AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0832670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0832670 MtrunA17_Chr5g0397841 87.731 432 52 1 1 432 46 476 0.0 762
Msa0832670 MtrunA17_Chr7g0238631 60.625 160 60 1 6 165 57 213 3.47e-62 211
Msa0832670 MtrunA17_Chr3g0139671 60.127 158 60 1 8 165 31 185 3.69e-62 216
Msa0832670 MtrunA17_Chr1g0157731 61.392 158 58 1 8 165 37 191 9.39e-61 213
Msa0832670 MtrunA17_Chr3g0117511 52.252 111 53 0 62 172 180 290 1.19e-36 139
Msa0832670 MtrunA17_Chr3g0117511 36.111 108 65 2 1 108 174 277 2.95e-13 71.2
Msa0832670 MtrunA17_Chr4g0058991 54.545 110 50 0 63 172 207 316 1.32e-36 139
Msa0832670 MtrunA17_Chr4g0058991 37.113 97 57 2 11 107 210 302 2.18e-11 65.5
Msa0832670 MtrunA17_Chr5g0429661 54.286 105 48 0 63 167 120 224 1.66e-36 137
Msa0832670 MtrunA17_Chr5g0429661 37.113 97 57 2 11 107 123 215 2.76e-11 64.7
Msa0832670 MtrunA17_Chr7g0228531 52.252 111 52 1 62 172 217 326 1.97e-34 133
Msa0832670 MtrunA17_Chr5g0401731 53.271 107 50 0 62 168 12 118 1.24e-33 128
Msa0832670 MtrunA17_Chr4g0053431 50.467 107 53 0 62 168 2 108 2.81e-33 126
Msa0832670 MtrunA17_Chr4g0008551 51.961 102 49 0 64 165 37 138 1.04e-32 126
Msa0832670 MtrunA17_Chr6g0454921 50.467 107 53 0 62 168 12 118 1.87e-32 122
Msa0832670 MtrunA17_Chr5g0437321 51.456 103 50 0 60 162 14 116 7.50e-32 122
Msa0832670 MtrunA17_Chr7g0228481 55.000 100 44 1 62 161 217 315 8.44e-31 122
Msa0832670 MtrunA17_Chr7g0228401 43.382 136 52 2 62 172 252 387 1.86e-28 117
Msa0832670 MtrunA17_Chr3g0133601 46.729 107 55 2 62 167 34 139 1.91e-28 112
Msa0832670 MtrunA17_Chr1g0177901 56.977 86 37 0 76 161 5 90 8.90e-28 109
Msa0832670 MtrunA17_Chr5g0417621 52.041 98 47 0 68 165 137 234 1.77e-27 113
Msa0832670 MtrunA17_Chr4g0042501 50.000 98 49 0 68 165 108 205 5.91e-27 112
Msa0832670 MtrunA17_Chr6g0480581 49.485 97 49 0 68 164 7 103 2.51e-26 106
Msa0832670 MtrunA17_Chr5g0410961 48.039 102 52 1 65 165 14 115 4.44e-26 108
Msa0832670 MtrunA17_Chr4g0039971 27.508 309 192 8 63 367 13 293 6.61e-26 107
Msa0832670 MtrunA17_Chr3g0115821 49.524 105 50 2 63 165 12 115 1.23e-25 107
Msa0832670 MtrunA17_Chr1g0203411 44.545 110 60 1 61 169 10 119 2.05e-25 105
Msa0832670 MtrunA17_Chr4g0048511 44.860 107 58 1 60 165 10 116 2.64e-25 106
Msa0832670 MtrunA17_Chr2g0281071 45.794 107 57 1 60 165 10 116 5.62e-25 105
Msa0832670 MtrunA17_Chr3g0131121 39.850 133 77 2 65 194 14 146 9.08e-25 103
Msa0832670 MtrunA17_Chr3g0131121 33.663 101 64 2 11 111 15 112 4.34e-11 63.5
Msa0832670 MtrunA17_Chr3g0125801 47.170 106 56 0 68 173 19 124 1.10e-24 103
Msa0832670 MtrunA17_Chr4g0022911 40.580 138 79 2 63 199 13 148 1.22e-24 103
Msa0832670 MtrunA17_Chr2g0309911 47.115 104 53 2 64 165 11 114 1.66e-24 103
Msa0832670 MtrunA17_Chr4g0055981 47.059 102 53 1 67 167 59 160 1.78e-24 101
Msa0832670 MtrunA17_Chr2g0328771 44.068 118 60 2 63 174 20 137 2.41e-24 102
Msa0832670 MtrunA17_Chr7g0270891 48.077 104 53 1 63 165 12 115 2.51e-24 103
Msa0832670 MtrunA17_Chr4g0022901 40.441 136 77 2 63 194 13 148 2.51e-24 101
Msa0832670 MtrunA17_Chr6g0460661 44.211 95 53 0 65 159 16 110 3.15e-24 98.6
Msa0832670 MtrunA17_Chr1g0193801 47.115 104 54 1 63 165 12 115 3.19e-24 103
Msa0832670 MtrunA17_Chr6g0460671 43.243 111 62 1 56 165 89 199 3.45e-24 102
Msa0832670 MtrunA17_Chr5g0441131 37.126 167 96 4 62 224 8 169 3.53e-24 99.0
Msa0832670 MtrunA17_Chr5g0440781 46.218 119 60 3 62 176 11 129 3.93e-24 99.0
Msa0832670 MtrunA17_Chr3g0088461 48.077 104 53 1 63 165 22 125 5.04e-24 102
Msa0832670 MtrunA17_Chr1g0186061 45.378 119 61 3 55 171 12 128 5.54e-24 100
Msa0832670 MtrunA17_Chr1g0186061 38.384 99 58 2 9 107 21 116 5.54e-12 65.9
Msa0832670 MtrunA17_Chr1g0193371 46.667 105 53 2 63 165 12 115 7.03e-24 102
Msa0832670 MtrunA17_Chr5g0395281 44.231 104 57 1 63 165 12 115 7.74e-24 100
Msa0832670 MtrunA17_Chr1g0180391 47.619 105 54 1 62 165 18 122 9.10e-24 99.0
Msa0832670 MtrunA17_Chr2g0327821 45.283 106 57 1 62 166 5 110 1.17e-23 99.0
Msa0832670 MtrunA17_Chr7g0254261 48.980 98 50 0 68 165 92 189 1.23e-23 101
Msa0832670 MtrunA17_Chr5g0440761 46.218 119 60 3 62 176 11 129 1.26e-23 99.8
Msa0832670 MtrunA17_Chr5g0441141 46.218 119 60 3 62 176 11 129 1.32e-23 99.8
Msa0832670 MtrunA17_Chr4g0022881 38.710 124 75 1 65 187 14 137 1.50e-23 98.6
Msa0832670 MtrunA17_Chr4g0022881 30.769 104 69 2 8 111 12 112 5.22e-11 62.4
Msa0832670 MtrunA17_Chr1g0168661 49.038 104 50 2 65 166 23 125 1.70e-23 99.0
Msa0832670 MtrunA17_Chr3g0099131 43.810 105 58 1 62 165 40 144 1.75e-23 102
Msa0832670 MtrunA17_Chr8g0385321 45.098 102 55 1 65 165 14 115 2.00e-23 100
Msa0832670 MtrunA17_Chr4g0037141 46.078 102 54 1 65 165 14 115 2.21e-23 99.4
Msa0832670 MtrunA17_Chr4g0037141 34.653 101 63 2 11 111 15 112 2.21e-11 64.3
Msa0832670 MtrunA17_Chr8g0342541 45.714 105 53 3 64 165 12 115 2.23e-23 100
Msa0832670 MtrunA17_Chr8g0343831 42.593 108 61 1 65 171 10 117 2.52e-23 98.6
Msa0832670 MtrunA17_Chr2g0330041 46.667 105 52 3 64 165 12 115 3.67e-23 100
Msa0832670 MtrunA17_Chr3g0103281 44.954 109 58 2 62 168 10 118 4.27e-23 99.4
Msa0832670 MtrunA17_Chr7g0233061 45.536 112 56 2 64 172 179 288 5.42e-23 99.8
Msa0832670 MtrunA17_Chr4g0058631 44.231 104 57 1 63 165 12 115 5.67e-23 99.8
Msa0832670 MtrunA17_Chr4g0032401 44.444 108 59 1 59 165 13 120 6.09e-23 99.0
Msa0832670 MtrunA17_Chr8g0342521 46.667 105 52 3 64 165 12 115 6.21e-23 99.4
Msa0832670 MtrunA17_Chr4g0022931 46.154 104 55 1 63 165 13 116 6.43e-23 97.8
Msa0832670 MtrunA17_Chr3g0080861 43.925 107 59 1 63 168 37 143 7.02e-23 100
Msa0832670 MtrunA17_Chr1g0211161 44.762 105 55 2 63 165 13 116 8.14e-23 96.3
Msa0832670 MtrunA17_Chr4g0044421 43.810 105 58 1 62 165 11 115 1.04e-22 95.1
Msa0832670 MtrunA17_Chr7g0261281 47.115 104 54 1 63 165 12 115 1.14e-22 97.1
Msa0832670 MtrunA17_Chr7g0261281 34.951 103 64 2 9 111 13 112 3.25e-11 63.9
Msa0832670 MtrunA17_Chr3g0117091 45.714 105 54 2 63 165 12 115 1.22e-22 98.6
Msa0832670 MtrunA17_Chr1g0209661 42.056 107 61 1 61 166 25 131 1.27e-22 97.8
Msa0832670 MtrunA17_Chr8g0387421 45.370 108 57 2 60 165 8 115 1.65e-22 97.4
Msa0832670 MtrunA17_Chr8g0349261 47.170 106 52 3 63 165 13 117 2.06e-22 97.1
Msa0832670 MtrunA17_Chr1g0154031 45.370 108 58 1 63 169 76 183 2.17e-22 98.6
Msa0832670 MtrunA17_Chr8g0346561 42.982 114 64 1 63 175 12 125 3.95e-22 96.3
Msa0832670 MtrunA17_Chr7g0274581 38.312 154 87 5 63 211 12 162 4.08e-22 94.0
Msa0832670 MtrunA17_Chr3g0121241 44.231 104 57 1 63 165 42 145 4.87e-22 95.9
Msa0832670 MtrunA17_Chr7g0217221 43.519 108 60 1 65 171 14 121 4.95e-22 95.1
Msa0832670 MtrunA17_Chr5g0435101 41.176 102 59 1 65 165 13 114 5.21e-22 93.6
Msa0832670 MtrunA17_Chr6g0483051 38.926 149 86 3 10 158 69 212 6.49e-22 98.6
Msa0832670 MtrunA17_Chr6g0483051 32.680 153 100 2 10 162 16 165 3.67e-19 90.1
Msa0832670 MtrunA17_Chr4g0042671 42.373 118 63 2 63 179 12 125 6.77e-22 97.1
Msa0832670 MtrunA17_Chr6g0470971 42.857 119 67 1 52 169 3 121 7.08e-22 95.1
Msa0832670 MtrunA17_Chr4g0030881 44.037 109 53 2 65 165 9 117 1.21e-21 94.0
Msa0832670 MtrunA17_Chr1g0167691 46.154 104 55 1 63 165 12 115 1.58e-21 93.6
Msa0832670 MtrunA17_Chr8g0342481 45.545 101 51 3 68 165 17 116 1.66e-21 95.9
Msa0832670 MtrunA17_Chr2g0323411 44.231 104 57 1 63 165 12 115 1.76e-21 94.7
Msa0832670 MtrunA17_Chr8g0362231 40.404 99 59 0 67 165 24 122 2.07e-21 95.9
Msa0832670 MtrunA17_Chr8g0354661 42.991 107 60 1 63 168 37 143 2.12e-21 96.7
Msa0832670 MtrunA17_Chr1g0167661 45.192 104 56 1 63 165 12 115 2.14e-21 93.2
Msa0832670 MtrunA17_Chr5g0416341 39.000 100 61 0 67 166 28 127 2.29e-21 96.3
Msa0832670 MtrunA17_Chr5g0417821 43.269 104 58 1 63 165 7 110 2.54e-21 93.6
Msa0832670 MtrunA17_Chr5g0397231 45.631 103 54 2 60 160 8 110 2.79e-21 94.4
Msa0832670 MtrunA17_Chr7g0254411 39.669 121 72 1 65 184 14 134 3.64e-21 94.0
Msa0832670 MtrunA17_Chr1g0187761 45.714 105 54 2 63 165 12 115 4.07e-21 92.4
Msa0832670 MtrunA17_Chr7g0271241 47.000 100 50 2 63 160 12 110 5.51e-21 94.0
Msa0832670 MtrunA17_Chr4g0057031 46.602 103 52 2 65 165 14 115 5.88e-21 92.0
Msa0832670 MtrunA17_Chr8g0334881 47.059 102 52 2 65 164 12 113 6.31e-21 93.2
Msa0832670 MtrunA17_Chr1g0151941 46.667 105 53 3 64 165 12 116 9.39e-21 91.3
Msa0832670 MtrunA17_Chr2g0323351 43.689 103 57 1 63 164 12 114 9.68e-21 91.3
Msa0832670 MtrunA17_Chr7g0228891 43.810 105 56 2 63 165 12 115 9.95e-21 91.7
Msa0832670 MtrunA17_Chr1g0203441 44.118 102 56 1 65 165 15 116 1.00e-20 91.7
Msa0832670 MtrunA17_Chr7g0217741 43.269 104 58 1 63 165 12 115 1.09e-20 92.0
Msa0832670 MtrunA17_Chr3g0135311 45.283 106 56 2 62 165 11 116 1.19e-20 92.8
Msa0832670 MtrunA17_Chr7g0240821 39.516 124 72 2 67 189 5 126 1.30e-20 90.1
Msa0832670 MtrunA17_Chr4g0060721 37.903 124 68 2 63 181 13 132 1.36e-20 92.4
Msa0832670 MtrunA17_Chr7g0228231 42.308 104 59 1 62 164 13 116 1.71e-20 89.4
Msa0832670 MtrunA17_Chr7g0228231 33.333 117 75 2 9 125 15 128 1.07e-11 63.9
Msa0832670 MtrunA17_Chr4g0070641 41.346 104 60 1 63 165 12 115 2.80e-20 87.8
Msa0832670 MtrunA17_Chr4g0070611 41.346 104 60 1 63 165 12 115 3.33e-20 90.9
Msa0832670 MtrunA17_Chr3g0110351 45.714 105 54 2 63 165 12 115 4.53e-20 90.5
Msa0832670 MtrunA17_Chr6g0452271 43.269 104 57 2 64 165 12 115 4.85e-20 90.9
Msa0832670 MtrunA17_Chr4g0028311 48.148 108 53 3 64 168 12 119 5.50e-20 90.5
Msa0832670 MtrunA17_Chr4g0022891 44.554 101 53 2 65 163 14 113 6.08e-20 88.6
Msa0832670 MtrunA17_Chr5g0434571 45.714 105 54 2 63 165 48 151 6.35e-20 90.5
Msa0832670 MtrunA17_Chr1g0192411 44.762 105 57 1 63 166 12 116 7.23e-20 91.3
Msa0832670 MtrunA17_Chr6g0453471 42.308 104 59 1 63 165 12 115 1.11e-19 90.1
Msa0832670 MtrunA17_Chr4g0068061 43.269 104 58 1 63 165 12 115 1.38e-19 89.4
Msa0832670 MtrunA17_Chr2g0293911 40.517 116 66 2 62 176 23 136 1.56e-19 89.0
Msa0832670 MtrunA17_Chr6g0487491 42.553 141 63 6 64 186 12 152 2.13e-19 87.4
Msa0832670 MtrunA17_Chr5g0434841 41.346 104 60 1 63 165 20 123 2.18e-19 88.6
Msa0832670 MtrunA17_Chr7g0275911 43.434 99 55 1 68 165 17 115 2.35e-19 87.4
Msa0832670 MtrunA17_Chr1g0194301 38.938 113 66 2 65 176 35 145 2.38e-19 87.8
Msa0832670 MtrunA17_Chr5g0434831 39.423 104 62 1 63 165 7 110 2.39e-19 85.5
Msa0832670 MtrunA17_Chr3g0092401 40.196 102 60 1 65 165 15 116 2.95e-19 88.2
Msa0832670 MtrunA17_Chr2g0322521 45.794 107 57 1 63 168 29 135 2.95e-19 89.4
Msa0832670 MtrunA17_Chr5g0400821 44.340 106 57 2 62 165 11 116 3.04e-19 87.8
Msa0832670 MtrunA17_Chr1g0152011 43.396 106 58 2 62 165 11 116 3.77e-19 88.2
Msa0832670 MtrunA17_Chr4g0013361 41.818 110 62 2 63 170 10 119 4.95e-19 87.0
Msa0832670 MtrunA17_Chr7g0220341 31.461 178 107 2 65 239 27 192 5.55e-19 86.7
Msa0832670 MtrunA17_Chr6g0450101 40.385 104 61 1 62 164 13 116 5.82e-19 85.1
Msa0832670 MtrunA17_Chr6g0450101 33.945 109 69 2 9 117 15 120 8.10e-11 61.6
Msa0832670 MtrunA17_Chr2g0311221 45.455 99 52 2 64 160 14 112 1.26e-18 86.7
Msa0832670 MtrunA17_Chr5g0434931 39.216 102 61 1 65 165 37 138 1.37e-18 85.5
Msa0832670 MtrunA17_Chr5g0434911 36.036 111 70 1 56 165 14 124 1.53e-18 85.5
Msa0832670 MtrunA17_Chr4g0068921 38.793 116 68 2 62 176 23 136 1.56e-18 83.6
Msa0832670 MtrunA17_Chr1g0194951 43.269 104 58 1 63 165 12 115 1.75e-18 86.7
Msa0832670 MtrunA17_Chr2g0327351 45.545 101 53 2 62 160 11 111 2.25e-18 85.5
Msa0832670 MtrunA17_Chr6g0453211 40.594 101 51 2 65 160 14 110 2.56e-18 85.5
Msa0832670 MtrunA17_Chr1g0194291 38.053 113 67 2 65 176 23 133 2.72e-18 84.3
Msa0832670 MtrunA17_Chr7g0264641 43.689 103 56 2 65 165 14 116 3.12e-18 84.3
Msa0832670 MtrunA17_Chr8g0360111 39.394 99 59 1 65 162 27 125 7.36e-18 83.2
Msa0832670 MtrunA17_Chr3g0104501 43.269 104 46 2 13 116 94 184 9.40e-18 81.3
Msa0832670 MtrunA17_Chr7g0228991 39.216 102 61 1 65 165 31 132 1.06e-17 82.8
Msa0832670 MtrunA17_Chr7g0247131 52.941 68 32 0 98 165 14 81 1.10e-17 82.8
Msa0832670 MtrunA17_Chr4g0054391 45.455 99 51 3 64 159 12 110 2.06e-17 82.4
Msa0832670 MtrunA17_Chr4g0072751 44.898 98 52 2 65 160 14 111 5.53e-17 82.0
Msa0832670 MtrunA17_Chr4g0046181 51.667 60 29 0 57 116 213 272 1.33e-15 77.0
Msa0832670 MtrunA17_Chr7g0269831 46.154 104 55 1 63 165 12 115 2.40e-15 77.0
Msa0832670 MtrunA17_Chr3g0099141 40.698 86 50 1 62 146 39 124 3.52e-15 72.4
Msa0832670 MtrunA17_Chr5g0425591 43.678 87 47 2 59 143 5 91 4.14e-15 70.9
Msa0832670 MtrunA17_Chr7g0238651 28.962 183 103 5 65 223 7 186 7.39e-15 75.5
Msa0832670 MtrunA17_Chr3g0093811 45.714 70 38 0 98 167 18 87 5.61e-14 72.0
Msa0832670 MtrunA17_Chr7g0233161 56.604 53 23 0 64 116 298 350 1.22e-13 72.0
Msa0832670 MtrunA17_Chr7g0233151 46.552 58 31 0 115 172 1 58 4.59e-13 67.0
Msa0832670 MtrunA17_Chr5g0395221 37.662 77 47 1 63 138 12 88 3.92e-12 62.0
Msa0832670 MtrunA17_Chr5g0434901 40.299 67 40 0 97 163 8 74 5.95e-12 62.4
Msa0832670 MtrunA17_Chr7g0274481 39.759 83 49 1 68 150 10 91 8.06e-12 67.4
Msa0832670 MtrunA17_Chr3g0104491 44.828 58 32 0 110 167 12 69 8.77e-12 65.5
Msa0832670 MtrunA17_Chr2g0323321 34.021 97 63 1 60 155 8 104 9.44e-12 61.6
Msa0832670 MtrunA17_Chr4g0042611 37.662 77 47 1 63 138 12 88 3.39e-11 59.3
Msa0832670 MtrunA17_Chr7g0229101 39.394 66 40 0 98 163 8 73 5.44e-11 62.0
Msa0832670 MtrunA17_Chr8g0342511 38.554 83 47 3 58 137 6 87 8.01e-11 58.5
Msa0832670 MtrunA17_Chr7g0229131 38.806 67 41 0 98 164 8 74 8.99e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0832670 AT3G09370.1 39.898 391 172 10 6 383 74 414 1.32e-68 226
Msa0832670 AT3G09370.2 39.898 391 172 10 6 383 79 419 1.56e-68 226
Msa0832670 AT3G09370.3 39.898 391 172 10 6 383 87 427 2.56e-68 226
Msa0832670 AT5G02320.3 63.226 155 54 1 11 165 16 167 1.88e-65 218
Msa0832670 AT5G02320.1 63.226 155 54 1 11 165 76 227 2.47e-65 219
Msa0832670 AT5G02320.2 63.226 155 54 1 11 165 76 227 2.47e-65 219
Msa0832670 AT5G11510.5 60.127 158 60 1 8 165 27 181 1.17e-60 211
Msa0832670 AT5G11510.2 60.127 158 60 1 8 165 27 181 1.30e-60 211
Msa0832670 AT5G11510.3 60.127 158 60 1 8 165 27 181 2.56e-60 211
Msa0832670 AT5G11510.1 60.127 158 60 1 8 165 27 181 2.56e-60 211
Msa0832670 AT5G11510.4 60.127 158 60 1 8 165 27 181 2.56e-60 211
Msa0832670 AT4G32730.1 59.494 158 61 1 8 165 33 187 5.49e-60 209
Msa0832670 AT4G32730.5 59.494 158 61 1 8 165 33 187 1.91e-59 209
Msa0832670 AT4G32730.4 59.494 158 61 1 8 165 33 187 1.91e-59 209
Msa0832670 AT4G32730.3 59.494 158 61 1 8 165 33 187 1.91e-59 209
Msa0832670 AT4G32730.2 59.494 158 61 1 8 165 33 187 1.91e-59 209
Msa0832670 AT4G00540.2 51.163 172 73 3 8 171 44 212 8.13e-50 174
Msa0832670 AT4G00540.2 36.190 105 60 3 7 108 100 200 4.19e-11 64.7
Msa0832670 AT4G00540.1 51.163 172 73 3 8 171 42 210 3.11e-49 173
Msa0832670 AT4G00540.1 36.190 105 60 3 7 108 98 198 6.13e-11 64.3
Msa0832670 AT4G18770.1 48.252 143 71 2 55 196 207 347 3.49e-40 149
Msa0832670 AT4G18770.1 37.113 97 57 2 11 107 218 310 5.09e-13 70.9
Msa0832670 AT5G58850.1 50.893 112 55 0 56 167 96 207 3.51e-36 138
Msa0832670 AT3G27785.1 55.238 105 47 0 63 167 187 291 3.96e-35 135
Msa0832670 AT3G27785.1 37.113 97 57 2 11 107 190 282 8.16e-13 70.5
Msa0832670 AT5G40360.1 52.727 110 52 0 65 174 158 267 2.51e-34 131
Msa0832670 AT5G40360.1 37.113 97 57 2 11 107 159 251 2.14e-11 65.5
Msa0832670 AT3G09230.1 52.885 104 49 0 62 165 52 155 3.24e-33 129
Msa0832670 AT3G09230.1 36.634 101 60 2 11 111 56 152 3.70e-11 65.1
Msa0832670 AT5G11050.1 45.000 120 66 0 48 167 88 207 1.25e-32 128
Msa0832670 AT4G37260.1 47.414 116 61 0 60 175 8 123 7.06e-32 124
Msa0832670 AT3G55730.1 50.980 102 50 0 64 165 55 156 3.11e-31 124
Msa0832670 AT5G67300.1 50.962 104 51 0 62 165 3 106 1.15e-30 120
Msa0832670 AT2G23290.1 50.943 106 52 0 62 167 10 115 1.76e-30 120
Msa0832670 AT3G50060.1 50.000 108 54 0 62 169 3 110 1.85e-30 119
Msa0832670 AT2G39880.1 50.000 104 52 0 64 167 49 152 3.32e-30 120
Msa0832670 AT2G25230.1 50.485 103 51 0 62 164 23 125 2.94e-29 114
Msa0832670 AT1G69560.1 50.000 98 49 0 68 165 110 207 1.49e-27 112
Msa0832670 AT1G69560.2 50.000 98 49 0 68 165 126 223 1.54e-27 112
Msa0832670 AT1G26780.1 48.544 103 53 0 63 165 96 198 2.92e-27 110
Msa0832670 AT1G26780.2 48.544 103 53 0 63 165 96 198 5.96e-27 111
Msa0832670 AT1G17950.1 48.485 99 51 0 68 166 8 106 7.51e-27 108
Msa0832670 AT4G33450.1 48.980 98 50 0 68 165 22 119 1.06e-26 108
Msa0832670 AT5G40430.1 45.370 108 58 1 62 169 51 157 2.14e-26 107
Msa0832670 AT3G29020.1 42.857 126 63 1 68 193 68 184 3.30e-26 106
Msa0832670 AT5G17800.1 43.200 125 62 2 68 183 96 220 5.99e-26 107
Msa0832670 AT5G16770.4 49.038 104 52 1 63 165 12 115 6.78e-26 107
Msa0832670 AT5G16770.3 49.038 104 52 1 63 165 12 115 6.78e-26 107
Msa0832670 AT5G16770.1 49.038 104 52 1 63 165 12 115 1.06e-25 107
Msa0832670 AT5G16770.2 49.038 104 52 1 63 165 12 115 1.06e-25 107
Msa0832670 AT3G29020.2 42.857 126 63 1 68 193 70 186 1.14e-25 106
Msa0832670 AT1G35515.1 48.039 102 52 1 65 165 14 115 2.51e-25 103
Msa0832670 AT1G73410.2 48.039 102 53 0 68 169 9 110 4.47e-25 102
Msa0832670 AT1G73410.1 49.495 99 50 0 68 166 9 107 5.40e-25 103
Msa0832670 AT4G01680.3 48.077 104 53 1 63 165 12 115 9.42e-25 102
Msa0832670 AT5G59780.3 43.243 111 62 1 57 166 2 112 1.19e-24 102
Msa0832670 AT3G12720.1 44.860 107 56 2 61 165 20 125 1.89e-24 103
Msa0832670 AT3G02940.2 48.077 104 53 1 63 165 12 115 1.91e-24 103
Msa0832670 AT1G22640.1 46.078 102 54 1 65 165 14 115 1.95e-24 102
Msa0832670 AT1G22640.1 34.653 101 63 2 11 111 15 112 2.50e-11 64.3
Msa0832670 AT5G40330.1 43.396 106 59 1 61 165 10 115 2.01e-24 100
Msa0832670 AT5G14750.1 43.519 108 60 1 59 165 12 119 2.37e-24 100
Msa0832670 AT4G01680.1 48.077 104 53 1 63 165 12 115 2.41e-24 103
Msa0832670 AT3G02940.1 48.077 104 53 1 63 165 12 115 2.63e-24 103
Msa0832670 AT3G02940.3 48.077 104 53 1 63 165 12 115 2.63e-24 103
Msa0832670 AT3G46130.1 46.602 103 54 1 65 166 11 113 2.93e-24 101
Msa0832670 AT1G56160.1 47.619 105 51 3 64 165 14 117 3.94e-24 102
Msa0832670 AT1G34670.1 49.038 104 52 1 63 165 12 115 5.06e-24 103
Msa0832670 AT5G10280.1 47.619 105 52 2 63 165 12 115 5.11e-24 102
Msa0832670 AT3G27920.1 37.500 168 87 4 60 209 11 178 5.98e-24 100
Msa0832670 AT3G18100.1 38.356 146 86 2 13 158 498 639 6.87e-24 105
Msa0832670 AT3G18100.1 31.847 157 103 3 10 165 442 595 5.45e-21 96.3
Msa0832670 AT3G18100.1 32.558 129 79 3 46 172 423 545 2.09e-12 69.7
Msa0832670 AT3G18100.1 32.381 105 67 2 3 107 539 639 8.83e-11 64.7
Msa0832670 AT3G18100.3 38.356 146 86 2 13 158 450 591 7.25e-24 105
Msa0832670 AT3G18100.3 31.847 157 103 3 10 165 394 547 5.86e-21 96.3
Msa0832670 AT3G18100.3 32.558 129 79 3 46 172 375 497 2.35e-12 69.7
Msa0832670 AT4G28110.1 46.078 102 54 1 65 165 14 115 7.72e-24 100
Msa0832670 AT3G18100.4 38.356 146 86 2 13 158 337 478 7.80e-24 104
Msa0832670 AT3G18100.4 31.847 157 103 3 10 165 281 434 6.90e-21 95.9
Msa0832670 AT3G18100.4 32.558 129 79 3 46 172 262 384 3.01e-12 68.9
Msa0832670 AT3G18100.4 32.381 105 67 2 3 107 378 478 8.18e-11 64.7
Msa0832670 AT3G48920.1 35.052 194 109 5 68 247 23 213 8.05e-24 100
Msa0832670 AT5G39700.1 42.400 125 66 2 68 186 59 183 8.39e-24 98.6
Msa0832670 AT3G18100.2 38.356 146 86 2 13 158 285 426 8.68e-24 104
Msa0832670 AT3G18100.2 31.847 157 103 3 10 165 229 382 7.17e-21 95.9
Msa0832670 AT3G18100.2 32.558 129 79 3 46 172 210 332 3.46e-12 68.9
Msa0832670 AT3G18100.2 32.381 105 67 2 3 107 326 426 9.34e-11 64.3
Msa0832670 AT1G74080.1 46.602 103 54 1 63 164 12 114 9.67e-24 101
Msa0832670 AT3G30210.1 48.113 106 54 1 65 169 29 134 1.04e-23 100
Msa0832670 AT5G06100.1 40.833 120 67 2 50 168 22 138 1.09e-23 103
Msa0832670 AT2G47190.1 42.241 116 64 2 62 176 19 132 1.10e-23 100
Msa0832670 AT4G09460.1 46.078 102 54 1 65 165 14 115 1.10e-23 99.4
Msa0832670 AT5G65230.1 48.077 104 53 1 63 165 12 115 1.15e-23 100
Msa0832670 AT1G57560.2 46.667 105 53 2 63 165 12 115 1.16e-23 100
Msa0832670 AT3G13890.2 46.154 104 54 2 64 165 12 115 1.25e-23 101
Msa0832670 AT5G06100.5 40.833 120 67 2 50 168 22 138 1.33e-23 103
Msa0832670 AT5G06100.2 40.833 120 67 2 50 168 22 138 1.33e-23 103
Msa0832670 AT5G06100.3 40.833 120 67 2 50 168 22 138 1.33e-23 103
Msa0832670 AT5G06100.4 40.833 120 67 2 50 168 22 138 1.33e-23 103
Msa0832670 AT1G18570.1 46.154 104 55 1 63 165 13 116 1.36e-23 101
Msa0832670 AT3G11440.2 43.925 107 59 1 63 168 41 147 1.39e-23 103
Msa0832670 AT1G57560.1 46.667 105 53 2 63 165 12 115 1.48e-23 100
Msa0832670 AT4G21440.1 45.192 104 56 1 63 165 12 115 1.68e-23 101
Msa0832670 AT4G13480.1 50.459 109 49 3 65 171 8 113 1.72e-23 99.4
Msa0832670 AT4G13480.1 35.922 103 63 2 9 111 7 106 4.28e-11 63.5
Msa0832670 AT5G26660.1 47.619 105 52 2 63 165 12 115 2.21e-23 100
Msa0832670 AT3G13540.1 45.455 99 53 1 68 165 28 126 2.26e-23 99.0
Msa0832670 AT1G09540.1 47.619 105 52 2 63 165 12 115 2.45e-23 101
Msa0832670 AT3G53200.1 44.860 107 58 1 63 168 9 115 2.73e-23 98.2
Msa0832670 AT3G11440.3 43.925 107 59 1 63 168 41 147 3.23e-23 102
Msa0832670 AT3G11440.4 43.925 107 59 1 63 168 41 147 3.23e-23 102
Msa0832670 AT3G11440.1 43.925 107 59 1 63 168 41 147 3.23e-23 102
Msa0832670 AT4G05100.1 45.192 104 56 1 63 165 13 116 3.82e-23 99.8
Msa0832670 AT3G61250.1 46.667 105 53 2 63 165 12 115 5.11e-23 99.0
Msa0832670 AT4G38620.1 45.098 102 55 1 65 165 14 115 6.39e-23 98.2
Msa0832670 AT4G38620.1 34.653 101 63 2 11 111 15 112 5.75e-11 63.5
Msa0832670 AT1G74430.1 44.231 104 57 1 63 165 12 115 6.88e-23 98.2
Msa0832670 AT4G26930.1 45.631 103 55 1 63 164 19 121 8.37e-23 100
Msa0832670 AT3G08500.1 47.115 104 54 1 63 165 30 133 8.49e-23 99.4
Msa0832670 AT2G32460.1 45.794 107 57 1 63 168 18 124 8.92e-23 100
Msa0832670 AT2G32460.2 45.794 107 57 1 63 168 6 112 9.05e-23 100
Msa0832670 AT4G01680.2 43.103 116 53 1 63 165 12 127 9.53e-23 99.0
Msa0832670 AT5G54230.1 32.796 186 116 4 65 241 14 199 1.05e-22 98.6
Msa0832670 AT5G56110.1 45.794 107 56 2 64 168 12 118 1.31e-22 98.2
Msa0832670 AT3G12820.1 48.571 105 50 3 64 165 14 117 1.39e-22 96.3
Msa0832670 AT3G24310.1 47.706 109 53 3 65 171 20 126 1.40e-22 97.1
Msa0832670 AT3G24310.1 34.259 108 68 2 9 116 19 123 5.30e-11 63.5
Msa0832670 AT5G35550.1 39.655 116 69 1 58 172 9 124 1.80e-22 96.7
Msa0832670 AT3G13890.1 42.478 113 54 2 64 165 12 124 1.92e-22 98.6
Msa0832670 AT1G79180.1 45.161 124 63 3 64 185 14 134 2.24e-22 97.1
Msa0832670 AT3G23250.1 45.192 104 56 1 63 165 12 115 2.73e-22 96.7
Msa0832670 AT3G23250.1 34.951 103 64 2 9 111 13 112 5.37e-12 66.6
Msa0832670 AT5G61420.2 48.077 104 53 1 63 165 12 115 3.13e-22 97.8
Msa0832670 AT4G34990.1 45.098 102 55 1 65 165 14 115 5.76e-22 95.5
Msa0832670 AT5G12870.1 44.231 104 57 1 63 165 18 121 6.34e-22 95.5
Msa0832670 AT1G63910.1 45.370 108 57 2 60 165 8 115 7.04e-22 97.1
Msa0832670 AT5G07690.1 48.544 103 52 1 63 164 12 114 1.13e-21 95.9
Msa0832670 AT2G26960.1 32.127 221 127 7 63 266 20 234 1.17e-21 97.1
Msa0832670 AT2G31180.1 40.000 140 81 3 64 201 12 150 1.26e-21 94.0
Msa0832670 AT5G07700.1 47.115 104 54 1 63 165 12 115 1.63e-21 95.5
Msa0832670 AT5G07700.2 47.115 104 54 1 63 165 12 115 1.63e-21 95.5
Msa0832670 AT2G16720.1 43.137 102 57 1 65 165 14 115 1.84e-21 94.0
Msa0832670 AT5G55020.1 44.660 103 56 1 63 164 26 128 1.93e-21 97.1
Msa0832670 AT3G47600.1 40.336 119 62 2 65 178 14 128 2.12e-21 95.1
Msa0832670 AT5G62470.1 43.564 101 57 0 65 165 14 114 2.47e-21 95.1
Msa0832670 AT5G23000.1 49.524 105 50 3 64 165 12 116 5.83e-21 93.6
Msa0832670 AT4G12350.1 44.340 106 55 3 63 165 11 115 6.21e-21 92.8
Msa0832670 AT5G40350.1 34.667 150 95 2 62 210 16 163 7.47e-21 90.9
Msa0832670 AT3G01140.2 44.231 104 57 1 63 165 12 115 8.04e-21 93.6
Msa0832670 AT4G17785.2 42.157 102 58 1 65 165 15 116 8.77e-21 93.6
Msa0832670 AT3G01140.1 44.231 104 57 1 63 165 55 158 8.94e-21 94.0
Msa0832670 AT4G17785.1 42.157 102 58 1 65 165 15 116 9.41e-21 93.6
Msa0832670 AT3G28470.1 44.330 97 53 1 65 160 14 110 1.41e-20 92.4
Msa0832670 AT5G15310.4 43.269 104 58 1 63 165 12 115 1.51e-20 90.9
Msa0832670 AT1G16490.1 43.697 119 64 3 64 180 14 131 1.57e-20 91.3
Msa0832670 AT4G25560.1 45.455 99 53 1 68 165 15 113 1.89e-20 91.3
Msa0832670 AT1G74650.1 44.118 102 56 1 65 165 14 115 2.11e-20 92.0
Msa0832670 AT4G22680.1 45.631 103 53 2 65 165 14 115 2.28e-20 90.9
Msa0832670 AT5G15310.1 43.269 104 58 1 63 165 12 115 2.60e-20 91.7
Msa0832670 AT5G62470.2 43.396 106 51 2 65 165 14 115 2.66e-20 92.0
Msa0832670 AT5G15310.2 43.269 104 58 1 63 165 12 115 2.98e-20 91.3
Msa0832670 AT1G06180.1 44.762 105 55 2 63 165 12 115 2.98e-20 90.1
Msa0832670 AT5G60890.1 43.137 102 57 1 65 165 14 115 3.71e-20 90.9
Msa0832670 AT1G08810.1 41.964 112 56 2 63 169 12 119 3.94e-20 90.5
Msa0832670 AT4G37780.1 46.729 107 47 3 65 165 14 116 4.43e-20 90.9
Msa0832670 AT3G27810.1 40.000 125 68 2 62 185 19 137 4.49e-20 89.0
Msa0832670 AT3G27810.1 33.945 109 69 2 9 117 21 126 8.59e-11 62.0
Msa0832670 AT3G28910.1 43.137 102 57 1 65 165 14 115 4.92e-20 90.9
Msa0832670 AT1G14350.2 37.000 100 63 0 67 166 27 126 5.22e-20 92.0
Msa0832670 AT1G14350.1 37.000 100 63 0 67 166 27 126 5.22e-20 92.0
Msa0832670 AT2G26950.1 38.983 118 62 3 63 174 16 129 6.53e-20 91.3
Msa0832670 AT5G57620.1 47.573 103 52 2 65 165 14 116 7.17e-20 90.5
Msa0832670 AT1G25340.1 41.748 103 59 1 65 166 20 122 8.22e-20 89.7
Msa0832670 AT1G66230.1 45.192 104 56 1 63 165 12 115 8.49e-20 89.4
Msa0832670 AT1G68320.1 38.889 108 65 1 60 166 16 123 1.01e-19 89.4
Msa0832670 AT5G16600.1 46.154 104 55 1 63 165 12 115 1.26e-19 89.7
Msa0832670 AT2G02820.3 36.000 100 64 0 67 166 32 131 1.42e-19 89.7
Msa0832670 AT3G49690.1 46.602 103 53 2 65 165 14 116 1.89e-19 89.0
Msa0832670 AT5G65790.1 45.631 103 54 2 65 165 14 116 2.36e-19 89.7
Msa0832670 AT2G02820.1 36.000 100 64 0 67 166 32 131 2.44e-19 90.5
Msa0832670 AT2G02820.2 36.000 100 64 0 67 166 32 131 2.46e-19 90.5
Msa0832670 AT1G48000.1 39.091 110 64 2 68 176 37 144 2.75e-19 87.0
Msa0832670 AT1G25340.2 41.176 102 56 1 65 166 20 117 2.84e-19 87.8
Msa0832670 AT3G60460.1 40.708 113 65 2 54 164 2 114 2.86e-19 88.2
Msa0832670 AT5G52600.1 42.056 107 60 2 64 168 12 118 3.22e-19 85.9
Msa0832670 AT5G14340.1 41.905 105 58 2 63 165 24 127 3.41e-19 87.4
Msa0832670 AT3G12820.2 55.882 68 30 0 98 165 2 69 3.60e-19 85.5
Msa0832670 AT1G25340.3 41.176 102 56 1 65 166 20 117 3.73e-19 88.2
Msa0832670 AT1G18710.1 39.623 106 63 1 63 167 12 117 5.44e-19 87.0
Msa0832670 AT3G01530.1 39.130 115 69 1 56 169 18 132 5.62e-19 85.5
Msa0832670 AT3G62610.1 44.118 102 56 1 65 165 14 115 1.42e-18 87.0
Msa0832670 AT5G49330.1 44.231 104 57 1 63 165 12 115 1.85e-18 86.7
Msa0832670 AT2G36890.1 41.304 138 75 4 64 195 12 149 1.95e-18 85.9
Msa0832670 AT1G66370.1 40.385 104 61 1 63 165 8 111 2.05e-18 84.7
Msa0832670 AT2G36890.2 41.304 138 75 4 64 195 53 190 2.73e-18 85.9
Msa0832670 AT5G62320.1 40.708 113 55 3 63 165 13 123 3.71e-18 84.0
Msa0832670 AT5G14750.3 48.529 68 35 0 98 165 18 85 3.77e-18 82.0
Msa0832670 AT5G35550.2 48.000 75 39 0 98 172 53 127 4.55e-18 84.0
Msa0832670 AT3G53200.2 50.704 71 35 0 98 168 12 82 4.89e-18 82.8
Msa0832670 AT5G49620.1 38.793 116 68 2 62 176 25 138 6.03e-18 84.7
Msa0832670 AT5G26660.2 43.956 91 40 1 75 165 5 84 7.80e-18 84.3
Msa0832670 AT1G79180.2 35.032 157 64 3 64 185 14 167 9.45e-18 84.3
Msa0832670 AT1G66380.1 40.741 108 63 1 59 165 4 111 1.71e-17 79.3
Msa0832670 AT2G47460.1 43.269 104 57 2 64 165 12 115 2.52e-17 83.6
Msa0832670 AT3G47600.2 45.679 81 44 0 98 178 42 122 3.63e-17 82.4
Msa0832670 AT3G06490.1 37.931 116 69 2 62 176 18 131 5.00e-17 82.0
Msa0832670 AT1G56650.1 40.741 108 63 1 59 165 4 111 6.79e-17 80.5
Msa0832670 AT5G52260.1 44.000 100 53 2 68 165 17 115 1.86e-16 79.7
Msa0832670 AT5G59780.2 47.826 69 36 0 98 166 23 91 2.95e-16 77.8
Msa0832670 AT3G46130.3 47.826 69 36 0 98 166 13 81 4.38e-16 77.8
Msa0832670 AT3G46130.4 47.826 69 36 0 98 166 23 91 5.42e-16 77.4
Msa0832670 AT1G66390.1 40.741 108 63 1 59 165 4 111 5.43e-16 77.8
Msa0832670 AT5G40350.2 34.513 113 72 1 98 210 8 118 1.79e-15 74.3
Msa0832670 AT3G27810.2 42.045 88 45 1 98 185 7 88 8.75e-15 72.8
Msa0832670 AT5G49620.2 34.615 130 68 3 62 176 25 152 1.08e-14 75.1
Msa0832670 AT2G37630.1 37.113 97 58 1 65 158 4 100 3.63e-14 73.9
Msa0832670 AT2G13960.1 50.000 62 28 1 10 71 75 133 2.69e-13 67.8
Msa0832670 AT2G13960.1 48.333 60 31 0 64 123 74 133 8.01e-11 60.5
Msa0832670 AT2G13960.2 50.820 61 27 1 11 71 41 98 3.56e-13 66.2
Msa0832670 AT2G13960.2 49.153 59 30 0 65 123 40 98 7.78e-12 62.4
Msa0832670 AT5G14750.4 45.614 57 31 0 109 165 2 58 8.28e-13 66.2
Msa0832670 AT5G14750.2 45.614 57 31 0 109 165 2 58 8.28e-13 66.2
Msa0832670 AT1G22640.3 49.123 57 29 0 109 165 2 58 3.05e-12 65.9
Msa0832670 AT1G66380.3 45.588 68 37 0 98 165 11 78 4.97e-12 62.8
Msa0832670 AT3G23250.2 52.632 57 27 0 109 165 2 58 5.40e-12 65.9
Msa0832670 AT1G09770.1 39.759 83 49 1 68 150 10 91 1.42e-11 67.0
Msa0832670 AT1G14350.3 32.143 84 44 1 83 166 13 83 1.56e-11 66.2
Msa0832670 AT1G14350.4 32.143 84 44 1 83 166 13 83 1.56e-11 66.2

Find 87 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATTTACTGCCATATATT+TGG 0.169401 5_4:-5778647 None:intergenic
TCGCCATTTGGGAAAATTAT+AGG 0.193856 5_4:-5779492 None:intergenic
CTCTTTGAGCTACTCAAAAT+TGG 0.226900 5_4:+5779568 Msa0832670:CDS
AAGTTTCTTAGCACCGATTC+TGG 0.231780 5_4:-5779650 None:intergenic
CCTAAAGCAGGATGTGTAAT+TGG 0.235963 5_4:+5779788 Msa0832670:CDS
GGATATGCTTGCAACAAATA+TGG 0.257399 5_4:+5779433 Msa0832670:CDS
ATTCAACCAGTTACTTTGTT+TGG 0.258608 5_4:-5779195 None:intergenic
AGAACATTCCTTCTATTATA+AGG 0.263641 5_4:+5779687 Msa0832670:CDS
CATCATTCCATGGAATTTCT+AGG 0.264210 5_4:-5779854 None:intergenic
CTTTCTTACTAGCTCAATTA+AGG 0.277662 5_4:-5778151 None:intergenic
ACCAAATATATGGCAGTAAA+TGG 0.297606 5_4:+5778646 Msa0832670:CDS
CCAATTACACATCCTGCTTT+AGG 0.299396 5_4:-5779788 None:intergenic
ATTGAGCTAGTAAGAAAGTA+TGG 0.304423 5_4:+5778156 Msa0832670:CDS
GTCCCAAACACCTTCTAAAA+TGG 0.308159 5_4:+5779754 Msa0832670:CDS
AAGAGAAACCTTTCGCCATT+TGG 0.330050 5_4:-5779504 None:intergenic
ACAGATTCAAAGTTTATTGC+TGG 0.344818 5_4:+5779527 Msa0832670:CDS
TTTCTCCCAAACAAAGTAAC+TGG 0.348007 5_4:+5779189 Msa0832670:CDS
GCTCACTACTACCAAATATA+TGG 0.350001 5_4:+5778636 Msa0832670:CDS
AGAGAAACCTTTCGCCATTT+GGG 0.351659 5_4:-5779503 None:intergenic
GTAACTGTTTCCATCTCATT+TGG 0.352658 5_4:-5779353 None:intergenic
TTCAACCAGTTACTTTGTTT+GGG 0.356118 5_4:-5779194 None:intergenic
TTTCGAATAAACACTCTAGT+TGG 0.364940 5_4:-5779236 None:intergenic
TTTACAGCTGCATACTTCCC+TGG 0.377549 5_4:+5777933 Msa0832670:intron
ATGCTTCCGTAGAGGAATTT+CGG 0.382073 5_4:+5779258 Msa0832670:CDS
GAAATTGCAAGGGTTCTTCC+TGG 0.388868 5_4:+5778672 Msa0832670:CDS
GCTGAAGCTCAAAGTTTAGT+TGG 0.395689 5_4:+5779161 Msa0832670:CDS
TCATGCAGTGCTGACAAATA+TGG 0.415006 5_4:+5779728 Msa0832670:CDS
TATTAGAGAAGAGCAGAAAC+TGG 0.419411 5_4:-5779114 None:intergenic
AGTTTCTTAGCACCGATTCT+GGG 0.426239 5_4:-5779649 None:intergenic
GTATCAGATAAGTACCTTCC+AGG 0.429985 5_4:-5778690 None:intergenic
GGGTGCTTGGACGGAGGAGG+AGG 0.459044 5_4:+5778602 Msa0832670:CDS
TTCGAATAAACACTCTAGTT+GGG 0.460878 5_4:-5779235 None:intergenic
CGTGGCAGCTCCTAGGGCCT+CGG 0.462527 5_4:+5779301 Msa0832670:CDS
CATAGCATTTCATCATTCCA+TGG 0.466711 5_4:-5779864 None:intergenic
AGATGCATGATGGAAGCATC+TGG 0.475066 5_4:+5777612 Msa0832670:CDS
TCAGCACTGCATGACTTCCT+AGG 0.479875 5_4:-5779719 None:intergenic
ATGCTTCCATCGCTGGCAAA+AGG 0.480207 5_4:+5777971 Msa0832670:CDS
AATAAAACCAGCACATGGTT+CGG 0.485028 5_4:+5779133 Msa0832670:CDS
ACATTGAATGCTTCCATCGC+TGG 0.487314 5_4:+5777964 Msa0832670:CDS
ATTCCTTCCTAGAAATTCCA+TGG 0.492413 5_4:+5779847 Msa0832670:CDS
AATAGAAGGAATGTTCTCAT+AGG 0.496498 5_4:-5779681 None:intergenic
TTACAGCTGCATACTTCCCT+GGG 0.497263 5_4:+5777934 Msa0832670:intron
CTTTCCGATACGACCTGGCA+TGG 0.501823 5_4:-5778208 None:intergenic
GAAAGTATGGTTTCAAGAGA+TGG 0.502613 5_4:+5778169 Msa0832670:CDS
ATGGAATTTCTAGGAAGGAA+TGG 0.513874 5_4:-5779845 None:intergenic
ATGTATTTATCTGCGAAGGT+AGG 0.514030 5_4:-5779398 None:intergenic
AGAAGAGCAGAAACTGGAAG+TGG 0.515412 5_4:-5779108 None:intergenic
GGAAGCATCTGGAAAAGTAT+AGG 0.516036 5_4:+5777623 Msa0832670:CDS
AAGTAACAGTACTGGAAGAA+AGG 0.519260 5_4:-5779463 None:intergenic
AAATCCATGCCAGGTCGTAT+CGG 0.520235 5_4:+5778204 Msa0832670:CDS
TGTATTTATCTGCGAAGGTA+GGG 0.525550 5_4:-5779397 None:intergenic
GGTCAATTTACCAAATGAGA+TGG 0.526258 5_4:+5779343 Msa0832670:CDS
TAAATACATGAACTCATCGT+TGG 0.526619 5_4:+5779412 Msa0832670:CDS
GAAGGAATGGAACAAATCCT+TGG 0.526705 5_4:-5779832 None:intergenic
ACATCCATGTCACATCTAGT+AGG 0.527575 5_4:-5779083 None:intergenic
GAGGAAAGTTCAAGTTGGAA+TGG 0.528710 5_4:+5779601 Msa0832670:CDS
CATTCAATGTCTGTTCGCCC+AGG 0.528988 5_4:-5777951 None:intergenic
TTATAAGGAAAAGATCTCCT+AGG 0.534381 5_4:+5779702 Msa0832670:CDS
AAGCAACGTGAGCCCAGAAT+CGG 0.535475 5_4:+5779637 Msa0832670:CDS
GCTATAACCGAACCATGTGC+TGG 0.538633 5_4:-5779140 None:intergenic
GGCCTCGTAAGTAACAGTAC+TGG 0.541786 5_4:-5779471 None:intergenic
TTTAATGATTCAGGAGGATG+AGG 0.543461 5_4:+5778128 Msa0832670:intron
AAAGGGTGCTTGGACGGAGG+AGG 0.550944 5_4:+5778599 Msa0832670:CDS
CATGAGAGGAAAGTTCAAGT+TGG 0.553845 5_4:+5779596 Msa0832670:CDS
GTAAATGGTCAGAAATTGCA+AGG 0.561504 5_4:+5778661 Msa0832670:CDS
TTTATTGCGAAATCCATGCC+AGG 0.564481 5_4:+5778195 Msa0832670:CDS
CTGCGAAGGTAGGGTTGGCA+TGG 0.567546 5_4:-5779388 None:intergenic
GCTATCACAACTCCTAAAGC+AGG 0.569904 5_4:+5779776 Msa0832670:CDS
GTTCATGTATTTATCTGCGA+AGG 0.570468 5_4:-5779402 None:intergenic
GAGATAGTCAAGATGCATGA+TGG 0.571639 5_4:+5777602 Msa0832670:CDS
CGGAATCTGGACAGAAGAAG+AGG 0.572625 5_4:+5777318 Msa0832670:CDS
TTGCAAGGGTTCTTCCTGGA+AGG 0.579944 5_4:+5778676 Msa0832670:CDS
ATCAGACCGAAATTCCTCTA+CGG 0.589229 5_4:-5779264 None:intergenic
TGGAAAAGTATAGGTGGATG+CGG 0.589791 5_4:+5777632 Msa0832670:CDS
TTTATCTGCGAAGGTAGGGT+TGG 0.592406 5_4:-5779393 None:intergenic
CATTGCTTTCCGATACGACC+TGG 0.594119 5_4:-5778213 None:intergenic
TCGGAAAGCAATGTCGAGAG+AGG 0.597044 5_4:+5778223 Msa0832670:CDS
TTCCAGTACTGTTACTTACG+AGG 0.600409 5_4:+5779469 Msa0832670:CDS
ATTCCATGGAATTTCTAGGA+AGG 0.603209 5_4:-5779850 None:intergenic
CAAAATTGGCTAATCATGAG+AGG 0.603609 5_4:+5779582 Msa0832670:CDS
AGCATCTGGAAAAGTATAGG+TGG 0.605541 5_4:+5777626 Msa0832670:CDS
ATTCAATGTCTGTTCGCCCA+GGG 0.615954 5_4:-5777950 None:intergenic
GATAATTTAAAACTCAACCA+AGG 0.617456 5_4:+5779815 Msa0832670:CDS
TATTCGAAATGCTTCCGTAG+AGG 0.625592 5_4:+5779250 Msa0832670:CDS
ATCACCTACTAGATGTGACA+TGG 0.666242 5_4:+5779079 Msa0832670:CDS
TCTCTAATAAAACCAGCACA+TGG 0.683247 5_4:+5779128 Msa0832670:CDS
TAAATGGTCAGAAATTGCAA+GGG 0.701805 5_4:+5778662 Msa0832670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTACAAATTTTAACTATTAT+TGG + chr5_4:5777437-5777456 Msa0832670:intron 15.0%
!! ATTCATAAATAATATTCTGT+AGG + chr5_4:5778381-5778400 Msa0832670:intron 15.0%
!!! TCATTTTATTGATATTTATG+CGG - chr5_4:5778772-5778791 None:intergenic 15.0%
!! AACATAATAAATACCACAAA+AGG - chr5_4:5777506-5777525 None:intergenic 20.0%
!! TTTGTGGTATTTATTATGTT+AGG + chr5_4:5777506-5777525 Msa0832670:intron 20.0%
!!! TTATGCTATATTTTATCATG+AGG - chr5_4:5777811-5777830 None:intergenic 20.0%
!!! CTTTTTAAGAAACATACTTA+TGG - chr5_4:5778510-5778529 None:intergenic 20.0%
!!! CATTTTATTGATATTTATGC+GGG - chr5_4:5778771-5778790 None:intergenic 20.0%
!!! TTTCTGTCTTTGATTTTTTA+GGG - chr5_4:5778899-5778918 None:intergenic 20.0%
!!! TTTTCTGTCTTTGATTTTTT+AGG - chr5_4:5778900-5778919 None:intergenic 20.0%
!! ACAATGCTATAAAAAATCAT+TGG + chr5_4:5779027-5779046 Msa0832670:CDS 20.0%
!! TAATGAGTTTAACTGCATTT+TGG + chr5_4:5777744-5777763 Msa0832670:intron 25.0%
!! AATGAGTTTAACTGCATTTT+GGG + chr5_4:5777745-5777764 Msa0832670:intron 25.0%
! GTTTATAACTCAAACTAATC+TGG + chr5_4:5777895-5777914 Msa0832670:intron 25.0%
! ATGATCTTGTAAAAAGATCA+TGG + chr5_4:5778003-5778022 Msa0832670:CDS 25.0%
!!! ACAAAAGTTGTCATTTTCAA+AGG - chr5_4:5778348-5778367 None:intergenic 25.0%
! TTGAAGCATGTATTTATAGA+GGG - chr5_4:5778746-5778765 None:intergenic 25.0%
!! TTTGAAGCATGTATTTATAG+AGG - chr5_4:5778747-5778766 None:intergenic 25.0%
! ATCTAATTCGTTGTATCATA+TGG + chr5_4:5778990-5779009 Msa0832670:intron 25.0%
! TCTAATTCGTTGTATCATAT+GGG + chr5_4:5778991-5779010 Msa0832670:intron 25.0%
! AGAACATTCCTTCTATTATA+AGG + chr5_4:5779687-5779706 Msa0832670:CDS 25.0%
!! GATCTTTTCCTTATAATAGA+AGG - chr5_4:5779698-5779717 None:intergenic 25.0%
!! GATAATTTAAAACTCAACCA+AGG + chr5_4:5779815-5779834 Msa0832670:CDS 25.0%
!! TTGTCTTTGTTATCCTTTTG+TGG + chr5_4:5777490-5777509 Msa0832670:intron 30.0%
! ATTTTGCAATCTCATGACTA+TGG + chr5_4:5777557-5777576 Msa0832670:intron 30.0%
AACTAATCTGGTTGTTCAAT+TGG + chr5_4:5777907-5777926 Msa0832670:intron 30.0%
TGTAAAAAGATCATGGACAA+AGG + chr5_4:5778010-5778029 Msa0832670:CDS 30.0%
TTTATTGTGCCAATATGTGT+TGG + chr5_4:5778069-5778088 Msa0832670:intron 30.0%
!! GCATTTTAACCAACACATAT+TGG - chr5_4:5778081-5778100 None:intergenic 30.0%
CTTTCTTACTAGCTCAATTA+AGG - chr5_4:5778154-5778173 None:intergenic 30.0%
ATTGAGCTAGTAAGAAAGTA+TGG + chr5_4:5778156-5778175 Msa0832670:CDS 30.0%
TACTTCCATCTCTTGAAATT+AGG - chr5_4:5778275-5778294 None:intergenic 30.0%
! TTCTATGCTTTGAATCAGAT+TGG + chr5_4:5778419-5778438 Msa0832670:intron 30.0%
TTACCTAGTAGTTCATATTC+TGG - chr5_4:5778540-5778559 None:intergenic 30.0%
AACTACTAGGTAATCATTTC+AGG + chr5_4:5778547-5778566 Msa0832670:intron 30.0%
ACCAAATATATGGCAGTAAA+TGG + chr5_4:5778646-5778665 Msa0832670:CDS 30.0%
ACCATTTACTGCCATATATT+TGG - chr5_4:5778650-5778669 None:intergenic 30.0%
TAAATGGTCAGAAATTGCAA+GGG + chr5_4:5778662-5778681 Msa0832670:CDS 30.0%
!!! ACTCGAAAGTGATTTTTTTG+AGG + chr5_4:5778798-5778817 Msa0832670:intron 30.0%
! TTCAACCAGTTACTTTGTTT+GGG - chr5_4:5779197-5779216 None:intergenic 30.0%
! ATTCAACCAGTTACTTTGTT+TGG - chr5_4:5779198-5779217 None:intergenic 30.0%
TTCGAATAAACACTCTAGTT+GGG - chr5_4:5779238-5779257 None:intergenic 30.0%
TTTCGAATAAACACTCTAGT+TGG - chr5_4:5779239-5779258 None:intergenic 30.0%
! CGGTCTGATAAAAACATTTT+TGG + chr5_4:5779278-5779297 Msa0832670:CDS 30.0%
!!! TGATAAAAACATTTTTGGCG+TGG + chr5_4:5779283-5779302 Msa0832670:CDS 30.0%
GGAAAAAAGTGAAAGAAGAT+TGG + chr5_4:5779322-5779341 Msa0832670:CDS 30.0%
TAAATACATGAACTCATCGT+TGG + chr5_4:5779412-5779431 Msa0832670:CDS 30.0%
ACAGATTCAAAGTTTATTGC+TGG + chr5_4:5779527-5779546 Msa0832670:CDS 30.0%
AATAGAAGGAATGTTCTCAT+AGG - chr5_4:5779684-5779703 None:intergenic 30.0%
TTATAAGGAAAAGATCTCCT+AGG + chr5_4:5779702-5779721 Msa0832670:CDS 30.0%
TCGCAAATTAGCTCGAAAAA+CGG + chr5_4:5777298-5777317 Msa0832670:CDS 35.0%
CTTAACTGTGACGTTTGATT+TGG + chr5_4:5777383-5777402 Msa0832670:intron 35.0%
!! TGTGACGTTTGATTTGGTTA+AGG + chr5_4:5777389-5777408 Msa0832670:intron 35.0%
!! TTTGATTTGGTTAAGGCTCA+AGG + chr5_4:5777396-5777415 Msa0832670:intron 35.0%
!! TTGATTTGGTTAAGGCTCAA+GGG + chr5_4:5777397-5777416 Msa0832670:intron 35.0%
AAAAAGATCATGGACAAAGG+AGG + chr5_4:5778013-5778032 Msa0832670:CDS 35.0%
!! TGTGTTGGTTAAAATGCTGA+TGG + chr5_4:5778084-5778103 Msa0832670:intron 35.0%
CCTGAATCATTAAATGCAGA+AGG - chr5_4:5778122-5778141 None:intergenic 35.0%
CCTTCTGCATTTAATGATTC+AGG + chr5_4:5778119-5778138 Msa0832670:intron 35.0%
TCTGCATTTAATGATTCAGG+AGG + chr5_4:5778122-5778141 Msa0832670:intron 35.0%
TTTAATGATTCAGGAGGATG+AGG + chr5_4:5778128-5778147 Msa0832670:intron 35.0%
! GAAAGTATGGTTTCAAGAGA+TGG + chr5_4:5778169-5778188 Msa0832670:CDS 35.0%
!! ATTCTGTAGGCTTTTTCTGT+TGG + chr5_4:5778394-5778413 Msa0832670:intron 35.0%
TTGCCAGAATATGAACTACT+AGG + chr5_4:5778534-5778553 Msa0832670:intron 35.0%
TACTAGGTAATCATTTCAGG+TGG + chr5_4:5778550-5778569 Msa0832670:intron 35.0%
CTTGATCCCGCTATAAAAAA+GGG + chr5_4:5778582-5778601 Msa0832670:CDS 35.0%
!! TATAAAAAAGGGTGCTTGGA+CGG + chr5_4:5778593-5778612 Msa0832670:CDS 35.0%
GCTCACTACTACCAAATATA+TGG + chr5_4:5778636-5778655 Msa0832670:CDS 35.0%
GTAAATGGTCAGAAATTGCA+AGG + chr5_4:5778661-5778680 Msa0832670:CDS 35.0%
! TTTTGAACACACTTTTGGTG+AGG - chr5_4:5778829-5778848 None:intergenic 35.0%
! GCATCTTTTGAACACACTTT+TGG - chr5_4:5778834-5778853 None:intergenic 35.0%
!!! GTCTTTGATTTTTTAGGGAG+AGG - chr5_4:5778894-5778913 None:intergenic 35.0%
! TTTTATAGCATTGTCACTCC+TGG - chr5_4:5779021-5779040 None:intergenic 35.0%
CTCACTGAAAAAGAAGTCAT+CGG + chr5_4:5779055-5779074 Msa0832670:CDS 35.0%
TATTAGAGAAGAGCAGAAAC+TGG - chr5_4:5779117-5779136 None:intergenic 35.0%
TCTCTAATAAAACCAGCACA+TGG + chr5_4:5779128-5779147 Msa0832670:CDS 35.0%
AATAAAACCAGCACATGGTT+CGG + chr5_4:5779133-5779152 Msa0832670:CDS 35.0%
TTTCTCCCAAACAAAGTAAC+TGG + chr5_4:5779189-5779208 Msa0832670:CDS 35.0%
!!! TCTTCTTTCACTTTTTTCCG+AGG - chr5_4:5779321-5779340 None:intergenic 35.0%
GGTCAATTTACCAAATGAGA+TGG + chr5_4:5779343-5779362 Msa0832670:CDS 35.0%
GTAACTGTTTCCATCTCATT+TGG - chr5_4:5779356-5779375 None:intergenic 35.0%
TGTATTTATCTGCGAAGGTA+GGG - chr5_4:5779400-5779419 None:intergenic 35.0%
ATGTATTTATCTGCGAAGGT+AGG - chr5_4:5779401-5779420 None:intergenic 35.0%
GTTCATGTATTTATCTGCGA+AGG - chr5_4:5779405-5779424 None:intergenic 35.0%
GGATATGCTTGCAACAAATA+TGG + chr5_4:5779433-5779452 Msa0832670:CDS 35.0%
! AAGTAACAGTACTGGAAGAA+AGG - chr5_4:5779466-5779485 None:intergenic 35.0%
! AGGCCTATAATTTTCCCAAA+TGG + chr5_4:5779489-5779508 Msa0832670:CDS 35.0%
TCGCCATTTGGGAAAATTAT+AGG - chr5_4:5779495-5779514 None:intergenic 35.0%
! TAATTTTCCCAAATGGCGAA+AGG + chr5_4:5779496-5779515 Msa0832670:CDS 35.0%
!! CAATTTTGAGTAGCTCAAAG+AGG - chr5_4:5779570-5779589 None:intergenic 35.0%
CTCTTTGAGCTACTCAAAAT+TGG + chr5_4:5779568-5779587 Msa0832670:CDS 35.0%
CAAAATTGGCTAATCATGAG+AGG + chr5_4:5779582-5779601 Msa0832670:CDS 35.0%
!!! AGCCATTTTAGAAGGTGTTT+GGG - chr5_4:5779759-5779778 None:intergenic 35.0%
!!! TAGCCATTTTAGAAGGTGTT+TGG - chr5_4:5779760-5779779 None:intergenic 35.0%
!! GTTGTGATAGCCATTTTAGA+AGG - chr5_4:5779767-5779786 None:intergenic 35.0%
! ATGGAATTTCTAGGAAGGAA+TGG - chr5_4:5779848-5779867 None:intergenic 35.0%
ATTCCTTCCTAGAAATTCCA+TGG + chr5_4:5779847-5779866 Msa0832670:CDS 35.0%
! ATTCCATGGAATTTCTAGGA+AGG - chr5_4:5779853-5779872 None:intergenic 35.0%
TTAGCTCGAAAAACGGAATC+TGG + chr5_4:5777305-5777324 Msa0832670:CDS 40.0%
ATCTCATGACTATGGCAAAC+AGG + chr5_4:5777565-5777584 Msa0832670:intron 40.0%
GAGATAGTCAAGATGCATGA+TGG + chr5_4:5777602-5777621 Msa0832670:CDS 40.0%
!! GGAAGCATCTGGAAAAGTAT+AGG + chr5_4:5777623-5777642 Msa0832670:CDS 40.0%
! AGCATCTGGAAAAGTATAGG+TGG + chr5_4:5777626-5777645 Msa0832670:CDS 40.0%
! TGGAAAAGTATAGGTGGATG+CGG + chr5_4:5777632-5777651 Msa0832670:CDS 40.0%
TGCTTCTCTCAACATTTCAG+TGG - chr5_4:5777778-5777797 None:intergenic 40.0%
TTTATTGCGAAATCCATGCC+AGG + chr5_4:5778195-5778214 Msa0832670:CDS 40.0%
CAGAGCCTAATTTCAAGAGA+TGG + chr5_4:5778267-5778286 Msa0832670:intron 40.0%
!!! CCTTTTTTATAGCGGGATCA+AGG - chr5_4:5778584-5778603 None:intergenic 40.0%
CCTTGATCCCGCTATAAAAA+AGG + chr5_4:5778581-5778600 Msa0832670:CDS 40.0%
!!! CAAGCACCCTTTTTTATAGC+GGG - chr5_4:5778591-5778610 None:intergenic 40.0%
!!! CCAAGCACCCTTTTTTATAG+CGG - chr5_4:5778592-5778611 None:intergenic 40.0%
GTATCAGATAAGTACCTTCC+AGG - chr5_4:5778693-5778712 None:intergenic 40.0%
AGCATGTATTTATAGAGGGC+AGG - chr5_4:5778742-5778761 None:intergenic 40.0%
GAGGTTGTGACAGAACTAAT+AGG - chr5_4:5778875-5778894 None:intergenic 40.0%
TATAAGTGCATTCCTGAAGC+AGG + chr5_4:5778951-5778970 Msa0832670:intron 40.0%
TGAATATATGTGCCTGCTTC+AGG - chr5_4:5778966-5778985 None:intergenic 40.0%
TTGTATCATATGGGTAAGCC+AGG + chr5_4:5779000-5779019 Msa0832670:intron 40.0%
ATCACCTACTAGATGTGACA+TGG + chr5_4:5779079-5779098 Msa0832670:CDS 40.0%
ACATCCATGTCACATCTAGT+AGG - chr5_4:5779086-5779105 None:intergenic 40.0%
GCTGAAGCTCAAAGTTTAGT+TGG + chr5_4:5779161-5779180 Msa0832670:CDS 40.0%
TATTCGAAATGCTTCCGTAG+AGG + chr5_4:5779250-5779269 Msa0832670:CDS 40.0%
ATGCTTCCGTAGAGGAATTT+CGG + chr5_4:5779258-5779277 Msa0832670:CDS 40.0%
ATCAGACCGAAATTCCTCTA+CGG - chr5_4:5779267-5779286 None:intergenic 40.0%
! TTCCAGTACTGTTACTTACG+AGG + chr5_4:5779469-5779488 Msa0832670:CDS 40.0%
AGAGAAACCTTTCGCCATTT+GGG - chr5_4:5779506-5779525 None:intergenic 40.0%
AAGAGAAACCTTTCGCCATT+TGG - chr5_4:5779507-5779526 None:intergenic 40.0%
CATGAGAGGAAAGTTCAAGT+TGG + chr5_4:5779596-5779615 Msa0832670:CDS 40.0%
!! GAGGAAAGTTCAAGTTGGAA+TGG + chr5_4:5779601-5779620 Msa0832670:CDS 40.0%
!! AGTTTCTTAGCACCGATTCT+GGG - chr5_4:5779652-5779671 None:intergenic 40.0%
!! AAGTTTCTTAGCACCGATTC+TGG - chr5_4:5779653-5779672 None:intergenic 40.0%
!! TCATGCAGTGCTGACAAATA+TGG + chr5_4:5779728-5779747 Msa0832670:CDS 40.0%
! GTCCCAAACACCTTCTAAAA+TGG + chr5_4:5779754-5779773 Msa0832670:CDS 40.0%
CCAATTACACATCCTGCTTT+AGG - chr5_4:5779791-5779810 None:intergenic 40.0%
CCTAAAGCAGGATGTGTAAT+TGG + chr5_4:5779788-5779807 Msa0832670:CDS 40.0%
GAAGGAATGGAACAAATCCT+TGG - chr5_4:5779835-5779854 None:intergenic 40.0%
!! AGATGCATGATGGAAGCATC+TGG + chr5_4:5777612-5777631 Msa0832670:CDS 45.0%
TTTACAGCTGCATACTTCCC+TGG + chr5_4:5777933-5777952 Msa0832670:intron 45.0%
TTACAGCTGCATACTTCCCT+GGG + chr5_4:5777934-5777953 Msa0832670:intron 45.0%
ATTCAATGTCTGTTCGCCCA+GGG - chr5_4:5777953-5777972 None:intergenic 45.0%
ACATTGAATGCTTCCATCGC+TGG + chr5_4:5777964-5777983 Msa0832670:CDS 45.0%
AAATCCATGCCAGGTCGTAT+CGG + chr5_4:5778204-5778223 Msa0832670:CDS 45.0%
AAAGCAATGTCGAGAGAGGT+AGG + chr5_4:5778227-5778246 Msa0832670:intron 45.0%
!! CCGCTATAAAAAAGGGTGCT+TGG + chr5_4:5778589-5778608 Msa0832670:CDS 45.0%
GAAATTGCAAGGGTTCTTCC+TGG + chr5_4:5778672-5778691 Msa0832670:CDS 45.0%
AGAAGAGCAGAAACTGGAAG+TGG - chr5_4:5779111-5779130 None:intergenic 45.0%
TTTATCTGCGAAGGTAGGGT+TGG - chr5_4:5779396-5779415 None:intergenic 45.0%
GCTATCACAACTCCTAAAGC+AGG + chr5_4:5779776-5779795 Msa0832670:CDS 45.0%
CGGAATCTGGACAGAAGAAG+AGG + chr5_4:5777318-5777337 Msa0832670:CDS 50.0%
CATTCAATGTCTGTTCGCCC+AGG - chr5_4:5777954-5777973 None:intergenic 50.0%
ATGCTTCCATCGCTGGCAAA+AGG + chr5_4:5777971-5777990 Msa0832670:CDS 50.0%
! TCGAAACCTTTTGCCAGCGA+TGG - chr5_4:5777980-5777999 None:intergenic 50.0%
CATTGCTTTCCGATACGACC+TGG - chr5_4:5778216-5778235 None:intergenic 50.0%
TCGGAAAGCAATGTCGAGAG+AGG + chr5_4:5778223-5778242 Msa0832670:CDS 50.0%
!! AAAAAAGGGTGCTTGGACGG+AGG + chr5_4:5778596-5778615 Msa0832670:CDS 50.0%
TTGCAAGGGTTCTTCCTGGA+AGG + chr5_4:5778676-5778695 Msa0832670:CDS 50.0%
GCTATAACCGAACCATGTGC+TGG - chr5_4:5779143-5779162 None:intergenic 50.0%
!!! TCACTTTTTTCCGAGGCCCT+AGG - chr5_4:5779314-5779333 None:intergenic 50.0%
GGCCTCGTAAGTAACAGTAC+TGG - chr5_4:5779474-5779493 None:intergenic 50.0%
AAGCAACGTGAGCCCAGAAT+CGG + chr5_4:5779637-5779656 Msa0832670:CDS 50.0%
TCAGCACTGCATGACTTCCT+AGG - chr5_4:5779722-5779741 None:intergenic 50.0%
CTTTCCGATACGACCTGGCA+TGG - chr5_4:5778211-5778230 None:intergenic 55.0%
!! TTTTTGGCGTGGCAGCTCCT+AGG + chr5_4:5779294-5779313 Msa0832670:CDS 55.0%
! TTTTGGCGTGGCAGCTCCTA+GGG + chr5_4:5779295-5779314 Msa0832670:CDS 55.0%
!! AAAGGGTGCTTGGACGGAGG+AGG + chr5_4:5778599-5778618 Msa0832670:CDS 60.0%
! CTGCGAAGGTAGGGTTGGCA+TGG - chr5_4:5779391-5779410 None:intergenic 60.0%
GGGTGCTTGGACGGAGGAGG+AGG + chr5_4:5778602-5778621 Msa0832670:CDS 70.0%
CGTGGCAGCTCCTAGGGCCT+CGG + chr5_4:5779301-5779320 Msa0832670:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 5777289 5779874 5777289 ID=Msa0832670;Name=Msa0832670
chr5_4 mRNA 5777289 5779874 5777289 ID=Msa0832670-mRNA-1;Parent=Msa0832670;Name=Msa0832670-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0.2|0|1|1|0.83|6|0|432
chr5_4 exon 5777289 5777339 5777289 ID=Msa0832670-mRNA-1:exon:2446;Parent=Msa0832670-mRNA-1
chr5_4 exon 5777587 5777653 5777587 ID=Msa0832670-mRNA-1:exon:2447;Parent=Msa0832670-mRNA-1
chr5_4 exon 5777940 5778034 5777940 ID=Msa0832670-mRNA-1:exon:2448;Parent=Msa0832670-mRNA-1
chr5_4 exon 5778141 5778244 5778141 ID=Msa0832670-mRNA-1:exon:2449;Parent=Msa0832670-mRNA-1
chr5_4 exon 5778569 5778697 5778569 ID=Msa0832670-mRNA-1:exon:2450;Parent=Msa0832670-mRNA-1
chr5_4 exon 5779022 5779874 5779022 ID=Msa0832670-mRNA-1:exon:2451;Parent=Msa0832670-mRNA-1
chr5_4 CDS 5777289 5777339 5777289 ID=Msa0832670-mRNA-1:cds;Parent=Msa0832670-mRNA-1
chr5_4 CDS 5777587 5777653 5777587 ID=Msa0832670-mRNA-1:cds;Parent=Msa0832670-mRNA-1
chr5_4 CDS 5777940 5778034 5777940 ID=Msa0832670-mRNA-1:cds;Parent=Msa0832670-mRNA-1
chr5_4 CDS 5778141 5778244 5778141 ID=Msa0832670-mRNA-1:cds;Parent=Msa0832670-mRNA-1
chr5_4 CDS 5778569 5778697 5778569 ID=Msa0832670-mRNA-1:cds;Parent=Msa0832670-mRNA-1
chr5_4 CDS 5779022 5779874 5779022 ID=Msa0832670-mRNA-1:cds;Parent=Msa0832670-mRNA-1
Gene Sequence

>Msa0832670

AAAATAAAATCGCAAATTAGCTCGAAAAACGGAATCTGGACAGAAGAAGAGGATAATCTTTTGATTGAGATAGTCAAGATGCATGATGGAAGCATCTGGAAAAGTATAGGTGGATGCGCTGCATACTTCCCTGGGCGAACAGACATTGAATGCTTCCATCGCTGGCAAAAGGTTTCGAATCATGATCTTGTAAAAAGATCATGGACAAAGGAGGAGGATGAGGCCTTAATTGAGCTAGTAAGAAAGTATGGTTTCAAGAGATGGTCTTTTATTGCGAAATCCATGCCAGGTCGTATCGGAAAGCAATGTCGAGAGAGGTGGCATAATAACCTTGATCCCGCTATAAAAAAGGGTGCTTGGACGGAGGAGGAGGAGTCAATACTTGCTCACTACTACCAAATATATGGCAGTAAATGGTCAGAAATTGCAAGGGTTCTTCCTGGAAGGAGTGACAATGCTATAAAAAATCATTGGAACAGCTCACTGAAAAAGAAGTCATCGGCATCACCTACTAGATGTGACATGGATGTTTCCACTTCCAGTTTCTGCTCTTCTCTAATAAAACCAGCACATGGTTCGGTTATAGCTGAAGCTCAAAGTTTAGTTGGAATAGTTTCTCCCAAACAAAGTAACTGGTTGAATCACAGTGCTGATAGCTTCCCAACTAGAGTGTTTATTCGAAATGCTTCCGTAGAGGAATTTCGGTCTGATAAAAACATTTTTGGCGTGGCAGCTCCTAGGGCCTCGGAAAAAAGTGAAAGAAGATTGGTCAATTTACCAAATGAGATGGAAACAGTTACATGCTTCAAAGACCATGCCAACCCTACCTTCGCAGATAAATACATGAACTCATCGTTGGATATGCTTGCAACAAATATGGATTGTTTCCTTTCTTCCAGTACTGTTACTTACGAGGCCTATAATTTTCCCAAATGGCGAAAGGTTTCTCTTACAGATTCAAAGTTTATTGCTGGTAATGAATCTGATAGTTCCTCTTTGAGCTACTCAAAATTGGCTAATCATGAGAGGAAAGTTCAAGTTGGAATGGAAAGCAATAACAAAAGCAACGTGAGCCCAGAATCGGTGCTAAGAAACTTAGCAATGACCTATGAGAACATTCCTTCTATTATAAGGAAAAGATCTCCTAGGAAGTCATGCAGTGCTGACAAATATGGCAAGTCCCAAACACCTTCTAAAATGGCTATCACAACTCCTAAAGCAGGATGTGTAATTGGTTTCGATAATTTAAAACTCAACCAAGGATTTGTTCCATTCCTTCCTAGAAATTCCATGGAATGA
Protein sequence

>Msa0832670

KIKSQISSKNGIWTEEEDNLLIEIVKMHDGSIWKSIGGCAAYFPGRTDIECFHRWQKVSNHDLVKRSWTKEEDEALIELVRKYGFKRWSFIAKSMPGRIGKQCRERWHNNLDPAIKKGAWTEEEESILAHYYQIYGSKWSEIARVLPGRSDNAIKNHWNSSLKKKSSASPTRCDMDVSTSSFCSSLIKPAHGSVIAEAQSLVGIVSPKQSNWLNHSADSFPTRVFIRNASVEEFRSDKNIFGVAAPRASEKSERRLVNLPNEMETVTCFKDHANPTFADKYMNSSLDMLATNMDCFLSSSTVTYEAYNFPKWRKVSLTDSKFIAGNESDSSSLSYSKLANHERKVQVGMESNNKSNVSPESVLRNLAMTYENIPSIIRKRSPRKSCSADKYGKSQTPSKMAITTPKAGCVIGFDNLKLNQGFVPFLPRNSME*