CTTTCCACATGCAAAGATAG+AGG - chr5_4:3997624-3997643 None:intergenic 40.0%
GCATGTGGAAAGTTACTTAC+GGG + chr5_4:3997632-3997651 Msa0830940:CDS 40.0%
AGAGCATACCATATCCTTGT+AGG - chr5_4:3997677-3997696 None:intergenic 40.0%
ACTAGATATGCTTGGAACAG+TGG + chr5_4:3998123-3998142 Msa0830940:CDS 40.0%
CTAGATATGCTTGGAACAGT+GGG + chr5_4:3998124-3998143 Msa0830940:CDS 40.0%
CTGGAATCTGTTCCTGAAAT+GGG + chr5_4:3998175-3998194 Msa0830940:CDS 40.0%
!!! AAAGGCGATACCTTGTTTTC+GGG + chr5_4:3998241-3998260 Msa0830940:CDS 40.0%
TTTGTAGTACCCCGAAAACA+AGG - chr5_4:3998254-3998273 None:intergenic 40.0%
! ACAAAAGAGGTTCTGGTTGA+TGG + chr5_4:3998286-3998305 Msa0830940:CDS 40.0%
GATGGTTCCATACAGGTTAT+TGG + chr5_4:3998308-3998327 Msa0830940:intron 40.0%
TTCGCAAGGAGAATATGTTG+CGG + chr5_4:3998499-3998518 Msa0830940:CDS 40.0%
ATATGTTGCGGTTGAAAACC+TGG + chr5_4:3998511-3998530 Msa0830940:CDS 40.0%
CAGATTCAACAGAAGGAACT+TGG - chr5_4:3998550-3998569 None:intergenic 40.0%
AGCTAGGACACTAAAACCAT+CGG - chr5_4:3998591-3998610 None:intergenic 40.0%
AAATATCCCAGCCTAGAGAT+AGG - chr5_4:3998832-3998851 None:intergenic 40.0%
ACAACAGCACATAGGACTAT+GGG - chr5_4:3998963-3998982 None:intergenic 40.0%
! CATAAACCCATATCTGAGAC+AGG - chr5_4:3999223-3999242 None:intergenic 40.0%
CTGTCTCAGATATGGGTTTA+TGG + chr5_4:3999221-3999240 Msa0830940:intron 40.0%
GTTAACAACAGCAACAAGGA+AGG - chr5_4:3999261-3999280 None:intergenic 40.0%
!! TGTTCAAGTACTGGTTTGCT+GGG - chr5_4:3999284-3999303 None:intergenic 40.0%
!! ATGTTCAAGTACTGGTTTGC+TGG - chr5_4:3999285-3999304 None:intergenic 40.0%
GCAAACCAGTACTTGAACAT+TGG + chr5_4:3999285-3999304 Msa0830940:CDS 40.0%
GAACATTGGGCAGAAGAAAA+TGG + chr5_4:3999299-3999318 Msa0830940:CDS 40.0%
! ATTCTCTCTCTGGAGATTCT+AGG + chr5_4:3999339-3999358 Msa0830940:CDS 40.0%
! TTCTCTCTCTGGAGATTCTA+GGG + chr5_4:3999340-3999359 Msa0830940:CDS 40.0%
CTTGAAGAGCTCTCAAAGAT+TGG + chr5_4:3999377-3999396 Msa0830940:CDS 40.0%
AGAGCTCTCAAAGATTGGAA+AGG + chr5_4:3999382-3999401 Msa0830940:CDS 40.0%
TGACCCAGTTCCATTTGATA+TGG + chr5_4:3999893-3999912 Msa0830940:CDS 40.0%
CGTTCCATATCAAATGGAAC+TGG - chr5_4:3999900-3999919 None:intergenic 40.0%
AGGTCACGTTCCATATCAAA+TGG - chr5_4:3999906-3999925 None:intergenic 40.0%
TCTTGTATGTCGGAGTGATA+AGG - chr5_4:3999926-3999945 None:intergenic 40.0%
! GTTTTCAGTTATACGCTCAG+TGG - chr5_4:4000109-4000128 None:intergenic 40.0%
CTGAGCGTATAACTGAAAAC+AGG + chr5_4:4000109-4000128 Msa0830940:intron 40.0%
AAGTGCAGTTGAAAGTGAAG+TGG - chr5_4:4000339-4000358 None:intergenic 40.0%
GTCGATGACATGTACAAAAG+TGG + chr5_4:4000462-4000481 Msa0830940:CDS 40.0%
CAACTCCAAATGCATTTCTC+AGG - chr5_4:4000502-4000521 None:intergenic 40.0%
! CTGAGAAATGCATTTGGAGT+TGG + chr5_4:4000500-4000519 Msa0830940:exon 40.0%
GTATCTTTCACAGTTGAGTG+AGG - chr5_4:4000641-4000660 None:intergenic 40.0%
GAGAGAGAGAAGAGCTATCA+TGG - chr5_4:3989588-3989607 None:intergenic 45.0%
ACTAGATCACGTTCTAGCAG+TGG - chr5_4:3989640-3989659 None:intergenic 45.0%
ACTGCTAGAACGTGATCTAG+TGG + chr5_4:3989639-3989658 Msa0830940:five_prime_UTR 45.0%
TGCATTGGAGATCAACAAGG+TGG - chr5_4:3989688-3989707 None:intergenic 45.0%
! GAAAAGTCGATGGAGTGTCT+GGG - chr5_4:3989784-3989803 None:intergenic 45.0%
! TGAAAAGTCGATGGAGTGTC+TGG - chr5_4:3989785-3989804 None:intergenic 45.0%
ATCGATCGATCGTTTAGCCA+TGG + chr5_4:3989916-3989935 Msa0830940:exon 45.0%
! GATGAATCTTTTCTGCGCCA+TGG - chr5_4:3989936-3989955 None:intergenic 45.0%
CGTAGCATCTTCGCTAAAGA+TGG + chr5_4:3990016-3990035 Msa0830940:CDS 45.0%
CTATCAAGACCAGGAATAGG+AGG - chr5_4:3990049-3990068 None:intergenic 45.0%
!! TTCCTGGTCTTGATAGTTGC+TGG + chr5_4:3990053-3990072 Msa0830940:CDS 45.0%
!! TCCTGGTCTTGATAGTTGCT+GGG + chr5_4:3990054-3990073 Msa0830940:CDS 45.0%
TGGACGGGAAGGTAAAGTAT+TGG + chr5_4:3990809-3990828 Msa0830940:intron 45.0%
AACAGCATGGCAAGTACAAG+TGG + chr5_4:3990933-3990952 Msa0830940:intron 45.0%
AGTCTATACAGGTAGGTCCT+AGG - chr5_4:3991534-3991553 None:intergenic 45.0%
TCTCAGATCTAGGAGTTCCT+AGG - chr5_4:3991561-3991580 None:intergenic 45.0%
TGAGATCGGATCTCAGATCT+AGG - chr5_4:3991571-3991590 None:intergenic 45.0%
TTAGGTCTGATAGGTCACAG+GGG - chr5_4:3991616-3991635 None:intergenic 45.0%
GTTTAGGTCTGATAGGTCAC+AGG - chr5_4:3991618-3991637 None:intergenic 45.0%
GTACATATAGGCATGAACCC+AGG + chr5_4:3992168-3992187 Msa0830940:intron 45.0%
AATGTTCCAACATCCTGGCA+CGG - chr5_4:3992203-3992222 None:intergenic 45.0%
AGAGTTGCCTAACCACATGT+TGG + chr5_4:3992239-3992258 Msa0830940:intron 45.0%
GGAACCAAAGTTCCAACATG+TGG - chr5_4:3992254-3992273 None:intergenic 45.0%
GATCACGAGGACAGACATTT+CGG - chr5_4:3992525-3992544 None:intergenic 45.0%
!!! TTCGGTCTCTTTTTTGGTGG+TGG - chr5_4:3992607-3992626 None:intergenic 45.0%
GTGTAATGAAGGGGTAGCTT+TGG - chr5_4:3992793-3992812 None:intergenic 45.0%
GGCGATTGCTTGTGTAATGA+AGG - chr5_4:3992804-3992823 None:intergenic 45.0%
TCAATGCTCATTGTAGCCCA+GGG - chr5_4:3992826-3992845 None:intergenic 45.0%
TTTGCCAGCTTAAGTTCACC+AGG - chr5_4:3993009-3993028 None:intergenic 45.0%
GGTTTGCAGGGTGTAAAATG+TGG + chr5_4:3993118-3993137 Msa0830940:intron 45.0%
!! TGCAGAGTGGATTATGAGCA+TGG + chr5_4:3993159-3993178 Msa0830940:CDS 45.0%
!! AGAGTGGATTATGAGCATGG+AGG + chr5_4:3993162-3993181 Msa0830940:CDS 45.0%
TGTGGTTTCAATCCCTTACG+AGG + chr5_4:3993313-3993332 Msa0830940:intron 45.0%
AATTTCCTGCTGCCTCGTAA+GGG - chr5_4:3993328-3993347 None:intergenic 45.0%
TAATTTCCTGCTGCCTCGTA+AGG - chr5_4:3993329-3993348 None:intergenic 45.0%
TTACGAGGCAGCAGGAAATT+AGG + chr5_4:3993328-3993347 Msa0830940:intron 45.0%
AGGTTTCAATCCCATCTGTG+AGG + chr5_4:3993348-3993367 Msa0830940:intron 45.0%
! GTTGGACACATTGGATTGGA+CGG - chr5_4:3993413-3993432 None:intergenic 45.0%
GAGGCTTTGCAACCAGTTAT+AGG + chr5_4:3993480-3993499 Msa0830940:intron 45.0%
AGTACAAATCGGATCCTGGA+AGG - chr5_4:3993682-3993701 None:intergenic 45.0%
! GAAGAGTACAAATCGGATCC+TGG - chr5_4:3993686-3993705 None:intergenic 45.0%
TGGTGTAGGAACCGGTTAAT+AGG - chr5_4:3993732-3993751 None:intergenic 45.0%
CAGATGTATGGTGTAGGAAC+CGG - chr5_4:3993740-3993759 None:intergenic 45.0%
!! TGCTTTCATGGTGCTGTTAG+TGG + chr5_4:3994069-3994088 Msa0830940:intron 45.0%
TTATAGAAGGTGACCAGGGA+TGG - chr5_4:3994095-3994114 None:intergenic 45.0%
CGAGTGGAAGAAGCTAGTAA+AGG - chr5_4:3994122-3994141 None:intergenic 45.0%
GATGGTGCTTTGACTGCAAT+TGG + chr5_4:3994264-3994283 Msa0830940:intron 45.0%
CAAGTGACAGATTTCGGTGA+AGG - chr5_4:3994676-3994695 None:intergenic 45.0%
!! AAACGAAGGGAGTACTATGC+AGG + chr5_4:3995023-3995042 Msa0830940:intron 45.0%
AATTAGTGGGGCTCACACTT+TGG + chr5_4:3995047-3995066 Msa0830940:intron 45.0%
! ATAAAATGGTGGGACCCATG+TGG + chr5_4:3995083-3995102 Msa0830940:intron 45.0%
ATGCAATTGAGACCTCTGCA+TGG - chr5_4:3995404-3995423 None:intergenic 45.0%
AGCAATTGTGAGCTTCGGAA+AGG + chr5_4:3995702-3995721 Msa0830940:intron 45.0%
AAACTCTGACTTTCACCCTG+TGG - chr5_4:3996245-3996264 None:intergenic 45.0%
! CTATCAAAGGTATGTGCGAG+AGG - chr5_4:3996679-3996698 None:intergenic 45.0%
CTCTCGCACATACCTTTGAT+AGG + chr5_4:3996677-3996696 Msa0830940:CDS 45.0%
CTCCTCAATGACCCTATCAA+AGG - chr5_4:3996692-3996711 None:intergenic 45.0%
ATGGTGGTTCAATAGGCTTC+TGG + chr5_4:3996725-3996744 Msa0830940:CDS 45.0%
TGCAGCCATAGTGCAAATGA+TGG - chr5_4:3996863-3996882 None:intergenic 45.0%
ATCATTTGCACTATGGCTGC+AGG + chr5_4:3996862-3996881 Msa0830940:intron 45.0%
GGTACCGCACAGAAAAAAGT+TGG - chr5_4:3996926-3996945 None:intergenic 45.0%
GCAAAACCAAATCAGCCAAG+AGG - chr5_4:3997539-3997558 None:intergenic 45.0%
TAGGTGAAGCAAGGTTTAGG+GGG + chr5_4:3997567-3997586 Msa0830940:intron 45.0%
AGCACCTCTATCTTTGCATG+TGG + chr5_4:3997617-3997636 Msa0830940:CDS 45.0%
TGTGGAAAGTTACTTACGGG+TGG + chr5_4:3997635-3997654 Msa0830940:CDS 45.0%
ACTTGTGCTCATGTCCTACA+AGG + chr5_4:3997660-3997679 Msa0830940:CDS 45.0%
GCTCATGTCCTACAAGGATA+TGG + chr5_4:3997666-3997685 Msa0830940:CDS 45.0%
CCATTTCAGGAACAGATTCC+AGG - chr5_4:3998177-3998196 None:intergenic 45.0%
CCTGGAATCTGTTCCTGAAA+TGG + chr5_4:3998174-3998193 Msa0830940:CDS 45.0%
!!! AAGGCGATACCTTGTTTTCG+GGG + chr5_4:3998242-3998261 Msa0830940:CDS 45.0%
ACGTGAAGACCTCACAAAAG+AGG + chr5_4:3998273-3998292 Msa0830940:CDS 45.0%
AGACCTCACAAAAGAGGTTC+TGG + chr5_4:3998279-3998298 Msa0830940:CDS 45.0%
! CAACCAGAACCTCTTTTGTG+AGG - chr5_4:3998285-3998304 None:intergenic 45.0%
!! AAGAGGTTCTGGTTGATGGA+TGG + chr5_4:3998290-3998309 Msa0830940:CDS 45.0%
! GTTGATGGATGGTTCCATAC+AGG + chr5_4:3998301-3998320 Msa0830940:CDS 45.0%
ATTGGAGAGTGGCAACCTAA+TGG + chr5_4:3998434-3998453 Msa0830940:CDS 45.0%
GGACACTAAAACCATCGGAA+GGG - chr5_4:3998586-3998605 None:intergenic 45.0%
AGGACACTAAAACCATCGGA+AGG - chr5_4:3998587-3998606 None:intergenic 45.0%
TATAGAAACCGTGCCCTTGA+TGG + chr5_4:3998702-3998721 Msa0830940:intron 45.0%
ATAGAAACCGTGCCCTTGAT+GGG + chr5_4:3998703-3998722 Msa0830940:intron 45.0%
ATTTGTCCCAAGCCCATCAA+GGG - chr5_4:3998718-3998737 None:intergenic 45.0%
!! TTGATGGGCTTGGGACAAAT+GGG + chr5_4:3998718-3998737 Msa0830940:intron 45.0%
AGACTGATACGCCTATCTCT+AGG + chr5_4:3998818-3998837 Msa0830940:intron 45.0%
CACAACAGCACATAGGACTA+TGG - chr5_4:3998964-3998983 None:intergenic 45.0%
ATCTGTGCACAACAGCACAT+AGG - chr5_4:3998971-3998990 None:intergenic 45.0%
GCACAGATTGTGGTCCATAT+TGG + chr5_4:3998983-3999002 Msa0830940:intron 45.0%
TGGGGTTAACAACAGCAACA+AGG - chr5_4:3999265-3999284 None:intergenic 45.0%
!! GTTCAAGTACTGGTTTGCTG+GGG - chr5_4:3999283-3999302 None:intergenic 45.0%
TCTGCCCAATGTTCAAGTAC+TGG - chr5_4:3999293-3999312 None:intergenic 45.0%
GTGGACTTCAATTCTCTCTC+TGG + chr5_4:3999329-3999348 Msa0830940:CDS 45.0%
CAAATGGAACTGGGTCAAGA+TGG - chr5_4:3999890-3999909 None:intergenic 45.0%
CTCCGACATACAAGAAGAAG+AGG + chr5_4:3999931-3999950 Msa0830940:CDS 45.0%
GGCCTCTTCTTCTTGTATGT+CGG - chr5_4:3999936-3999955 None:intergenic 45.0%
AAATGCATTTCTCAGGCACG+GGG - chr5_4:4000495-4000514 None:intergenic 45.0%
CAAATGCATTTCTCAGGCAC+GGG - chr5_4:4000496-4000515 None:intergenic 45.0%
CCAAATGCATTTCTCAGGCA+CGG - chr5_4:4000497-4000516 None:intergenic 45.0%
!! AACTTTATATATTAAATTTA+AGG + chr5_4:3991257-3991276 Msa0830940:intron 5.0%
!! ACTTTATATATTAAATTTAA+GGG + chr5_4:3991258-3991277 Msa0830940:intron 5.0%
!!! AAATTTTTATTTTTATTGAA+TGG - chr5_4:3992762-3992781 None:intergenic 5.0%
!!! TTCAATAAAAATAAAAATTT+TGG + chr5_4:3992762-3992781 Msa0830940:intron 5.0%
!!! TCAATAAAAATAAAAATTTT+GGG + chr5_4:3992763-3992782 Msa0830940:intron 5.0%
CTAGCAGTGGATGCATGCAT+TGG - chr5_4:3989627-3989646 None:intergenic 50.0%
CAACAAGGTGGATGACACTG+TGG - chr5_4:3989676-3989695 None:intergenic 50.0%
CACTAAGAAAGAACAGGCGC+CGG + chr5_4:3989742-3989761 Msa0830940:five_prime_UTR 50.0%
! GGTTTTCCTCCTCCTATTCC+TGG + chr5_4:3990037-3990056 Msa0830940:CDS 50.0%
TCAAGACCAGGAATAGGAGG+AGG - chr5_4:3990046-3990065 None:intergenic 50.0%
TCCCAGCAACTATCAAGACC+AGG - chr5_4:3990058-3990077 None:intergenic 50.0%
TCGCAGATCACGACAAATGG+AGG + chr5_4:3990534-3990553 Msa0830940:intron 50.0%
ATCTCTCGGCTACCAAGCAT+AGG - chr5_4:3990787-3990806 None:intergenic 50.0%
ATCCATGACCGGTCAAGCTA+TGG - chr5_4:3990874-3990893 None:intergenic 50.0%
GGAAATTCTATCCGCAGCTG+TGG + chr5_4:3990995-3991014 Msa0830940:CDS 50.0%
TCTATCCGCAGCTGTGGTTA+TGG + chr5_4:3991001-3991020 Msa0830940:CDS 50.0%
CTTCTCCATAACCACAGCTG+CGG - chr5_4:3991009-3991028 None:intergenic 50.0%
TAGGTGAGTTGTGCCGAACT+GGG - chr5_4:3991442-3991461 None:intergenic 50.0%
GGCACAACTCACCTACATCT+GGG + chr5_4:3991447-3991466 Msa0830940:intron 50.0%
GCACAACTCACCTACATCTG+GGG + chr5_4:3991448-3991467 Msa0830940:intron 50.0%
CACAACTCACCTACATCTGG+GGG + chr5_4:3991449-3991468 Msa0830940:intron 50.0%
! GGCGATACAAGAAAGGCACA+TGG + chr5_4:3991753-3991772 Msa0830940:intron 50.0%
CGCGCGCCCTTTATTGTTTA+AGG - chr5_4:3992149-3992168 None:intergenic 50.0%
! TAAAGGGCGCGCGTACATAT+AGG + chr5_4:3992156-3992175 Msa0830940:intron 50.0%
!!! TCTCTTTTTTGGTGGTGGCC+GGG - chr5_4:3992602-3992621 None:intergenic 50.0%
!!! GTCTCTTTTTTGGTGGTGGC+CGG - chr5_4:3992603-3992622 None:intergenic 50.0%
ATTACACAAGCAATCGCCCC+TGG + chr5_4:3992806-3992825 Msa0830940:intron 50.0%
TTACACAAGCAATCGCCCCT+GGG + chr5_4:3992807-3992826 Msa0830940:intron 50.0%
CAATGCTCATTGTAGCCCAG+GGG - chr5_4:3992825-3992844 None:intergenic 50.0%
GTCAATGCTCATTGTAGCCC+AGG - chr5_4:3992827-3992846 None:intergenic 50.0%
! ATGGTGCCAATTCTGCAGAG+TGG + chr5_4:3993146-3993165 Msa0830940:CDS 50.0%
AGGCGGCAAGAAAGAGATTG+GGG - chr5_4:3993259-3993278 None:intergenic 50.0%
CAGGCGGCAAGAAAGAGATT+GGG - chr5_4:3993260-3993279 None:intergenic 50.0%
TCAGGCGGCAAGAAAGAGAT+TGG - chr5_4:3993261-3993280 None:intergenic 50.0%
! ATGGGAGGCATGAGTCAATC+AGG - chr5_4:3993279-3993298 None:intergenic 50.0%
TGACTCATGCCTCCCATTGA+AGG + chr5_4:3993282-3993301 Msa0830940:intron 50.0%
TTTCCTGCTGCCTCACAGAT+GGG - chr5_4:3993361-3993380 None:intergenic 50.0%
ATTTCCTGCTGCCTCACAGA+TGG - chr5_4:3993362-3993381 None:intergenic 50.0%
! ATTGGATTGGACGGACTCAG+CGG - chr5_4:3993404-3993423 None:intergenic 50.0%
CAAAGTTGGAGCCTTGGAGA+AGG - chr5_4:3993653-3993672 None:intergenic 50.0%
TGTGGACAAAGTTGGAGCCT+TGG - chr5_4:3993659-3993678 None:intergenic 50.0%
! CTGGAAGGTGTGGACAAAGT+TGG - chr5_4:3993667-3993686 None:intergenic 50.0%
CAACTTTGTCCACACCTTCC+AGG + chr5_4:3993665-3993684 Msa0830940:intron 50.0%
AAATCGGATCCTGGAAGGTG+TGG - chr5_4:3993677-3993696 None:intergenic 50.0%
TTGCAGGCTTGCAATGCTCA+TGG + chr5_4:3994175-3994194 Msa0830940:intron 50.0%
GTATCACTATCTCGGTCCAC+CGG + chr5_4:3995939-3995958 Msa0830940:intron 50.0%
TTACTTGGACTAACTGCCGG+TGG - chr5_4:3995958-3995977 None:intergenic 50.0%
! CAAAGGTATGTGCGAGAGGA+AGG - chr5_4:3996675-3996694 None:intergenic 50.0%
GGGTGGCAGCTCAGAAAAAT+AGG - chr5_4:3997069-3997088 None:intergenic 50.0%
!! TTTCTAGCTGGGAAAAGGGG+TGG - chr5_4:3997086-3997105 None:intergenic 50.0%
GAAGTGGAGATGCTACTGCA+TGG - chr5_4:3997432-3997451 None:intergenic 50.0%
AGGTCTGACTGAAACCTGTG+CGG + chr5_4:3998075-3998094 Msa0830940:intron 50.0%
GCATCCACATTTGGTACAGG+AGG - chr5_4:3998151-3998170 None:intergenic 50.0%
CACGCATCCACATTTGGTAC+AGG - chr5_4:3998154-3998173 None:intergenic 50.0%
!! AGGGCATCGTAACCCATTTC+AGG - chr5_4:3998190-3998209 None:intergenic 50.0%
! TCCTCTTGGTGTGCTTGCAA+GGG - chr5_4:3998209-3998228 None:intergenic 50.0%
CATTTGTCCCAAGCCCATCA+AGG - chr5_4:3998719-3998738 None:intergenic 50.0%
!! CTTGATGGGCTTGGGACAAA+TGG + chr5_4:3998717-3998736 Msa0830940:intron 50.0%
!! TGATGGGCTTGGGACAAATG+GGG + chr5_4:3998719-3998738 Msa0830940:intron 50.0%
TGATACGCCTATCTCTAGGC+TGG + chr5_4:3998822-3998841 Msa0830940:intron 50.0%
GATACGCCTATCTCTAGGCT+GGG + chr5_4:3998823-3998842 Msa0830940:intron 50.0%
GGGCAACATACACATGCTAC+TGG - chr5_4:3998943-3998962 None:intergenic 50.0%
! GTGCTGTTGTGCACAGATTG+TGG + chr5_4:3998973-3998992 Msa0830940:intron 50.0%
CCGTGCCTGAGAAATGCATT+TGG + chr5_4:4000494-4000513 Msa0830940:exon 50.0%
! GGGTAGGGTGTTAGCATCTC+CGG - chr5_4:3989764-3989783 None:intergenic 55.0%
! GTCGATGGAGTGTCTGGGTA+GGG - chr5_4:3989779-3989798 None:intergenic 55.0%
! AGTCGATGGAGTGTCTGGGT+AGG - chr5_4:3989780-3989799 None:intergenic 55.0%
CGATACGCAGGTCCTCTTGA+AGG - chr5_4:3989998-3990017 None:intergenic 55.0%
GCGAAGATGCTACGATACGC+AGG - chr5_4:3990010-3990029 None:intergenic 55.0%
! GCTTGGTAGCCGAGAGATTG+TGG + chr5_4:3990789-3990808 Msa0830940:CDS 55.0%
GGTAGCCGAGAGATTGTGGA+CGG + chr5_4:3990793-3990812 Msa0830940:CDS 55.0%
GTAGCCGAGAGATTGTGGAC+GGG + chr5_4:3990794-3990813 Msa0830940:CDS 55.0%
CCTTCCCGTCCACAATCTCT+CGG - chr5_4:3990801-3990820 None:intergenic 55.0%
TGCCATAGCTTGACCGGTCA+TGG + chr5_4:3990869-3990888 Msa0830940:intron 55.0%
GTAGGTGAGTTGTGCCGAAC+TGG - chr5_4:3991443-3991462 None:intergenic 55.0%
CGGCACAACTCACCTACATC+TGG + chr5_4:3991446-3991465 Msa0830940:intron 55.0%
AGGGGCTGTGACTGACCATT+AGG - chr5_4:3991598-3991617 None:intergenic 55.0%
GGCTTCAGCACACTGCAGAT+TGG + chr5_4:3991934-3991953 Msa0830940:intron 55.0%
ACTGAACCGTGCCAGGATGT+TGG + chr5_4:3992194-3992213 Msa0830940:intron 55.0%
AAGGTTCGGGGTTCAAACCC+CGG + chr5_4:3992581-3992600 Msa0830940:intron 55.0%
!!! CTCTTTTTTGGTGGTGGCCG+GGG - chr5_4:3992601-3992620 None:intergenic 55.0%
! GGAGGCATGAGTCAATCAGG+CGG - chr5_4:3993276-3993295 None:intergenic 55.0%
TCAATCCCTTACGAGGCAGC+AGG + chr5_4:3993320-3993339 Msa0830940:intron 55.0%
AATCCCATCTGTGAGGCAGC+AGG + chr5_4:3993355-3993374 Msa0830940:intron 55.0%
AGGGGACTCAGAGCAATTGC+AGG - chr5_4:3995893-3995912 None:intergenic 55.0%
GGAACTACTGGTGACCCCAA+GGG + chr5_4:3996317-3996336 Msa0830940:CDS 55.0%
GGTTCAATAGGCTTCTGGCG+CGG + chr5_4:3996730-3996749 Msa0830940:CDS 55.0%
GTTCAATAGGCTTCTGGCGC+GGG + chr5_4:3996731-3996750 Msa0830940:CDS 55.0%
TTCAATAGGCTTCTGGCGCG+GGG + chr5_4:3996732-3996751 Msa0830940:CDS 55.0%
CATTGCTGTCAAACTGCGGC+TGG - chr5_4:3997508-3997527 None:intergenic 55.0%
GGTCTGACTGAAACCTGTGC+GGG + chr5_4:3998076-3998095 Msa0830940:intron 55.0%
TGAGACAAACGTTCCCGCAC+AGG - chr5_4:3998092-3998111 None:intergenic 55.0%
GGGTCCTCCTGTACCAAATG+TGG + chr5_4:3998144-3998163 Msa0830940:CDS 55.0%
ACCAAATGTGGATGCGTGCC+TGG + chr5_4:3998156-3998175 Msa0830940:CDS 55.0%
TCCAGGCACGCATCCACATT+TGG - chr5_4:3998160-3998179 None:intergenic 55.0%
! CTCCTCTTGGTGTGCTTGCA+AGG - chr5_4:3998210-3998229 None:intergenic 55.0%
CAACAGGGGACATTGGAGAG+TGG + chr5_4:3998423-3998442 Msa0830940:intron 55.0%
TGTCTTGAGAGCCCTTCCGA+TGG + chr5_4:3998572-3998591 Msa0830940:intron 55.0%
CCGAGAGATTGTGGACGGGA+AGG + chr5_4:3990798-3990817 Msa0830940:CDS 60.0%
GGTAGCTAGCCCCCAGATGT+AGG - chr5_4:3991461-3991480 None:intergenic 60.0%
TGGCACGGTTCAGTGTGCCT+GGG - chr5_4:3992188-3992207 None:intergenic 60.0%
! GTGCTGTTAGTGGCCATCCC+TGG + chr5_4:3994079-3994098 Msa0830940:intron 60.0%
CGGAACTACTGGTGACCCCA+AGG + chr5_4:3996316-3996335 Msa0830940:CDS 60.0%
CCGCTTCACCCCAGCTAAGA+GGG - chr5_4:3996372-3996391 None:intergenic 60.0%
CCCTCTTAGCTGGGGTGAAG+CGG + chr5_4:3996369-3996388 Msa0830940:CDS 60.0%
AGCTGGGGTGAAGCGGCTAT+TGG + chr5_4:3996376-3996395 Msa0830940:CDS 60.0%
GCCCTTGCAAGCACACCAAG+AGG + chr5_4:3998205-3998224 Msa0830940:CDS 60.0%
!! AACCGTGCCCTTGATGGGCT+TGG + chr5_4:3998708-3998727 Msa0830940:intron 60.0%
!! ACCGTGCCCTTGATGGGCTT+GGG + chr5_4:3998709-3998728 Msa0830940:intron 60.0%
TCCCAAGCCCATCAAGGGCA+CGG - chr5_4:3998713-3998732 None:intergenic 60.0%
CTGGCACGGTTCAGTGTGCC+TGG - chr5_4:3992189-3992208 None:intergenic 65.0%
CAGGCACACTGAACCGTGCC+AGG + chr5_4:3992187-3992206 Msa0830940:intron 65.0%
! GGATTGGACGGACTCAGCGG+AGG - chr5_4:3993401-3993420 None:intergenic 65.0%
GCCGCTTCACCCCAGCTAAG+AGG - chr5_4:3996373-3996392 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 3989452 4000809 3989452 ID=Msa0830940;Name=Msa0830940
chr5_4 mRNA 3989452 4000809 3989452 ID=Msa0830940-mRNA-1;Parent=Msa0830940;Name=Msa0830940-mRNA-1;_AED=0.16;_eAED=0.16;_QI=483|0.87|0.94|1|1|1|17|306|629
chr5_4 exon 3989452 3990086 3989452 ID=Msa0830940-mRNA-1:exon:1581;Parent=Msa0830940-mRNA-1
chr5_4 exon 3990756 3990819 3990756 ID=Msa0830940-mRNA-1:exon:1582;Parent=Msa0830940-mRNA-1
chr5_4 exon 3990938 3991027 3990938 ID=Msa0830940-mRNA-1:exon:1583;Parent=Msa0830940-mRNA-1
chr5_4 exon 3993127 3993183 3993127 ID=Msa0830940-mRNA-1:exon:1584;Parent=Msa0830940-mRNA-1
chr5_4 exon 3994181 3994229 3994181 ID=Msa0830940-mRNA-1:exon:1585;Parent=Msa0830940-mRNA-1
chr5_4 exon 3995704 3995816 3995704 ID=Msa0830940-mRNA-1:exon:1586;Parent=Msa0830940-mRNA-1
chr5_4 exon 3996248 3996415 3996248 ID=Msa0830940-mRNA-1:exon:1587;Parent=Msa0830940-mRNA-1
chr5_4 exon 3996643 3996753 3996643 ID=Msa0830940-mRNA-1:exon:1588;Parent=Msa0830940-mRNA-1
chr5_4 exon 3996884 3996971 3996884 ID=Msa0830940-mRNA-1:exon:1589;Parent=Msa0830940-mRNA-1
chr5_4 exon 3997141 3997207 3997141 ID=Msa0830940-mRNA-1:exon:1590;Parent=Msa0830940-mRNA-1
chr5_4 exon 3997399 3997474 3997399 ID=Msa0830940-mRNA-1:exon:1591;Parent=Msa0830940-mRNA-1
chr5_4 exon 3997570 3997687 3997570 ID=Msa0830940-mRNA-1:exon:1592;Parent=Msa0830940-mRNA-1
chr5_4 exon 3998077 3998322 3998077 ID=Msa0830940-mRNA-1:exon:1593;Parent=Msa0830940-mRNA-1
chr5_4 exon 3998429 3998568 3998429 ID=Msa0830940-mRNA-1:exon:1594;Parent=Msa0830940-mRNA-1
chr5_4 exon 3999230 3999412 3999230 ID=Msa0830940-mRNA-1:exon:1595;Parent=Msa0830940-mRNA-1
chr5_4 exon 3999858 3999977 3999858 ID=Msa0830940-mRNA-1:exon:1596;Parent=Msa0830940-mRNA-1
chr5_4 exon 4000456 4000809 4000456 ID=Msa0830940-mRNA-1:exon:1597;Parent=Msa0830940-mRNA-1
chr5_4 five_prime_UTR 3989452 3989934 3989452 ID=Msa0830940-mRNA-1:five_prime_utr;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3989935 3990086 3989935 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3990756 3990819 3990756 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3990938 3991027 3990938 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3993127 3993183 3993127 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3994181 3994229 3994181 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3995704 3995816 3995704 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3996248 3996415 3996248 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3996643 3996753 3996643 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3996884 3996971 3996884 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3997141 3997207 3997141 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3997399 3997474 3997399 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3997570 3997687 3997570 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3998077 3998322 3998077 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3998429 3998568 3998429 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3999230 3999412 3999230 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 3999858 3999977 3999858 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 CDS 4000456 4000503 4000456 ID=Msa0830940-mRNA-1:cds;Parent=Msa0830940-mRNA-1
chr5_4 three_prime_UTR 4000504 4000809 4000504 ID=Msa0830940-mRNA-1:three_prime_utr;Parent=Msa0830940-mRNA-1
Gene Sequence

>Msa0830940

ATGGCGCAGAAAAGATTCATCATTGAGGTTGAAAAAGCGAAGGAAGCAACGGAAGATAAACCTTCAAGAGGACCTGCGTATCGTAGCATCTTCGCTAAAGATGGTTTTCCTCCTCCTATTCCTGGTCTTGATAGTTGCTGGGATGTTTTTCGATTGTCCGTTGAGAAATATCCAAATAATCCTATGCTTGGTAGCCGAGAGATTGTGGACGGGAAGCATGGCAAGTACAAGTGGCAAACTTACAAAGAAGTATATGACATGGTGATCAAAGTCGGAAATTCTATCCGCAGCTGTGGTTATGGAGAAGGTGTAAAATGTGGTATTTATGGTGCCAATTCTGCAGAGTGGATTATGAGCATGGAGGCTTGCAATGCTCATGGACTTCATTGCGTTCCTTTATATGATACTTTAGCAATTGTGAGCTTCGGAAAGGTTACCCCTGAACAAAAGCAAGAAGTTGAAAAGCTTGGATTGGCAATATATTCATGGACTGAATTTTTACAATTGGCGAGTTATTCATTTCATGGTGAAAGTCAGAGTTTTGATTTACCTGTAAAGAAAAGAAGCGATATCTGTACAATAATGTATACTAGCGGAACTACTGGTGACCCCAAGGGAGTATTGATATCCAATGAGAATATTATTACCCTCTTAGCTGGGGTGAAGCGGCTATTGGAGAATGTCAATGATAAATTGACCGAGAAGGATGTGTACTTATCATACCTTCCTCTCGCACATACCTTTGATAGGGTCATTGAGGAGACATTTATATGGCATGGTGGTTCAATAGGCTTCTGGCGCGGGGATGTTAAGTTGTTAATTGAAGATCTCGGGGAGCTAAAACCAACTTTTTTCTGTGCGGTACCTCGTGTACTTGATAGAGTGTACTCAGGTTTGACACAGAAAATTTCTTCTGGAGGCTTCCTGAAGAAGACATTATTCAACTTTGCTTATTCATATAAGTTGAATAACATGAAGAAAGGACAAAACCATGCAGTAGCATCTCCACTTCTTGACAAAATTGTGTTCGATAAGGTGAAGCAAGGTTTAGGGGGTAGTGTACGTCTTATTTTGTCTGGAGCAGCACCTCTATCTTTGCATGTGGAAAGTTACTTACGGGTGGTGACTTGTGCTCATGTCCTACAAGGATATGGTCTGACTGAAACCTGTGCGGGAACGTTTGTCTCATTACCAAATGAACTAGATATGCTTGGAACAGTGGGTCCTCCTGTACCAAATGTGGATGCGTGCCTGGAATCTGTTCCTGAAATGGGTTACGATGCCCTTGCAAGCACACCAAGAGGAGAAATTTGTTTAAAAGGCGATACCTTGTTTTCGGGGTACTACAAACGTGAAGACCTCACAAAAGAGGTTCTGGTTGATGGATGGTTCCATACAGGGGACATTGGAGAGTGGCAACCTAATGGAAGTATGAAGATTATTGATCGGAAGAAGAATATATTCAAGCTTTCGCAAGGAGAATATGTTGCGGTTGAAAACCTGGAGAATATTTATAGCCAAGTTCCTTCTGTTGAATCTATATGGGTTTATGGAAACAGTTTTGAGGCCTTCCTTGTTGCTGTTGTTAACCCCAGCAAACCAGTACTTGAACATTGGGCAGAAGAAAATGGTATATCTGTGGACTTCAATTCTCTCTCTGGAGATTCTAGGGCAAAAAGTTACATACTTGAAGAGCTCTCAAAGATTGGAAAGGAAAAGAAGTTGAAAGGATTTGAGTTCATAAAAGCGGTCCATCTTGACCCAGTTCCATTTGATATGGAACGTGACCTTATCACTCCGACATACAAGAAGAAGAGGCCTCAGTTGCTCAAATACTATCAGAATGTGGTCGATGACATGTACAAAAGTGGAAATAAACCCCGTGCCTGA
Protein sequence

>Msa0830940

MAQKRFIIEVEKAKEATEDKPSRGPAYRSIFAKDGFPPPIPGLDSCWDVFRLSVEKYPNNPMLGSREIVDGKHGKYKWQTYKEVYDMVIKVGNSIRSCGYGEGVKCGIYGANSAEWIMSMEACNAHGLHCVPLYDTLAIVSFGKVTPEQKQEVEKLGLAIYSWTEFLQLASYSFHGESQSFDLPVKKRSDICTIMYTSGTTGDPKGVLISNENIITLLAGVKRLLENVNDKLTEKDVYLSYLPLAHTFDRVIEETFIWHGGSIGFWRGDVKLLIEDLGELKPTFFCAVPRVLDRVYSGLTQKISSGGFLKKTLFNFAYSYKLNNMKKGQNHAVASPLLDKIVFDKVKQGLGGSVRLILSGAAPLSLHVESYLRVVTCAHVLQGYGLTETCAGTFVSLPNELDMLGTVGPPVPNVDACLESVPEMGYDALASTPRGEICLKGDTLFSGYYKREDLTKEVLVDGWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYSQVPSVESIWVYGNSFEAFLVAVVNPSKPVLEHWAEENGISVDFNSLSGDSRAKSYILEELSKIGKEKKLKGFEFIKAVHLDPVPFDMERDLITPTYKKKRPQLLKYYQNVVDDMYKSGNKPRA*