Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0841460 | XP_003612847.1 | 78.846 | 520 | 41 | 4 | 1 | 451 | 19 | 538 | 0.0 | 793 |
Msa0841460 | XP_003612847.1 | 82.187 | 567 | 37 | 5 | 451 | 953 | 22 | 588 | 0.0 | 902 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0841460 | sp|Q9JI90|RNF14_MOUSE | 26.386 | 451 | 231 | 13 | 91 | 450 | 7 | 447 | 8.53e-32 | 134 |
Msa0841460 | sp|Q9JI90|RNF14_MOUSE | 24.890 | 454 | 233 | 12 | 555 | 909 | 7 | 451 | 3.36e-27 | 120 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0841460 | G7KDN8 | 78.846 | 520 | 41 | 4 | 1 | 451 | 19 | 538 | 0.0 | 793 |
Msa0841460 | G7KDN8 | 82.187 | 567 | 37 | 5 | 451 | 953 | 22 | 588 | 0.0 | 902 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0803100 | Msa0841460 | 0.925833 | 1.072659e-90 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0841460 | MtrunA17_Chr5g0410911 | 82.187 | 567 | 37 | 5 | 451 | 953 | 22 | 588 | 0.0 | 902 |
Msa0841460 | MtrunA17_Chr5g0410911 | 78.846 | 520 | 41 | 4 | 1 | 451 | 19 | 538 | 0.0 | 793 |
Msa0841460 | MtrunA17_Chr3g0103941 | 29.534 | 193 | 105 | 7 | 260 | 439 | 64 | 238 | 3.32e-14 | 73.9 |
Msa0841460 | MtrunA17_Chr3g0104441 | 28.502 | 207 | 107 | 8 | 252 | 439 | 47 | 231 | 4.93e-14 | 73.6 |
Msa0841460 | MtrunA17_Chr4g0031451 | 25.234 | 214 | 125 | 10 | 251 | 451 | 5 | 196 | 3.62e-13 | 69.3 |
Msa0841460 | MtrunA17_Chr2g0301841 | 27.041 | 196 | 112 | 7 | 255 | 438 | 109 | 285 | 5.89e-13 | 70.9 |
Msa0841460 | MtrunA17_Chr3g0103931 | 28.497 | 193 | 106 | 7 | 260 | 439 | 68 | 241 | 1.71e-12 | 68.9 |
Msa0841460 | MtrunA17_Chr3g0103851 | 27.500 | 200 | 111 | 7 | 255 | 439 | 260 | 440 | 2.24e-12 | 70.5 |
Msa0841460 | MtrunA17_Chr3g0103961 | 26.087 | 207 | 119 | 8 | 255 | 449 | 68 | 252 | 3.11e-12 | 68.2 |
Msa0841460 | MtrunA17_Chr3g0104451 | 25.616 | 203 | 117 | 5 | 252 | 439 | 43 | 226 | 3.69e-12 | 67.4 |
Msa0841460 | MtrunA17_Chr4g0034371 | 22.039 | 304 | 179 | 9 | 243 | 518 | 126 | 399 | 8.64e-12 | 68.9 |
Msa0841460 | MtrunA17_Chr3g0103871 | 26.131 | 199 | 115 | 8 | 243 | 426 | 62 | 243 | 5.25e-11 | 64.3 |
Msa0841460 | MtrunA17_Chr2g0301761 | 26.257 | 179 | 102 | 6 | 260 | 426 | 98 | 258 | 6.32e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0841460 | AT1G32340.1 | 47.228 | 487 | 186 | 6 | 533 | 953 | 165 | 646 | 3.24e-150 | 461 |
Msa0841460 | AT1G32340.1 | 48.611 | 432 | 166 | 4 | 69 | 450 | 165 | 590 | 1.48e-139 | 434 |
Msa0841460 | AT3G14250.1 | 26.606 | 218 | 128 | 7 | 243 | 444 | 95 | 296 | 7.21e-18 | 85.9 |
Msa0841460 | AT4G34370.1 | 22.881 | 354 | 214 | 13 | 243 | 573 | 123 | 440 | 2.43e-15 | 80.9 |
Msa0841460 | AT3G27710.1 | 22.327 | 318 | 193 | 10 | 238 | 533 | 116 | 401 | 2.44e-13 | 74.3 |
Msa0841460 | AT3G53690.1 | 24.638 | 207 | 121 | 7 | 260 | 453 | 133 | 317 | 2.19e-12 | 69.7 |
Msa0841460 | AT2G16090.5 | 22.443 | 352 | 214 | 15 | 245 | 573 | 66 | 381 | 1.34e-11 | 68.6 |
Msa0841460 | AT2G16090.2 | 22.443 | 352 | 214 | 15 | 245 | 573 | 66 | 381 | 1.52e-11 | 68.6 |
Msa0841460 | AT2G16090.3 | 22.443 | 352 | 214 | 15 | 245 | 573 | 126 | 441 | 1.75e-11 | 68.6 |
Msa0841460 | AT2G16090.4 | 23.077 | 312 | 182 | 14 | 245 | 533 | 126 | 402 | 1.94e-11 | 68.6 |
Msa0841460 | AT2G16090.1 | 23.077 | 312 | 182 | 14 | 245 | 533 | 126 | 402 | 2.03e-11 | 68.2 |
Find 172 sgRNAs with CRISPR-Local
Find 956 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATAATAATGATATTGATTT+TGG | 0.119826 | 5_4:-17763029 | Msa0841460:CDS |
AACATTCATGCAATTCTTTA+AGG | 0.130448 | 5_4:+17761490 | None:intergenic |
AACATTCATGCAATTCTTTA+AGG | 0.130448 | 5_4:+17772678 | None:intergenic |
TCAAAATTTATCTCGTTTAA+AGG | 0.147143 | 5_4:-17770923 | Msa0841460:CDS |
TCAAAATTCATCTCGTTTAA+AGG | 0.154772 | 5_4:-17759819 | Msa0841460:CDS |
TACATACCTTTACATTAAAT+TGG | 0.185931 | 5_4:+17759382 | None:intergenic |
CGCGGATGCACGTGTGATTT+CGG | 0.205297 | 5_4:-17772771 | Msa0841460:CDS |
GCGGATGCACGTGTGATTTC+GGG | 0.222121 | 5_4:-17772770 | Msa0841460:CDS |
ACACATAAACATTGATGTTT+TGG | 0.229817 | 5_4:-17761955 | Msa0841460:CDS |
ACACATAAACATTGATGTTT+TGG | 0.229817 | 5_4:-17773146 | Msa0841460:CDS |
AAATTCTTCTCTTTCTCATT+TGG | 0.248104 | 5_4:-17761652 | Msa0841460:CDS |
GCACGCGTGGTTTCGGGAAT+TGG | 0.254382 | 5_4:-17761576 | Msa0841460:CDS |
TTAGCTTCTGTACCCTTTGC+AGG | 0.255516 | 5_4:-17772175 | Msa0841460:CDS |
CATGTATTTGTTGTACTTCC+TGG | 0.260159 | 5_4:+17759448 | None:intergenic |
CATTGATTGTGATCTCTTCC+TGG | 0.262345 | 5_4:+17762946 | None:intergenic |
GTGGACGCACGCGTGGTTTC+GGG | 0.268873 | 5_4:-17761582 | Msa0841460:CDS |
CAAAATTTATCTCGTTTAAA+GGG | 0.285810 | 5_4:-17770922 | Msa0841460:CDS |
TGTGGACGCACGCGTGGTTT+CGG | 0.286824 | 5_4:-17761583 | Msa0841460:CDS |
TTCCTTGGTCTTGCTTGAAC+TGG | 0.288423 | 5_4:+17763064 | None:intergenic |
CAAAATTCATCTCGTTTAAA+GGG | 0.297476 | 5_4:-17759818 | Msa0841460:CDS |
AATTCTTCTCTTTCTCATTT+GGG | 0.297733 | 5_4:-17761651 | Msa0841460:CDS |
CTTGTGGTGGAATCAATTTA+TGG | 0.303138 | 5_4:-17773329 | Msa0841460:CDS |
TTCCTTGGAGTTGCTTGAAC+TGG | 0.304559 | 5_4:+17774270 | None:intergenic |
GAAATTGCCATTTCACATCT+AGG | 0.305524 | 5_4:+17770820 | None:intergenic |
GAAATCGCCATACCACAAAA+AGG | 0.329741 | 5_4:+17759716 | None:intergenic |
TTGGTATGAATAATACTAAT+AGG | 0.344849 | 5_4:-17763010 | Msa0841460:CDS |
TTGGTCTTCCTCCTCTATAC+AGG | 0.345801 | 5_4:+17772223 | None:intergenic |
GAGATTAGATTAGGTCCTTA+TGG | 0.346027 | 5_4:-17761618 | Msa0841460:CDS |
GAGATTAGATTAGGTCCTTA+TGG | 0.346027 | 5_4:-17772806 | Msa0841460:intron |
AATGAAGCTTCAGTTTCTTC+AGG | 0.361096 | 5_4:-17760906 | Msa0841460:intron |
GAAACTGAAGCTTCATTTCA+AGG | 0.366934 | 5_4:+17760912 | None:intergenic |
AACGTAGCGTTGTTTCGATT+TGG | 0.369769 | 5_4:+17774396 | None:intergenic |
TGTTCAACCGCCACAGAGTT+AGG | 0.374680 | 5_4:+17774346 | None:intergenic |
TCTTCAACCGCCGCAGAGTT+AGG | 0.376976 | 5_4:+17763158 | None:intergenic |
TATGAAGCTTCAGATTCTTC+AGG | 0.377257 | 5_4:-17772114 | Msa0841460:intron |
GCATGGTAACCGGACGAATT+CGG | 0.380989 | 5_4:+17761267 | None:intergenic |
TTTGATGAGGAGATTAGATT+AGG | 0.382386 | 5_4:-17761627 | Msa0841460:CDS |
GCATGGTAATCGGACGAATT+CGG | 0.385531 | 5_4:+17772475 | None:intergenic |
CAGATCCATATGGACATTAC+AGG | 0.386796 | 5_4:-17759610 | Msa0841460:intron |
CAGATCCATATGGACATTAC+AGG | 0.386796 | 5_4:-17770714 | Msa0841460:intron |
ATCATAATCATCTTCTTCCT+TGG | 0.393236 | 5_4:+17763049 | None:intergenic |
ATCATACTCATCTTCTTCCT+TGG | 0.405460 | 5_4:+17774255 | None:intergenic |
GCTGAACTCTTTCACCTTCG+TGG | 0.410463 | 5_4:-17759426 | Msa0841460:CDS |
AACGTAGCGGAGTTTCGATT+TGG | 0.416847 | 5_4:+17763208 | None:intergenic |
TATTTACAATCTCTGTTAAG+TGG | 0.418287 | 5_4:-17761776 | Msa0841460:CDS |
TATTTACAATCTCTGTTAAG+TGG | 0.418287 | 5_4:-17772964 | Msa0841460:CDS |
GAATCTGAAGCTTCATATCA+AGG | 0.434632 | 5_4:+17772120 | None:intergenic |
TTAACAGAGATTGTAAATAT+AGG | 0.441758 | 5_4:+17761780 | None:intergenic |
TTAACAGAGATTGTAAATAT+AGG | 0.441758 | 5_4:+17772968 | None:intergenic |
ATAACATCCTCAGAGGAAAC+TGG | 0.443245 | 5_4:+17774322 | None:intergenic |
TACAATCTCTGTTAAGTGGC+TGG | 0.446958 | 5_4:-17761772 | Msa0841460:CDS |
TACAATCTCTGTTAAGTGGC+TGG | 0.446958 | 5_4:-17772960 | Msa0841460:CDS |
CACGAGAAATGGTTGACAAT+TGG | 0.448018 | 5_4:-17759491 | Msa0841460:CDS |
AGGTGAAGAAACAATAAGTT+CGG | 0.451785 | 5_4:+17763178 | None:intergenic |
AGGTGAAGAAACAATAAGTT+CGG | 0.451785 | 5_4:+17774366 | None:intergenic |
CCATACCTGTAATGTCCATA+TGG | 0.460598 | 5_4:+17759605 | None:intergenic |
CCATACCTGTAATGTCCATA+TGG | 0.460598 | 5_4:+17770709 | None:intergenic |
CTCGTTTAAAGGGGAATCAA+AGG | 0.473795 | 5_4:-17770912 | Msa0841460:CDS |
TAAAGGTCTGCAGGCATTTG+CGG | 0.475602 | 5_4:+17772438 | None:intergenic |
CTTTACATGTATCTGTGTAA+AGG | 0.484010 | 5_4:+17761213 | None:intergenic |
CTTTACATGTATCTGTGTAA+AGG | 0.484010 | 5_4:+17772421 | None:intergenic |
TTGTCGCCAATTTAATGTAA+AGG | 0.484725 | 5_4:-17759388 | Msa0841460:intron |
TGAATTGTACCCACGAGAAA+TGG | 0.492481 | 5_4:-17759502 | Msa0841460:CDS |
TAAAGGTCTGTAAGCATTTG+CGG | 0.496607 | 5_4:+17761230 | None:intergenic |
AAAATGAGGTGCGGTAATTG+TGG | 0.499022 | 5_4:-17759674 | Msa0841460:CDS |
AAAATGAAGTGCGGTAATTG+TGG | 0.499022 | 5_4:-17770778 | Msa0841460:CDS |
AATAAACATGTCAAAACAAT+CGG | 0.503126 | 5_4:+17761831 | None:intergenic |
AATAAACATGTCAAAACAAT+CGG | 0.503126 | 5_4:+17773019 | None:intergenic |
AATATAGGCGGTTGGTGACT+CGG | 0.504602 | 5_4:+17761795 | None:intergenic |
AATATAGGCGGTTGGTGACT+CGG | 0.504602 | 5_4:+17772983 | None:intergenic |
ACAACACGATTCACACCATA+AGG | 0.505722 | 5_4:+17761603 | None:intergenic |
TTCTCATTTGGGATTTGATG+AGG | 0.511092 | 5_4:-17761640 | Msa0841460:CDS |
TGCAGGGAACGCCGCCATGT+TGG | 0.511963 | 5_4:-17760950 | Msa0841460:intron |
TGCAGGGAACGCCGCCATGT+TGG | 0.511963 | 5_4:-17772158 | Msa0841460:CDS |
GTATCTGTGTAAAGGTCTGC+AGG | 0.513501 | 5_4:+17772429 | None:intergenic |
ATGTGAAACGCCCTGTATAG+AGG | 0.513554 | 5_4:-17772234 | Msa0841460:CDS |
GCGATACGATTCACACCATA+AGG | 0.515222 | 5_4:+17772791 | None:intergenic |
GGTATGGCGATTTCTCGAAC+TGG | 0.516919 | 5_4:-17759707 | Msa0841460:CDS |
TAGCTTCTGTACCCTTTGCA+GGG | 0.521333 | 5_4:-17772174 | Msa0841460:CDS |
TCAATTCCATCAAACATGAA+TGG | 0.521521 | 5_4:-17774457 | None:intergenic |
ATTGATTGTGATCTCTTCCT+GGG | 0.522695 | 5_4:+17762947 | None:intergenic |
ACATTAAATTGGCGACAACT+AGG | 0.522807 | 5_4:+17759393 | None:intergenic |
TGTTTGGCAGTTACTTGTGG+TGG | 0.527925 | 5_4:-17773342 | Msa0841460:intron |
CTTGACTCATCAGATCCATA+TGG | 0.530011 | 5_4:-17759620 | Msa0841460:CDS |
CTTTACTCATCAGATCCATA+TGG | 0.530407 | 5_4:-17770724 | Msa0841460:CDS |
CAACGAAGAATACGACCGTT+GGG | 0.530507 | 5_4:-17772315 | Msa0841460:CDS |
AGCACGAATAAATCCTCGCC+AGG | 0.531593 | 5_4:-17759466 | Msa0841460:CDS |
GTTTGCTATAGTGAATATCC+AGG | 0.532612 | 5_4:-17761465 | Msa0841460:intron |
TCGTTTAAAGGGGAATCAAA+GGG | 0.532888 | 5_4:-17770911 | Msa0841460:CDS |
CGACGAGGAATACAAACGTT+GGG | 0.534421 | 5_4:-17761107 | Msa0841460:CDS |
ATTGATTATGATCTCTTCCT+CGG | 0.538491 | 5_4:+17774165 | None:intergenic |
CAACAACACCGTTGATGACG+TGG | 0.538646 | 5_4:-17774293 | Msa0841460:CDS |
CATGGCGGCGTTCCCTGCAA+AGG | 0.542061 | 5_4:+17772162 | None:intergenic |
AAATTGCCATTTCACATCTA+GGG | 0.542786 | 5_4:+17770821 | None:intergenic |
AAACTGAAGCTTCATTTCAA+GGG | 0.545570 | 5_4:+17760913 | None:intergenic |
TCAACAAATTGAATTATCCC+AGG | 0.548612 | 5_4:-17762964 | Msa0841460:CDS |
ATGGCGGCGTTCCCTGCAAA+GGG | 0.549512 | 5_4:+17772163 | None:intergenic |
CTCGTTTAAAGGGGAATCAA+AGG | 0.550290 | 5_4:-17759808 | Msa0841460:CDS |
CTGGAGGTTGTAACAAAATG+AGG | 0.552755 | 5_4:-17759688 | Msa0841460:CDS |
ATGGCAATTTCTCGAACTGA+AGG | 0.553707 | 5_4:-17770808 | Msa0841460:CDS |
AAAATTTATCTCGTTTAAAG+GGG | 0.556004 | 5_4:-17770921 | Msa0841460:CDS |
AGTAAAGTGCTTTGTTGCAG+AGG | 0.558048 | 5_4:+17770740 | None:intergenic |
CAATTGTCAACCATTTCTCG+TGG | 0.558860 | 5_4:+17759492 | None:intergenic |
TTCAGCCTTGATACATGGAA+AGG | 0.559295 | 5_4:-17762107 | Msa0841460:CDS |
TTCAGCCTTGATACATGGAA+AGG | 0.559295 | 5_4:-17773296 | Msa0841460:CDS |
TGCAAGGAGATGATTCCGCC+AGG | 0.560987 | 5_4:-17772359 | Msa0841460:CDS |
GTTTGCTATAGTGAATATCC+AGG | 0.561630 | 5_4:-17772653 | Msa0841460:intron |
GTTGTGCCCTAGATGTGAAA+TGG | 0.561833 | 5_4:-17770827 | Msa0841460:CDS |
TGGTGACTCGGATACAACTT+AGG | 0.564182 | 5_4:+17772995 | None:intergenic |
GCAGACCTTTCCATGTATCA+AGG | 0.567121 | 5_4:+17762102 | None:intergenic |
GCAGACCTTTCCATGTATCA+AGG | 0.567121 | 5_4:+17773291 | None:intergenic |
TTCATTAACAGAGTTAACCT+TGG | 0.570315 | 5_4:+17761914 | None:intergenic |
TTCATTAACAGAGTTAACCT+TGG | 0.570315 | 5_4:+17773105 | None:intergenic |
TGGTGACTCGGATATGACTT+AGG | 0.571289 | 5_4:+17761807 | None:intergenic |
AGTCAAGTGCTTTGTTGCAG+AGG | 0.573825 | 5_4:+17759636 | None:intergenic |
AAAATTCATCTCGTTTAAAG+GGG | 0.576489 | 5_4:-17759817 | Msa0841460:CDS |
CAACAGGTACCGAATTCGTC+CGG | 0.578448 | 5_4:-17761276 | Msa0841460:intron |
TTATGTTTGGCAGTTACTTG+TGG | 0.583537 | 5_4:-17773345 | Msa0841460:intron |
ATGTCTTGATGCAAAATGCA+AGG | 0.595604 | 5_4:-17772375 | Msa0841460:CDS |
AATCTGAAGCTTCATATCAA+GGG | 0.595663 | 5_4:+17772121 | None:intergenic |
TCATGCATGCAATGCCAACA+TGG | 0.596649 | 5_4:+17760936 | None:intergenic |
TCATGCATGCAATGCCAACA+TGG | 0.596649 | 5_4:+17772144 | None:intergenic |
CTTTACACAGATACATGTAA+AGG | 0.597124 | 5_4:-17761212 | Msa0841460:CDS |
CTTTACACAGATACATGTAA+AGG | 0.597124 | 5_4:-17772420 | Msa0841460:CDS |
GAACAACACCGTTGATGACG+TGG | 0.598566 | 5_4:-17763087 | Msa0841460:CDS |
TGAAATAGGCATTACTGCCA+AGG | 0.598936 | 5_4:-17761931 | Msa0841460:CDS |
TGAAATAGGCATTACTGCCA+AGG | 0.598936 | 5_4:-17773122 | Msa0841460:CDS |
TGAACTGGCCACGTCATCAA+CGG | 0.599174 | 5_4:+17763079 | None:intergenic |
TGAACTGGCCACGTCATCAA+CGG | 0.599174 | 5_4:+17774285 | None:intergenic |
CATGTAAAGGAAGGAAACGT+TGG | 0.602358 | 5_4:-17761199 | Msa0841460:CDS |
GCAACGAAGAATACGACCGT+TGG | 0.602495 | 5_4:-17772316 | Msa0841460:CDS |
GGCCAGTTCAAGCAACTCCA+AGG | 0.603273 | 5_4:-17774272 | Msa0841460:CDS |
ATTTGTTGTACTTCCTGGCG+AGG | 0.603587 | 5_4:+17759453 | None:intergenic |
TGGTCTTCCTCCTCTATACA+GGG | 0.606295 | 5_4:+17772224 | None:intergenic |
TGATCAATTGCAGCAAGATG+AGG | 0.606467 | 5_4:-17762925 | Msa0841460:intron |
TGATCAATTGCAGCAAGATG+AGG | 0.606467 | 5_4:-17774143 | Msa0841460:intron |
TCGTGTTGTGGACGCACGCG+TGG | 0.607369 | 5_4:-17761589 | Msa0841460:CDS |
AGATTGTAAATATAGGCGGT+TGG | 0.611680 | 5_4:+17761787 | None:intergenic |
AGATTGTAAATATAGGCGGT+TGG | 0.611680 | 5_4:+17772975 | None:intergenic |
ATGGCGATTTCTCGAACTGG+AGG | 0.619538 | 5_4:-17759704 | Msa0841460:CDS |
TTCTTCACCTAACTCTGCGG+CGG | 0.619774 | 5_4:-17763165 | Msa0841460:CDS |
ATGTCTTGATGCAAAATGCA+AGG | 0.619818 | 5_4:-17761167 | Msa0841460:CDS |
TGTTTCTTCACCTAACTCTG+TGG | 0.621516 | 5_4:-17774356 | Msa0841460:CDS |
TAGGGCACAACTTGTAATCA+CGG | 0.622023 | 5_4:+17770839 | None:intergenic |
AAACATGTCAAAACAATCGG+TGG | 0.627900 | 5_4:+17761834 | None:intergenic |
AAACATGTCAAAACAATCGG+TGG | 0.627900 | 5_4:+17773022 | None:intergenic |
TGCAAGGAGATGATTCCACC+AGG | 0.628043 | 5_4:-17761151 | Msa0841460:CDS |
GTTGTAATTGTGATTTGTTG+CGG | 0.628090 | 5_4:+17774425 | None:intergenic |
TTATGGTGTGAATCGTGTTG+TGG | 0.628102 | 5_4:-17761601 | Msa0841460:CDS |
TTCTTCACCTAACTCTGTGG+CGG | 0.629584 | 5_4:-17774353 | Msa0841460:CDS |
AAAACACTTTCTTGGCGACG+AGG | 0.633505 | 5_4:-17761122 | Msa0841460:CDS |
ACACAGATACATGTAAAGGA+AGG | 0.633626 | 5_4:-17761208 | Msa0841460:CDS |
ACACAGATACATGTAAAGGA+AGG | 0.633626 | 5_4:-17772416 | Msa0841460:CDS |
ACAGAGATTGTAAATATAGG+CGG | 0.637777 | 5_4:+17761783 | None:intergenic |
ACAGAGATTGTAAATATAGG+CGG | 0.637777 | 5_4:+17772971 | None:intergenic |
GCGACGAGGAATACAAACGT+TGG | 0.641324 | 5_4:-17761108 | Msa0841460:CDS |
TCAACGAATTGAATTATCCG+AGG | 0.643703 | 5_4:-17774182 | Msa0841460:CDS |
TGTTTCTTCACCTAACTCTG+CGG | 0.644111 | 5_4:-17763168 | Msa0841460:CDS |
GGCCAGTTCAAGCAAGACCA+AGG | 0.646977 | 5_4:-17763066 | Msa0841460:CDS |
GTTGTTGTTGTGATTTGTTG+CGG | 0.647959 | 5_4:+17763237 | None:intergenic |
AATTGTCAACCATTTCTCGT+GGG | 0.649295 | 5_4:+17759493 | None:intergenic |
GTTCGGATTTGTTAACGTAG+CGG | 0.658547 | 5_4:+17763195 | None:intergenic |
TGAAACGCCCTGTATAGAGG+AGG | 0.669899 | 5_4:-17772231 | Msa0841460:CDS |
TGAACAACCAGTTTCCTCTG+AGG | 0.671032 | 5_4:-17774329 | Msa0841460:CDS |
CTAACATCATAGATTCCCAA+CGG | 0.674651 | 5_4:+17772300 | None:intergenic |
TGCATGCAATGCCAACATGG+CGG | 0.684498 | 5_4:+17760939 | None:intergenic |
TGCATGCAATGCCAACATGG+CGG | 0.684498 | 5_4:+17772147 | None:intergenic |
TAGGACAAGCTGAGCCACGA+AGG | 0.685943 | 5_4:+17759412 | None:intergenic |
GGTTGTAACAAAATGAAGTG+CGG | 0.686749 | 5_4:-17770787 | Msa0841460:CDS |
TTATGGTGTGAATCGTATCG+CGG | 0.692716 | 5_4:-17772789 | Msa0841460:CDS |
GTTGACAATAACATCCTCAG+AGG | 0.701723 | 5_4:+17774315 | None:intergenic |
GGTTGTAACAAAATGAGGTG+CGG | 0.709781 | 5_4:-17759683 | Msa0841460:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTATTATATATAAAAAAA+TGG | + | chr5_4:17761161-17761180 | None:intergenic | 0.0% |
!!! | ATTTAATTTTATTAAATTTT+TGG | + | chr5_4:17764253-17764272 | None:intergenic | 0.0% |
!! | AAAATTTAATAAAATTAAAT+AGG | - | chr5_4:17764253-17764272 | Msa0841460:intron | 0.0% |
!! | AAAAAAAAACAATATTTACA+AGG | + | chr5_4:17762508-17762527 | None:intergenic | 10.0% |
!!! | AATGTAATTTTAGAAATTTA+TGG | + | chr5_4:17763249-17763268 | None:intergenic | 10.0% |
!! | TTATTTATTTATATTAGCAT+AGG | + | chr5_4:17765691-17765710 | Msa0841470:five_prime_UTR | 10.0% |
!! | CATGAAATTAAATTAAATTA+TGG | + | chr5_4:17767571-17767590 | Msa0841470:intron | 10.0% |
!! | TATTAAATAAAAAAAATTGG+TGG | + | chr5_4:17771478-17771497 | None:intergenic | 10.0% |
!!! | GTTTTTCTTTATAAAAAAAA+AGG | + | chr5_4:17772195-17772214 | None:intergenic | 10.0% |
!!! | TAATTTTTTTAACCTAAAAA+AGG | - | chr5_4:17772909-17772928 | Msa0841460:intron | 10.0% |
!! | TAATGATATCTATTTATATT+GGG | + | chr5_4:17774255-17774274 | None:intergenic | 10.0% |
!! | ATAATGATATCTATTTATAT+TGG | + | chr5_4:17774256-17774275 | None:intergenic | 10.0% |
!!! | ACTGAATATTATTTTATGTT+TGG | - | chr5_4:17759431-17759450 | Msa0841460:CDS | 15.0% |
!! | AATTCAAAAAAAAAAAATCG+TGG | + | chr5_4:17760266-17760285 | None:intergenic | 15.0% |
!! | TAAACAAATTTGAATTTAAC+AGG | - | chr5_4:17764008-17764027 | Msa0841460:intron | 15.0% |
!! | AAACAAATTTGAATTTAACA+GGG | - | chr5_4:17764009-17764028 | Msa0841460:intron | 15.0% |
!! | ACAACTATTAAAATTAAGTA+AGG | - | chr5_4:17764070-17764089 | Msa0841460:intron | 15.0% |
!! | TTTAGGAGAAAAAAAATATA+GGG | + | chr5_4:17764327-17764346 | None:intergenic | 15.0% |
!! | ATTTAGGAGAAAAAAAATAT+AGG | + | chr5_4:17764328-17764347 | None:intergenic | 15.0% |
!! | ATAAGTGAAAAACTAAATTT+AGG | + | chr5_4:17764344-17764363 | None:intergenic | 15.0% |
!! | TGTTATTGCATTTATATTTA+AGG | + | chr5_4:17765284-17765303 | Msa0841470:intron | 15.0% |
!!! | TTTGAAACAAACATAAATTT+CGG | - | chr5_4:17765966-17765985 | Msa0841460:intron | 15.0% |
!! | ATAATAAATCTTATCAAAGT+CGG | + | chr5_4:17766158-17766177 | Msa0841470:intron | 15.0% |
!! | TTTGATTATAATTTCAAACA+CGG | - | chr5_4:17766177-17766196 | Msa0841460:intron | 15.0% |
!!! | TTTTTGTTTTATTCTTTTGT+AGG | + | chr5_4:17766815-17766834 | Msa0841470:intron | 15.0% |
!! | TAAAAAGAATTGATTGAAAA+TGG | - | chr5_4:17767634-17767653 | Msa0841460:intron | 15.0% |
!! | ACAATAGTTGAAATATTTAT+AGG | - | chr5_4:17768287-17768306 | Msa0841460:intron | 15.0% |
!! | CAATAGTTGAAATATTTATA+GGG | - | chr5_4:17768288-17768307 | Msa0841460:intron | 15.0% |
!!! | ATTTTTTTTGTTAAGAAGTA+TGG | - | chr5_4:17768376-17768395 | Msa0841460:intron | 15.0% |
!!! | TTTTTAGAAGGATTAAATAA+GGG | + | chr5_4:17768515-17768534 | None:intergenic | 15.0% |
!!! | TTTTTTAGAAGGATTAAATA+AGG | + | chr5_4:17768516-17768535 | None:intergenic | 15.0% |
!! | AATCACTTATTTCAATAAAA+GGG | + | chr5_4:17768733-17768752 | None:intergenic | 15.0% |
!! | AAATCACTTATTTCAATAAA+AGG | + | chr5_4:17768734-17768753 | None:intergenic | 15.0% |
!!! | TTTTATGAATTTACTATGTA+AGG | + | chr5_4:17769156-17769175 | None:intergenic | 15.0% |
!!! | CATGGTTTTTTTTTTTTTTT+TGG | + | chr5_4:17769387-17769406 | None:intergenic | 15.0% |
!!! | GATAATAATGATATTGATTT+TGG | - | chr5_4:17769760-17769779 | Msa0841460:intron | 15.0% |
!!! | TTTTAGGTTAAAAAAATTAC+AGG | + | chr5_4:17772908-17772927 | None:intergenic | 15.0% |
!!! | TCATGTCATATTTTTATTTT+AGG | + | chr5_4:17773450-17773469 | None:intergenic | 15.0% |
!! | GAGTATGATAATAATGATAT+TGG | - | chr5_4:17758548-17758567 | Msa0841460:intron | 20.0% |
!! | TGATAATAATGATATTGGTA+TGG | - | chr5_4:17758553-17758572 | Msa0841460:intron | 20.0% |
!! | TTAATCTTAATTATAGTGCT+TGG | + | chr5_4:17758751-17758770 | None:intergenic | 20.0% |
!!! | TTCTGTTATTTCAAAGTTTA+TGG | - | chr5_4:17759171-17759190 | Msa0841460:intron | 20.0% |
!! | AATAAACATGTCAAAACAAT+CGG | + | chr5_4:17759773-17759792 | None:intergenic | 20.0% |
!! | TTAACAGAGATTGTAAATAT+AGG | + | chr5_4:17759824-17759843 | None:intergenic | 20.0% |
!! | ATCCTACATAGAAATAAAAA+GGG | + | chr5_4:17761137-17761156 | None:intergenic | 20.0% |
!!! | TTAATTTTCACCAAAAACTT+CGG | - | chr5_4:17761482-17761501 | Msa0841460:CDS | 20.0% |
!!! | TCTATCATTTAGTTCATAAT+TGG | + | chr5_4:17761529-17761548 | None:intergenic | 20.0% |
!! | TCCTATTCTAATTAGAATTT+AGG | - | chr5_4:17761590-17761609 | Msa0841460:CDS | 20.0% |
!! | TCCTAAATTCTAATTAGAAT+AGG | + | chr5_4:17761594-17761613 | None:intergenic | 20.0% |
!!! | TTTCTGTAATTTTTTTAACC+TGG | - | chr5_4:17761799-17761818 | Msa0841460:CDS | 20.0% |
!!! | TAATTTTTTTAACCTGGAAA+AGG | - | chr5_4:17761805-17761824 | Msa0841460:CDS | 20.0% |
!! | TCAAAATTTATCTCGTTTAA+AGG | - | chr5_4:17761866-17761885 | Msa0841460:CDS | 20.0% |
!! | CAAAATTTATCTCGTTTAAA+GGG | - | chr5_4:17761867-17761886 | Msa0841460:CDS | 20.0% |
!! | AAAATTTATCTCGTTTAAAG+GGG | - | chr5_4:17761868-17761887 | Msa0841460:CDS | 20.0% |
!! | TTTCTTAAAATTGGAATGTT+TGG | + | chr5_4:17762138-17762157 | None:intergenic | 20.0% |
!! | AAAAACAGGTTTCTTAAAAT+TGG | + | chr5_4:17762147-17762166 | None:intergenic | 20.0% |
!! | ATTACATTATCTCACATAAA+CGG | - | chr5_4:17763261-17763280 | Msa0841460:intron | 20.0% |
!! | TACTAAACTATAACTTGAAA+AGG | + | chr5_4:17763634-17763653 | None:intergenic | 20.0% |
!! | AAGATAAAAGTAAGAAAATC+TGG | - | chr5_4:17763879-17763898 | Msa0841460:intron | 20.0% |
!!! | TAAAATGCCTCAATTTTATA+AGG | - | chr5_4:17764101-17764120 | Msa0841460:intron | 20.0% |
!!! | TTTTAGTCCTTATAAAATTG+AGG | + | chr5_4:17764111-17764130 | None:intergenic | 20.0% |
!! | AAATTAAATAGGACTAATGT+TGG | - | chr5_4:17764264-17764283 | Msa0841460:intron | 20.0% |
!!! | TATAGGGTTAATTATGTTTT+AGG | + | chr5_4:17764311-17764330 | None:intergenic | 20.0% |
!! | ATCTTCTATATGTTGAAAAT+TGG | - | chr5_4:17764785-17764804 | Msa0841460:intron | 20.0% |
!!! | AATCAGAATACTTAAAGTTT+TGG | + | chr5_4:17764941-17764960 | None:intergenic | 20.0% |
!! | AATCAAAAGAATTGGATAAA+TGG | - | chr5_4:17765218-17765237 | Msa0841460:intron | 20.0% |
!! | ATATAAATGCAATAACACAA+AGG | - | chr5_4:17765287-17765306 | Msa0841460:intron | 20.0% |
!! | TATAAATGCAATAACACAAA+GGG | - | chr5_4:17765288-17765307 | Msa0841460:intron | 20.0% |
!! | TGTTTATTAGCAAAACAATA+AGG | - | chr5_4:17765343-17765362 | Msa0841460:intron | 20.0% |
!!! | TTTTGCGAATAGTTTATAAT+GGG | + | chr5_4:17765654-17765673 | Msa0841470:intron | 20.0% |
!!! | ATTTTGCGAATAGTTTATAA+TGG | + | chr5_4:17765655-17765674 | Msa0841470:intron | 20.0% |
!! | AAACAAATAGAAAATAGAGT+AGG | - | chr5_4:17765716-17765735 | Msa0841460:intron | 20.0% |
!!! | AAACTATAAAACCAATGTTT+TGG | + | chr5_4:17765861-17765880 | Msa0841470:CDS | 20.0% |
!! | TTTGTTTCAAATTGCTAATA+AGG | + | chr5_4:17765957-17765976 | Msa0841470:intron | 20.0% |
!! | GCTTGAATAACTAAATTTAA+GGG | + | chr5_4:17766306-17766325 | Msa0841470:intron | 20.0% |
!! | TGCTTGAATAACTAAATTTA+AGG | + | chr5_4:17766307-17766326 | Msa0841470:intron | 20.0% |
!!! | ATCCATATCAAAACATTTTA+TGG | + | chr5_4:17766850-17766869 | Msa0841470:intron | 20.0% |
!!! | ATAAAATGTTTTGATATGGA+TGG | - | chr5_4:17766849-17766868 | Msa0841460:intron | 20.0% |
!!! | ATTTTTAGGATCTTATAACT+TGG | + | chr5_4:17767599-17767618 | Msa0841470:intron | 20.0% |
!! | AGTTATAAGATCCTAAAAAT+TGG | - | chr5_4:17767599-17767618 | Msa0841460:intron | 20.0% |
!! | AATTGATTGAAAATGGTATT+TGG | - | chr5_4:17767641-17767660 | Msa0841460:intron | 20.0% |
!! | ACTTCTTCATTTAAAAGATT+CGG | + | chr5_4:17767682-17767701 | Msa0841470:CDS | 20.0% |
!! | TGTATAACATATACAAAGTT+CGG | - | chr5_4:17768106-17768125 | Msa0841460:intron | 20.0% |
!!! | AATTATTGACTTAAAAGAAG+AGG | - | chr5_4:17768201-17768220 | Msa0841460:intron | 20.0% |
!!! | GAAATTCTTCTTTTAAGATA+AGG | - | chr5_4:17768405-17768424 | Msa0841460:intron | 20.0% |
!! | AATATTCATACTAACTAGTT+AGG | - | chr5_4:17768472-17768491 | Msa0841460:intron | 20.0% |
!!! | ATGCTTAATTTTTTTTCACA+AGG | - | chr5_4:17769220-17769239 | Msa0841460:intron | 20.0% |
!!! | TATGTTTGAAACATCATTAA+CGG | - | chr5_4:17769464-17769483 | Msa0841460:intron | 20.0% |
!! | TTGGTATGAATAATACTAAT+AGG | - | chr5_4:17769779-17769798 | Msa0841460:intron | 20.0% |
!! | ATACTACTAATAACATCAAA+AGG | + | chr5_4:17769927-17769946 | None:intergenic | 20.0% |
!!! | TTCTGTTATTTCAAAGTTTA+TGG | - | chr5_4:17759171-17759190 | Msa0841460:intron | 20.0% |
!! | GTGATATTTGGAAATTTATT+TGG | - | chr5_4:17770555-17770574 | Msa0841460:intron | 20.0% |
!! | AATAAACATGTCAAAACAAT+CGG | + | chr5_4:17759773-17759792 | None:intergenic | 20.0% |
!! | TTAACAGAGATTGTAAATAT+AGG | + | chr5_4:17759824-17759843 | None:intergenic | 20.0% |
!!! | AAAAGCTAAAAAAGCATTTT+GGG | + | chr5_4:17771811-17771830 | None:intergenic | 20.0% |
!! | ATCCTACATACAAATAAAAA+GGG | + | chr5_4:17772304-17772323 | None:intergenic | 20.0% |
!! | AATAAGTATAAATGTGTGTT+TGG | + | chr5_4:17772588-17772607 | None:intergenic | 20.0% |
!!! | TTAATTTTCACCAAAAACTT+CGG | - | chr5_4:17761482-17761501 | Msa0841460:CDS | 20.0% |
!! | TTTCTTAAAATTGGAATGTT+TGG | + | chr5_4:17762138-17762157 | None:intergenic | 20.0% |
!! | AAAAACAGGTTTCTTAAAAT+TGG | + | chr5_4:17762147-17762166 | None:intergenic | 20.0% |
!! | TACATACCTTTACATTAAAT+TGG | + | chr5_4:17773410-17773429 | None:intergenic | 20.0% |
!! | TTAAAATTCTCTACAAAAAC+TGG | + | chr5_4:17773646-17773665 | None:intergenic | 20.0% |
!!! | ATTATTTGTGTAGGTTATTT+TGG | - | chr5_4:17773723-17773742 | Msa0841460:intron | 20.0% |
! | ATGATATTGGTATGGATAAT+AGG | - | chr5_4:17758561-17758580 | Msa0841460:intron | 25.0% |
! | GAGGTAATTATCAATCTAAT+TGG | - | chr5_4:17758665-17758684 | Msa0841460:intron | 25.0% |
! | AAATAAGCTGATAAGAAGAA+TGG | - | chr5_4:17758848-17758867 | Msa0841460:intron | 25.0% |
! | GCGTGTTAATTAAATTAAGA+AGG | - | chr5_4:17759009-17759028 | Msa0841460:intron | 25.0% |
! | TGATTAGTAATAGAGATAGA+TGG | - | chr5_4:17759341-17759360 | Msa0841460:intron | 25.0% |
! | GTGACATTTGGAAATTTATT+TGG | - | chr5_4:17759366-17759385 | Msa0841460:intron | 25.0% |
! | ACAAAAAAAGAGTCATGAAT+AGG | + | chr5_4:17759608-17759627 | None:intergenic | 25.0% |
!! | ACACATAAACATTGATGTTT+TGG | - | chr5_4:17759643-17759662 | Msa0841460:CDS | 25.0% |
!! | CACATAAACATTGATGTTTT+GGG | - | chr5_4:17759644-17759663 | Msa0841460:CDS | 25.0% |
! | TATTTACAATCTCTGTTAAG+TGG | - | chr5_4:17759825-17759844 | Msa0841460:CDS | 25.0% |
!! | TTTAAGTTTATGTTCCAAGT+TGG | - | chr5_4:17759865-17759884 | Msa0841460:intron | 25.0% |
! | AAATTCTTCTCTTTCTCATT+TGG | - | chr5_4:17759949-17759968 | Msa0841460:intron | 25.0% |
! | AATTCTTCTCTTTCTCATTT+GGG | - | chr5_4:17759950-17759969 | Msa0841460:intron | 25.0% |
!!! | TTGTTGTAGCTTTGTAAAAA+AGG | + | chr5_4:17760070-17760089 | None:intergenic | 25.0% |
! | AACATTCATGCAATTCTTTA+AGG | + | chr5_4:17760114-17760133 | None:intergenic | 25.0% |
! | AGCATATATTGAAAATTACC+TGG | + | chr5_4:17760157-17760176 | None:intergenic | 25.0% |
! | AATGAAATTAACTTTCACCA+TGG | - | chr5_4:17760219-17760238 | Msa0841460:intron | 25.0% |
! | AAAAATGTTTGCATGGTAAT+CGG | + | chr5_4:17760327-17760346 | None:intergenic | 25.0% |
!!! | AGAAGCTAAAAAAGCATTTT+GGG | + | chr5_4:17760603-17760622 | None:intergenic | 25.0% |
! | ATATATGTCCAGAAATCTAT+AGG | - | chr5_4:17760704-17760723 | Msa0841460:intron | 25.0% |
!! | CCAGATAAAAGAAGATTTTA+GGG | - | chr5_4:17760955-17760974 | Msa0841460:intron | 25.0% |
!! | CAGATAAAAGAAGATTTTAG+GGG | - | chr5_4:17760956-17760975 | Msa0841460:intron | 25.0% |
!!! | AGTAATACTCATTGATTCTT+CGG | + | chr5_4:17761050-17761069 | None:intergenic | 25.0% |
! | ACATAGAAATAAAAAGGGAA+TGG | + | chr5_4:17761132-17761151 | None:intergenic | 25.0% |
!!! | TTCCCTTTTTATTTCTATGT+AGG | - | chr5_4:17761132-17761151 | Msa0841460:CDS | 25.0% |
! | CATCCTACATAGAAATAAAA+AGG | + | chr5_4:17761138-17761157 | None:intergenic | 25.0% |
!! | TATATCACATAGAGGATTTT+TGG | - | chr5_4:17761233-17761252 | Msa0841460:CDS | 25.0% |
!!! | ATGGTTTGGATATTTTCAAA+GGG | + | chr5_4:17761343-17761362 | None:intergenic | 25.0% |
!!! | TATGGTTTGGATATTTTCAA+AGG | + | chr5_4:17761344-17761363 | None:intergenic | 25.0% |
! | ACTAAGTATAAATGTGTGTT+TGG | + | chr5_4:17761421-17761440 | None:intergenic | 25.0% |
! | TTGGTGAAAATTAATATACG+AGG | + | chr5_4:17761476-17761495 | None:intergenic | 25.0% |
! | TAATTAGAATAGGATCCAAA+CGG | + | chr5_4:17761584-17761603 | None:intergenic | 25.0% |
! | AATTAATGTGGAAATCTCAA+AGG | + | chr5_4:17761633-17761652 | None:intergenic | 25.0% |
! | TCGAATGATAACAATTAATG+TGG | + | chr5_4:17761645-17761664 | None:intergenic | 25.0% |
! | ACATTAATTGTTATCATTCG+AGG | - | chr5_4:17761644-17761663 | Msa0841460:CDS | 25.0% |
! | AACTCACATCAAAACATAAA+GGG | + | chr5_4:17761713-17761732 | None:intergenic | 25.0% |
! | AAACTCACATCAAAACATAA+AGG | + | chr5_4:17761714-17761733 | None:intergenic | 25.0% |
!!! | TTTATGTTTTGATGTGAGTT+TGG | - | chr5_4:17761713-17761732 | Msa0841460:intron | 25.0% |
!!! | AAACCTGTTTTTGTCATTTT+AGG | - | chr5_4:17762155-17762174 | Msa0841460:intron | 25.0% |
!!! | AACCTGTTTTTGTCATTTTA+GGG | - | chr5_4:17762156-17762175 | Msa0841460:intron | 25.0% |
!! | ATCTCTTTTATCAAAATCCA+AGG | + | chr5_4:17762249-17762268 | None:intergenic | 25.0% |
!!! | TTGGATTTTGATAAAAGAGA+TGG | - | chr5_4:17762248-17762267 | Msa0841460:intron | 25.0% |
!!! | ATATCAAACTTTGTTTTAGC+AGG | - | chr5_4:17762753-17762772 | Msa0841460:intron | 25.0% |
!! | GTGAAAATCGTGAATATTTT+TGG | - | chr5_4:17762858-17762877 | Msa0841460:intron | 25.0% |
! | CAAATATCTCATGGATTTAT+TGG | + | chr5_4:17762974-17762993 | None:intergenic | 25.0% |
!!! | GTAGTTTTACAAATATCTCA+TGG | + | chr5_4:17762983-17763002 | None:intergenic | 25.0% |
! | ATCACACATAACGATTTAAA+CGG | - | chr5_4:17763135-17763154 | Msa0841460:intron | 25.0% |
! | AATATGGGTTTCATAATTCT+AGG | + | chr5_4:17763468-17763487 | None:intergenic | 25.0% |
! | TTGAATTAAGCATTACTCTT+TGG | + | chr5_4:17763562-17763581 | None:intergenic | 25.0% |
!!! | AAACAAACTTTGTTTTAGCA+TGG | + | chr5_4:17763719-17763738 | None:intergenic | 25.0% |
!!! | TTTGCGATAATTTTTTACGA+AGG | - | chr5_4:17763917-17763936 | Msa0841460:intron | 25.0% |
!!! | ACATCTGACTTTTTTTTGTT+GGG | + | chr5_4:17764144-17764163 | None:intergenic | 25.0% |
!!! | TTTTTTTCCGTTAGCAAAAT+CGG | + | chr5_4:17764221-17764240 | None:intergenic | 25.0% |
! | GAATACAAACTTATCTTAAC+TGG | - | chr5_4:17764964-17764983 | Msa0841460:intron | 25.0% |
!!! | TATGTGTTTAACTTTTGCAT+AGG | + | chr5_4:17765185-17765204 | Msa0841470:intron | 25.0% |
! | TCACTGATAATCAAAAGAAT+TGG | - | chr5_4:17765210-17765229 | Msa0841460:intron | 25.0% |
! | ATAAATGCAATAACACAAAG+GGG | - | chr5_4:17765289-17765308 | Msa0841460:intron | 25.0% |
! | AATAAACAGATACTTTGCAA+TGG | + | chr5_4:17765331-17765350 | Msa0841470:intron | 25.0% |
! | ATTAATGATGTAGCCAAATA+AGG | - | chr5_4:17765397-17765416 | Msa0841460:intron | 25.0% |
!!! | AAATAGATTTTAATGCAGAG+TGG | + | chr5_4:17765581-17765600 | Msa0841470:intron | 25.0% |
! | AATTGAAGAAAATAATGACG+AGG | + | chr5_4:17765822-17765841 | Msa0841470:CDS | 25.0% |
! | AACAATTGTGATAGAGAATA+TGG | + | chr5_4:17765913-17765932 | Msa0841470:intron | 25.0% |
! | GAAAATTTCAGAAAGTAAAC+AGG | - | chr5_4:17765988-17766007 | Msa0841460:intron | 25.0% |
!! | GCATTTTGTAGTCATTTAAT+TGG | + | chr5_4:17766213-17766232 | Msa0841470:intron | 25.0% |
! | TTAGTTATTCAAGCATCAAT+TGG | - | chr5_4:17766312-17766331 | Msa0841460:intron | 25.0% |
!!! | TATTGTTGTTTATAGAGTGT+GGG | + | chr5_4:17766573-17766592 | Msa0841470:intron | 25.0% |
!!! | TTATTGTTGTTTATAGAGTG+TGG | + | chr5_4:17766574-17766593 | Msa0841470:intron | 25.0% |
! | ACAACAATAATGATAACATG+CGG | - | chr5_4:17766584-17766603 | Msa0841460:intron | 25.0% |
! | AACATAACTCATCAGATAAA+AGG | - | chr5_4:17766612-17766631 | Msa0841460:intron | 25.0% |
!!! | TTGTTTTATTCTTTTGTAGG+TGG | + | chr5_4:17766812-17766831 | Msa0841470:intron | 25.0% |
!!! | TGCCATAAAATGTTTTGATA+TGG | - | chr5_4:17766845-17766864 | Msa0841460:intron | 25.0% |
! | AACCTGATCCTAAAATAATA+AGG | - | chr5_4:17766894-17766913 | Msa0841460:intron | 25.0% |
! | ACCTGATCCTAAAATAATAA+GGG | - | chr5_4:17766895-17766914 | Msa0841460:intron | 25.0% |
!! | GTTAGTACCCTTATTATTTT+AGG | + | chr5_4:17766905-17766924 | Msa0841470:intron | 25.0% |
!!! | AAAATAATAAGGGTACTAAC+AGG | - | chr5_4:17766905-17766924 | Msa0841460:intron | 25.0% |
!! | TTTTAAACCTCTTTTTCTCA+AGG | - | chr5_4:17766928-17766947 | Msa0841460:intron | 25.0% |
!! | TTTAAACCTCTTTTTCTCAA+GGG | - | chr5_4:17766929-17766948 | Msa0841460:intron | 25.0% |
!!! | TGATTTTCTCTAGAATTTTG+TGG | + | chr5_4:17767131-17767150 | Msa0841470:intron | 25.0% |
!!! | TTGAACAAACCTCTATTTTT+CGG | - | chr5_4:17767418-17767437 | Msa0841460:intron | 25.0% |
! | TAAAACAGTTGTAACTTCAT+TGG | - | chr5_4:17767484-17767503 | Msa0841460:intron | 25.0% |
! | AAAACAGTTGTAACTTCATT+GGG | - | chr5_4:17767485-17767504 | Msa0841460:intron | 25.0% |
! | AAATGGTATTTGGCAAAATT+AGG | - | chr5_4:17767651-17767670 | Msa0841460:intron | 25.0% |
! | AAAAATATTGTGCCTTTCTT+TGG | - | chr5_4:17767807-17767826 | Msa0841460:intron | 25.0% |
! | GTATAACATATACAAAGTTC+GGG | - | chr5_4:17768107-17768126 | Msa0841460:intron | 25.0% |
! | TATAACATATACAAAGTTCG+GGG | - | chr5_4:17768108-17768127 | Msa0841460:intron | 25.0% |
!!! | ATTCTTCTTTTAAGATAAGG+TGG | - | chr5_4:17768408-17768427 | Msa0841460:intron | 25.0% |
!!! | TTCTTCTTTTAAGATAAGGT+GGG | - | chr5_4:17768409-17768428 | Msa0841460:intron | 25.0% |
!!! | TAAGGACACAATTTTTTAGA+AGG | + | chr5_4:17768527-17768546 | None:intergenic | 25.0% |
!!! | AAAAACTATGATTTTGGTGA+CGG | + | chr5_4:17768636-17768655 | None:intergenic | 25.0% |
!! | AGGAGAAAAAACTATGATTT+TGG | + | chr5_4:17768642-17768661 | None:intergenic | 25.0% |
!!! | GTCGTTTTATGTTATTAACA+TGG | - | chr5_4:17768996-17769015 | Msa0841460:intron | 25.0% |
! | TATTCATGCATTCAAATTGA+TGG | + | chr5_4:17769089-17769108 | None:intergenic | 25.0% |
! | AAAAAACCATGTGATTAATG+TGG | - | chr5_4:17769396-17769415 | Msa0841460:intron | 25.0% |
! | GAGGTAATTATCAATCTAAT+TGG | - | chr5_4:17758665-17758684 | Msa0841460:intron | 25.0% |
!!! | AAGTTATAAGCTGTTTTCAT+AGG | - | chr5_4:17769992-17770011 | Msa0841460:intron | 25.0% |
! | AAATAAGCTGATAAGAAGAA+TGG | - | chr5_4:17758848-17758867 | Msa0841460:intron | 25.0% |
! | GCGTGTTAATTAAATTAAGA+AGG | - | chr5_4:17759009-17759028 | Msa0841460:intron | 25.0% |
! | GCAAAACACAATTTATTGAT+TGG | - | chr5_4:17770512-17770531 | Msa0841460:intron | 25.0% |
! | AAAAAAAAAGAGTCACGAAT+AGG | + | chr5_4:17770797-17770816 | None:intergenic | 25.0% |
!! | ACACATAAACATTGATGTTT+TGG | - | chr5_4:17759643-17759662 | Msa0841460:CDS | 25.0% |
!! | CACATAAACATTGATGTTTT+GGG | - | chr5_4:17759644-17759663 | Msa0841460:CDS | 25.0% |
! | TATTTACAATCTCTGTTAAG+TGG | - | chr5_4:17759825-17759844 | Msa0841460:CDS | 25.0% |
!! | TTTAAGTTTATGTTCCAAGT+TGG | - | chr5_4:17759865-17759884 | Msa0841460:intron | 25.0% |
! | AAATTCTTCTCTTTCTCATT+TGG | - | chr5_4:17759949-17759968 | Msa0841460:intron | 25.0% |
! | AATTCTTCTCTTTCTCATTT+GGG | - | chr5_4:17759950-17759969 | Msa0841460:intron | 25.0% |
!!! | TTGTTGTAGCTTTGTAAAAA+AGG | + | chr5_4:17760070-17760089 | None:intergenic | 25.0% |
!!! | ATTCTTTAAGGAAGTTTTGA+TGG | + | chr5_4:17771290-17771309 | None:intergenic | 25.0% |
! | AACATTCATGCAATTCTTTA+AGG | + | chr5_4:17760114-17760133 | None:intergenic | 25.0% |
! | AATATTAAGTCAAGCATAGT+GGG | + | chr5_4:17771380-17771399 | None:intergenic | 25.0% |
! | AATCAAATTAACTTTGACCA+TGG | - | chr5_4:17771431-17771450 | Msa0841460:intron | 25.0% |
!!! | CAAAAGCTAAAAAAGCATTT+TGG | + | chr5_4:17771812-17771831 | None:intergenic | 25.0% |
! | GTTTACATATTACAGCAAAT+AGG | + | chr5_4:17772248-17772267 | None:intergenic | 25.0% |
! | ACATACAAATAAAAAGGGAA+TGG | + | chr5_4:17772299-17772318 | None:intergenic | 25.0% |
!!! | TTCCCTTTTTATTTGTATGT+AGG | - | chr5_4:17772299-17772318 | Msa0841460:CDS | 25.0% |
! | CATCCTACATACAAATAAAA+AGG | + | chr5_4:17772305-17772324 | None:intergenic | 25.0% |
!!! | ATGGTTTGGATATTTTCAAA+GGG | + | chr5_4:17761343-17761362 | None:intergenic | 25.0% |
!!! | TATGGTTTGGATATTTTCAA+AGG | + | chr5_4:17761344-17761363 | None:intergenic | 25.0% |
! | AATGCTAAAAGCTATAGTTT+GGG | + | chr5_4:17772553-17772572 | None:intergenic | 25.0% |
! | TTGGTGAAAATTAATATACG+AGG | + | chr5_4:17761476-17761495 | None:intergenic | 25.0% |
!! | ACAAAAATTTCCGAAGTTTT+TGG | + | chr5_4:17772662-17772681 | None:intergenic | 25.0% |
!! | AAAAACTTCGGAAATTTTTG+TGG | - | chr5_4:17772661-17772680 | Msa0841460:CDS | 25.0% |
! | GATCTTGTTCTAATTAGAAT+AGG | - | chr5_4:17772757-17772776 | Msa0841460:CDS | 25.0% |
! | TCGTATAATAACAGTTAATG+AGG | + | chr5_4:17772812-17772831 | None:intergenic | 25.0% |
! | TCATTAACTGTTATTATACG+AGG | - | chr5_4:17772811-17772830 | Msa0841460:intron | 25.0% |
!!! | GAAAAATTGAAGCCTTTTTT+AGG | + | chr5_4:17772924-17772943 | None:intergenic | 25.0% |
!! | AAAAAAGGCTTCAATTTTTC+TGG | - | chr5_4:17772924-17772943 | Msa0841460:intron | 25.0% |
! | TCAAAATTCATCTCGTTTAA+AGG | - | chr5_4:17772970-17772989 | Msa0841460:CDS | 25.0% |
! | CAAAATTCATCTCGTTTAAA+GGG | - | chr5_4:17772971-17772990 | Msa0841460:CDS | 25.0% |
! | AAAATTCATCTCGTTTAAAG+GGG | - | chr5_4:17772972-17772991 | Msa0841460:CDS | 25.0% |
!!! | AAACCTGTTTTTGTCATTTA+AGG | - | chr5_4:17773259-17773278 | Msa0841460:intron | 25.0% |
! | TTTCCTTAAATGACAAAAAC+AGG | + | chr5_4:17773265-17773284 | None:intergenic | 25.0% |
!!! | AAACCATTCATTTTAGTCTT+TGG | + | chr5_4:17773491-17773510 | None:intergenic | 25.0% |
! | ACACAAATAATTGTGAGATT+TGG | + | chr5_4:17773714-17773733 | None:intergenic | 25.0% |
! | AATCTCACAATTATTTGTGT+AGG | - | chr5_4:17773714-17773733 | Msa0841460:intron | 25.0% |
! | TTCAATCAAATCTCACTATT+TGG | + | chr5_4:17773765-17773784 | None:intergenic | 25.0% |
! | AAATAGTGAGATTTGATTGA+AGG | - | chr5_4:17773764-17773783 | Msa0841460:intron | 25.0% |
!! | TCTGATGTATTTGCATATTT+TGG | - | chr5_4:17773874-17773893 | Msa0841460:intron | 25.0% |
! | TTCTATCCAAACCAAATTAT+CGG | + | chr5_4:17774321-17774340 | None:intergenic | 25.0% |
!! | GTTGTAATTGTGATTTGTTG+CGG | + | chr5_4:17758367-17758386 | None:intergenic | 30.0% |
AGGTGAAGAAACAATAAGTT+CGG | + | chr5_4:17758426-17758445 | None:intergenic | 30.0% | |
ATTGATTATGATCTCTTCCT+CGG | + | chr5_4:17758627-17758646 | None:intergenic | 30.0% | |
ATACTACTACTAACATCGAA+AGG | + | chr5_4:17758709-17758728 | None:intergenic | 30.0% | |
TCTTAATTATAGTGCTTGGT+AGG | + | chr5_4:17758747-17758766 | None:intergenic | 30.0% | |
!! | AACCTATAAGCTGTTTTCAT+AGG | - | chr5_4:17758805-17758824 | Msa0841460:intron | 30.0% |
! | CTATGCCAATAACATAGTTT+TGG | - | chr5_4:17759540-17759559 | Msa0841460:intron | 30.0% |
GTTTGCCAAAACTATGTTAT+TGG | + | chr5_4:17759548-17759567 | None:intergenic | 30.0% | |
TCAATGTTTATGTGTATCTG+AGG | + | chr5_4:17759638-17759657 | None:intergenic | 30.0% | |
!! | ATTGATGTTTTGGGTGAAAT+AGG | - | chr5_4:17759653-17759672 | Msa0841460:CDS | 30.0% |
TTCATTAACAGAGTTAACCT+TGG | + | chr5_4:17759687-17759706 | None:intergenic | 30.0% | |
ACAGAGATTGTAAATATAGG+CGG | + | chr5_4:17759821-17759840 | None:intergenic | 30.0% | |
TTTGATGAGGAGATTAGATT+AGG | - | chr5_4:17759974-17759993 | Msa0841460:intron | 30.0% | |
TAATTTCATTTGAGCAAGCA+CGG | + | chr5_4:17760209-17760228 | None:intergenic | 30.0% | |
AAAAAAAATCGTGGACAAAG+TGG | + | chr5_4:17760257-17760276 | None:intergenic | 30.0% | |
! | AACTTTATTTGTCATCCAAC+AGG | - | chr5_4:17760289-17760308 | Msa0841460:intron | 30.0% |
CTTTACATGTATCTGTGTAA+AGG | + | chr5_4:17760371-17760390 | None:intergenic | 30.0% | |
CTTTACACAGATACATGTAA+AGG | - | chr5_4:17760369-17760388 | Msa0841460:intron | 30.0% | |
!!! | TGCCAAGAAAGTGTTTTAAA+AGG | + | chr5_4:17760456-17760475 | None:intergenic | 30.0% |
!!! | CAGAAGCTAAAAAAGCATTT+TGG | + | chr5_4:17760604-17760623 | None:intergenic | 30.0% |
! | AATCTGAAGCTTCATATCAA+GGG | + | chr5_4:17760671-17760690 | None:intergenic | 30.0% |
GAGTTAATCAAAATGTGCTA+TGG | + | chr5_4:17760846-17760865 | None:intergenic | 30.0% | |
!!! | ACTACCTAGTTTTGCTATTA+GGG | - | chr5_4:17760883-17760902 | Msa0841460:intron | 30.0% |
! | GCCAGATAAAAGAAGATTTT+AGG | - | chr5_4:17760954-17760973 | Msa0841460:intron | 30.0% |
! | CCCTAAAATCTTCTTTTATC+TGG | + | chr5_4:17760958-17760977 | None:intergenic | 30.0% |
CTATCTTCTATATCACATAG+AGG | - | chr5_4:17761225-17761244 | Msa0841460:CDS | 30.0% | |
GGCAAAAATAAAGTTAAGAG+CGG | + | chr5_4:17761295-17761314 | None:intergenic | 30.0% | |
! | AAAAGCTTTTGGACAAACTA+TGG | + | chr5_4:17761362-17761381 | None:intergenic | 30.0% |
! | ATAGTTTGGGAAAAAGCTTT+TGG | + | chr5_4:17761373-17761392 | None:intergenic | 30.0% |
! | TTTTCCCAAACTATAGCTTT+TGG | - | chr5_4:17761379-17761398 | Msa0841460:intron | 30.0% |
AATGCCAAAAGCTATAGTTT+GGG | + | chr5_4:17761386-17761405 | None:intergenic | 30.0% | |
ACGGTTATGTTGTTGATATA+AGG | + | chr5_4:17761565-17761584 | None:intergenic | 30.0% | |
ATATCAACAACATAACCGTT+TGG | - | chr5_4:17761566-17761585 | Msa0841460:CDS | 30.0% | |
! | AAATTGCCATTTCACATCTA+GGG | + | chr5_4:17761971-17761990 | None:intergenic | 30.0% |
TTCCCTAAAATGACAAAAAC+AGG | + | chr5_4:17762161-17762180 | None:intergenic | 30.0% | |
!!! | TGTTTTTGTCATTTTAGGGA+AGG | - | chr5_4:17762160-17762179 | Msa0841460:intron | 30.0% |
!!! | GTTTTTGTCATTTTAGGGAA+GGG | - | chr5_4:17762161-17762180 | Msa0841460:intron | 30.0% |
!!! | TTTTTGTCATTTTAGGGAAG+GGG | - | chr5_4:17762162-17762181 | Msa0841460:intron | 30.0% |
GAAATTGGATAATGTTTGCA+TGG | + | chr5_4:17762589-17762608 | None:intergenic | 30.0% | |
AAAGAAGATGCTTGAGAAAT+TGG | + | chr5_4:17762604-17762623 | None:intergenic | 30.0% | |
AATTTCTCAAGCATCTTCTT+TGG | - | chr5_4:17762603-17762622 | Msa0841460:intron | 30.0% | |
ATTTCTCAAGCATCTTCTTT+GGG | - | chr5_4:17762604-17762623 | Msa0841460:intron | 30.0% | |
TTTGATATCCAACGTCTTTA+TGG | + | chr5_4:17762741-17762760 | None:intergenic | 30.0% | |
!!! | ATCGTGAATATTTTTGGCAT+TGG | - | chr5_4:17762864-17762883 | Msa0841460:intron | 30.0% |
!!! | TCGTGAATATTTTTGGCATT+GGG | - | chr5_4:17762865-17762884 | Msa0841460:intron | 30.0% |
CTTCTTTATCTTGACGAAAT+GGG | + | chr5_4:17762903-17762922 | None:intergenic | 30.0% | |
TCTTCTTTATCTTGACGAAA+TGG | + | chr5_4:17762904-17762923 | None:intergenic | 30.0% | |
TTCCTGCCAAGAAAAAAAAA+GGG | - | chr5_4:17762943-17762962 | Msa0841460:CDS | 30.0% | |
!! | TTGGTTCTATAAGTGATACT+GGG | + | chr5_4:17763015-17763034 | None:intergenic | 30.0% |
!!! | TAACTAATACAGGGGTATTT+TGG | + | chr5_4:17763086-17763105 | None:intergenic | 30.0% |
ATGTTAGCTAACTAATACAG+GGG | + | chr5_4:17763094-17763113 | None:intergenic | 30.0% | |
GATGTTAGCTAACTAATACA+GGG | + | chr5_4:17763095-17763114 | None:intergenic | 30.0% | |
TCAGTGTGTTTAAGTGATTA+CGG | + | chr5_4:17763191-17763210 | None:intergenic | 30.0% | |
CAACAATACAGACACAAATT+CGG | - | chr5_4:17763338-17763357 | Msa0841460:intron | 30.0% | |
! | GGTTTCATAATTCTAGGAAT+TGG | + | chr5_4:17763462-17763481 | None:intergenic | 30.0% |
!! | TTGAAAAGGTGTTTATGAGT+AGG | + | chr5_4:17763620-17763639 | None:intergenic | 30.0% |
! | CAAGTTTAGAACACTATGAA+AGG | - | chr5_4:17763782-17763801 | Msa0841460:intron | 30.0% |
!! | GAGTGCATAGTATTTTTGTA+AGG | - | chr5_4:17764041-17764060 | Msa0841460:intron | 30.0% |
!!! | CACATCTGACTTTTTTTTGT+TGG | + | chr5_4:17764145-17764164 | None:intergenic | 30.0% |
CAACAAAAAAAAGTCAGATG+TGG | - | chr5_4:17764143-17764162 | Msa0841460:intron | 30.0% | |
!! | TGTTTTAGGTCCCTATAAAT+AGG | + | chr5_4:17764297-17764316 | None:intergenic | 30.0% |
TTTCAAGCACTTAGAAAATG+TGG | + | chr5_4:17764368-17764387 | None:intergenic | 30.0% | |
!! | AAAATGCTACTTTGATGTGA+TGG | - | chr5_4:17764702-17764721 | Msa0841460:intron | 30.0% |
! | GTTAGTTTACCTTGATATGA+TGG | - | chr5_4:17764724-17764743 | Msa0841460:intron | 30.0% |
! | CTGATCAAGTTTTTGTTCAA+TGG | + | chr5_4:17765063-17765082 | Msa0841470:five_prime_UTR | 30.0% |
! | TTAACTTTTGCATAGGTACT+GGG | + | chr5_4:17765178-17765197 | Msa0841470:intron | 30.0% |
!! | TTTAACTTTTGCATAGGTAC+TGG | + | chr5_4:17765179-17765198 | Msa0841470:intron | 30.0% |
AAAAGATAACAGACGAATGA+AGG | - | chr5_4:17765249-17765268 | Msa0841460:intron | 30.0% | |
AAAGATAACAGACGAATGAA+GGG | - | chr5_4:17765250-17765269 | Msa0841460:intron | 30.0% | |
GATTAAAATTAGACCTGAAG+TGG | + | chr5_4:17765438-17765457 | Msa0841470:intron | 30.0% | |
TTGGACTACTTTAATTGCAA+TGG | + | chr5_4:17765480-17765499 | Msa0841470:intron | 30.0% | |
AATTAAAGTAGTCCAAACTG+AGG | - | chr5_4:17765484-17765503 | Msa0841460:intron | 30.0% | |
AGTCATATATAACCTCAGTT+TGG | + | chr5_4:17765499-17765518 | Msa0841470:intron | 30.0% | |
GAAATGAAAACAGAAAACAC+GGG | + | chr5_4:17765759-17765778 | Msa0841470:CDS | 30.0% | |
GGAAATGAAAACAGAAAACA+CGG | + | chr5_4:17765760-17765779 | Msa0841470:CDS | 30.0% | |
! | CTCGTGTTTATTAGTTTAAG+TGG | + | chr5_4:17765781-17765800 | Msa0841470:CDS | 30.0% |
AAACAGAAATGCCAAAACAT+TGG | - | chr5_4:17765847-17765866 | Msa0841460:intron | 30.0% | |
ATTGTGATAGAGAATATGGA+AGG | + | chr5_4:17765909-17765928 | Msa0841470:intron | 30.0% | |
! | AGTTTATATTTCTGCCATTC+TGG | + | chr5_4:17766114-17766133 | Msa0841470:CDS | 30.0% |
! | TTGCTTGCTTAAGTGTATTT+TGG | + | chr5_4:17766256-17766275 | Msa0841470:intron | 30.0% |
! | AATTCTTTTCACATCCAAAC+AGG | - | chr5_4:17766376-17766395 | Msa0841460:intron | 30.0% |
GCAATATTAGATTGCATAGT+TGG | + | chr5_4:17766541-17766560 | Msa0841470:intron | 30.0% | |
!! | ATTGTTGTTTATAGAGTGTG+GGG | + | chr5_4:17766572-17766591 | Msa0841470:intron | 30.0% |
TCTTCAAAAAGCTCTATTGT+TGG | + | chr5_4:17766696-17766715 | Msa0841470:intron | 30.0% | |
TTTGATATGGATGGAAAAGA+AGG | - | chr5_4:17766858-17766877 | Msa0841460:intron | 30.0% | |
!!! | ACCCTTATTATTTTAGGATC+AGG | + | chr5_4:17766899-17766918 | Msa0841470:intron | 30.0% |
ATTCATGTCATATATCGTAG+CGG | + | chr5_4:17766959-17766978 | Msa0841470:intron | 30.0% | |
!! | TTTTGTTGTCATCTTGATCT+TGG | + | chr5_4:17766990-17767009 | Msa0841470:intron | 30.0% |
ACAGTTTCAAGACTTTAAGT+TGG | - | chr5_4:17767086-17767105 | Msa0841460:intron | 30.0% | |
AAGCATGTATTCATATCACA+AGG | - | chr5_4:17767176-17767195 | Msa0841460:intron | 30.0% | |
! | GATTTTGTACTTACTTTGCA+AGG | - | chr5_4:17767281-17767300 | Msa0841460:intron | 30.0% |
AAACTGTATCCGAAAAATAG+AGG | + | chr5_4:17767430-17767449 | Msa0841470:intron | 30.0% | |
! | ATTCATTTCGCATTTTGTGT+TGG | + | chr5_4:17767543-17767562 | Msa0841470:intron | 30.0% |
AAGTTTCTTTCACCAAAGAA+AGG | + | chr5_4:17767822-17767841 | Msa0841470:three_prime_UTR | 30.0% | |
TGAGTTTAACTCAGTTTGTA+AGG | - | chr5_4:17768079-17768098 | Msa0841460:intron | 30.0% | |
!!! | TTTTTTTTTTGTGCTGCTCA+GGG | + | chr5_4:17768140-17768159 | None:intergenic | 30.0% |
!!! | ATTTTTTTTTTGTGCTGCTC+AGG | + | chr5_4:17768141-17768160 | None:intergenic | 30.0% |
TTAAAAGAAGAGGTCAAAAG+TGG | - | chr5_4:17768211-17768230 | Msa0841460:intron | 30.0% | |
! | TAAAATTTTCCTTCCACCTT+TGG | + | chr5_4:17768256-17768275 | None:intergenic | 30.0% |
!!! | TCTTCTTTTAAGATAAGGTG+GGG | - | chr5_4:17768410-17768429 | Msa0841460:intron | 30.0% |
! | AACTACAACTTTTGCATGTA+TGG | - | chr5_4:17768446-17768465 | Msa0841460:intron | 30.0% |
ATACTAACTAGTTAGGTTCA+TGG | - | chr5_4:17768479-17768498 | Msa0841460:intron | 30.0% | |
! | AAAAGAGTTAGGGTGATTTT+GGG | + | chr5_4:17768702-17768721 | None:intergenic | 30.0% |
! | AAAAAGAGTTAGGGTGATTT+TGG | + | chr5_4:17768703-17768722 | None:intergenic | 30.0% |
GGAATGAGAAAAAAGAGTTA+GGG | + | chr5_4:17768712-17768731 | None:intergenic | 30.0% | |
GCATATCCAATTAATGACTT+TGG | - | chr5_4:17768894-17768913 | Msa0841460:intron | 30.0% | |
TTGAATATAGTCACATGTGT+AGG | - | chr5_4:17768961-17768980 | Msa0841460:intron | 30.0% | |
TTCACAAGGACGAAAAATAT+TGG | - | chr5_4:17769234-17769253 | Msa0841460:intron | 30.0% | |
ACTATTCCACATTAATCACA+TGG | + | chr5_4:17769405-17769424 | None:intergenic | 30.0% | |
TCAATTCCATCAAACATGAA+TGG | - | chr5_4:17769517-17769536 | Msa0841460:intron | 30.0% | |
AGGTGAAGAAACAATAAGTT+CGG | + | chr5_4:17758426-17758445 | None:intergenic | 30.0% | |
ATCATAATCATCTTCTTCCT+TGG | + | chr5_4:17769743-17769762 | None:intergenic | 30.0% | |
TCAACAAATTGAATTATCCC+AGG | - | chr5_4:17769825-17769844 | Msa0841460:intron | 30.0% | |
! | ATTGGTAATAGAGAGATAGA+TGG | - | chr5_4:17770530-17770549 | Msa0841460:intron | 30.0% |
! | TTATGTTTTGCAGTTACTTG+TGG | - | chr5_4:17770633-17770652 | Msa0841460:intron | 30.0% |
! | CTATGCCAATAACATAGTTT+TGG | - | chr5_4:17759540-17759559 | Msa0841460:intron | 30.0% |
GTTTGCCAAAACTATGTTAT+TGG | + | chr5_4:17759548-17759567 | None:intergenic | 30.0% | |
TCAATGTTTATGTGTATCTG+AGG | + | chr5_4:17759638-17759657 | None:intergenic | 30.0% | |
!! | ATTGATGTTTTGGGTGAAAT+AGG | - | chr5_4:17759653-17759672 | Msa0841460:CDS | 30.0% |
TTCATTAACAGAGTTAACCT+TGG | + | chr5_4:17759687-17759706 | None:intergenic | 30.0% | |
ACAGAGATTGTAAATATAGG+CGG | + | chr5_4:17759821-17759840 | None:intergenic | 30.0% | |
! | GTTCCAAGTTGGATTTAATA+TGG | - | chr5_4:17771064-17771083 | Msa0841460:intron | 30.0% |
TGTCCATATTAAATCCAACT+TGG | + | chr5_4:17771070-17771089 | None:intergenic | 30.0% | |
TTAATATGGACAGAACAACA+AGG | - | chr5_4:17771078-17771097 | Msa0841460:intron | 30.0% | |
TAATATGGACAGAACAACAA+GGG | - | chr5_4:17771079-17771098 | Msa0841460:intron | 30.0% | |
TTTGATGAGGAGATTAGATT+AGG | - | chr5_4:17759974-17759993 | Msa0841460:intron | 30.0% | |
AGCATATGTTGAAAATAACC+TGG | + | chr5_4:17771345-17771364 | None:intergenic | 30.0% | |
GAATATTAAGTCAAGCATAG+TGG | + | chr5_4:17771381-17771400 | None:intergenic | 30.0% | |
!! | AACTTTCTTTTTCATCCAAC+AGG | - | chr5_4:17771497-17771516 | Msa0841460:intron | 30.0% |
AAAAATGTTTGCATGGTAAC+CGG | + | chr5_4:17771535-17771554 | None:intergenic | 30.0% | |
CTTTACATGTATCTGTGTAA+AGG | + | chr5_4:17760371-17760390 | None:intergenic | 30.0% | |
CTTTACACAGATACATGTAA+AGG | - | chr5_4:17760369-17760388 | Msa0841460:intron | 30.0% | |
AAACTGAAGCTTCATTTCAA+GGG | + | chr5_4:17771879-17771898 | None:intergenic | 30.0% | |
ATATATGTCCAGAAATCCAT+AGG | - | chr5_4:17771912-17771931 | Msa0841460:intron | 30.0% | |
GAGTTAATCAAAATGTGCTA+TGG | + | chr5_4:17760846-17760865 | None:intergenic | 30.0% | |
!!! | ACTACCTAGTTTTGCTATTA+GGG | - | chr5_4:17760883-17760902 | Msa0841460:intron | 30.0% |
! | CTATATGACATAGAGGATTT+TGG | - | chr5_4:17772400-17772419 | Msa0841460:CDS | 30.0% |
! | AAAAGCTTTTGGACAAACTA+TGG | + | chr5_4:17761362-17761381 | None:intergenic | 30.0% |
! | ATAGTTTGGGAAAAAGCTTT+TGG | + | chr5_4:17761373-17761392 | None:intergenic | 30.0% |
GAATGCTAAAAGCTATAGTT+TGG | + | chr5_4:17772554-17772573 | None:intergenic | 30.0% | |
! | ATAGCTTTTAGCATTCCAAA+TGG | - | chr5_4:17772558-17772577 | Msa0841460:intron | 30.0% |
! | TAGCTTTTAGCATTCCAAAT+GGG | - | chr5_4:17772559-17772578 | Msa0841460:intron | 30.0% |
ACAGTTATGTTGTTGATGTA+AGG | + | chr5_4:17772734-17772753 | None:intergenic | 30.0% | |
ACATCAACAACATAACTGTT+TGG | - | chr5_4:17772735-17772754 | Msa0841460:CDS | 30.0% | |
!!! | GCTTTAGAAATTCTTTTGCA+TGG | - | chr5_4:17762102-17762121 | Msa0841460:CDS | 30.0% |
TTGTCGCCAATTTAATGTAA+AGG | - | chr5_4:17773401-17773420 | Msa0841460:intron | 30.0% | |
TTTAATGATTGCTGAGTTAC+TGG | - | chr5_4:17773508-17773527 | Msa0841460:intron | 30.0% | |
AATTCTCTACAAAAACTGGA+AGG | + | chr5_4:17773642-17773661 | None:intergenic | 30.0% | |
ACTAAACAGTGAAATCTGAT+TGG | - | chr5_4:17773800-17773819 | Msa0841460:intron | 30.0% | |
ATTTATATTGGGACTTGTGA+AGG | + | chr5_4:17774244-17774263 | None:intergenic | 30.0% | |
GTAATATAGCAAAACCACAA+AGG | - | chr5_4:17774282-17774301 | Msa0841460:CDS | 30.0% | |
ACGTTAGAAAACCGATAATT+TGG | - | chr5_4:17774307-17774326 | Msa0841460:CDS | 30.0% | |
AGAAAACCGATAATTTGGTT+TGG | - | chr5_4:17774312-17774331 | Msa0841460:CDS | 30.0% | |
AAAATTATTCCCACTGTTGT+TGG | - | chr5_4:17774380-17774399 | Msa0841460:CDS | 30.0% | |
AAATTATTCCCACTGTTGTT+GGG | - | chr5_4:17774381-17774400 | Msa0841460:CDS | 30.0% | |
ATCATACTCATCTTCTTCCT+TGG | + | chr5_4:17758537-17758556 | None:intergenic | 35.0% | |
TCAACGAATTGAATTATCCG+AGG | - | chr5_4:17758607-17758626 | Msa0841460:intron | 35.0% | |
AGCCTATGAAAACAGCTTAT+AGG | + | chr5_4:17758810-17758829 | None:intergenic | 35.0% | |
ATACGCAAATAGCAACACAA+TGG | - | chr5_4:17759084-17759103 | Msa0841460:intron | 35.0% | |
!! | AACACAATGGTTTGTTCACT+AGG | - | chr5_4:17759097-17759116 | Msa0841460:intron | 35.0% |
! | TGGCTCTTATTTGTGAAAAG+CGG | + | chr5_4:17759286-17759305 | None:intergenic | 35.0% |
AAGAGCCATAACAACATATG+TGG | - | chr5_4:17759298-17759317 | Msa0841460:intron | 35.0% | |
TTATGTTTGGCAGTTACTTG+TGG | - | chr5_4:17759444-17759463 | Msa0841460:CDS | 35.0% | |
! | CTTGTGGTGGAATCAATTTA+TGG | - | chr5_4:17759460-17759479 | Msa0841460:CDS | 35.0% |
GTTTATGTGTATCTGAGGAA+AGG | + | chr5_4:17759633-17759652 | None:intergenic | 35.0% | |
AAACATGTCAAAACAATCGG+TGG | + | chr5_4:17759770-17759789 | None:intergenic | 35.0% | |
AGATTGTAAATATAGGCGGT+TGG | + | chr5_4:17759817-17759836 | None:intergenic | 35.0% | |
! | GTTCCAAGTTGGATTCAATA+TGG | - | chr5_4:17759876-17759895 | Msa0841460:intron | 35.0% |
TGTCCATATTGAATCCAACT+TGG | + | chr5_4:17759882-17759901 | None:intergenic | 35.0% | |
TCAATATGGACAGAACAACA+AGG | - | chr5_4:17759890-17759909 | Msa0841460:intron | 35.0% | |
CAATATGGACAGAACAACAA+GGG | - | chr5_4:17759891-17759910 | Msa0841460:intron | 35.0% | |
TGATTTACAGTTGGGTAGAA+TGG | - | chr5_4:17759921-17759940 | Msa0841460:intron | 35.0% | |
! | TTCTCATTTGGGATTTGATG+AGG | - | chr5_4:17759961-17759980 | Msa0841460:intron | 35.0% |
GAGATTAGATTAGGTCCTTA+TGG | - | chr5_4:17759983-17760002 | Msa0841460:intron | 35.0% | |
!! | GTTTGCTATAGTGAATATCC+AGG | - | chr5_4:17760136-17760155 | Msa0841460:intron | 35.0% |
CGGCAAAAAAAATGTTTGCA+TGG | + | chr5_4:17760334-17760353 | None:intergenic | 35.0% | |
ACACAGATACATGTAAAGGA+AGG | - | chr5_4:17760373-17760392 | Msa0841460:intron | 35.0% | |
ATGTCTTGATGCAAAATGCA+AGG | - | chr5_4:17760414-17760433 | Msa0841460:intron | 35.0% | |
!!! | AGAAAGTGTTTTAAAAGGCC+TGG | + | chr5_4:17760451-17760470 | None:intergenic | 35.0% |
!!! | GGCCTTTTAAAACACTTTCT+TGG | - | chr5_4:17760451-17760470 | Msa0841460:intron | 35.0% |
CTAACATCATAGATTCCCAA+CGG | + | chr5_4:17760492-17760511 | None:intergenic | 35.0% | |
! | GAATCTGAAGCTTCATATCA+AGG | + | chr5_4:17760672-17760691 | None:intergenic | 35.0% |
TATGAAGCTTCAGATTCTTC+AGG | - | chr5_4:17760675-17760694 | Msa0841460:intron | 35.0% | |
! | TAGGAGCTGCTTCATTTTAT+TGG | - | chr5_4:17760723-17760742 | Msa0841460:intron | 35.0% |
!!! | CACTACCTAGTTTTGCTATT+AGG | - | chr5_4:17760882-17760901 | Msa0841460:intron | 35.0% |
ATTGCCCTAATAGCAAAACT+AGG | + | chr5_4:17760890-17760909 | None:intergenic | 35.0% | |
CTACATCATCTAGCAAAAAC+TGG | + | chr5_4:17760926-17760945 | None:intergenic | 35.0% | |
AAGGGAGATTCAAACATGAT+TGG | + | chr5_4:17761325-17761344 | None:intergenic | 35.0% | |
! | CTTTTGGACAAACTATGGTT+TGG | + | chr5_4:17761357-17761376 | None:intergenic | 35.0% |
GAATGCCAAAAGCTATAGTT+TGG | + | chr5_4:17761387-17761406 | None:intergenic | 35.0% | |
! | ATAGCTTTTGGCATTCCAAA+TGG | - | chr5_4:17761391-17761410 | Msa0841460:intron | 35.0% |
! | TAGCTTTTGGCATTCCAAAT+GGG | - | chr5_4:17761392-17761411 | Msa0841460:intron | 35.0% |
! | CCACAAATTTCCGAAGTTTT+TGG | + | chr5_4:17761495-17761514 | None:intergenic | 35.0% |
CCAAAAACTTCGGAAATTTG+TGG | - | chr5_4:17761492-17761511 | Msa0841460:CDS | 35.0% | |
!!! | TGTTTTGATGTGAGTTTGGT+CGG | - | chr5_4:17761717-17761736 | Msa0841460:intron | 35.0% |
! | GAAAAATTGAAGCCTTTTCC+AGG | + | chr5_4:17761820-17761839 | None:intergenic | 35.0% |
! | GGAAAAGGCTTCAATTTTTC+TGG | - | chr5_4:17761820-17761839 | Msa0841460:CDS | 35.0% |
!! | ATTTTGACGATCCTATGACA+AGG | + | chr5_4:17761853-17761872 | None:intergenic | 35.0% |
TCGTTTAAAGGGGAATCAAA+GGG | - | chr5_4:17761878-17761897 | Msa0841460:CDS | 35.0% | |
! | GAAATTGCCATTTCACATCT+AGG | + | chr5_4:17761972-17761991 | None:intergenic | 35.0% |
GGTTGTAACAAAATGAAGTG+CGG | - | chr5_4:17762002-17762021 | Msa0841460:intron | 35.0% | |
AAAATGAAGTGCGGTAATTG+TGG | - | chr5_4:17762011-17762030 | Msa0841460:intron | 35.0% | |
CTTTACTCATCAGATCCATA+TGG | - | chr5_4:17762065-17762084 | Msa0841460:intron | 35.0% | |
!!! | TTTTGTCATTTTAGGGAAGG+GGG | - | chr5_4:17762163-17762182 | Msa0841460:intron | 35.0% |
! | TTTTATCAAAATCCAAGGCG+AGG | + | chr5_4:17762244-17762263 | None:intergenic | 35.0% |
TCACATATGTAAGTGATCCT+TGG | + | chr5_4:17762371-17762390 | None:intergenic | 35.0% | |
! | AATTTTCATGAAGACCGTGA+AGG | - | chr5_4:17762556-17762575 | Msa0841460:intron | 35.0% |
GTTCCTGCCAAGAAAAAAAA+AGG | - | chr5_4:17762942-17762961 | Msa0841460:CDS | 35.0% | |
!! | CTTGGTTCTATAAGTGATAC+TGG | + | chr5_4:17763016-17763035 | None:intergenic | 35.0% |
CGATGTTAGCTAACTAATAC+AGG | + | chr5_4:17763096-17763115 | None:intergenic | 35.0% | |
TCCAAATTACACAAATTCGC+CGG | - | chr5_4:17763158-17763177 | Msa0841460:CDS | 35.0% | |
CAGTGTGTTTAAGTGATTAC+GGG | + | chr5_4:17763190-17763209 | None:intergenic | 35.0% | |
!! | GGGTTGGTTCGAATTAATAT+GGG | + | chr5_4:17763483-17763502 | None:intergenic | 35.0% |
!! | TGGGTTGGTTCGAATTAATA+TGG | + | chr5_4:17763484-17763503 | None:intergenic | 35.0% |
TTACTCTTTGGTTGATCTGT+AGG | + | chr5_4:17763550-17763569 | None:intergenic | 35.0% | |
!! | AAAAGGTGTTTATGAGTAGG+AGG | + | chr5_4:17763617-17763636 | None:intergenic | 35.0% |
! | ATTGTTGCTGATTGAGCAAA+CGG | + | chr5_4:17764186-17764205 | None:intergenic | 35.0% |
TTGCTAACGGAAAAAAACGT+TGG | - | chr5_4:17764224-17764243 | Msa0841460:intron | 35.0% | |
TGCTAACGGAAAAAAACGTT+GGG | - | chr5_4:17764225-17764244 | Msa0841460:intron | 35.0% | |
TATGAATGTTGTTCTTTGCC+CGG | + | chr5_4:17764534-17764553 | None:intergenic | 35.0% | |
ACCTAACAACAACAAAGCAT+AGG | - | chr5_4:17764556-17764575 | Msa0841460:intron | 35.0% | |
!! | TCCTATGCTTTGTTGTTGTT+AGG | + | chr5_4:17764560-17764579 | None:intergenic | 35.0% |
GGACAAAATCACAAAAACAC+TGG | - | chr5_4:17764577-17764596 | Msa0841460:intron | 35.0% | |
! | CAAAGTAGCATTTTCGTTCA+TGG | + | chr5_4:17764696-17764715 | None:intergenic | 35.0% |
CACATCAAACCATCATATCA+AGG | + | chr5_4:17764736-17764755 | None:intergenic | 35.0% | |
GATATGATGGTTTGATGTGA+TGG | - | chr5_4:17764737-17764756 | Msa0841460:intron | 35.0% | |
TTACATGAGTCTACCAACAT+AGG | - | chr5_4:17765006-17765025 | Msa0841460:intron | 35.0% | |
TAGCCAAATAAGGATAGACA+TGG | - | chr5_4:17765407-17765426 | Msa0841460:intron | 35.0% | |
CATGAAGATTTATCGTAGCA+GGG | + | chr5_4:17765531-17765550 | Msa0841470:intron | 35.0% | |
TCATGAAGATTTATCGTAGC+AGG | + | chr5_4:17765532-17765551 | Msa0841470:intron | 35.0% | |
AGAAAACACGGGAAGTAAAT+GGG | + | chr5_4:17765748-17765767 | Msa0841470:CDS | 35.0% | |
!! | CTTATCAAAGTCGGTGTTTT+CGG | + | chr5_4:17766149-17766168 | Msa0841470:intron | 35.0% |
AAGAAACCTACATGGAATCA+GGG | - | chr5_4:17766274-17766293 | Msa0841460:intron | 35.0% | |
! | GACAGGATTAGTATGTGTAA+GGG | + | chr5_4:17766481-17766500 | Msa0841470:intron | 35.0% |
!! | TTGTTGTTTATAGAGTGTGG+GGG | + | chr5_4:17766571-17766590 | Msa0841470:intron | 35.0% |
TCTATTGTTGGAAAACTCTC+TGG | + | chr5_4:17766684-17766703 | Msa0841470:intron | 35.0% | |
TGCCAATAGATTAAGCATCT+CGG | - | chr5_4:17766778-17766797 | Msa0841460:intron | 35.0% | |
TATGGATGGAAAAGAAGGAA+AGG | - | chr5_4:17766863-17766882 | Msa0841460:intron | 35.0% | |
TTTGTACTTACTTTGCAAGG+TGG | - | chr5_4:17767284-17767303 | Msa0841460:intron | 35.0% | |
CATTGTCATTCTTGCAAAAG+TGG | + | chr5_4:17767926-17767945 | Msa0841470:three_prime_UTR | 35.0% | |
!!! | TGCCAATTTTTTAGAGCCAA+AGG | - | chr5_4:17768237-17768256 | Msa0841460:intron | 35.0% |
!! | CACCTTTGGCTCTAAAAAAT+TGG | + | chr5_4:17768242-17768261 | None:intergenic | 35.0% |
!!! | CAATTTTTTAGAGCCAAAGG+TGG | - | chr5_4:17768240-17768259 | Msa0841460:intron | 35.0% |
! | AGGTGGAAGGAAAATTTTAG+AGG | - | chr5_4:17768257-17768276 | Msa0841460:intron | 35.0% |
GGGAATGAGAAAAAAGAGTT+AGG | + | chr5_4:17768713-17768732 | None:intergenic | 35.0% | |
GTTTGTTCATCGTCTTTATG+CGG | - | chr5_4:17768806-17768825 | Msa0841460:intron | 35.0% | |
TGTGACTATATTCAAGTCTC+TGG | + | chr5_4:17768956-17768975 | None:intergenic | 35.0% | |
ATGTGGAATAGTCAAAGTGA+AGG | - | chr5_4:17769413-17769432 | Msa0841460:intron | 35.0% | |
TGTGGAATAGTCAAAGTGAA+GGG | - | chr5_4:17769414-17769433 | Msa0841460:intron | 35.0% | |
! | GTTTGAAACATCATTAACGG+CGG | - | chr5_4:17769467-17769486 | Msa0841460:intron | 35.0% |
CTACTACCATTCATGTTTGA+TGG | + | chr5_4:17769526-17769545 | None:intergenic | 35.0% | |
!! | GTTGTTGTTGTGATTTGTTG+CGG | + | chr5_4:17769555-17769574 | None:intergenic | 35.0% |
ATTGATTGTGATCTCTTCCT+GGG | + | chr5_4:17769845-17769864 | None:intergenic | 35.0% | |
TACGCAAATAGCAACAACAA+CGG | - | chr5_4:17770271-17770290 | Msa0841460:intron | 35.0% | |
CTACAACGTAATTATGTCTC+CGG | - | chr5_4:17770309-17770328 | Msa0841460:intron | 35.0% | |
! | TGGCTCTTATTTGTGAAAAG+CGG | + | chr5_4:17759286-17759305 | None:intergenic | 35.0% |
AAGAGCCATAACAACATATG+TGG | - | chr5_4:17759298-17759317 | Msa0841460:intron | 35.0% | |
AGATAGATGGACGTGATATT+TGG | - | chr5_4:17770543-17770562 | Msa0841460:intron | 35.0% | |
GTTTATGTGTATCTGAGGAA+AGG | + | chr5_4:17759633-17759652 | None:intergenic | 35.0% | |
AAACATGTCAAAACAATCGG+TGG | + | chr5_4:17759770-17759789 | None:intergenic | 35.0% | |
AGATTGTAAATATAGGCGGT+TGG | + | chr5_4:17759817-17759836 | None:intergenic | 35.0% | |
TGATTTACAGTTGGGTAGAA+TGG | - | chr5_4:17759921-17759940 | Msa0841460:intron | 35.0% | |
! | TTCTCATTTGGGATTTGATG+AGG | - | chr5_4:17759961-17759980 | Msa0841460:intron | 35.0% |
GAGATTAGATTAGGTCCTTA+TGG | - | chr5_4:17759983-17760002 | Msa0841460:intron | 35.0% | |
!! | GTTTGCTATAGTGAATATCC+AGG | - | chr5_4:17760136-17760155 | Msa0841460:intron | 35.0% |
!! | TAATTTGATTTGAGCAAGCG+CGG | + | chr5_4:17771421-17771440 | None:intergenic | 35.0% |
AGTGAAAGACATAACAACCA+TGG | + | chr5_4:17771451-17771470 | None:intergenic | 35.0% | |
CGGCAAAAAAAATGTTTGCA+TGG | + | chr5_4:17760334-17760353 | None:intergenic | 35.0% | |
TAAAGGTCTGTAAGCATTTG+CGG | + | chr5_4:17771562-17771581 | None:intergenic | 35.0% | |
ACACAGATACATGTAAAGGA+AGG | - | chr5_4:17760373-17760392 | Msa0841460:intron | 35.0% | |
ATGTCTTGATGCAAAATGCA+AGG | - | chr5_4:17760414-17760433 | Msa0841460:intron | 35.0% | |
!!! | AGAAAGTGTTTTAAAAGGCC+TGG | + | chr5_4:17760451-17760470 | None:intergenic | 35.0% |
!!! | GGCCTTTTAAAACACTTTCT+TGG | - | chr5_4:17760451-17760470 | Msa0841460:intron | 35.0% |
!!! | CGCCAAGAAAGTGTTTTAAA+AGG | + | chr5_4:17771664-17771683 | None:intergenic | 35.0% |
!! | TTAGCTTTTGTAACCTTTGC+AGG | - | chr5_4:17771822-17771841 | Msa0841460:intron | 35.0% |
! | TAGCTTTTGTAACCTTTGCA+GGG | - | chr5_4:17771823-17771842 | Msa0841460:intron | 35.0% |
GAAACTGAAGCTTCATTTCA+AGG | + | chr5_4:17771880-17771899 | None:intergenic | 35.0% | |
AATGAAGCTTCAGTTTCTTC+AGG | - | chr5_4:17771883-17771902 | Msa0841460:intron | 35.0% | |
ATAAAATGAAGCAGCTCCTA+TGG | + | chr5_4:17760723-17760742 | None:intergenic | 35.0% | |
TAACCAGTGATGTCAAATAG+TGG | - | chr5_4:17772021-17772040 | Msa0841460:intron | 35.0% | |
!!! | CACTACCTAGTTTTGCTATT+AGG | - | chr5_4:17760882-17760901 | Msa0841460:intron | 35.0% |
ATTGCCCTAATAGCAAAACT+AGG | + | chr5_4:17760890-17760909 | None:intergenic | 35.0% | |
!! | TTTCTAAAGCCCCTAAAAAC+TGG | + | chr5_4:17772134-17772153 | None:intergenic | 35.0% |
ATTTGAAGAATCTGCATGTG+TGG | - | chr5_4:17772160-17772179 | Msa0841460:CDS | 35.0% | |
TGCAAGGTTTACATATTGCA+AGG | + | chr5_4:17772270-17772289 | None:intergenic | 35.0% | |
TCATATAGCAGATAGTGTTG+CGG | + | chr5_4:17772388-17772407 | None:intergenic | 35.0% | |
CTATCTGCTATATGACATAG+AGG | - | chr5_4:17772393-17772412 | Msa0841460:CDS | 35.0% | |
GGCAAAGATTAAGTTAAGAG+CGG | + | chr5_4:17772462-17772481 | None:intergenic | 35.0% | |
AAGGGAGATTCAAACATGAT+TGG | + | chr5_4:17761325-17761344 | None:intergenic | 35.0% | |
! | CTTTTGGACAAACTATGGTT+TGG | + | chr5_4:17761357-17761376 | None:intergenic | 35.0% |
!! | ATTTTGACGATCCTATGACA+AGG | + | chr5_4:17761853-17761872 | None:intergenic | 35.0% |
AAATCGCCATACCACAAAAA+GGG | + | chr5_4:17773075-17773094 | None:intergenic | 35.0% | |
AATTGTCAACCATTTCTCGT+GGG | + | chr5_4:17773299-17773318 | None:intergenic | 35.0% | |
!! | CATGTATTTGTTGTACTTCC+TGG | + | chr5_4:17773344-17773363 | None:intergenic | 35.0% |
ACATTAAATTGGCGACAACT+AGG | + | chr5_4:17773399-17773418 | None:intergenic | 35.0% | |
GCTCCAAAGACTAAAATGAA+TGG | - | chr5_4:17773485-17773504 | Msa0841460:intron | 35.0% | |
!! | AGACTTGTGGTTCTAGTATT+GGG | - | chr5_4:17773556-17773575 | Msa0841460:intron | 35.0% |
GTTTACAAGAGCAATATCAC+AGG | + | chr5_4:17773586-17773605 | None:intergenic | 35.0% | |
CTGATACACAGTGTAAATGT+CGG | + | chr5_4:17773968-17773987 | None:intergenic | 35.0% | |
! | AATGTGCTTTTGCTACTCAA+AGG | - | chr5_4:17774032-17774051 | Msa0841460:intron | 35.0% |
GGATCAATTTCTCAAAGAGA+TGG | + | chr5_4:17774198-17774217 | None:intergenic | 35.0% | |
TAAGGAAGTGAACTTTGATG+TGG | + | chr5_4:17774219-17774238 | None:intergenic | 35.0% | |
! | GTTTTCTAACGTTACCTTTG+TGG | + | chr5_4:17774299-17774318 | None:intergenic | 35.0% |
! | ATTTTCTTGTAGTGAGTCAC+AGG | + | chr5_4:17774427-17774446 | None:intergenic | 35.0% |
! | AACGTAGCGTTGTTTCGATT+TGG | + | chr5_4:17758396-17758415 | None:intergenic | 40.0% |
TGTTTCTTCACCTAACTCTG+TGG | - | chr5_4:17758433-17758452 | Msa0841460:intron | 40.0% | |
ATAACATCCTCAGAGGAAAC+TGG | + | chr5_4:17758470-17758489 | None:intergenic | 40.0% | |
GTTGACAATAACATCCTCAG+AGG | + | chr5_4:17758477-17758496 | None:intergenic | 40.0% | |
TGATCAATTGCAGCAAGATG+AGG | - | chr5_4:17758646-17758665 | Msa0841460:intron | 40.0% | |
CACAATAAGCTATTCCAAGC+AGG | - | chr5_4:17758912-17758931 | Msa0841460:intron | 40.0% | |
TAGAAGTGATGACATGTGCT+AGG | - | chr5_4:17758976-17758995 | Msa0841460:intron | 40.0% | |
CTACAACGTAATTATGTCCC+CGG | - | chr5_4:17759122-17759141 | Msa0841460:intron | 40.0% | |
AGCCATAACAACATATGTGG+CGG | - | chr5_4:17759301-17759320 | Msa0841460:intron | 40.0% | |
AGATAGATGGACGTGACATT+TGG | - | chr5_4:17759354-17759373 | Msa0841460:intron | 40.0% | |
GAAAAATACCATTGCACTCG+TGG | - | chr5_4:17759394-17759413 | Msa0841460:CDS | 40.0% | |
! | ACGTTTTCAGCCTTGATACA+TGG | - | chr5_4:17759488-17759507 | Msa0841460:CDS | 40.0% |
TTCAGCCTTGATACATGGAA+AGG | - | chr5_4:17759493-17759512 | Msa0841460:CDS | 40.0% | |
TGAAATAGGCATTACTGCCA+AGG | - | chr5_4:17759667-17759686 | Msa0841460:CDS | 40.0% | |
TACAATCTCTGTTAAGTGGC+TGG | - | chr5_4:17759829-17759848 | Msa0841460:intron | 40.0% | |
GCAGGAAGTGATTTACAGTT+GGG | - | chr5_4:17759913-17759932 | Msa0841460:intron | 40.0% | |
TTATGGTGTGAATCGTATCG+CGG | - | chr5_4:17760000-17760019 | Msa0841460:intron | 40.0% | |
AAAATCGTGGACAAAGTGGA+AGG | + | chr5_4:17760253-17760272 | None:intergenic | 40.0% | |
!!! | AAGTGTTTTAAAAGGCCTGG+CGG | + | chr5_4:17760448-17760467 | None:intergenic | 40.0% |
AAGCAGCTCCTATAGATTTC+TGG | + | chr5_4:17760715-17760734 | None:intergenic | 40.0% | |
TTAACTCACCATCAAAACCG+CGG | - | chr5_4:17760859-17760878 | Msa0841460:intron | 40.0% | |
TCTAGCAAAAACTGGAGTAG+CGG | + | chr5_4:17760918-17760937 | None:intergenic | 40.0% | |
AGTGTAGCTTACATACTGCA+AGG | + | chr5_4:17761103-17761122 | None:intergenic | 40.0% | |
TCAAACATGATTGGCATAGC+TGG | + | chr5_4:17761316-17761335 | None:intergenic | 40.0% | |
TGTGTGTTTGGATTCCCATT+TGG | + | chr5_4:17761409-17761428 | None:intergenic | 40.0% | |
! | AATCTCAAAGGTACAGCTAG+TGG | + | chr5_4:17761621-17761640 | None:intergenic | 40.0% |
TGCACTTTGTCGTAGTTTCT+TGG | - | chr5_4:17761687-17761706 | Msa0841460:intron | 40.0% | |
TGTCAAAGTACATGTCTCTG+TGG | + | chr5_4:17761773-17761792 | None:intergenic | 40.0% | |
CTCGTTTAAAGGGGAATCAA+AGG | - | chr5_4:17761877-17761896 | Msa0841460:CDS | 40.0% | |
TAGGGCACAACTTGTAATCA+CGG | + | chr5_4:17761953-17761972 | None:intergenic | 40.0% | |
ATGGCAATTTCTCGAACTGA+AGG | - | chr5_4:17761981-17762000 | Msa0841460:intron | 40.0% | |
! | AGTAAAGTGCTTTGTTGCAG+AGG | + | chr5_4:17762052-17762071 | None:intergenic | 40.0% |
CAGATCCATATGGACATTAC+AGG | - | chr5_4:17762075-17762094 | Msa0841460:intron | 40.0% | |
CCATACCTGTAATGTCCATA+TGG | + | chr5_4:17762083-17762102 | None:intergenic | 40.0% | |
CCATATGGACATTACAGGTA+TGG | - | chr5_4:17762080-17762099 | Msa0841460:intron | 40.0% | |
!!! | TTTGTCATTTTAGGGAAGGG+GGG | - | chr5_4:17762164-17762183 | Msa0841460:intron | 40.0% |
AATTGTGAACCCTTACTCGT+GGG | + | chr5_4:17762204-17762223 | None:intergenic | 40.0% | |
GCTAGTCAATCATCAACTGT+TGG | + | chr5_4:17762320-17762339 | None:intergenic | 40.0% | |
ATTTGTATGCTCCAGCTTGA+GGG | - | chr5_4:17762408-17762427 | Msa0841460:intron | 40.0% | |
TGCATGGTTTATGTCCTTCA+CGG | + | chr5_4:17762573-17762592 | None:intergenic | 40.0% | |
CATCTTCTTTGGGTCGTTAT+CGG | - | chr5_4:17762614-17762633 | Msa0841460:intron | 40.0% | |
AAGGAGCTTGAACTCAGTTA+CGG | - | chr5_4:17762641-17762660 | Msa0841460:intron | 40.0% | |
TGTTATCTTCTGTCATCTGC+AGG | - | chr5_4:17762694-17762713 | Msa0841460:intron | 40.0% | |
GTTATCTTCTGTCATCTGCA+GGG | - | chr5_4:17762695-17762714 | Msa0841460:intron | 40.0% | |
GAATCACACCATAAAGACGT+TGG | - | chr5_4:17762730-17762749 | Msa0841460:intron | 40.0% | |
CTTTATCTTGACGAAATGGG+TGG | + | chr5_4:17762900-17762919 | None:intergenic | 40.0% | |
!!! | TGCCCTTTTTTTTTCTTGGC+AGG | + | chr5_4:17762948-17762967 | None:intergenic | 40.0% |
!!! | GTATTTTGGTCAGTTTGGCT+GGG | + | chr5_4:17763072-17763091 | None:intergenic | 40.0% |
ACCGGCGAATTTGTGTAATT+TGG | + | chr5_4:17763162-17763181 | None:intergenic | 40.0% | |
AAGTGATTACGGGTCATTAC+CGG | + | chr5_4:17763180-17763199 | None:intergenic | 40.0% | |
! | ATGCGTTACTTAAGTTGCAC+AGG | - | chr5_4:17763373-17763392 | Msa0841460:intron | 40.0% |
! | TGCGTTACTTAAGTTGCACA+GGG | - | chr5_4:17763374-17763393 | Msa0841460:intron | 40.0% |
!! | TTAAGTTGCACAGGGGTATT+TGG | - | chr5_4:17763382-17763401 | Msa0841460:intron | 40.0% |
!! | TAAGTTGCACAGGGGTATTT+GGG | - | chr5_4:17763383-17763402 | Msa0841460:intron | 40.0% |
TGCATGAAATGCGAGCATAT+GGG | + | chr5_4:17763503-17763522 | None:intergenic | 40.0% | |
TTGCATGAAATGCGAGCATA+TGG | + | chr5_4:17763504-17763523 | None:intergenic | 40.0% | |
CGCATTTCATGCAAAACTAG+TGG | - | chr5_4:17763510-17763529 | Msa0841460:intron | 40.0% | |
CAAACCAGATTGTATTGCGA+GGG | - | chr5_4:17763588-17763607 | Msa0841460:intron | 40.0% | |
ATCAGCAACAATTAACAGCG+AGG | - | chr5_4:17764194-17764213 | Msa0841460:intron | 40.0% | |
GCTAACGGAAAAAAACGTTG+GGG | - | chr5_4:17764226-17764245 | Msa0841460:intron | 40.0% | |
TTGGAAACGCGCCTATTTAT+AGG | - | chr5_4:17764283-17764302 | Msa0841460:intron | 40.0% | |
TGGAAACGCGCCTATTTATA+GGG | - | chr5_4:17764284-17764303 | Msa0841460:intron | 40.0% | |
AATCAGTGCGATCATGGAAT+TGG | - | chr5_4:17764600-17764619 | Msa0841460:intron | 40.0% | |
TCTACCAACATAGGTAGCTT+GGG | - | chr5_4:17765015-17765034 | Msa0841460:intron | 40.0% | |
!! | AGAGTATTGCAAGAGTGAGA+AGG | + | chr5_4:17765126-17765145 | Msa0841470:intron | 40.0% |
CCACCATGTCTATCCTTATT+TGG | + | chr5_4:17765413-17765432 | Msa0841470:intron | 40.0% | |
CCAAATAAGGATAGACATGG+TGG | - | chr5_4:17765410-17765429 | Msa0841460:intron | 40.0% | |
ATTTATCGTAGCAGGGAAGT+TGG | + | chr5_4:17765524-17765543 | Msa0841470:intron | 40.0% | |
CAGAAAACACGGGAAGTAAA+TGG | + | chr5_4:17765749-17765768 | Msa0841470:CDS | 40.0% | |
! | ATCTTTTCCACTTGCAGACT+GGG | + | chr5_4:17766053-17766072 | Msa0841470:CDS | 40.0% |
! | AATCTTTTCCACTTGCAGAC+TGG | + | chr5_4:17766054-17766073 | Msa0841470:CDS | 40.0% |
! | GCATGATTTGCAAACCAGAA+TGG | - | chr5_4:17766097-17766116 | Msa0841460:intron | 40.0% |
AAGCAAGCAAGAAACCTACA+TGG | - | chr5_4:17766266-17766285 | Msa0841460:intron | 40.0% | |
CAAGAAACCTACATGGAATC+AGG | - | chr5_4:17766273-17766292 | Msa0841460:intron | 40.0% | |
CCAAGGAACTCTTTCTGTTT+AGG | + | chr5_4:17766428-17766447 | Msa0841470:intron | 40.0% | |
CCTAAACAGAAAGAGTTCCT+TGG | - | chr5_4:17766425-17766444 | Msa0841460:intron | 40.0% | |
!! | GGCTTAGATTGCTTTTACCA+AGG | + | chr5_4:17766445-17766464 | Msa0841470:intron | 40.0% |
TGTAAGGGACTAGAGCAATA+TGG | + | chr5_4:17766466-17766485 | Msa0841470:intron | 40.0% | |
! | CGACAGGATTAGTATGTGTA+AGG | + | chr5_4:17766482-17766501 | Msa0841470:intron | 40.0% |
AGATTGCATAGTTGGTTACC+TGG | + | chr5_4:17766533-17766552 | Msa0841470:intron | 40.0% | |
TGGCAGTGTTACAGAAAGAT+AGG | + | chr5_4:17766763-17766782 | Msa0841470:intron | 40.0% | |
TGCCGAGATGCTTAATCTAT+TGG | + | chr5_4:17766783-17766802 | Msa0841470:intron | 40.0% | |
! | ATGTCATATATCGTAGCGGA+AGG | + | chr5_4:17766955-17766974 | Msa0841470:intron | 40.0% |
AAACTGTCTCTGATGGAAAG+AGG | + | chr5_4:17767073-17767092 | Msa0841470:intron | 40.0% | |
AGTCTTGAAACTGTCTCTGA+TGG | + | chr5_4:17767080-17767099 | Msa0841470:intron | 40.0% | |
CCTCTCTTTAGCATATGAGT+AGG | + | chr5_4:17767207-17767226 | Msa0841470:intron | 40.0% | |
CCTACTCATATGCTAAAGAG+AGG | - | chr5_4:17767204-17767223 | Msa0841460:intron | 40.0% | |
ACAAACCTATAGTGCTGTAG+CGG | - | chr5_4:17767392-17767411 | Msa0841460:intron | 40.0% | |
AAATTCCGCTACAGCACTAT+AGG | + | chr5_4:17767400-17767419 | Msa0841470:intron | 40.0% | |
TCCTAAAAATTGGTCACGAG+AGG | - | chr5_4:17767609-17767628 | Msa0841460:intron | 40.0% | |
! | TCCTCTCGTGACCAATTTTT+AGG | + | chr5_4:17767613-17767632 | Msa0841470:intron | 40.0% |
AAGAGACTCACCAAGAAATG+AGG | - | chr5_4:17767708-17767727 | Msa0841460:intron | 40.0% | |
TCACCAAGAAATGAGGAAGT+TGG | - | chr5_4:17767715-17767734 | Msa0841460:intron | 40.0% | |
! | TCTGTGAATCCACCAGTTTT+CGG | - | chr5_4:17767764-17767783 | Msa0841460:intron | 40.0% |
!!! | TTTTTAGAGCCAAAGGTGGA+AGG | - | chr5_4:17768244-17768263 | Msa0841460:intron | 40.0% |
! | GGATTAAATAAGGGTGTGCA+TGG | + | chr5_4:17768506-17768525 | None:intergenic | 40.0% |
CTCCTTTATCCACTAAAGAG+AGG | - | chr5_4:17768657-17768676 | Msa0841460:intron | 40.0% | |
! | CACCTCTCTTTAGTGGATAA+AGG | + | chr5_4:17768662-17768681 | None:intergenic | 40.0% |
ACGACGCCAAAGTCATTAAT+TGG | + | chr5_4:17768903-17768922 | None:intergenic | 40.0% | |
GAAACTTGAAATTGAGGAGG+AGG | - | chr5_4:17769489-17769508 | Msa0841460:intron | 40.0% | |
!! | GTTCGGATTTGTTAACGTAG+CGG | + | chr5_4:17758409-17758428 | None:intergenic | 40.0% |
TGTTTCTTCACCTAACTCTG+CGG | - | chr5_4:17758433-17758452 | Msa0841460:intron | 40.0% | |
TGTTGACATCAACAACCTCA+GGG | + | chr5_4:17769666-17769685 | None:intergenic | 40.0% | |
! | CATTGATTGTGATCTCTTCC+TGG | + | chr5_4:17769846-17769865 | None:intergenic | 40.0% |
TGATCAATTGCAGCAAGATG+AGG | - | chr5_4:17758646-17758665 | Msa0841460:intron | 40.0% | |
CACAATAAGCTATTCCAAGC+AGG | - | chr5_4:17758912-17758931 | Msa0841460:intron | 40.0% | |
TAGAAGTGATGACATGTGCT+AGG | - | chr5_4:17758976-17758995 | Msa0841460:intron | 40.0% | |
ACAACAACGGTTTATTCACG+AGG | - | chr5_4:17770284-17770303 | Msa0841460:intron | 40.0% | |
AGCCATAACAACATATGTGG+TGG | - | chr5_4:17759301-17759320 | Msa0841460:intron | 40.0% | |
CTCCACCACATATGTTGTTA+TGG | + | chr5_4:17770493-17770512 | None:intergenic | 40.0% | |
GAAAAATACCATTGCGCTCA+TGG | - | chr5_4:17770583-17770602 | Msa0841460:intron | 40.0% | |
! | TGTTTTGCAGTTACTTGTGG+TGG | - | chr5_4:17770636-17770655 | Msa0841460:intron | 40.0% |
! | ACGTTTTCAGCCTTGATACA+TGG | - | chr5_4:17759488-17759507 | Msa0841460:CDS | 40.0% |
TTCAGCCTTGATACATGGAA+AGG | - | chr5_4:17759493-17759512 | Msa0841460:CDS | 40.0% | |
TGAAATAGGCATTACTGCCA+AGG | - | chr5_4:17759667-17759686 | Msa0841460:CDS | 40.0% | |
TACAATCTCTGTTAAGTGGC+TGG | - | chr5_4:17759829-17759848 | Msa0841460:intron | 40.0% | |
GCAGGAAGTGATTTACAGTT+GGG | - | chr5_4:17759913-17759932 | Msa0841460:intron | 40.0% | |
ACAACACGATTCACACCATA+AGG | + | chr5_4:17771189-17771208 | None:intergenic | 40.0% | |
TTATGGTGTGAATCGTGTTG+TGG | - | chr5_4:17771188-17771207 | Msa0841460:intron | 40.0% | |
!! | AATTTGATTTGAGCAAGCGC+GGG | + | chr5_4:17771420-17771439 | None:intergenic | 40.0% |
CATGTAAAGGAAGGAAACGT+TGG | - | chr5_4:17771590-17771609 | Msa0841460:intron | 40.0% | |
!!! | AAGTGTTTTAAAAGGCCTGG+TGG | + | chr5_4:17760448-17760467 | None:intergenic | 40.0% |
! | ATACAGGGTGTTTCACATCT+CGG | + | chr5_4:17771761-17771780 | None:intergenic | 40.0% |
ATGTGAAACACCCTGTATAG+AGG | - | chr5_4:17771763-17771782 | Msa0841460:intron | 40.0% | |
ATCTGCATGTGTGGCAAATA+TGG | - | chr5_4:17772169-17772188 | Msa0841460:CDS | 40.0% | |
AAGGGAATGGACATATTGCA+AGG | + | chr5_4:17772286-17772305 | None:intergenic | 40.0% | |
CATATAGCAGATAGTGTTGC+GGG | + | chr5_4:17772387-17772406 | None:intergenic | 40.0% | |
TCAAACATGATTGGCATAGC+TGG | + | chr5_4:17761316-17761335 | None:intergenic | 40.0% | |
TGTGTGTTTGGATTCCCATT+TGG | + | chr5_4:17761409-17761428 | None:intergenic | 40.0% | |
AGTTAATGAGGAAATCCCAC+AGG | + | chr5_4:17772800-17772819 | None:intergenic | 40.0% | |
TGTCAAAGTACATGTCTCTG+TGG | + | chr5_4:17761773-17761792 | None:intergenic | 40.0% | |
CTCGTTTAAAGGGGAATCAA+AGG | - | chr5_4:17761877-17761896 | Msa0841460:CDS | 40.0% | |
GAAATCGCCATACCACAAAA+AGG | + | chr5_4:17773076-17773095 | None:intergenic | 40.0% | |
CTGGAGGTTGTAACAAAATG+AGG | - | chr5_4:17773101-17773120 | Msa0841460:CDS | 40.0% | |
GGTTGTAACAAAATGAGGTG+CGG | - | chr5_4:17773106-17773125 | Msa0841460:CDS | 40.0% | |
AAAATGAGGTGCGGTAATTG+TGG | - | chr5_4:17773115-17773134 | Msa0841460:CDS | 40.0% | |
CTTGACTCATCAGATCCATA+TGG | - | chr5_4:17773169-17773188 | Msa0841460:intron | 40.0% | |
CAGATCCATATGGACATTAC+AGG | - | chr5_4:17762075-17762094 | Msa0841460:intron | 40.0% | |
CCATACCTGTAATGTCCATA+TGG | + | chr5_4:17762083-17762102 | None:intergenic | 40.0% | |
CCATATGGACATTACAGGTA+TGG | - | chr5_4:17762080-17762099 | Msa0841460:intron | 40.0% | |
TGAATTGTACCCACGAGAAA+TGG | - | chr5_4:17773287-17773306 | Msa0841460:CDS | 40.0% | |
CAATTGTCAACCATTTCTCG+TGG | + | chr5_4:17773300-17773319 | None:intergenic | 40.0% | |
CACGAGAAATGGTTGACAAT+TGG | - | chr5_4:17773298-17773317 | Msa0841460:CDS | 40.0% | |
ACTGGACTAACAACAACATG+TGG | - | chr5_4:17773526-17773545 | Msa0841460:intron | 40.0% | |
!! | GAGACTTGTGGTTCTAGTAT+TGG | - | chr5_4:17773555-17773574 | Msa0841460:intron | 40.0% |
! | GTTTTGCACTGTACTAAGTC+AGG | + | chr5_4:17773904-17773923 | None:intergenic | 40.0% |
AGTACAGTGCAAAACCAGAA+AGG | - | chr5_4:17773909-17773928 | Msa0841460:intron | 40.0% | |
TTGGGACTTGTGAAGGAATA+AGG | + | chr5_4:17774237-17774256 | None:intergenic | 40.0% | |
TTCTTCACCTAACTCTGTGG+CGG | - | chr5_4:17758436-17758455 | Msa0841460:intron | 45.0% | |
TGAACAACCAGTTTCCTCTG+AGG | - | chr5_4:17758460-17758479 | Msa0841460:intron | 45.0% | |
TTCCTTGGAGTTGCTTGAAC+TGG | + | chr5_4:17758522-17758541 | None:intergenic | 45.0% | |
CTCCGCCACATATGTTGTTA+TGG | + | chr5_4:17759306-17759325 | None:intergenic | 45.0% | |
TGTTTGGCAGTTACTTGTGG+TGG | - | chr5_4:17759447-17759466 | Msa0841460:CDS | 45.0% | |
GCAGACCTTTCCATGTATCA+AGG | + | chr5_4:17759501-17759520 | None:intergenic | 45.0% | |
!! | GAAAGGTCTGCGTTGTTTTC+AGG | - | chr5_4:17759510-17759529 | Msa0841460:CDS | 45.0% |
! | TGGTGACTCGGATACAACTT+AGG | + | chr5_4:17759797-17759816 | None:intergenic | 45.0% |
!! | AATATAGGCGGTTGGTGACT+CGG | + | chr5_4:17759809-17759828 | None:intergenic | 45.0% |
GGCAGGAAGTGATTTACAGT+TGG | - | chr5_4:17759912-17759931 | Msa0841460:intron | 45.0% | |
GCGATACGATTCACACCATA+AGG | + | chr5_4:17760001-17760020 | None:intergenic | 45.0% | |
! | AGTGGAAGGCATAACAACCA+TGG | + | chr5_4:17760239-17760258 | None:intergenic | 45.0% |
GCATGGTAATCGGACGAATT+CGG | + | chr5_4:17760317-17760336 | None:intergenic | 45.0% | |
TAAAGGTCTGCAGGCATTTG+CGG | + | chr5_4:17760354-17760373 | None:intergenic | 45.0% | |
GTATCTGTGTAAAGGTCTGC+AGG | + | chr5_4:17760363-17760382 | None:intergenic | 45.0% | |
CAACGAAGAATACGACCGTT+GGG | - | chr5_4:17760474-17760493 | Msa0841460:intron | 45.0% | |
! | ATACAGGGCGTTTCACATCT+CGG | + | chr5_4:17760553-17760572 | None:intergenic | 45.0% |
ATGTGAAACGCCCTGTATAG+AGG | - | chr5_4:17760555-17760574 | Msa0841460:intron | 45.0% | |
TGGTCTTCCTCCTCTATACA+GGG | + | chr5_4:17760568-17760587 | None:intergenic | 45.0% | |
! | TTGGTCTTCCTCCTCTATAC+AGG | + | chr5_4:17760569-17760588 | None:intergenic | 45.0% |
!!! | ATTTTGGGCACTGAGCATGT+TGG | + | chr5_4:17760588-17760607 | None:intergenic | 45.0% |
TTAGCTTCTGTACCCTTTGC+AGG | - | chr5_4:17760614-17760633 | Msa0841460:intron | 45.0% | |
TAGCTTCTGTACCCTTTGCA+GGG | - | chr5_4:17760615-17760634 | Msa0841460:intron | 45.0% | |
TCATGCATGCAATGCCAACA+TGG | + | chr5_4:17760648-17760667 | None:intergenic | 45.0% | |
GACTTATTTCAACCGCCATG+CGG | - | chr5_4:17761181-17761200 | Msa0841460:CDS | 45.0% | |
!! | TAGCGGATTGCGGAAAATAG+AGG | + | chr5_4:17761263-17761282 | None:intergenic | 45.0% |
!! | GTGTTATCAGTAGCGGATTG+CGG | + | chr5_4:17761273-17761292 | None:intergenic | 45.0% |
!! | AAGAGCGGTGTTATCAGTAG+CGG | + | chr5_4:17761280-17761299 | None:intergenic | 45.0% |
ACATGTCTCTGTGGACATCA+TGG | + | chr5_4:17761764-17761783 | None:intergenic | 45.0% | |
CTGGATTTCGTCCTTGTCAT+AGG | - | chr5_4:17761839-17761858 | Msa0841460:CDS | 45.0% | |
GTTGTGCCCTAGATGTGAAA+TGG | - | chr5_4:17761962-17761981 | Msa0841460:intron | 45.0% | |
TGCATTGTTCCCACGAGTAA+GGG | - | chr5_4:17762192-17762211 | Msa0841460:intron | 45.0% | |
CAATTGTGAACCCTTACTCG+TGG | + | chr5_4:17762205-17762224 | None:intergenic | 45.0% | |
CACGAGTAAGGGTTCACAAT+TGG | - | chr5_4:17762203-17762222 | Msa0841460:intron | 45.0% | |
CTCCACAGTCCAAAATCCAA+GGG | - | chr5_4:17762294-17762313 | Msa0841460:intron | 45.0% | |
! | AACTGTTGGCCCTTGGATTT+TGG | + | chr5_4:17762306-17762325 | None:intergenic | 45.0% |
AATCATCAACTGTTGGCCCT+TGG | + | chr5_4:17762313-17762332 | None:intergenic | 45.0% | |
ATCTTCACGAAGTCTCTTCG+AGG | - | chr5_4:17762344-17762363 | Msa0841460:intron | 45.0% | |
GATTTGTATGCTCCAGCTTG+AGG | - | chr5_4:17762407-17762426 | Msa0841460:intron | 45.0% | |
TTTGTATGCTCCAGCTTGAG+GGG | - | chr5_4:17762409-17762428 | Msa0841460:intron | 45.0% | |
TCTTGACGAAATGGGTGGAA+TGG | + | chr5_4:17762895-17762914 | None:intergenic | 45.0% | |
!!! | GCGCTGCCCTTTTTTTTTCT+TGG | + | chr5_4:17762952-17762971 | None:intergenic | 45.0% |
AAGTGATACTGGGCTCAACA+GGG | + | chr5_4:17763005-17763024 | None:intergenic | 45.0% | |
TAAGTGATACTGGGCTCAAC+AGG | + | chr5_4:17763006-17763025 | None:intergenic | 45.0% | |
!!! | GGTATTTTGGTCAGTTTGGC+TGG | + | chr5_4:17763073-17763092 | None:intergenic | 45.0% |
!!! | CAGGGGTATTTTGGTCAGTT+TGG | + | chr5_4:17763077-17763096 | None:intergenic | 45.0% |
! | GCGTTACTTAAGTTGCACAG+GGG | - | chr5_4:17763375-17763394 | Msa0841460:intron | 45.0% |
TGAAATGCGAGCATATGGGT+TGG | + | chr5_4:17763499-17763518 | None:intergenic | 45.0% | |
CCTCGCAATACAATCTGGTT+TGG | + | chr5_4:17763590-17763609 | None:intergenic | 45.0% | |
CCAAACCAGATTGTATTGCG+AGG | - | chr5_4:17763587-17763606 | Msa0841460:intron | 45.0% | |
TGGACTACAGCTTCTTTCCT+TGG | - | chr5_4:17764620-17764639 | Msa0841460:intron | 45.0% | |
TACAGCTTCTTTCCTTGGAG+AGG | - | chr5_4:17764625-17764644 | Msa0841460:intron | 45.0% | |
ACAGCTTCTTTCCTTGGAGA+GGG | - | chr5_4:17764626-17764645 | Msa0841460:intron | 45.0% | |
GTCTACCAACATAGGTAGCT+TGG | - | chr5_4:17765014-17765033 | Msa0841460:intron | 45.0% | |
CTACCAACATAGGTAGCTTG+GGG | - | chr5_4:17765016-17765035 | Msa0841460:intron | 45.0% | |
TATCCCCAAGCTACCTATGT+TGG | + | chr5_4:17765022-17765041 | Msa0841470:five_prime_UTR | 45.0% | |
GGATACTGTTGTTGCAACTG+CGG | - | chr5_4:17765037-17765056 | Msa0841460:intron | 45.0% | |
!! | CATAGGTACTGGGAATCAGA+TGG | + | chr5_4:17765168-17765187 | Msa0841470:intron | 45.0% |
CAGATACTTTGCAATGGACC+TGG | + | chr5_4:17765325-17765344 | Msa0841470:intron | 45.0% | |
TTGCAATGGTGCATGCACTA+TGG | + | chr5_4:17765466-17765485 | Msa0841470:intron | 45.0% | |
TTTCGTGTGCTTGTCAACAC+TGG | + | chr5_4:17765622-17765641 | Msa0841470:intron | 45.0% | |
!! | CAAAGTCGGTGTTTTCGGTA+TGG | + | chr5_4:17766144-17766163 | Msa0841470:intron | 45.0% |
AATGCTCCCTGATTCCATGT+AGG | + | chr5_4:17766283-17766302 | Msa0841470:intron | 45.0% | |
TCACATCCAAACAGGACTTC+AGG | - | chr5_4:17766384-17766403 | Msa0841460:intron | 45.0% | |
ATAGTGCCTGAAGTCCTGTT+TGG | + | chr5_4:17766393-17766412 | Msa0841470:intron | 45.0% | |
TATTGCGACATATGTGCGAC+AGG | + | chr5_4:17766498-17766517 | Msa0841470:intron | 45.0% | |
GCAATAAAGTTGCACCAACC+AGG | - | chr5_4:17766512-17766531 | Msa0841460:intron | 45.0% | |
TGCATAGTTGGTTACCTGGT+TGG | + | chr5_4:17766529-17766548 | Msa0841470:intron | 45.0% | |
TGTTTATAGAGTGTGGGGGT+GGG | + | chr5_4:17766567-17766586 | Msa0841470:intron | 45.0% | |
TTGTTTATAGAGTGTGGGGG+TGG | + | chr5_4:17766568-17766587 | Msa0841470:intron | 45.0% | |
GCAGCAGCAATGTAGAATCT+CGG | - | chr5_4:17766731-17766750 | Msa0841460:intron | 45.0% | |
TCTCTGATGGAAAGAGGCAA+TGG | + | chr5_4:17767067-17767086 | Msa0841470:intron | 45.0% | |
CCACCAACTTCCTCATTTCT+TGG | + | chr5_4:17767721-17767740 | Msa0841470:CDS | 45.0% | |
CCAAGAAATGAGGAAGTTGG+TGG | - | chr5_4:17767718-17767737 | Msa0841460:intron | 45.0% | |
TAAGATAAGGTGGGGAGTTC+AGG | - | chr5_4:17768418-17768437 | Msa0841460:intron | 45.0% | |
CTCAGATCACCTCTCTTTAG+TGG | + | chr5_4:17768669-17768688 | None:intergenic | 45.0% | |
!! | CTCTGGAACACTCATTTCTC+TGG | + | chr5_4:17768939-17768958 | None:intergenic | 45.0% |
ACGGCGGAAACTTGAAATTG+AGG | - | chr5_4:17769483-17769502 | Msa0841460:intron | 45.0% | |
GCGGAAACTTGAAATTGAGG+AGG | - | chr5_4:17769486-17769505 | Msa0841460:intron | 45.0% | |
! | AACGTAGCGGAGTTTCGATT+TGG | + | chr5_4:17769584-17769603 | None:intergenic | 45.0% |
GTTGACATCAACAACCTCAG+GGG | + | chr5_4:17769665-17769684 | None:intergenic | 45.0% | |
CTGTTGACATCAACAACCTC+AGG | + | chr5_4:17769667-17769686 | None:intergenic | 45.0% | |
!! | TTCCTTGGTCTTGCTTGAAC+TGG | + | chr5_4:17769728-17769747 | None:intergenic | 45.0% |
AACCTAACTGCTCTGTTCTC+AGG | + | chr5_4:17770338-17770357 | None:intergenic | 45.0% | |
AGTCATTACCATGAGCGCAA+TGG | + | chr5_4:17770594-17770613 | None:intergenic | 45.0% | |
GCAGACCTTTCCATGTATCA+AGG | + | chr5_4:17759501-17759520 | None:intergenic | 45.0% | |
!! | GAAAGGTCTGCGTTGTTTTC+AGG | - | chr5_4:17759510-17759529 | Msa0841460:CDS | 45.0% |
! | TGGTGACTCGGATATGACTT+AGG | + | chr5_4:17770985-17771004 | None:intergenic | 45.0% |
!! | AATATAGGCGGTTGGTGACT+CGG | + | chr5_4:17759809-17759828 | None:intergenic | 45.0% |
GGCAGGAAGTGATTTACAGT+TGG | - | chr5_4:17759912-17759931 | Msa0841460:intron | 45.0% | |
AAAACACTTTCTTGGCGACG+AGG | - | chr5_4:17771667-17771686 | Msa0841460:intron | 45.0% | |
CGACGAGGAATACAAACGTT+GGG | - | chr5_4:17771682-17771701 | Msa0841460:intron | 45.0% | |
! | TACAGGGTGTTTCACATCTC+GGG | + | chr5_4:17771760-17771779 | None:intergenic | 45.0% |
TGAAACACCCTGTATAGAGG+AGG | - | chr5_4:17771766-17771785 | Msa0841460:intron | 45.0% | |
TGGTCTTCCTCCTCTATACA+GGG | + | chr5_4:17760568-17760587 | None:intergenic | 45.0% | |
! | TTGGTCTTCCTCCTCTATAC+AGG | + | chr5_4:17760569-17760588 | None:intergenic | 45.0% |
!!! | ATTTTGGGCACTGAGCATGT+TGG | + | chr5_4:17760588-17760607 | None:intergenic | 45.0% |
TCATGCATGCAATGCCAACA+TGG | + | chr5_4:17760648-17760667 | None:intergenic | 45.0% | |
AAGCAGCTCCTATGGATTTC+TGG | + | chr5_4:17771923-17771942 | None:intergenic | 45.0% | |
! | TGTCCGCTACTCCAGTTTTT+AGG | - | chr5_4:17760912-17760931 | Msa0841460:CDS | 45.0% |
! | GTCCGCTACTCCAGTTTTTA+GGG | - | chr5_4:17772121-17772140 | Msa0841460:CDS | 45.0% |
!! | TCCGCTACTCCAGTTTTTAG+GGG | - | chr5_4:17772122-17772141 | Msa0841460:CDS | 45.0% |
!! | TAGCGGATTGCGGAAAATTG+AGG | + | chr5_4:17772430-17772449 | None:intergenic | 45.0% |
!! | GTGTTATCAGTAGCGGATTG+CGG | + | chr5_4:17761273-17761292 | None:intergenic | 45.0% |
!! | AAGAGCGGTGTTATCAGTAG+CGG | + | chr5_4:17761280-17761299 | None:intergenic | 45.0% |
TGATCCACTAGTTGTACCTG+TGG | - | chr5_4:17772781-17772800 | Msa0841460:CDS | 45.0% | |
GATCCACTAGTTGTACCTGT+GGG | - | chr5_4:17772782-17772801 | Msa0841460:CDS | 45.0% | |
AATCCCACAGGTACAACTAG+TGG | + | chr5_4:17772788-17772807 | None:intergenic | 45.0% | |
ACATGTCTCTGTGGACATCA+TGG | + | chr5_4:17761764-17761783 | None:intergenic | 45.0% | |
CTGGATTTCGTCCTTGTCAT+AGG | - | chr5_4:17761839-17761858 | Msa0841460:CDS | 45.0% | |
! | TCCAAGTTGTGCCCTTTTTG+TGG | - | chr5_4:17773061-17773080 | Msa0841460:CDS | 45.0% |
! | ACCACAAAAAGGGCACAACT+TGG | + | chr5_4:17773065-17773084 | None:intergenic | 45.0% |
! | GTTGTGCCCTTTTTGTGGTA+TGG | - | chr5_4:17773066-17773085 | Msa0841460:CDS | 45.0% |
! | AGTCAAGTGCTTTGTTGCAG+AGG | + | chr5_4:17773156-17773175 | None:intergenic | 45.0% |
!! | ATTTGTTGTACTTCCTGGCG+AGG | + | chr5_4:17773339-17773358 | None:intergenic | 45.0% |
ATGTGGAACGTTGAGACTTG+TGG | - | chr5_4:17773543-17773562 | Msa0841460:intron | 45.0% | |
! | GAATCAGTAATGAAGCGTCC+AGG | + | chr5_4:17774176-17774195 | None:intergenic | 45.0% |
TCTGTTCACCCAACAACAGT+GGG | + | chr5_4:17774392-17774411 | None:intergenic | 45.0% | |
!! | AAATAATGATAATATAAATA+AGG | + | chr5_4:17762485-17762504 | None:intergenic | 5.0% |
!! | AAAATTATGTTAAATATATT+AGG | - | chr5_4:17767861-17767880 | Msa0841460:intron | 5.0% |
!!! | ATTATTCATTTTTTTAAATA+AGG | + | chr5_4:17768545-17768564 | None:intergenic | 5.0% |
!! | AGTTATTAAATAAAAAAAAT+TGG | + | chr5_4:17771481-17771500 | None:intergenic | 5.0% |
TGTTCAACCGCCACAGAGTT+AGG | + | chr5_4:17758446-17758465 | None:intergenic | 50.0% | |
!! | CAACAACACCGTTGATGACG+TGG | - | chr5_4:17758496-17758515 | Msa0841460:intron | 50.0% |
TGAACTGGCCACGTCATCAA+CGG | + | chr5_4:17758507-17758526 | None:intergenic | 50.0% | |
GTGTCAGTGTTAGTCCTGCT+TGG | + | chr5_4:17758929-17758948 | None:intergenic | 50.0% | |
AACCTAACTGCTCTGCTCTC+AGG | + | chr5_4:17759151-17759170 | None:intergenic | 50.0% | |
GAGCAGAGTGGTATGGTACA+TGG | + | chr5_4:17759243-17759262 | None:intergenic | 50.0% | |
AGTCATCACCACGAGTGCAA+TGG | + | chr5_4:17759405-17759424 | None:intergenic | 50.0% | |
ATGGACAGAACAACAAGGGC+AGG | - | chr5_4:17759895-17759914 | Msa0841460:intron | 50.0% | |
GCAACGAAGAATACGACCGT+TGG | - | chr5_4:17760473-17760492 | Msa0841460:intron | 50.0% | |
! | TACAGGGCGTTTCACATCTC+GGG | + | chr5_4:17760552-17760571 | None:intergenic | 50.0% |
TGAAACGCCCTGTATAGAGG+AGG | - | chr5_4:17760558-17760577 | Msa0841460:intron | 50.0% | |
TGCATGCAATGCCAACATGG+CGG | + | chr5_4:17760645-17760664 | None:intergenic | 50.0% | |
AGCAAAACTAGGTAGTGCCG+CGG | + | chr5_4:17760879-17760898 | None:intergenic | 50.0% | |
TTAATAGCGAAGCCGCATGG+CGG | + | chr5_4:17761196-17761215 | None:intergenic | 50.0% | |
GAGTTAATAGCGAAGCCGCA+TGG | + | chr5_4:17761199-17761218 | None:intergenic | 50.0% | |
ACTCGTGGGAACAATGCACA+TGG | + | chr5_4:17762190-17762209 | None:intergenic | 50.0% | |
GTGCATTGTTCCCACGAGTA+AGG | - | chr5_4:17762191-17762210 | Msa0841460:intron | 50.0% | |
GCACGAATAAATCCTCGCCT+TGG | - | chr5_4:17762229-17762248 | Msa0841460:intron | 50.0% | |
CTGTGGAGCTTCTGATCATG+TGG | + | chr5_4:17762282-17762301 | None:intergenic | 50.0% | |
GCTCCACAGTCCAAAATCCA+AGG | - | chr5_4:17762293-17762312 | Msa0841460:intron | 50.0% | |
TTGTATGCTCCAGCTTGAGG+GGG | - | chr5_4:17762410-17762429 | Msa0841460:intron | 50.0% | |
TTGGGTCGTTATCGGTCACA+AGG | - | chr5_4:17762622-17762641 | Msa0841460:intron | 50.0% | |
ATCTTCTGTCATCTGCAGGG+TGG | - | chr5_4:17762698-17762717 | Msa0841460:intron | 50.0% | |
CAGGGGAAGAGCAGTAATCT+TGG | + | chr5_4:17763034-17763053 | None:intergenic | 50.0% | |
GCATCCCTCGCAATACAATC+TGG | + | chr5_4:17763595-17763614 | None:intergenic | 50.0% | |
AGCAAACGGTGAAGCACACA+TGG | + | chr5_4:17764172-17764191 | None:intergenic | 50.0% | |
!! | GCGAGGACCGATTTTGCTAA+CGG | - | chr5_4:17764211-17764230 | Msa0841460:intron | 50.0% |
GAAGAGGAGGAAGGAAAGGT+TGG | + | chr5_4:17764454-17764473 | None:intergenic | 50.0% | |
ACCTTTCCTTCCTCCTCTTC+TGG | - | chr5_4:17764454-17764473 | Msa0841460:intron | 50.0% | |
CCTTTCCTTCCTCCTCTTCT+GGG | - | chr5_4:17764455-17764474 | Msa0841460:intron | 50.0% | |
TAGTCAGACATGCCCAGAAG+AGG | + | chr5_4:17764470-17764489 | None:intergenic | 50.0% | |
CACTGGAATCAGTGCGATCA+TGG | - | chr5_4:17764594-17764613 | Msa0841460:intron | 50.0% | |
CAGCTTCTTTCCTTGGAGAG+GGG | - | chr5_4:17764627-17764646 | Msa0841460:intron | 50.0% | |
TTCTTTCCTTGGAGAGGGGT+AGG | - | chr5_4:17764631-17764650 | Msa0841460:intron | 50.0% | |
TCTTTCCTTGGAGAGGGGTA+GGG | - | chr5_4:17764632-17764651 | Msa0841460:intron | 50.0% | |
CAGCCATCCACAGCTTGTAT+AGG | - | chr5_4:17765080-17765099 | Msa0841460:intron | 50.0% | |
GCTCCTATACAAGCTGTGGA+TGG | + | chr5_4:17765086-17765105 | Msa0841470:intron | 50.0% | |
GCTTGCTCCTATACAAGCTG+TGG | + | chr5_4:17765090-17765109 | Msa0841470:intron | 50.0% | |
GTGAGAAGGCTCTCATTGAG+TGG | + | chr5_4:17765112-17765131 | Msa0841470:intron | 50.0% | |
CAAAGGGGAATGCAAGTTCC+AGG | - | chr5_4:17765304-17765323 | Msa0841460:intron | 50.0% | |
AGACATGGTGGTACCACTTC+AGG | - | chr5_4:17765422-17765441 | Msa0841460:intron | 50.0% | |
TTTATAGAGTGTGGGGGTGG+GGG | + | chr5_4:17766565-17766584 | Msa0841470:intron | 50.0% | |
GTTTATAGAGTGTGGGGGTG+GGG | + | chr5_4:17766566-17766585 | Msa0841470:intron | 50.0% | |
! | GGAAAACTCTCTGGCTTCTG+AGG | + | chr5_4:17766675-17766694 | Msa0841470:intron | 50.0% |
GGAAGGCCCTTGAGAAAAAG+AGG | + | chr5_4:17766938-17766957 | Msa0841470:intron | 50.0% | |
TTGCAAGGTGGCATGTGTCT+TGG | - | chr5_4:17767296-17767315 | Msa0841460:intron | 50.0% | |
TGCAAGGTGGCATGTGTCTT+GGG | - | chr5_4:17767297-17767316 | Msa0841460:intron | 50.0% | |
! | CAGTTTTCGGTCAGCCTAGA+CGG | - | chr5_4:17767777-17767796 | Msa0841460:intron | 50.0% |
! | TATTTTTCGTCCCGCCGTCT+AGG | + | chr5_4:17767794-17767813 | Msa0841470:exon | 50.0% |
TCGTCATCTTAGTGCGACGT+TGG | - | chr5_4:17768784-17768803 | Msa0841460:intron | 50.0% | |
TTCTTCACCTAACTCTGCGG+CGG | - | chr5_4:17769624-17769643 | Msa0841460:intron | 50.0% | |
TGAAGAACCAGTTTCCCCTG+AGG | - | chr5_4:17769648-17769667 | Msa0841460:intron | 50.0% | |
TCAACAACCTCAGGGGAAAC+TGG | + | chr5_4:17769658-17769677 | None:intergenic | 50.0% | |
!! | GAACAACACCGTTGATGACG+TGG | - | chr5_4:17769702-17769721 | Msa0841460:intron | 50.0% |
TGAACTGGCCACGTCATCAA+CGG | + | chr5_4:17758507-17758526 | None:intergenic | 50.0% | |
GTGTCAGTGTTAGTCCTGCT+TGG | + | chr5_4:17758929-17758948 | None:intergenic | 50.0% | |
GTCCTGAGAACAGAGCAGTT+AGG | - | chr5_4:17770333-17770352 | Msa0841460:intron | 50.0% | |
GAGCAGAGTGGTATGGTACA+TGG | + | chr5_4:17759243-17759262 | None:intergenic | 50.0% | |
ATGGACAGAACAACAAGGGC+AGG | - | chr5_4:17759895-17759914 | Msa0841460:intron | 50.0% | |
!! | CAACAGGTACCGAATTCGTC+CGG | - | chr5_4:17760305-17760324 | Msa0841460:intron | 50.0% |
GCATGGTAACCGGACGAATT+CGG | + | chr5_4:17771525-17771544 | None:intergenic | 50.0% | |
TGCAAGGAGATGATTCCACC+AGG | - | chr5_4:17771638-17771657 | Msa0841460:intron | 50.0% | |
GCGACGAGGAATACAAACGT+TGG | - | chr5_4:17771681-17771700 | Msa0841460:intron | 50.0% | |
TGCATGCAATGCCAACATGG+CGG | + | chr5_4:17760645-17760664 | None:intergenic | 50.0% | |
GCGCCACTATTTGACATCAC+TGG | + | chr5_4:17772027-17772046 | None:intergenic | 50.0% | |
GCCCCTAAAAACTGGAGTAG+CGG | + | chr5_4:17772126-17772145 | None:intergenic | 50.0% | |
GACTTATTTCAACCGCCACG+TGG | - | chr5_4:17772349-17772368 | Msa0841460:CDS | 50.0% | |
GGTATGGCGATTTCTCGAAC+TGG | - | chr5_4:17773082-17773101 | Msa0841460:CDS | 50.0% | |
ATGGCGATTTCTCGAACTGG+AGG | - | chr5_4:17773085-17773104 | Msa0841460:CDS | 50.0% | |
AGCACGAATAAATCCTCGCC+AGG | - | chr5_4:17762228-17762247 | Msa0841460:intron | 50.0% | |
GCTGAACTCTTTCACCTTCG+TGG | - | chr5_4:17773363-17773382 | Msa0841460:intron | 50.0% | |
CTCTGTTCACCCAACAACAG+TGG | + | chr5_4:17774393-17774412 | None:intergenic | 50.0% | |
CACTGTTGTTGGGTGAACAG+AGG | - | chr5_4:17774391-17774410 | Msa0841460:CDS | 50.0% | |
GGCCAGTTCAAGCAACTCCA+AGG | - | chr5_4:17758517-17758536 | Msa0841460:intron | 55.0% | |
GTCCTGAGAGCAGAGCAGTT+AGG | - | chr5_4:17759146-17759165 | Msa0841460:intron | 55.0% | |
CGCGGATGCACGTGTGATTT+CGG | - | chr5_4:17760018-17760037 | Msa0841460:intron | 55.0% | |
GCGGATGCACGTGTGATTTC+GGG | - | chr5_4:17760019-17760038 | Msa0841460:intron | 55.0% | |
CGGACGAATTCGGTACCTGT+TGG | + | chr5_4:17760307-17760326 | None:intergenic | 55.0% | |
TGCAAGGAGATGATTCCGCC+AGG | - | chr5_4:17760430-17760449 | Msa0841460:intron | 55.0% | |
!! | AGGTAGTGCCGCGGTTTTGA+TGG | + | chr5_4:17760870-17760889 | None:intergenic | 55.0% |
GGAGCTTCTGATCATGTGGC+TGG | + | chr5_4:17762278-17762297 | None:intergenic | 55.0% | |
! | GGCCCTTGGATTTTGGACTG+TGG | + | chr5_4:17762299-17762318 | None:intergenic | 55.0% |
CGAAGTCTCTTCGAGGACCA+AGG | - | chr5_4:17762351-17762370 | Msa0841460:intron | 55.0% | |
CTTGCATTGTCGGGCATGAG+TGG | + | chr5_4:17762819-17762838 | None:intergenic | 55.0% | |
! | GGTGTGAGCGAAAAGTGCAG+GGG | + | chr5_4:17763051-17763070 | None:intergenic | 55.0% |
! | GGGTGTGAGCGAAAAGTGCA+GGG | + | chr5_4:17763052-17763071 | None:intergenic | 55.0% |
! | TGGGTGTGAGCGAAAAGTGC+AGG | + | chr5_4:17763053-17763072 | None:intergenic | 55.0% |
!! | TGCACAGGGGTATTTGGGCA+TGG | - | chr5_4:17763388-17763407 | Msa0841460:intron | 55.0% |
GGTATTTGGGCATGGCTGCA+GGG | - | chr5_4:17763396-17763415 | Msa0841460:intron | 55.0% | |
! | AGGGCGCGAGTGTTTTGTGA+TGG | - | chr5_4:17763415-17763434 | Msa0841460:intron | 55.0% |
! | GGGCGCGAGTGTTTTGTGAT+GGG | - | chr5_4:17763416-17763435 | Msa0841460:intron | 55.0% |
! | GGCGCGAGTGTTTTGTGATG+GGG | - | chr5_4:17763417-17763436 | Msa0841460:intron | 55.0% |
! | GCGCGAGTGTTTTGTGATGG+GGG | - | chr5_4:17763418-17763437 | Msa0841460:intron | 55.0% |
CCCAGAAGAGGAGGAAGGAA+AGG | + | chr5_4:17764458-17764477 | None:intergenic | 55.0% | |
ACATGCCCAGAAGAGGAGGA+AGG | + | chr5_4:17764463-17764482 | None:intergenic | 55.0% | |
TCAGACATGCCCAGAAGAGG+AGG | + | chr5_4:17764467-17764486 | None:intergenic | 55.0% | |
ACAGCGGGGAAGGAAAGCAA+GGG | + | chr5_4:17764504-17764523 | None:intergenic | 55.0% | |
CTTTCCTTGGAGAGGGGTAG+GGG | - | chr5_4:17764633-17764652 | Msa0841460:intron | 55.0% | |
TTTACCCCTACCCCTCTCCA+AGG | + | chr5_4:17764640-17764659 | None:intergenic | 55.0% | |
GAGAGGGGTAGGGGTAAACA+TGG | - | chr5_4:17764642-17764661 | Msa0841460:intron | 55.0% | |
CCACTTGCAGACTGGGAGAT+TGG | + | chr5_4:17766046-17766065 | Msa0841470:CDS | 55.0% | |
CCAATCTCCCAGTCTGCAAG+TGG | - | chr5_4:17766043-17766062 | Msa0841460:intron | 55.0% | |
GCAAGGTGGCATGTGTCTTG+GGG | - | chr5_4:17767298-17767317 | Msa0841460:intron | 55.0% | |
CTAGGCTGACCGAAAACTGG+TGG | + | chr5_4:17767776-17767795 | Msa0841470:CDS | 55.0% | |
CGTCTAGGCTGACCGAAAAC+TGG | + | chr5_4:17767779-17767798 | Msa0841470:CDS | 55.0% | |
! | TTTTCGGTCAGCCTAGACGG+CGG | - | chr5_4:17767780-17767799 | Msa0841460:intron | 55.0% |
TCTTCAACCGCCGCAGAGTT+AGG | + | chr5_4:17769634-17769653 | None:intergenic | 55.0% | |
GGCCAGTTCAAGCAAGACCA+AGG | - | chr5_4:17769723-17769742 | Msa0841460:intron | 55.0% | |
CTGCTCTGTTCTCAGGACAC+CGG | + | chr5_4:17770331-17770350 | None:intergenic | 55.0% | |
CGGACGAATTCGGTACCTGT+TGG | + | chr5_4:17760307-17760326 | None:intergenic | 55.0% | |
TGAATAGCGAAGCCACGTGG+CGG | + | chr5_4:17772364-17772383 | None:intergenic | 55.0% | |
TAGGACAAGCTGAGCCACGA+AGG | + | chr5_4:17773380-17773399 | None:intergenic | 55.0% | |
AATGCACGAGCGTGCCTTTC+TGG | + | chr5_4:17773926-17773945 | None:intergenic | 55.0% | |
TGCTCTGCTCTCAGGACACC+GGG | + | chr5_4:17759143-17759162 | None:intergenic | 60.0% | |
CTGCTCTGCTCTCAGGACAC+CGG | + | chr5_4:17759144-17759163 | None:intergenic | 60.0% | |
CGCAGTGGAGCAGAGTGGTA+TGG | + | chr5_4:17759250-17759269 | None:intergenic | 60.0% | |
TAGAGCGCAGTGGAGCAGAG+TGG | + | chr5_4:17759255-17759274 | None:intergenic | 60.0% | |
ATGGCGGCGTTCCCTGCAAA+GGG | + | chr5_4:17760629-17760648 | None:intergenic | 60.0% | |
CTCAACACTCCCCCTCAAGC+TGG | + | chr5_4:17762422-17762441 | None:intergenic | 60.0% | |
GGGTATTTGGGCATGGCTGC+AGG | - | chr5_4:17763395-17763414 | Msa0841460:intron | 60.0% | |
GACAGCGGGGAAGGAAAGCA+AGG | + | chr5_4:17764505-17764524 | None:intergenic | 60.0% | |
TTTGCCCGGCGAAGTGACAG+CGG | + | chr5_4:17764520-17764539 | None:intergenic | 60.0% | |
! | GGCAATGGCTGCTGCTTCTC+TGG | + | chr5_4:17767052-17767071 | Msa0841470:intron | 60.0% |
TTTCGGTCAGCCTAGACGGC+GGG | - | chr5_4:17767781-17767800 | Msa0841460:intron | 60.0% | |
CGCAGTGGAGCAGAGTGGTA+TGG | + | chr5_4:17759250-17759269 | None:intergenic | 60.0% | |
TAGAGCGCAGTGGAGCAGAG+TGG | + | chr5_4:17759255-17759274 | None:intergenic | 60.0% | |
TGTGGACGCACGCGTGGTTT+CGG | - | chr5_4:17771206-17771225 | Msa0841460:intron | 60.0% | |
GCACGCGTGGTTTCGGGAAT+TGG | - | chr5_4:17771213-17771232 | Msa0841460:intron | 60.0% | |
GGGTGAATAGCGAAGCCACG+TGG | + | chr5_4:17772367-17772386 | None:intergenic | 60.0% | |
GCTCTGCTCTCAGGACACCG+GGG | + | chr5_4:17759142-17759161 | None:intergenic | 65.0% | |
GGACAGACGCTAGAGCGCAG+TGG | + | chr5_4:17759265-17759284 | None:intergenic | 65.0% | |
CATGGCGGCGTTCCCTGCAA+AGG | + | chr5_4:17760630-17760649 | None:intergenic | 65.0% | |
TGCAGGGAACGCCGCCATGT+TGG | - | chr5_4:17760631-17760650 | Msa0841460:intron | 65.0% | |
! | CTTCCCCGCTGTCACTTCGC+CGG | - | chr5_4:17764512-17764531 | Msa0841460:intron | 65.0% |
! | TTCCCCGCTGTCACTTCGCC+GGG | - | chr5_4:17764513-17764532 | Msa0841460:intron | 65.0% |
TTGCCCGGCGAAGTGACAGC+GGG | + | chr5_4:17764519-17764538 | None:intergenic | 65.0% | |
GGACAGACGCTAGAGCGCAG+TGG | + | chr5_4:17759265-17759284 | None:intergenic | 65.0% | |
TCGTGTTGTGGACGCACGCG+TGG | - | chr5_4:17771200-17771219 | Msa0841460:intron | 65.0% | |
GTGGACGCACGCGTGGTTTC+GGG | - | chr5_4:17771207-17771226 | Msa0841460:intron | 65.0% | |
CGGCGAAGTGACAGCGGGGA+AGG | + | chr5_4:17764514-17764533 | None:intergenic | 70.0% | |
TGCCCGGCGAAGTGACAGCG+GGG | + | chr5_4:17764518-17764537 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 17758347 | 17774464 | 17758347 | ID=Msa0841460;Name=Msa0841460 |
chr5_4 | mRNA | 17758347 | 17774464 | 17758347 | ID=Msa0841460-mRNA-1;Parent=Msa0841460;Name=Msa0841460-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.52|0.22|0.94|0.70|0.55|18|0|970 |
chr5_4 | exon | 17774262 | 17774464 | 17774262 | ID=Msa0841460-mRNA-1:exon:7552;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17774144 | 17774228 | 17774144 | ID=Msa0841460-mRNA-1:exon:7551;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17773280 | 17773354 | 17773280 | ID=Msa0841460-mRNA-1:exon:7550;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17772942 | 17773170 | 17772942 | ID=Msa0841460-mRNA-1:exon:7549;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17772654 | 17772815 | 17772654 | ID=Msa0841460-mRNA-1:exon:7548;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17772281 | 17772500 | 17772281 | ID=Msa0841460-mRNA-1:exon:7547;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17772115 | 17772256 | 17772115 | ID=Msa0841460-mRNA-1:exon:7546;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17770715 | 17770950 | 17770715 | ID=Msa0841460-mRNA-1:exon:7545;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17763154 | 17763265 | 17763154 | ID=Msa0841460-mRNA-1:exon:7544;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17762926 | 17763141 | 17762926 | ID=Msa0841460-mRNA-1:exon:7543;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17762091 | 17762165 | 17762091 | ID=Msa0841460-mRNA-1:exon:7542;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17761754 | 17761979 | 17761754 | ID=Msa0841460-mRNA-1:exon:7541;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17761466 | 17761684 | 17761466 | ID=Msa0841460-mRNA-1:exon:7540;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17761073 | 17761292 | 17761073 | ID=Msa0841460-mRNA-1:exon:7539;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17760907 | 17760967 | 17760907 | ID=Msa0841460-mRNA-1:exon:7538;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17759611 | 17759846 | 17759611 | ID=Msa0841460-mRNA-1:exon:7537;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17759389 | 17759530 | 17759389 | ID=Msa0841460-mRNA-1:exon:7536;Parent=Msa0841460-mRNA-1 |
chr5_4 | exon | 17758347 | 17758400 | 17758347 | ID=Msa0841460-mRNA-1:exon:7535;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17774262 | 17774464 | 17774262 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17774144 | 17774228 | 17774144 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17773280 | 17773354 | 17773280 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17772942 | 17773170 | 17772942 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17772654 | 17772815 | 17772654 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17772281 | 17772500 | 17772281 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17772115 | 17772256 | 17772115 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17770715 | 17770950 | 17770715 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17763154 | 17763265 | 17763154 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17762926 | 17763141 | 17762926 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17762091 | 17762165 | 17762091 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17761754 | 17761979 | 17761754 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17761466 | 17761684 | 17761466 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17761073 | 17761292 | 17761073 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17760907 | 17760967 | 17760907 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17759611 | 17759846 | 17759611 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17759389 | 17759530 | 17759389 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
chr5_4 | CDS | 17758347 | 17758400 | 17758347 | ID=Msa0841460-mRNA-1:cds;Parent=Msa0841460-mRNA-1 |
Gene Sequence |
Protein sequence |