AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0843990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0843990 MtrunA17_Chr2g0287651 41.750 697 399 2 29 720 63 757 0.0 586
Msa0843990 MtrunA17_Chr1g0203051 35.522 594 366 7 1 580 31 621 1.39e-126 399
Msa0843990 MtrunA17_Chr5g0448761 34.215 567 356 7 44 595 63 627 4.17e-106 349
Msa0843990 MtrunA17_Chr2g0296781 31.818 660 426 12 45 686 1 654 1.65e-97 325
Msa0843990 MtrunA17_Chr1g0202341 32.870 575 368 8 42 604 52 620 2.38e-94 315
Msa0843990 MtrunA17_Chr2g0324011 30.783 575 380 5 44 606 13 581 4.98e-91 303
Msa0843990 MtrunA17_Chr5g0441581 32.264 561 357 9 44 593 35 583 2.64e-87 296
Msa0843990 MtrunA17_Chr8g0363841 29.057 647 425 12 44 666 20 656 8.22e-85 288
Msa0843990 MtrunA17_Chr6g0477261 31.703 552 351 8 152 687 3 544 2.53e-82 281
Msa0843990 MtrunA17_Chr1g0207551 32.200 559 364 10 44 593 37 589 2.55e-82 285
Msa0843990 MtrunA17_Chr3g0082121 30.200 649 426 9 1 636 1 635 8.92e-82 281
Msa0843990 MtrunA17_Chr1g0198761 28.388 701 448 17 44 706 50 734 1.27e-76 268
Msa0843990 MtrunA17_Chr6g0458391 29.787 564 356 10 44 593 228 765 4.32e-76 266
Msa0843990 MtrunA17_Chr6g0458391 36.522 115 69 3 44 155 94 207 1.14e-13 75.5
Msa0843990 MtrunA17_Chr1g0203721 29.088 581 397 10 44 612 66 643 4.57e-73 260
Msa0843990 MtrunA17_Chr5g0440451 28.927 643 402 18 44 659 46 660 1.02e-72 260
Msa0843990 MtrunA17_Chr1g0196541 28.909 678 417 15 45 686 1 649 1.31e-72 256
Msa0843990 MtrunA17_Chr2g0329031 28.125 576 395 11 28 596 1 564 1.91e-71 253
Msa0843990 MtrunA17_Chr3g0080351 28.180 621 368 14 2 593 52 623 2.02e-70 252
Msa0843990 MtrunA17_Chr3g0118611 30.185 487 320 6 207 686 113 586 2.38e-70 250
Msa0843990 MtrunA17_Chr2g0287061 28.078 666 402 17 9 655 155 762 5.98e-69 247
Msa0843990 MtrunA17_Chr5g0448511 28.723 470 320 5 205 668 5 465 8.27e-69 240
Msa0843990 MtrunA17_Chr2g0291591 28.864 537 358 10 22 542 39 567 8.73e-63 224
Msa0843990 MtrunA17_Chr5g0431001 31.915 423 266 7 44 446 64 484 8.96e-62 219
Msa0843990 MtrunA17_Chr2g0291581 28.319 565 373 12 44 593 74 621 1.90e-61 223
Msa0843990 MtrunA17_Chr2g0276841 27.562 566 379 13 44 590 73 626 1.58e-60 220
Msa0843990 MtrunA17_Chr2g0294841 25.321 778 462 20 9 709 14 749 5.35e-58 214
Msa0843990 MtrunA17_Chr2g0290391 25.524 572 382 10 44 588 54 608 8.94e-51 191
Msa0843990 MtrunA17_Chr1g0164591 31.847 314 200 3 117 425 3 307 1.01e-49 179
Msa0843990 MtrunA17_Chr7g0258861 35.484 279 173 3 44 316 13 290 7.37e-48 173
Msa0843990 MtrunA17_Chr2g0308841 31.250 224 154 0 374 597 8 231 1.70e-36 139
Msa0843990 MtrunA17_Chr7g0238821 36.111 108 63 2 45 148 1 106 6.77e-15 71.6
Msa0843990 MtrunA17_Chr1g0149131 31.776 107 68 1 320 421 4 110 2.96e-14 70.5
Msa0843990 MtrunA17_Chr6g0451441 27.863 262 170 8 12 265 54 304 4.21e-13 73.2
Msa0843990 MtrunA17_Chr8g0340801 33.945 109 70 1 147 255 1 107 6.36e-13 66.2
Msa0843990 MtrunA17_Chr7g0233911 42.308 104 54 3 44 142 37 139 1.54e-12 68.2
Msa0843990 MtrunA17_Chr8g0389811 30.769 117 76 1 34 145 77 193 1.79e-12 67.8
Msa0843990 MtrunA17_Chr2g0329421 35.514 107 67 2 39 143 25 131 2.08e-12 67.8
Msa0843990 MtrunA17_Chr4g0033611 35.000 100 63 2 44 141 79 178 7.80e-12 67.0
Msa0843990 MtrunA17_Chr3g0102191 37.500 96 59 1 947 1042 95 189 1.27e-11 67.0
Msa0843990 MtrunA17_Chr1g0171741 29.600 125 76 2 42 158 134 254 2.48e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0843990 AT4G38180.1 33.770 610 387 9 2 597 32 638 1.79e-108 356
Msa0843990 AT4G15090.1 30.742 566 376 9 44 598 54 614 1.38e-83 289
Msa0843990 AT4G15090.5 30.742 566 376 9 44 598 54 614 1.38e-83 289
Msa0843990 AT4G15090.3 30.742 566 376 9 44 598 54 614 1.38e-83 289
Msa0843990 AT4G15090.2 30.742 566 376 9 44 598 54 614 1.38e-83 289
Msa0843990 AT4G15090.4 30.742 566 376 9 44 598 54 614 1.38e-83 289
Msa0843990 AT2G27110.2 28.643 597 385 11 3 593 18 579 3.24e-74 263
Msa0843990 AT2G27110.1 28.643 597 385 11 3 593 18 579 3.24e-74 263
Msa0843990 AT3G06250.2 28.230 627 393 15 23 641 174 751 8.60e-74 260
Msa0843990 AT3G06250.1 28.230 627 393 15 23 641 174 751 8.60e-74 260
Msa0843990 AT3G06250.3 28.230 627 393 15 23 641 174 751 8.60e-74 260
Msa0843990 AT5G18960.2 28.192 603 387 12 44 641 214 775 6.23e-72 255
Msa0843990 AT5G18960.2 36.434 129 58 5 13 139 25 131 6.99e-11 67.0
Msa0843990 AT5G18960.1 28.192 603 387 12 44 641 214 775 6.23e-72 255
Msa0843990 AT5G18960.1 36.434 129 58 5 13 139 25 131 6.99e-11 67.0
Msa0843990 AT3G22170.2 27.116 579 374 8 42 598 71 623 4.39e-69 248
Msa0843990 AT3G22170.1 27.116 579 374 8 42 598 71 623 4.39e-69 248
Msa0843990 AT1G76320.2 27.469 557 385 8 45 594 1 545 7.61e-67 239
Msa0843990 AT1G76320.3 27.469 557 385 8 45 594 1 545 8.03e-67 238
Msa0843990 AT1G76320.1 27.469 557 385 8 45 594 1 545 8.76e-67 239
Msa0843990 AT1G76320.4 27.469 557 385 8 45 594 1 545 8.76e-67 239
Msa0843990 AT2G27110.3 31.633 392 260 3 207 593 46 434 5.37e-65 234
Msa0843990 AT4G19990.3 26.904 591 364 13 44 608 24 572 9.08e-61 222
Msa0843990 AT4G19990.4 26.904 591 364 13 44 608 24 572 9.08e-61 222
Msa0843990 AT4G19990.6 26.904 591 364 13 44 608 24 572 1.41e-60 222
Msa0843990 AT4G19990.2 26.904 591 364 13 44 608 24 572 1.41e-60 222
Msa0843990 AT4G19990.5 26.904 591 364 13 44 608 24 572 1.52e-60 222
Msa0843990 AT4G19990.7 26.904 591 364 13 44 608 38 586 1.99e-60 221
Msa0843990 AT1G52520.1 27.165 589 400 10 18 593 66 638 2.12e-60 220
Msa0843990 AT1G80010.1 28.082 584 392 15 44 606 98 674 1.07e-59 219
Msa0843990 AT1G10240.2 26.549 565 386 12 44 590 51 604 2.12e-59 217
Msa0843990 AT1G10240.1 26.549 565 386 12 44 590 51 604 2.12e-59 217
Msa0843990 AT4G38170.1 28.721 383 262 4 217 593 22 399 7.82e-59 212
Msa0843990 AT4G19990.1 26.306 555 342 12 79 608 3 515 7.18e-56 207
Msa0843990 AT5G28530.3 24.564 574 393 11 44 592 58 616 2.83e-49 187
Msa0843990 AT5G28530.2 24.564 574 393 11 44 592 58 616 2.83e-49 187
Msa0843990 AT5G28530.1 24.306 576 396 11 44 592 58 620 1.03e-48 185
Msa0843990 AT2G32250.8 27.316 421 284 6 225 631 141 553 3.11e-48 185
Msa0843990 AT2G32250.7 27.316 421 284 6 225 631 141 553 3.38e-48 185
Msa0843990 AT2G32250.2 27.316 421 284 6 225 631 182 594 3.87e-48 185
Msa0843990 AT2G32250.4 27.316 421 284 6 225 631 182 594 3.87e-48 185
Msa0843990 AT2G32250.5 27.316 421 284 6 225 631 182 594 4.19e-48 184
Msa0843990 AT2G32250.6 27.316 421 284 6 225 631 182 594 5.02e-48 185
Msa0843990 AT2G32250.1 27.316 421 284 6 225 631 182 594 5.02e-48 185
Msa0843990 AT2G32250.3 27.316 421 284 6 225 631 182 594 5.02e-48 185
Msa0843990 AT5G28530.5 22.124 565 355 15 44 592 58 553 1.08e-31 132
Msa0843990 AT5G28530.4 21.869 567 358 15 44 592 58 557 2.91e-31 131
Msa0843990 AT3G07500.1 36.842 152 82 6 16 157 3 150 2.29e-15 76.6
Msa0843990 AT4G12850.1 38.462 117 67 3 44 156 14 129 2.54e-12 67.0
Msa0843990 AT4G12850.2 40.196 102 59 2 39 139 9 109 2.89e-12 65.5
Msa0843990 AT3G59470.3 37.963 108 63 3 39 143 68 174 6.32e-12 67.4
Msa0843990 AT3G59470.1 37.963 108 63 3 39 143 68 174 6.32e-12 67.4
Msa0843990 AT4G12850.4 40.196 102 59 2 39 139 9 109 7.70e-12 64.7
Msa0843990 AT3G59470.2 37.963 108 63 3 39 143 80 186 8.68e-12 67.4

Find 189 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTAATAAATGGAGAGTTTC+TGG 0.125465 5_4:-21931305 Msa0843990:CDS
GAAAAGTCTTCCAAGAATTT+TGG 0.130067 5_4:+21930582 None:intergenic
GTCTCATGGCACAAATAATA+TGG 0.181170 5_4:+21929977 None:intergenic
GTAATCATCCTTTGCTGATT+TGG 0.196309 5_4:+21929906 None:intergenic
CATCTTTCCATGTTACATTT+TGG 0.217563 5_4:+21929001 None:intergenic
GCAGACACTGTCCTGCAATT+TGG 0.218987 5_4:+21927959 None:intergenic
GCATGCAATTGTCTCAAATT+TGG 0.227575 5_4:+21927361 None:intergenic
AGTTGTCTGCTCGTGGAAAT+TGG 0.230194 5_4:+21928839 None:intergenic
CGGATTGACTATGAGTGTTT+TGG 0.239812 5_4:-21930915 Msa0843990:CDS
CTTTGCATCGTCTTTGTTCA+TGG 0.267090 5_4:-21930641 Msa0843990:CDS
AAAGTAGATGCAATTTGATT+TGG 0.270824 5_4:+21928901 None:intergenic
CAGACACTGTCCTGCAATTT+GGG 0.276633 5_4:+21927960 None:intergenic
AAAATTGATGCACCTTGATT+TGG 0.276898 5_4:+21928865 None:intergenic
TCACTCAATTGACGGTTCTT+AGG 0.285255 5_4:+21931227 None:intergenic
AAGACCAATCCATCTGTTAT+TGG 0.288862 5_4:-21929691 Msa0843990:CDS
TAAATGTTGATACTAATAAA+TGG 0.290315 5_4:-21931316 Msa0843990:CDS
AACTCGTTATCATGTCCTTT+TGG 0.298312 5_4:-21928042 Msa0843990:CDS
CATTCAAGTTCTGTTGGATA+TGG 0.304475 5_4:-21928808 Msa0843990:CDS
CCTTTGGCCTTGGCTTTGAT+AGG 0.324333 5_4:+21929664 None:intergenic
TTGGCGTCGGTAAAATAATT+AGG 0.326324 5_4:+21928964 None:intergenic
ATACAGGCACAAAGAGTTAA+TGG 0.341245 5_4:-21930289 Msa0843990:CDS
CAAAGACGATGCAAAGAGTT+TGG 0.342995 5_4:+21930648 None:intergenic
GTTGTCTGCTCGTGGAAATT+GGG 0.345810 5_4:+21928840 None:intergenic
ACGAGGGGCACCTTTGGCCT+TGG 0.345904 5_4:+21929654 None:intergenic
TGTGAAGAATCCAAAATTCT+TGG 0.353566 5_4:-21930592 Msa0843990:CDS
TGAAGAAGGAAAAGAGGATA+TGG 0.353695 5_4:-21931609 Msa0843990:CDS
TGGATACTTACAAGAAGATT+AGG 0.354642 5_4:-21931589 Msa0843990:CDS
GATATATTCATCCACAAATA+AGG 0.360211 5_4:+21927387 None:intergenic
TGCTGCGTTGAGTTATTTGC+AGG 0.361206 5_4:-21931030 Msa0843990:CDS
ATCTTCAGCTGCCTTATTTG+TGG 0.362293 5_4:-21927398 Msa0843990:CDS
GAAAGGAGGTCATGAGAGTC+TGG 0.365097 5_4:-21931126 Msa0843990:CDS
ATAGCCTCTTTATAATCATC+TGG 0.369789 5_4:+21929775 None:intergenic
AGACATAAATGGTGAAGATT+TGG 0.373826 5_4:-21931654 Msa0843990:CDS
GCAATTTGATTTGGAAATTG+AGG 0.377041 5_4:+21928910 None:intergenic
CTTCTTACGAGGGGCACCTT+TGG 0.378868 5_4:+21929648 None:intergenic
AAGATCGGAACACTTTGAAT+TGG 0.379246 5_4:+21928934 None:intergenic
GACGTTTAGAAAATTTATTT+TGG 0.380943 5_4:-21930953 Msa0843990:CDS
CCCACAGTTGCCCAAATTGC+AGG 0.386706 5_4:-21927970 Msa0843990:CDS
GCAAACGATGGAGACATAAA+TGG 0.387588 5_4:-21931665 Msa0843990:CDS
ACATCACGTCCAGCTAGTTC+TGG 0.392972 5_4:+21929556 None:intergenic
ACAATTTATCACACAATACA+TGG 0.415400 5_4:-21930491 Msa0843990:CDS
TGTATCATAAACAGCCTAAA+GGG 0.422872 5_4:-21930722 Msa0843990:CDS
AAGTTTAAGATGAATAGATT+TGG 0.423772 5_4:-21930096 Msa0843990:CDS
TCTGATAAAGCCCTTGTTGA+TGG 0.424223 5_4:-21931203 Msa0843990:CDS
CCATCAGTAACTACCCCTTT+AGG 0.431037 5_4:+21930708 None:intergenic
CTGATAGTCTAATTTGCAAA+AGG 0.431391 5_4:-21929933 Msa0843990:CDS
GTATCTAGTTTATCTTGATA+AGG 0.436094 5_4:-21930058 Msa0843990:CDS
TATCAGATTCACTCAATTGA+CGG 0.439464 5_4:+21931219 None:intergenic
CCATCACATTCAAGTTCTGT+TGG 0.440650 5_4:-21928814 Msa0843990:CDS
TGTAGACAGTTTGAACGGAT+TGG 0.441359 5_4:-21930012 Msa0843990:CDS
GAAGGAAAGGCAAGAATAGA+AGG 0.447532 5_4:-21931065 Msa0843990:CDS
AGAAGAAAACATCCAGGAAA+AGG 0.448830 5_4:-21929627 Msa0843990:CDS
CAATGTGGATGCAAGTTGTT+TGG 0.450663 5_4:-21927278 Msa0843990:CDS
TGAGAACACAATCTTTGAAC+CGG 0.453535 5_4:-21927431 Msa0843990:CDS
CAATTTGGGCAACTGTGGGA+TGG 0.454366 5_4:+21927974 None:intergenic
GGCGAATGAGAAAATCAGTT+GGG 0.457305 5_4:-21927257 Msa0843990:CDS
TATTATTTGTGCCATGAGAC+AGG 0.458720 5_4:-21929974 Msa0843990:CDS
CAATAAAAGAATATCAAAAC+AGG 0.462051 5_4:-21929309 Msa0843990:intron
GGATACTTACAAGAAGATTA+GGG 0.465987 5_4:-21931588 Msa0843990:CDS
CAAGAAGATTAGGGAATTGA+CGG 0.467663 5_4:-21931579 Msa0843990:CDS
AGGAACGAAATGAGCATAAC+GGG 0.473396 5_4:+21931247 None:intergenic
ATTTATGTCTCCATCGTTTG+CGG 0.473976 5_4:+21931667 None:intergenic
AATGGTGTGTTTAATGAAGA+AGG 0.477078 5_4:-21931623 Msa0843990:CDS
AAGTTTACCACAACAGAAGA+AGG 0.485511 5_4:-21930975 Msa0843990:CDS
TAAACGTCCTTCTTCTGTTG+TGG 0.486471 5_4:+21930968 None:intergenic
GAAATCTATGCGGATTGTCA+TGG 0.487261 5_4:-21931500 Msa0843990:CDS
GCGTTACCCTGTCGAAACTT+TGG 0.488614 5_4:-21927473 Msa0843990:CDS
TGAGTTTATGCCTTCACACC+TGG 0.488622 5_4:+21930386 None:intergenic
TCTCATGGCACAAATAATAT+GGG 0.492357 5_4:+21929978 None:intergenic
ATAGAGCTGTAAAAGAATAC+AGG 0.492679 5_4:-21930305 Msa0843990:CDS
GGATGATGATATAAGAGGAT+TGG 0.496802 5_4:-21931558 Msa0843990:CDS
TTGACGGATGATGATATAAG+AGG 0.497315 5_4:-21931563 Msa0843990:CDS
CTCAATTTCAAATTTGTCCA+CGG 0.497600 5_4:+21930536 None:intergenic
ATGTATCATAAACAGCCTAA+AGG 0.499586 5_4:-21930723 Msa0843990:CDS
TAAGAACTCAGTTGTTCCTC+AGG 0.501667 5_4:-21927338 Msa0843990:CDS
TATAACTACTTATACAATGA+AGG 0.501991 5_4:-21931083 Msa0843990:CDS
TTTGGAAATTGAGGAAAGAT+CGG 0.506335 5_4:+21928919 None:intergenic
AGTCATGTGCTCCTGTCTCA+TGG 0.506642 5_4:+21929963 None:intergenic
TTGCATTTGATGCAACATAC+AGG 0.506686 5_4:-21930884 Msa0843990:CDS
TCCTGCAATTTGGGCAACTG+TGG 0.507825 5_4:+21927969 None:intergenic
ATCACCAATAACAGATGGAT+TGG 0.508027 5_4:+21929687 None:intergenic
AGGATTGGAATTTGATTCAG+AGG 0.508865 5_4:-21931543 Msa0843990:CDS
GATGTAAACAAAGATGATGA+TGG 0.508994 5_4:-21931458 Msa0843990:CDS
TAGATTGAAAATGAAGGGAT+TGG 0.509056 5_4:-21929218 Msa0843990:CDS
TTGTACTAGATTGAAAATGA+AGG 0.514645 5_4:-21929224 Msa0843990:intron
CAAAACACTCATAGTCAATC+CGG 0.515222 5_4:+21930916 None:intergenic
GCTGAAGATGCTACTTTCAC+CGG 0.516390 5_4:+21927412 None:intergenic
AGTCTGGTTGATTTCATGCA+TGG 0.520881 5_4:-21930333 Msa0843990:CDS
AATTTGAAATTGAGTGGAAG+AGG 0.523012 5_4:-21930527 Msa0843990:CDS
AGATGATTATAAAGAGGCTA+TGG 0.524840 5_4:-21929773 Msa0843990:CDS
AAAAGCCAATCTCATCCAAA+AGG 0.525339 5_4:+21928027 None:intergenic
TGCGGATTGTCATGGGTTTG+TGG 0.527631 5_4:-21931492 Msa0843990:CDS
TTGTCTGCTCGTGGAAATTG+GGG 0.529245 5_4:+21928841 None:intergenic
AGAAACAAAGTACATATTCG+AGG 0.529955 5_4:-21931382 Msa0843990:CDS
ACTTTGAATTGGAACACCGT+TGG 0.530199 5_4:+21928945 None:intergenic
AAATCTATGCGGATTGTCAT+GGG 0.530849 5_4:-21931499 Msa0843990:CDS
GAAGATTTGGCCAACGGTAA+TGG 0.531434 5_4:-21931641 Msa0843990:CDS
GTAAACTTTGAAAAGAACAT+TGG 0.531778 5_4:+21930990 None:intergenic
GGGCAACTGTGGGATGGGTG+AGG 0.532080 5_4:+21927980 None:intergenic
AAATTGTAGTTCCTCCATGA+TGG 0.532984 5_4:+21930817 None:intergenic
ATAGTCTAATTTGCAAAAGG+TGG 0.533689 5_4:-21929930 Msa0843990:CDS
GAAAGGCAAGAATAGAAGGT+GGG 0.534127 5_4:-21931061 Msa0843990:CDS
CAACAGAACTTGAATGTGAT+GGG 0.534436 5_4:+21928815 None:intergenic
CAAAATGTAACATGGAAAGA+TGG 0.535009 5_4:-21929000 Msa0843990:CDS
CCAACAGAACTTGAATGTGA+TGG 0.535015 5_4:+21928814 None:intergenic
ATTTAAATGGCCGCAAACGA+TGG 0.539363 5_4:-21931677 None:intergenic
ATGATAACGAGTTGGCCTAC+TGG 0.539528 5_4:+21928052 None:intergenic
TGCAGAACACTTAGTTCGAA+TGG 0.539821 5_4:+21931355 None:intergenic
TGTACTAGATTGAAAATGAA+GGG 0.540164 5_4:-21929223 Msa0843990:intron
AATTTGGGCAACTGTGGGAT+GGG 0.541935 5_4:+21927975 None:intergenic
GTGGCATAAGAACTACATCC+AGG 0.542673 5_4:-21930404 Msa0843990:CDS
TGGACAAATTTGAAATTGAG+TGG 0.544484 5_4:-21930533 Msa0843990:CDS
GTCCCATCGCTTCAGCCACA+AGG 0.544569 5_4:+21927163 None:intergenic
AATTGGAACACCGTTGGCGT+CGG 0.545878 5_4:+21928951 None:intergenic
ATTAAACACACCATTACCGT+TGG 0.550414 5_4:+21931631 None:intergenic
GTGCGTGAAGGCCATCAACA+AGG 0.552340 5_4:+21931192 None:intergenic
ACACCCAGATGATTATAAAG+AGG 0.558171 5_4:-21929779 Msa0843990:CDS
AATGTCCAGAGTCAAGATCA+AGG 0.560616 5_4:-21929060 Msa0843990:intron
TAGGAACGAAATGAGCATAA+CGG 0.561873 5_4:+21931246 None:intergenic
AAAGGCAAGAATAGAAGGTG+GGG 0.563747 5_4:-21931060 Msa0843990:CDS
CCTGCAATTTGGGCAACTGT+GGG 0.564136 5_4:+21927970 None:intergenic
TGATTATAAAGAGGCTATGG+AGG 0.565059 5_4:-21929770 Msa0843990:CDS
CAAAACTGTCCAGAACTAGC+TGG 0.566062 5_4:-21929565 Msa0843990:CDS
TGTAACTTTGTTGTCAACAC+AGG 0.566833 5_4:+21930240 None:intergenic
GTTTAATGAAGAAGGAAAAG+AGG 0.567512 5_4:-21931615 Msa0843990:CDS
ATAGGATCACCAATAACAGA+TGG 0.568307 5_4:+21929682 None:intergenic
TCTAAATGAAGTCAATGAAG+AGG 0.568616 5_4:-21929533 Msa0843990:CDS
TAGCCTCTTTATAATCATCT+GGG 0.570856 5_4:+21929776 None:intergenic
GTTGATGGCCTTCACGCACA+CGG 0.573850 5_4:-21931188 Msa0843990:CDS
ATTTGAAATTGAGTGGAAGA+GGG 0.577779 5_4:-21930526 Msa0843990:CDS
AACGGGTTGGAGTTAACTCA+TGG 0.579913 5_4:+21931264 None:intergenic
CTACTTATACAATGAAGGAA+AGG 0.581665 5_4:-21931078 Msa0843990:CDS
TCCCATCGCTTCAGCCACAA+GGG 0.582837 5_4:+21927164 None:intergenic
ATGTAAACAAAGATGATGAT+GGG 0.584402 5_4:-21931457 Msa0843990:CDS
GTGATTGTAGACAGTTTGAA+CGG 0.585179 5_4:-21930017 Msa0843990:CDS
TTCTAACACCGTGTGCGTGA+AGG 0.586649 5_4:+21931180 None:intergenic
GACATTCAAGTCTCCCCTTG+TGG 0.586936 5_4:-21927178 Msa0843990:CDS
TGGCGAATGAGAAAATCAGT+TGG 0.587308 5_4:-21927258 Msa0843990:CDS
CAATTTATCACACAATACAT+GGG 0.590150 5_4:-21930490 Msa0843990:CDS
AGTTAACTCATGGTTGTGTG+AGG 0.591294 5_4:+21931274 None:intergenic
CCTAAAGGGGTAGTTACTGA+TGG 0.593663 5_4:-21930708 Msa0843990:CDS
GATTATAAAGAGGCTATGGA+GGG 0.593735 5_4:-21929769 Msa0843990:CDS
GGAAAGGCAAGAATAGAAGG+TGG 0.594681 5_4:-21931062 Msa0843990:CDS
CAGTGTCTCTTACCGACAGA+GGG 0.597896 5_4:-21927495 Msa0843990:CDS
TACTCACAGTTGTATGATGA+GGG 0.598663 5_4:+21928770 None:intergenic
AGAACTACATCCAGGTGTGA+AGG 0.599918 5_4:-21930396 Msa0843990:CDS
TCGATTAGTATGTAATAGAG+AGG 0.600970 5_4:-21931420 Msa0843990:CDS
AATGGTGAAGATTTGGCCAA+CGG 0.602643 5_4:-21931647 Msa0843990:CDS
ATAAAGAGGCGTCGTGAGAG+TGG 0.603066 5_4:-21929724 Msa0843990:CDS
ACGAAATGAGCATAACGGGT+TGG 0.604271 5_4:+21931251 None:intergenic
ACACTCATAGTCAATCCGGC+TGG 0.606173 5_4:+21930920 None:intergenic
ATTTGTGTGAGAAAATAAAG+AGG 0.607012 5_4:-21929738 Msa0843990:CDS
TTTATGCTGGCTCAGAAAGG+AGG 0.607302 5_4:-21931140 Msa0843990:CDS
TTTGGTCGGATTCAACCAGC+CGG 0.607373 5_4:-21930935 Msa0843990:CDS
TGTTGACAACAAAGTTACAC+AGG 0.607980 5_4:-21930236 Msa0843990:CDS
CCTATCAAAGCCAAGGCCAA+AGG 0.609665 5_4:-21929664 Msa0843990:CDS
GCAGTGTCTCTTACCGACAG+AGG 0.610395 5_4:-21927496 Msa0843990:CDS
AAAGGAGGTCATGAGAGTCT+GGG 0.612373 5_4:-21931125 Msa0843990:CDS
TGGAAGACCAAAATGTAACA+TGG 0.612794 5_4:-21929008 Msa0843990:CDS
GTGTTGATAAGAGTTGTGAC+AGG 0.616075 5_4:-21929379 Msa0843990:CDS
TGGTGATCCTATCAAAGCCA+AGG 0.618217 5_4:-21929671 Msa0843990:CDS
AAAAGGACATGATAACGAGT+TGG 0.619240 5_4:+21928044 None:intergenic
GTAAGAAGAAGAAAACATCC+AGG 0.620639 5_4:-21929633 Msa0843990:CDS
GATGGGAAGTTGTCTGCTCG+TGG 0.621816 5_4:+21928832 None:intergenic
GTTAACTCATGGTTGTGTGA+GGG 0.630795 5_4:+21931275 None:intergenic
GACAGGGTAACGCCCTCTGT+CGG 0.631559 5_4:+21927483 None:intergenic
ATACTCACAGTTGTATGATG+AGG 0.634928 5_4:+21928769 None:intergenic
CATATGAGATGAAGACAATG+TGG 0.635222 5_4:-21930458 Msa0843990:CDS
CGATTAGTATGTAATAGAGA+GGG 0.642038 5_4:-21931419 Msa0843990:CDS
GCGAATGAGAAAATCAGTTG+GGG 0.642594 5_4:-21927256 Msa0843990:CDS
GCACAAATAATATGGGAACA+TGG 0.643217 5_4:+21929985 None:intergenic
TGCGTGAAGGCCATCAACAA+GGG 0.643321 5_4:+21931193 None:intergenic
AAGGTGGACCAAATCAGCAA+AGG 0.645642 5_4:-21929914 Msa0843990:CDS
GATTTATGCTAATTATACCG+TGG 0.646515 5_4:-21930553 Msa0843990:CDS
AATGAGAGAAGCTATCAAAG+AGG 0.650952 5_4:-21930676 Msa0843990:CDS
ATATGCTGCAACAAGAAGAG+AGG 0.651091 5_4:-21927200 Msa0843990:CDS
ATTATAAAGAGGCTATGGAG+GGG 0.655805 5_4:-21929768 Msa0843990:CDS
GTATCATAAACAGCCTAAAG+GGG 0.656109 5_4:-21930721 Msa0843990:CDS
TTTAGAGTTCCGTGCGTTGG+GGG 0.658944 5_4:+21927304 None:intergenic
TTCGAACTAAGTGTTCTGCA+AGG 0.659792 5_4:-21931352 Msa0843990:CDS
AAAATGTTCATGTTTCGTCG+AGG 0.666687 5_4:-21929847 Msa0843990:CDS
TATGTTCTCAGGGTACCAGT+AGG 0.668100 5_4:-21928067 Msa0843990:intron
ATATGAGATGAAGACAATGT+GGG 0.670288 5_4:-21930457 Msa0843990:CDS
CCCATCGCTTCAGCCACAAG+GGG 0.670293 5_4:+21927165 None:intergenic
ATAATTAGCATAAATCAATG+AGG 0.681924 5_4:+21930560 None:intergenic
TCTGGGTGTAACCATCATGG+AGG 0.690656 5_4:-21930828 Msa0843990:CDS
AAACACGTGAGACATACAAG+TGG 0.704359 5_4:-21930770 Msa0843990:CDS
TGTCTGCTCGTGGAAATTGG+GGG 0.731356 5_4:+21928842 None:intergenic
CTGATAACTAGAGATCATAG+CGG 0.769709 5_4:-21927232 Msa0843990:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATGTTGATACTAATAAA+TGG - chr5_4:21927529-21927548 Msa0843990:intron 15.0%
!!! TTTAGAAAATTTATTTTGGT+CGG - chr5_4:21927896-21927915 Msa0843990:intron 15.0%
!!! TTGTTCATTTTTTTTGTTTT+AGG - chr5_4:21930365-21930384 Msa0843990:CDS 15.0%
!!! TAGTAATTTTATTGAATAAC+AGG - chr5_4:21930659-21930678 Msa0843990:CDS 15.0%
!!! ACAATTTTATGAAATCTATG+CGG - chr5_4:21927335-21927354 Msa0843990:CDS 20.0%
!! TATAACTACTTATACAATGA+AGG - chr5_4:21927762-21927781 Msa0843990:intron 20.0%
!!! GACGTTTAGAAAATTTATTT+TGG - chr5_4:21927892-21927911 Msa0843990:intron 20.0%
!! ATAATTAGCATAAATCAATG+AGG + chr5_4:21928288-21928307 None:intergenic 20.0%
!!! AAGTTTAAGATGAATAGATT+TGG - chr5_4:21928749-21928768 Msa0843990:intron 20.0%
!!! TAATTATAATTTGTTTGCAC+AGG - chr5_4:21929443-21929462 Msa0843990:intron 20.0%
!!! AATTATAATTTGTTTGCACA+GGG - chr5_4:21929444-21929463 Msa0843990:intron 20.0%
!! CAATAAAAGAATATCAAAAC+AGG - chr5_4:21929536-21929555 Msa0843990:CDS 20.0%
!! AAAATGGATAAGAATATATG+TGG - chr5_4:21930217-21930236 Msa0843990:CDS 20.0%
!!! TTAGAGTATTTAAAGTTTGA+AGG - chr5_4:21930509-21930528 Msa0843990:CDS 20.0%
!!! CATTTTTTTATCAGCTATTT+TGG - chr5_4:21931093-21931112 Msa0843990:CDS 20.0%
! ATGTAAACAAAGATGATGAT+GGG - chr5_4:21927388-21927407 Msa0843990:CDS 25.0%
! CATAAAACCAAAAATATGAC+AGG + chr5_4:21927691-21927710 None:intergenic 25.0%
!!! TCATATTTTTGGTTTTATGC+TGG - chr5_4:21927692-21927711 Msa0843990:intron 25.0%
!! GTAAACTTTGAAAAGAACAT+TGG + chr5_4:21927858-21927877 None:intergenic 25.0%
! ACAATTTATCACACAATACA+TGG - chr5_4:21928354-21928373 Msa0843990:intron 25.0%
! CAATTTATCACACAATACAT+GGG - chr5_4:21928355-21928374 Msa0843990:intron 25.0%
!! GTATCTAGTTTATCTTGATA+AGG - chr5_4:21928787-21928806 Msa0843990:CDS 25.0%
! ATTTGTGTGAGAAAATAAAG+AGG - chr5_4:21929107-21929126 Msa0843990:intron 25.0%
!!! AAGATACTTGATACTTTTTG+TGG - chr5_4:21929565-21929584 Msa0843990:CDS 25.0%
! TTGTACTAGATTGAAAATGA+AGG - chr5_4:21929621-21929640 Msa0843990:CDS 25.0%
! TGTACTAGATTGAAAATGAA+GGG - chr5_4:21929622-21929641 Msa0843990:CDS 25.0%
!! TTATCTGTCATGTTTTCATT+AGG + chr5_4:21929657-21929676 None:intergenic 25.0%
! AGTAGTTTCTCATAGTTAAT+TGG - chr5_4:21929705-21929724 Msa0843990:CDS 25.0%
! AAAGTAGATGCAATTTGATT+TGG + chr5_4:21929947-21929966 None:intergenic 25.0%
!! TCTCTATTTATGTTAGTTTG+TGG - chr5_4:21930168-21930187 Msa0843990:CDS 25.0%
!!! CTCTATTTATGTTAGTTTGT+GGG - chr5_4:21930169-21930188 Msa0843990:CDS 25.0%
! AAAAATGTCAAAACAGACAT+TGG + chr5_4:21930336-21930355 None:intergenic 25.0%
! ATTAAATCAGTTTAAGCCAT+TGG - chr5_4:21930587-21930606 Msa0843990:CDS 25.0%
! CACAACTAAATTAAGTATCA+TGG + chr5_4:21930754-21930773 None:intergenic 25.0%
!! TATGTTCTTTGTTTGAGTTA+TGG - chr5_4:21930914-21930933 Msa0843990:CDS 25.0%
! TGCAAAGTAAATAACAAGTT+TGG + chr5_4:21930949-21930968 None:intergenic 25.0%
!!! TCAAACTTATGTAGTTTTAG+TGG - chr5_4:21930972-21930991 Msa0843990:CDS 25.0%
! TGGATGAATGTTAATATTTG+TGG - chr5_4:21931113-21931132 Msa0843990:CDS 25.0%
! GATATATTCATCCACAAATA+AGG + chr5_4:21931461-21931480 None:intergenic 25.0%
AGACATAAATGGTGAAGATT+TGG - chr5_4:21927191-21927210 Msa0843990:CDS 30.0%
AATGGTGTGTTTAATGAAGA+AGG - chr5_4:21927222-21927241 Msa0843990:CDS 30.0%
GTTTAATGAAGAAGGAAAAG+AGG - chr5_4:21927230-21927249 Msa0843990:CDS 30.0%
TGGATACTTACAAGAAGATT+AGG - chr5_4:21927256-21927275 Msa0843990:CDS 30.0%
GGATACTTACAAGAAGATTA+GGG - chr5_4:21927257-21927276 Msa0843990:CDS 30.0%
GATGTAAACAAAGATGATGA+TGG - chr5_4:21927387-21927406 Msa0843990:CDS 30.0%
TCGATTAGTATGTAATAGAG+AGG - chr5_4:21927425-21927444 Msa0843990:CDS 30.0%
CGATTAGTATGTAATAGAGA+GGG - chr5_4:21927426-21927445 Msa0843990:CDS 30.0%
AGAAACAAAGTACATATTCG+AGG - chr5_4:21927463-21927482 Msa0843990:CDS 30.0%
ACTAATAAATGGAGAGTTTC+TGG - chr5_4:21927540-21927559 Msa0843990:intron 30.0%
TATCAGATTCACTCAATTGA+CGG + chr5_4:21927629-21927648 None:intergenic 30.0%
! GTTAGAACCTGTCATATTTT+TGG - chr5_4:21927681-21927700 Msa0843990:intron 30.0%
CTACTTATACAATGAAGGAA+AGG - chr5_4:21927767-21927786 Msa0843990:intron 30.0%
!!! AAGCCTCTTGTTATTTTTTC+TGG - chr5_4:21927999-21928018 Msa0843990:CDS 30.0%
!!! AGCCTCTTGTTATTTTTTCT+GGG - chr5_4:21928000-21928019 Msa0843990:CDS 30.0%
ATGTATCATAAACAGCCTAA+AGG - chr5_4:21928122-21928141 Msa0843990:intron 30.0%
TGTATCATAAACAGCCTAAA+GGG - chr5_4:21928123-21928142 Msa0843990:intron 30.0%
TGTGAAGAATCCAAAATTCT+TGG - chr5_4:21928253-21928272 Msa0843990:intron 30.0%
! GAAAAGTCTTCCAAGAATTT+TGG + chr5_4:21928266-21928285 None:intergenic 30.0%
GATTTATGCTAATTATACCG+TGG - chr5_4:21928292-21928311 Msa0843990:intron 30.0%
CTCAATTTCAAATTTGTCCA+CGG + chr5_4:21928312-21928331 None:intergenic 30.0%
! TGGACAAATTTGAAATTGAG+TGG - chr5_4:21928312-21928331 Msa0843990:intron 30.0%
! AATTTGAAATTGAGTGGAAG+AGG - chr5_4:21928318-21928337 Msa0843990:intron 30.0%
! ATTTGAAATTGAGTGGAAGA+GGG - chr5_4:21928319-21928338 Msa0843990:intron 30.0%
ATATGAGATGAAGACAATGT+GGG - chr5_4:21928388-21928407 Msa0843990:intron 30.0%
!!! ATGCGAGAAAACTTTTTTTG+TGG - chr5_4:21928422-21928441 Msa0843990:intron 30.0%
ATAGAGCTGTAAAAGAATAC+AGG - chr5_4:21928540-21928559 Msa0843990:intron 30.0%
AAGCTTCAAAAATCTTTACG+AGG - chr5_4:21928642-21928661 Msa0843990:intron 30.0%
TCTCATGGCACAAATAATAT+GGG + chr5_4:21928870-21928889 None:intergenic 30.0%
! CTTTTGCAAATTAGACTATC+AGG + chr5_4:21928914-21928933 None:intergenic 30.0%
! CTGATAGTCTAATTTGCAAA+AGG - chr5_4:21928912-21928931 Msa0843990:CDS 30.0%
! ATAGTCTAATTTGCAAAAGG+TGG - chr5_4:21928915-21928934 Msa0843990:CDS 30.0%
TAGCCTCTTTATAATCATCT+GGG + chr5_4:21929072-21929091 None:intergenic 30.0%
ATAGCCTCTTTATAATCATC+TGG + chr5_4:21929073-21929092 None:intergenic 30.0%
AGATGATTATAAAGAGGCTA+TGG - chr5_4:21929072-21929091 Msa0843990:intron 30.0%
! ATGTTTTCTTCTTCTTACGA+GGG + chr5_4:21929210-21929229 None:intergenic 30.0%
TCTAAATGAAGTCAATGAAG+AGG - chr5_4:21929312-21929331 Msa0843990:CDS 30.0%
CAAAAACACATTTAACACGA+TGG + chr5_4:21929393-21929412 None:intergenic 30.0%
TAGATTGAAAATGAAGGGAT+TGG - chr5_4:21929627-21929646 Msa0843990:CDS 30.0%
!! TTTGGTCTTCCATTTTAACA+GGG + chr5_4:21929829-21929848 None:intergenic 30.0%
!! TTTTGGTCTTCCATTTTAAC+AGG + chr5_4:21929830-21929849 None:intergenic 30.0%
! CATCTTTCCATGTTACATTT+TGG + chr5_4:21929847-21929866 None:intergenic 30.0%
CAAAATGTAACATGGAAAGA+TGG - chr5_4:21929845-21929864 Msa0843990:CDS 30.0%
TTTGGAAATTGAGGAAAGAT+CGG + chr5_4:21929929-21929948 None:intergenic 30.0%
!! GCAATTTGATTTGGAAATTG+AGG + chr5_4:21929938-21929957 None:intergenic 30.0%
!! CCTTGATTTGGAAAAAATTG+TGG + chr5_4:21929971-21929990 None:intergenic 30.0%
!!! CCACAATTTTTTCCAAATCA+AGG - chr5_4:21929968-21929987 Msa0843990:CDS 30.0%
AAAATTGATGCACCTTGATT+TGG + chr5_4:21929983-21930002 None:intergenic 30.0%
!! ATAATTTTGAGTCGTGCAAA+AGG - chr5_4:21930297-21930316 Msa0843990:CDS 30.0%
AAAACAGACATTGGAACAAA+TGG + chr5_4:21930327-21930346 None:intergenic 30.0%
AATCGATTGAAAGTAACTTC+AGG + chr5_4:21930535-21930554 None:intergenic 30.0%
ACTGCAATTATCTATTCCAA+TGG + chr5_4:21930606-21930625 None:intergenic 30.0%
!! TAACAGGTTTGTTAACCATA+TGG - chr5_4:21930675-21930694 Msa0843990:CDS 30.0%
GATTGCAAATGAAAACCATA+TGG + chr5_4:21930693-21930712 None:intergenic 30.0%
AGTTGTGAAAATATGTTCTC+AGG - chr5_4:21930767-21930786 Msa0843990:CDS 30.0%
GTTGTGAAAATATGTTCTCA+GGG - chr5_4:21930768-21930787 Msa0843990:CDS 30.0%
CTACATTGCATTGCATAAAA+AGG + chr5_4:21931259-21931278 None:intergenic 30.0%
AAGGGATATGTATTCAAAGA+GGG + chr5_4:21931304-21931323 None:intergenic 30.0%
AACTATTTACTGCATTGCAA+GGG + chr5_4:21931322-21931341 None:intergenic 30.0%
ATTTATGTCTCCATCGTTTG+CGG + chr5_4:21927181-21927200 None:intergenic 35.0%
ATTAAACACACCATTACCGT+TGG + chr5_4:21927217-21927236 None:intergenic 35.0%
TGAAGAAGGAAAAGAGGATA+TGG - chr5_4:21927236-21927255 Msa0843990:CDS 35.0%
CAAGAAGATTAGGGAATTGA+CGG - chr5_4:21927266-21927285 Msa0843990:CDS 35.0%
! TTGACGGATGATGATATAAG+AGG - chr5_4:21927282-21927301 Msa0843990:CDS 35.0%
GGATGATGATATAAGAGGAT+TGG - chr5_4:21927287-21927306 Msa0843990:CDS 35.0%
AGGATTGGAATTTGATTCAG+AGG - chr5_4:21927302-21927321 Msa0843990:CDS 35.0%
! AAATCTATGCGGATTGTCAT+GGG - chr5_4:21927346-21927365 Msa0843990:CDS 35.0%
TAGGAACGAAATGAGCATAA+CGG + chr5_4:21927602-21927621 None:intergenic 35.0%
AAGTTTACCACAACAGAAGA+AGG - chr5_4:21927870-21927889 Msa0843990:intron 35.0%
CAAAACACTCATAGTCAATC+CGG + chr5_4:21927932-21927951 None:intergenic 35.0%
! GGATTGACTATGAGTGTTTT+GGG - chr5_4:21927931-21927950 Msa0843990:intron 35.0%
! GATTGACTATGAGTGTTTTG+GGG - chr5_4:21927932-21927951 Msa0843990:intron 35.0%
TTGCATTTGATGCAACATAC+AGG - chr5_4:21927961-21927980 Msa0843990:intron 35.0%
CACCCAGAAAAAATAACAAG+AGG + chr5_4:21928005-21928024 None:intergenic 35.0%
AAATTGTAGTTCCTCCATGA+TGG + chr5_4:21928031-21928050 None:intergenic 35.0%
! CATGGAGGAACTACAATTTT+TGG - chr5_4:21928032-21928051 Msa0843990:CDS 35.0%
GTATCATAAACAGCCTAAAG+GGG - chr5_4:21928124-21928143 Msa0843990:intron 35.0%
AATGAGAGAAGCTATCAAAG+AGG - chr5_4:21928169-21928188 Msa0843990:intron 35.0%
CATATGAGATGAAGACAATG+TGG - chr5_4:21928387-21928406 Msa0843990:intron 35.0%
TGTTGAAAGCAAAAACAGTC+TGG - chr5_4:21928496-21928515 Msa0843990:intron 35.0%
ATACAGGCACAAAGAGTTAA+TGG - chr5_4:21928556-21928575 Msa0843990:intron 35.0%
! TGTAACTTTGTTGTCAACAC+AGG + chr5_4:21928608-21928627 None:intergenic 35.0%
TGTTGACAACAAAGTTACAC+AGG - chr5_4:21928609-21928628 Msa0843990:intron 35.0%
GTGATTGTAGACAGTTTGAA+CGG - chr5_4:21928828-21928847 Msa0843990:CDS 35.0%
GCACAAATAATATGGGAACA+TGG + chr5_4:21928863-21928882 None:intergenic 35.0%
GTCTCATGGCACAAATAATA+TGG + chr5_4:21928871-21928890 None:intergenic 35.0%
TATTATTTGTGCCATGAGAC+AGG - chr5_4:21928871-21928890 Msa0843990:CDS 35.0%
! GTAATCATCCTTTGCTGATT+TGG + chr5_4:21928942-21928961 None:intergenic 35.0%
AAAATGTTCATGTTTCGTCG+AGG - chr5_4:21928998-21929017 Msa0843990:CDS 35.0%
ACACCCAGATGATTATAAAG+AGG - chr5_4:21929066-21929085 Msa0843990:intron 35.0%
TGATTATAAAGAGGCTATGG+AGG - chr5_4:21929075-21929094 Msa0843990:intron 35.0%
GATTATAAAGAGGCTATGGA+GGG - chr5_4:21929076-21929095 Msa0843990:intron 35.0%
ATTATAAAGAGGCTATGGAG+GGG - chr5_4:21929077-21929096 Msa0843990:intron 35.0%
AAGACCAATCCATCTGTTAT+TGG - chr5_4:21929154-21929173 Msa0843990:intron 35.0%
ATCACCAATAACAGATGGAT+TGG + chr5_4:21929161-21929180 None:intergenic 35.0%
ATAGGATCACCAATAACAGA+TGG + chr5_4:21929166-21929185 None:intergenic 35.0%
! TGTTTTCTTCTTCTTACGAG+GGG + chr5_4:21929209-21929228 None:intergenic 35.0%
! GATGTTTTCTTCTTCTTACG+AGG + chr5_4:21929211-21929230 None:intergenic 35.0%
GTAAGAAGAAGAAAACATCC+AGG - chr5_4:21929212-21929231 Msa0843990:CDS 35.0%
AGAAGAAAACATCCAGGAAA+AGG - chr5_4:21929218-21929237 Msa0843990:CDS 35.0%
ACAGATAAAAACATGCACAC+AGG - chr5_4:21929669-21929688 Msa0843990:CDS 35.0%
!! TTGGTCTTCCATTTTAACAG+GGG + chr5_4:21929828-21929847 None:intergenic 35.0%
TGGAAGACCAAAATGTAACA+TGG - chr5_4:21929837-21929856 Msa0843990:CDS 35.0%
!! TTGGCGTCGGTAAAATAATT+AGG + chr5_4:21929884-21929903 None:intergenic 35.0%
!! AATTATTTTACCGACGCCAA+CGG - chr5_4:21929884-21929903 Msa0843990:CDS 35.0%
AAGATCGGAACACTTTGAAT+TGG + chr5_4:21929914-21929933 None:intergenic 35.0%
CAACAGAACTTGAATGTGAT+GGG + chr5_4:21930033-21930052 None:intergenic 35.0%
! CATTCAAGTTCTGTTGGATA+TGG - chr5_4:21930037-21930056 Msa0843990:CDS 35.0%
TACTCACAGTTGTATGATGA+GGG + chr5_4:21930078-21930097 None:intergenic 35.0%
ATACTCACAGTTGTATGATG+AGG + chr5_4:21930079-21930098 None:intergenic 35.0%
GATGGAACGATTAGCAAAAA+TGG - chr5_4:21930201-21930220 Msa0843990:CDS 35.0%
CAGCAGTTAAAGCAACAAAT+AGG + chr5_4:21930406-21930425 None:intergenic 35.0%
TAACTGCTGAAAATCATGAG+TGG - chr5_4:21930417-21930436 Msa0843990:CDS 35.0%
! CTTTTTGCGTGCAATTATCA+CGG - chr5_4:21930713-21930732 Msa0843990:CDS 35.0%
! AAAAGGACATGATAACGAGT+TGG + chr5_4:21930804-21930823 None:intergenic 35.0%
! AACTCGTTATCATGTCCTTT+TGG - chr5_4:21930803-21930822 Msa0843990:CDS 35.0%
AAAAGCCAATCTCATCCAAA+AGG + chr5_4:21930821-21930840 None:intergenic 35.0%
CAACAAGTATTCTCAAGCTA+AGG + chr5_4:21931152-21931171 None:intergenic 35.0%
! AGGTGCTTGTTAACATATTG+TGG + chr5_4:21931239-21931258 None:intergenic 35.0%
AGGGATATGTATTCAAAGAG+GGG + chr5_4:21931303-21931322 None:intergenic 35.0%
CAAGGGATATGTATTCAAAG+AGG + chr5_4:21931305-21931324 None:intergenic 35.0%
CAACTATTTACTGCATTGCA+AGG + chr5_4:21931323-21931342 None:intergenic 35.0%
CTTGCAATGCAGTAAATAGT+TGG - chr5_4:21931321-21931340 Msa0843990:CDS 35.0%
! TTTTTGCCAAAGTTTCGACA+GGG + chr5_4:21931381-21931400 None:intergenic 35.0%
!!! TTTTTTGCCAAAGTTTCGAC+AGG + chr5_4:21931382-21931401 None:intergenic 35.0%
TGAGAACACAATCTTTGAAC+CGG - chr5_4:21931414-21931433 Msa0843990:CDS 35.0%
GCATGCAATTGTCTCAAATT+TGG + chr5_4:21931487-21931506 None:intergenic 35.0%
! CGGAACTCTAAAAATCAATG+TGG - chr5_4:21931552-21931571 Msa0843990:CDS 35.0%
CTGATAACTAGAGATCATAG+CGG - chr5_4:21931613-21931632 Msa0843990:CDS 35.0%
GCAAACGATGGAGACATAAA+TGG - chr5_4:21927180-21927199 Msa0843990:CDS 40.0%
AATGGTGAAGATTTGGCCAA+CGG - chr5_4:21927198-21927217 Msa0843990:CDS 40.0%
! GAAATCTATGCGGATTGTCA+TGG - chr5_4:21927345-21927364 Msa0843990:CDS 40.0%
TGCAGAACACTTAGTTCGAA+TGG + chr5_4:21927493-21927512 None:intergenic 40.0%
TTCGAACTAAGTGTTCTGCA+AGG - chr5_4:21927493-21927512 Msa0843990:CDS 40.0%
GTTAACTCATGGTTGTGTGA+GGG + chr5_4:21927573-21927592 None:intergenic 40.0%
AGTTAACTCATGGTTGTGTG+AGG + chr5_4:21927574-21927593 None:intergenic 40.0%
AGGAACGAAATGAGCATAAC+GGG + chr5_4:21927601-21927620 None:intergenic 40.0%
TCACTCAATTGACGGTTCTT+AGG + chr5_4:21927621-21927640 None:intergenic 40.0%
TCTGATAAAGCCCTTGTTGA+TGG - chr5_4:21927642-21927661 Msa0843990:intron 40.0%
GAAGGAAAGGCAAGAATAGA+AGG - chr5_4:21927780-21927799 Msa0843990:intron 40.0%
GAAAGGCAAGAATAGAAGGT+GGG - chr5_4:21927784-21927803 Msa0843990:intron 40.0%
AAAGGCAAGAATAGAAGGTG+GGG - chr5_4:21927785-21927804 Msa0843990:intron 40.0%
TAAACGTCCTTCTTCTGTTG+TGG + chr5_4:21927880-21927899 None:intergenic 40.0%
! CGGATTGACTATGAGTGTTT+TGG - chr5_4:21927930-21927949 Msa0843990:intron 40.0%
! TTTTCTGGGTGTAACCATCA+TGG - chr5_4:21928014-21928033 Msa0843990:CDS 40.0%
AAACACGTGAGACATACAAG+TGG - chr5_4:21928075-21928094 Msa0843990:intron 40.0%
CAAAGACGATGCAAAGAGTT+TGG + chr5_4:21928200-21928219 None:intergenic 40.0%
CTTTGCATCGTCTTTGTTCA+TGG - chr5_4:21928204-21928223 Msa0843990:intron 40.0%
! AGTCTGGTTGATTTCATGCA+TGG - chr5_4:21928512-21928531 Msa0843990:intron 40.0%
!! GTTTTTGAGCAGTCTAGTCT+CGG - chr5_4:21928716-21928735 Msa0843990:intron 40.0%
TGTAGACAGTTTGAACGGAT+TGG - chr5_4:21928833-21928852 Msa0843990:CDS 40.0%
! AGAACAATGTCTCCTTTTCC+TGG + chr5_4:21929233-21929252 None:intergenic 40.0%
TCTGACCATGACAAAAACGT+TGG - chr5_4:21929349-21929368 Msa0843990:CDS 40.0%
! CACATCCAACGTTTTTGTCA+TGG + chr5_4:21929357-21929376 None:intergenic 40.0%
TGACAAAAACGTTGGATGTG+AGG - chr5_4:21929357-21929376 Msa0843990:CDS 40.0%
! GTGTTGATAAGAGTTGTGAC+AGG - chr5_4:21929466-21929485 Msa0843990:intron 40.0%
AATGTCCAGAGTCAAGATCA+AGG - chr5_4:21929785-21929804 Msa0843990:CDS 40.0%
TGATAACCCCCCTGTTAAAA+TGG - chr5_4:21929817-21929836 Msa0843990:CDS 40.0%
!! TGGTCTTCCATTTTAACAGG+GGG + chr5_4:21929827-21929846 None:intergenic 40.0%
ACTTTGAATTGGAACACCGT+TGG + chr5_4:21929903-21929922 None:intergenic 40.0%
CCAACAGAACTTGAATGTGA+TGG + chr5_4:21930034-21930053 None:intergenic 40.0%
! CCATCACATTCAAGTTCTGT+TGG - chr5_4:21930031-21930050 Msa0843990:CDS 40.0%
TTGCTTGTGATTCGAGAGTT+TGG + chr5_4:21930254-21930273 None:intergenic 40.0%
AACTCTCGAATCACAAGCAA+TGG - chr5_4:21930254-21930273 Msa0843990:CDS 40.0%
CGTGATAATTGCACGCAAAA+AGG + chr5_4:21930715-21930734 None:intergenic 40.0%
! CATGTCCTTTTGGATGAGAT+TGG - chr5_4:21930813-21930832 Msa0843990:CDS 40.0%
!!! TTGGATGAGATTGGCTTTTC+TGG - chr5_4:21930822-21930841 Msa0843990:CDS 40.0%
GGTCAAACTTTGTTGATGTC+TGG - chr5_4:21930993-21931012 Msa0843990:CDS 40.0%
CAAACTTTGTTGATGTCTGG+TGG - chr5_4:21930996-21931015 Msa0843990:CDS 40.0%
! GACATTTTGCACCAAACTGA+AGG + chr5_4:21931182-21931201 None:intergenic 40.0%
!! TCAGTTTGGTGCAAAATGTC+TGG - chr5_4:21931182-21931201 Msa0843990:CDS 40.0%
!! CAGTTTGGTGCAAAATGTCT+GGG - chr5_4:21931183-21931202 Msa0843990:CDS 40.0%
!! AGTTTGGTGCAAAATGTCTG+GGG - chr5_4:21931184-21931203 Msa0843990:CDS 40.0%
! GCTTGTTAACATATTGTGGC+AGG + chr5_4:21931235-21931254 None:intergenic 40.0%
!! GCAATGTAGCAAAAGCATTC+TGG - chr5_4:21931270-21931289 Msa0843990:CDS 40.0%
!! ATCTTCAGCTGCCTTATTTG+TGG - chr5_4:21931447-21931466 Msa0843990:CDS 40.0%
TAAGAACTCAGTTGTTCCTC+AGG - chr5_4:21931507-21931526 Msa0843990:CDS 40.0%
!!! TTTTTAGAGTTCCGTGCGTT+GGG + chr5_4:21931546-21931565 None:intergenic 40.0%
!!! ATTTTTAGAGTTCCGTGCGT+TGG + chr5_4:21931547-21931566 None:intergenic 40.0%
CAATGTGGATGCAAGTTGTT+TGG - chr5_4:21931567-21931586 Msa0843990:CDS 40.0%
TGGCGAATGAGAAAATCAGT+TGG - chr5_4:21931587-21931606 Msa0843990:CDS 40.0%
GGCGAATGAGAAAATCAGTT+GGG - chr5_4:21931588-21931607 Msa0843990:CDS 40.0%
GCGAATGAGAAAATCAGTTG+GGG - chr5_4:21931589-21931608 Msa0843990:CDS 40.0%
ATATGCTGCAACAAGAAGAG+AGG - chr5_4:21931645-21931664 Msa0843990:CDS 40.0%
GAAGATTTGGCCAACGGTAA+TGG - chr5_4:21927204-21927223 Msa0843990:CDS 45.0%
!! AACGGGTTGGAGTTAACTCA+TGG + chr5_4:21927584-21927603 None:intergenic 45.0%
!! ACGAAATGAGCATAACGGGT+TGG + chr5_4:21927597-21927616 None:intergenic 45.0%
!!! GGTTTTATGCTGGCTCAGAA+AGG - chr5_4:21927702-21927721 Msa0843990:intron 45.0%
!! TTTATGCTGGCTCAGAAAGG+AGG - chr5_4:21927705-21927724 Msa0843990:intron 45.0%
AAAGGAGGTCATGAGAGTCT+GGG - chr5_4:21927720-21927739 Msa0843990:intron 45.0%
!! ATGAGAGTCTGGGATTTTGC+AGG - chr5_4:21927730-21927749 Msa0843990:intron 45.0%
GGAAAGGCAAGAATAGAAGG+TGG - chr5_4:21927783-21927802 Msa0843990:intron 45.0%
TGCTGCGTTGAGTTATTTGC+AGG - chr5_4:21927815-21927834 Msa0843990:intron 45.0%
!!! CTATGAGTGTTTTGGGGATG+TGG - chr5_4:21927938-21927957 Msa0843990:intron 45.0%
CCATCAGTAACTACCCCTTT+AGG + chr5_4:21928140-21928159 None:intergenic 45.0%
CCTAAAGGGGTAGTTACTGA+TGG - chr5_4:21928137-21928156 Msa0843990:intron 45.0%
GTGGCATAAGAACTACATCC+AGG - chr5_4:21928441-21928460 Msa0843990:intron 45.0%
AGAACTACATCCAGGTGTGA+AGG - chr5_4:21928449-21928468 Msa0843990:intron 45.0%
TGAGTTTATGCCTTCACACC+TGG + chr5_4:21928462-21928481 None:intergenic 45.0%
AAGGTGGACCAAATCAGCAA+AGG - chr5_4:21928931-21928950 Msa0843990:CDS 45.0%
TGGTGATCCTATCAAAGCCA+AGG - chr5_4:21929174-21929193 Msa0843990:CDS 45.0%
CAAAACTGTCCAGAACTAGC+TGG - chr5_4:21929280-21929299 Msa0843990:intron 45.0%
CAACACCTTGATCTTGACTC+TGG + chr5_4:21929793-21929812 None:intergenic 45.0%
!! GGTCTTCCATTTTAACAGGG+GGG + chr5_4:21929826-21929845 None:intergenic 45.0%
TTGTCTGCTCGTGGAAATTG+GGG + chr5_4:21930007-21930026 None:intergenic 45.0%
GTTGTCTGCTCGTGGAAATT+GGG + chr5_4:21930008-21930027 None:intergenic 45.0%
AGTTGTCTGCTCGTGGAAAT+TGG + chr5_4:21930009-21930028 None:intergenic 45.0%
!! ATGTTAGTTTGTGGGTGCCT+TGG - chr5_4:21930177-21930196 Msa0843990:CDS 45.0%
TGCTAATCGTTCCATCTCCA+AGG + chr5_4:21930197-21930216 None:intergenic 45.0%
! TATGTTCTCAGGGTACCAGT+AGG - chr5_4:21930778-21930797 Msa0843990:CDS 45.0%
! ATGATAACGAGTTGGCCTAC+TGG + chr5_4:21930796-21930815 None:intergenic 45.0%
AATTTGGGCAACTGTGGGAT+GGG + chr5_4:21930873-21930892 None:intergenic 45.0%
CAGACACTGTCCTGCAATTT+GGG + chr5_4:21930888-21930907 None:intergenic 45.0%
TGTGACACATGCATGTCTGA+AGG + chr5_4:21931075-21931094 None:intergenic 45.0%
! AAAATGTCTGGGGTGTAACG+AGG - chr5_4:21931194-21931213 Msa0843990:CDS 45.0%
!! GCTGAAGATGCTACTTTCAC+CGG + chr5_4:21931436-21931455 None:intergenic 45.0%
!!! TTTTAGAGTTCCGTGCGTTG+GGG + chr5_4:21931545-21931564 None:intergenic 45.0%
! TGCGGATTGTCATGGGTTTG+TGG - chr5_4:21927353-21927372 Msa0843990:CDS 50.0%
TGCGTGAAGGCCATCAACAA+GGG + chr5_4:21927655-21927674 None:intergenic 50.0%
TTCTAACACCGTGTGCGTGA+AGG + chr5_4:21927668-21927687 None:intergenic 50.0%
GAAAGGAGGTCATGAGAGTC+TGG - chr5_4:21927719-21927738 Msa0843990:intron 50.0%
!! GAGTCTGGGATTTTGCAGGA+AGG - chr5_4:21927734-21927753 Msa0843990:intron 50.0%
TTTGGTCGGATTCAACCAGC+CGG - chr5_4:21927910-21927929 Msa0843990:intron 50.0%
ACACTCATAGTCAATCCGGC+TGG + chr5_4:21927928-21927947 None:intergenic 50.0%
TCTGGGTGTAACCATCATGG+AGG - chr5_4:21928017-21928036 Msa0843990:CDS 50.0%
AGTCATGTGCTCCTGTCTCA+TGG + chr5_4:21928885-21928904 None:intergenic 50.0%
!! ATAAAGAGGCGTCGTGAGAG+TGG - chr5_4:21929121-21929140 Msa0843990:intron 50.0%
!! CCTTTGGCCTTGGCTTTGAT+AGG + chr5_4:21929184-21929203 None:intergenic 50.0%
CCTATCAAAGCCAAGGCCAA+AGG - chr5_4:21929181-21929200 Msa0843990:CDS 50.0%
ACATCACGTCCAGCTAGTTC+TGG + chr5_4:21929292-21929311 None:intergenic 50.0%
AATTGGAACACCGTTGGCGT+CGG + chr5_4:21929897-21929916 None:intergenic 50.0%
TGTCTGCTCGTGGAAATTGG+GGG + chr5_4:21930006-21930025 None:intergenic 50.0%
CAATTTGGGCAACTGTGGGA+TGG + chr5_4:21930874-21930893 None:intergenic 50.0%
CCTGCAATTTGGGCAACTGT+GGG + chr5_4:21930878-21930897 None:intergenic 50.0%
TCCTGCAATTTGGGCAACTG+TGG + chr5_4:21930879-21930898 None:intergenic 50.0%
GCAGACACTGTCCTGCAATT+TGG + chr5_4:21930889-21930908 None:intergenic 50.0%
GATGACCTTTGCTGCAAGGT+CGG - chr5_4:21931018-21931037 Msa0843990:CDS 50.0%
ATGACCTTTGCTGCAAGGTC+GGG - chr5_4:21931019-21931038 Msa0843990:CDS 50.0%
AGGCATGTGTCAGCAACAAG+AGG + chr5_4:21931055-21931074 None:intergenic 50.0%
GTTGTCACGTGCCTTCAGTT+TGG - chr5_4:21931168-21931187 Msa0843990:CDS 50.0%
CAGTGTCTCTTACCGACAGA+GGG - chr5_4:21931350-21931369 Msa0843990:CDS 50.0%
GCGTTACCCTGTCGAAACTT+TGG - chr5_4:21931372-21931391 Msa0843990:CDS 50.0%
! TTTAGAGTTCCGTGCGTTGG+GGG + chr5_4:21931544-21931563 None:intergenic 50.0%
GACATTCAAGTCTCCCCTTG+TGG - chr5_4:21931667-21931686 Msa0843990:CDS 50.0%
GTGCGTGAAGGCCATCAACA+AGG + chr5_4:21927656-21927675 None:intergenic 55.0%
!! GTTGATGGCCTTCACGCACA+CGG - chr5_4:21927657-21927676 Msa0843990:intron 55.0%
!! CTTCTTACGAGGGGCACCTT+TGG + chr5_4:21929200-21929219 None:intergenic 55.0%
GATGGGAAGTTGTCTGCTCG+TGG + chr5_4:21930016-21930035 None:intergenic 55.0%
GTTTGTGGGTGCCTTGGAGA+TGG - chr5_4:21930183-21930202 Msa0843990:CDS 55.0%
CCCACAGTTGCCCAAATTGC+AGG - chr5_4:21930875-21930894 Msa0843990:CDS 55.0%
GGTGGATGACCTTTGCTGCA+AGG - chr5_4:21931014-21931033 Msa0843990:CDS 55.0%
AAGACCCGACCTTGCAGCAA+AGG + chr5_4:21931026-21931045 None:intergenic 55.0%
! TCTGGGGTGTAACGAGGTGT+CGG - chr5_4:21931200-21931219 Msa0843990:CDS 55.0%
GCAGTGTCTCTTACCGACAG+AGG - chr5_4:21931349-21931368 Msa0843990:CDS 55.0%
GACAGGGTAACGCCCTCTGT+CGG + chr5_4:21931365-21931384 None:intergenic 60.0%
AAGTGTCTGCCCCCAACGCA+CGG - chr5_4:21931532-21931551 Msa0843990:CDS 60.0%
!! ACGAGGGGCACCTTTGGCCT+TGG + chr5_4:21929194-21929213 None:intergenic 65.0%
GGGCAACTGTGGGATGGGTG+AGG + chr5_4:21930868-21930887 None:intergenic 65.0%
GTGCGTTGGGGGCAGACACT+TGG + chr5_4:21931533-21931552 None:intergenic 65.0%
GGGGGCAGACACTTGGCCTG+AGG + chr5_4:21931526-21931545 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 21927174 21931693 21927174 ID=Msa0843990;Name=Msa0843990
chr5_4 mRNA 21927174 21931693 21927174 ID=Msa0843990-mRNA-1;Parent=Msa0843990;Name=Msa0843990-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.6|0.5|0.66|1|1|6|0|1044
chr5_4 exon 21929489 21931693 21929489 ID=Msa0843990-mRNA-1:exon:9062;Parent=Msa0843990-mRNA-1
chr5_4 exon 21929310 21929402 21929310 ID=Msa0843990-mRNA-1:exon:9061;Parent=Msa0843990-mRNA-1
chr5_4 exon 21929166 21929237 21929166 ID=Msa0843990-mRNA-1:exon:9060;Parent=Msa0843990-mRNA-1
chr5_4 exon 21928777 21929073 21928777 ID=Msa0843990-mRNA-1:exon:9059;Parent=Msa0843990-mRNA-1
chr5_4 exon 21927965 21928078 21927965 ID=Msa0843990-mRNA-1:exon:9058;Parent=Msa0843990-mRNA-1
chr5_4 exon 21927174 21927527 21927174 ID=Msa0843990-mRNA-1:exon:9057;Parent=Msa0843990-mRNA-1
chr5_4 CDS 21929489 21931693 21929489 ID=Msa0843990-mRNA-1:cds;Parent=Msa0843990-mRNA-1
chr5_4 CDS 21929310 21929402 21929310 ID=Msa0843990-mRNA-1:cds;Parent=Msa0843990-mRNA-1
chr5_4 CDS 21929166 21929237 21929166 ID=Msa0843990-mRNA-1:cds;Parent=Msa0843990-mRNA-1
chr5_4 CDS 21928777 21929073 21928777 ID=Msa0843990-mRNA-1:cds;Parent=Msa0843990-mRNA-1
chr5_4 CDS 21927965 21928078 21927965 ID=Msa0843990-mRNA-1:cds;Parent=Msa0843990-mRNA-1
chr5_4 CDS 21927174 21927527 21927174 ID=Msa0843990-mRNA-1:cds;Parent=Msa0843990-mRNA-1
Gene Sequence

>Msa0843990

ATGGCCGCAAACGATGGAGACATAAATGGTGAAGATTTGGCCAACGGTAATGGTGTGTTTAATGAAGAAGGAAAAGAGGATATGGATACTTACAAGAAGATTAGGGAATTGACGGATGATGATATAAGAGGATTGGAATTTGATTCAGAGGAAAAAGCGACACAATTTTATGAAATCTATGCGGATTGTCATGGGTTTGTGGTAAGAAAAGATGATGTAAACAAAGATGATGATGGGAATATAATTGCACGTCGATTAGTATGTAATAGAGAGGGTGAGAATAAAAATAAGAAACAAAGTACATATTCGAGGCAGACCATTCGAACTAAGTGTTCTGCAAGGATTCGAGTAGTTTTAAATGTTGATACTAATAAATGGAGAGTTTCTGGATTCGAGCCCTCACACAACCATGAGTTAACTCCAACCCGTTATGCTCATTTCGTTCCTAAGAACCGTCAATTGAGTGAATCTGATAAAGCCCTTGTTGATGGCCTTCACGCACACGGTGTTAGAACCTGTCATATTTTTGGTTTTATGCTGGCTCAGAAAGGAGGTCATGAGAGTCTGGGATTTTGCAGGAAGGACTTATATAACTACTTATACAATGAAGGAAAGGCAAGAATAGAAGGTGGGGATTCTTTTGCTGCGTTGAGTTATTTGCAGGCTAAAGCTGATCATGATCCAATGTTCTTTTCAAAGTTTACCACAACAGAAGAAGGACGTTTAGAAAATTTATTTTGGTCGGATTCAACCAGCCGGATTGACTATGAGTGTTTTGGGGATGTGGTTGCATTTGATGCAACATACAGGAAGAATAGATATGACAAGCCTCTTGTTATTTTTTCTGGGTGTAACCATCATGGAGGAACTACAATTTTTGGTTGTGCTTTAGTTTCTAATGAAACACGTGAGACATACAAGTGGCTTTTAAATACATTTTTAGAAGCAATGTATCATAAACAGCCTAAAGGGGTAGTTACTGATGGAGATCTTTCAATGAGAGAAGCTATCAAAGAGGTATTTCCAAACTCTTTGCATCGTCTTTGTTCATGGCATTTTCATCGAAACGCTGAAGAGAATGTGAAGAATCCAAAATTCTTGGAAGACTTTTCCTCATTGATTTATGCTAATTATACCGTGGACAAATTTGAAATTGAGTGGAAGAGGGTCATTGATGATTACAATTTATCACACAATACATGGGTTAAAAAAGCATATGAGATGAAGACAATGTGGGCGAGTGCATACATGCGAGAAAACTTTTTTTGTGGCATAAGAACTACATCCAGGTGTGAAGGCATAAACTCATTTATAAATATGTATGTTGAAAGCAAAAACAGTCTGGTTGATTTCATGCATGGTTTTAATAGAGCTGTAAAAGAATACAGGCACAAAGAGTTAATGGCAGATTTTAATACGTTCTATTACAAACCTGTGTTGACAACAAAGTTACACAGGTTTGAGCTTGAAGCTTCAAAAATCTTTACGAGGATAAAATTTTATGAAGTTCAAAATGAAATAGAAGATGCAATCACATTAAATGTTTTTGAGCAGTCTAGTCTCGGAAAGACTGTGAAGTTTAAGATGAATAGATTTGGCAACAAAGATTCTACGTATCTAGTTTATCTTGATAAGGAACAAAGTAAATTTTTATGTGATTGTAGACAGTTTGAACGGATTGGAATTCCATGTTCCCATATTATTTGTGCCATGAGACAGGAGCACATGACTGAGTTTCCTGATAGTCTAATTTGCAAAAGGTGGACCAAATCAGCAAAGGATGATTACATATCGTCTATGTCTTCTAAAGAATGCGATGATGAAAAAATGTTCATGTTTCGTCGAGGAACTATGTCTACTGCATTGAATAATCTATATGACATTTCTTGTAAACACCCAGATGATTATAAAGAGGCTATGGAGGGGATTTACAATTTGTGTGAGAAAATAAAGAGGCGTCGTGAGAGTGGTGAAAAATATAAGACCAATCCATCTGTTATTGGTGATCCTATCAAAGCCAAGGCCAAAGGTGCCCCTCGTAAGAAGAAGAAAACATCCAGGAAAAGGAGACATTGTTCTCTCTGCAAAAATATTGCTCACACGAAGCAAAACTGTCCAGAACTAGCTGGACGTGATGTTCTAAATGAAGTCAATGAAGAGGACTATTCTCGTCGATCTGACCATGACAAAAACGTTGGATGTGAGGGTGTTGATAAGAGTTGTGACAGGAAGCGTAAGAGAAAAGTTGTCAATGTTACTTCAATGCAAGAAGATATCAATAAAAGAATATCAAAACAGATTGAAAATGAAGGGATTGGTCGACCTAATGAAAACATGACAGATAAAAACATGCACACAGGATTTGACAACAGTCAAGATCAAGGTGTTGTACATGATAACCCCCCTGTTAAAATGGAAGACCAAAATGTAACATGGAAAGATGGTTCAATGTATGTTCCTAATTATTTTACCGACGCCAACGGTGTTCCAATTCAAAGTGTTCCGATCTTTCCTCAATTTCCAAATCAAATTGCATCTACTTTTCCACAATTTTTTCCAAATCAAGGTGCATCAATTTTCCCCCAATTTCCACGAGCAGACAACTTCCCATCACATTCAAGTTCTGTTGGATATGGCAGAGCACATAATGTCCCTCATCATACAACTGGTACCAGTAGGCCAACTCGTTATCATGTCCTTTTGGATGAGATTGGCTTTTCTGGTAGCAGTCATGATATCAATGCCTCACCCATCCCACAGTTGCCCAAATTGCAGGACAGTTTGGCTGCTGCAGTGTCTCTTACCGACAGAGGGCGTTACCCTGTCGAAACTTTGGCAAAAAATACTTTTGTCTTTGAGAACACAATCTTTGAACCGGTGAAAGTAGCATCTTCAGCTGCCTTATTTGTGGATGAATATATCAGACCAAATTTGAGACAATTGCATGCTAAGAACTCAGTTGTTCCTCAGGCCAAGTGTCTGCCCCCAACGCACGGAACTCTAAAAATCAATGTGGATGCAAGTTGTTTGGCGAATGAGAAAATCAGTTGGGGACTGATAACTAGAGATCATAGCGGATCAGTTCTATATGCTGCAACAAGAAGAGAGGACATTCAAGTCTCCCCTTGTGGCTGA
Protein sequence

>Msa0843990

MAANDGDINGEDLANGNGVFNEEGKEDMDTYKKIRELTDDDIRGLEFDSEEKATQFYEIYADCHGFVVRKDDVNKDDDGNIIARRLVCNREGENKNKKQSTYSRQTIRTKCSARIRVVLNVDTNKWRVSGFEPSHNHELTPTRYAHFVPKNRQLSESDKALVDGLHAHGVRTCHIFGFMLAQKGGHESLGFCRKDLYNYLYNEGKARIEGGDSFAALSYLQAKADHDPMFFSKFTTTEEGRLENLFWSDSTSRIDYECFGDVVAFDATYRKNRYDKPLVIFSGCNHHGGTTIFGCALVSNETRETYKWLLNTFLEAMYHKQPKGVVTDGDLSMREAIKEVFPNSLHRLCSWHFHRNAEENVKNPKFLEDFSSLIYANYTVDKFEIEWKRVIDDYNLSHNTWVKKAYEMKTMWASAYMRENFFCGIRTTSRCEGINSFINMYVESKNSLVDFMHGFNRAVKEYRHKELMADFNTFYYKPVLTTKLHRFELEASKIFTRIKFYEVQNEIEDAITLNVFEQSSLGKTVKFKMNRFGNKDSTYLVYLDKEQSKFLCDCRQFERIGIPCSHIICAMRQEHMTEFPDSLICKRWTKSAKDDYISSMSSKECDDEKMFMFRRGTMSTALNNLYDISCKHPDDYKEAMEGIYNLCEKIKRRRESGEKYKTNPSVIGDPIKAKAKGAPRKKKKTSRKRRHCSLCKNIAHTKQNCPELAGRDVLNEVNEEDYSRRSDHDKNVGCEGVDKSCDRKRKRKVVNVTSMQEDINKRISKQIENEGIGRPNENMTDKNMHTGFDNSQDQGVVHDNPPVKMEDQNVTWKDGSMYVPNYFTDANGVPIQSVPIFPQFPNQIASTFPQFFPNQGASIFPQFPRADNFPSHSSSVGYGRAHNVPHHTTGTSRPTRYHVLLDEIGFSGSSHDINASPIPQLPKLQDSLAAAVSLTDRGRYPVETLAKNTFVFENTIFEPVKVASSAALFVDEYIRPNLRQLHAKNSVVPQAKCLPPTHGTLKINVDASCLANEKISWGLITRDHSGSVLYAATRREDIQVSPCG*