Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0858670 | XP_024639724.1 | 93.321 | 1108 | 65 | 3 | 1 | 1103 | 1 | 1104 | 0.0 | 2047 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0858670 | sp|Q5T5C0|STXB5_HUMAN | 22.417 | 571 | 335 | 21 | 21 | 562 | 37 | 528 | 6.23e-15 | 84.0 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0858670 | G7K253 | 93.682 | 1108 | 63 | 2 | 1 | 1103 | 1 | 1106 | 0.0 | 2035 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0780280 | Msa0858670 | 0.802036 | 6.786529e-49 | -8.615850e-47 |
Msa0818250 | Msa0858670 | 0.803482 | 3.413301e-49 | -8.615850e-47 |
Msa0429090 | Msa0858670 | 0.800126 | 1.668362e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0858670 | MtrunA17_Chr5g0437271 | 93.682 | 1108 | 63 | 2 | 1 | 1103 | 1 | 1106 | 0.0 | 2035 |
Msa0858670 | MtrunA17_Chr7g0242611 | 43.172 | 1135 | 598 | 24 | 1 | 1103 | 1 | 1120 | 0.0 | 831 |
Msa0858670 | MtrunA17_Chr8g0370421 | 25.729 | 1131 | 669 | 41 | 31 | 1099 | 29 | 1050 | 2.73e-80 | 285 |
Msa0858670 | MtrunA17_Chr5g0407041 | 23.729 | 767 | 436 | 32 | 179 | 890 | 100 | 772 | 8.94e-26 | 114 |
Msa0858670 | MtrunA17_Chr5g0407051 | 43.519 | 108 | 61 | 0 | 31 | 138 | 53 | 160 | 1.32e-22 | 95.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0858670 | AT5G05570.2 | 43.965 | 1135 | 568 | 21 | 1 | 1103 | 1 | 1099 | 0.0 | 886 |
Msa0858670 | AT5G05570.1 | 43.166 | 1156 | 572 | 23 | 1 | 1103 | 1 | 1124 | 0.0 | 872 |
Msa0858670 | AT4G35560.1 | 24.799 | 1121 | 687 | 35 | 31 | 1099 | 28 | 1044 | 1.50e-64 | 238 |
Msa0858670 | AT4G35560.2 | 24.955 | 1122 | 685 | 36 | 31 | 1099 | 28 | 1045 | 6.93e-64 | 236 |
Find 218 sgRNAs with CRISPR-Local
Find 952 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTGTTGCGGTGGTGATTTC+TGG | 0.176465 | 5_4:-56272059 | None:intergenic |
TTGCATTTCGTGACAGAAAA+TGG | 0.178027 | 5_4:+56280769 | Msa0858670:CDS |
AAGTTGCATAATTTCTTTAT+TGG | 0.189070 | 5_4:+56286737 | Msa0858670:exon |
AGCAGATCATAATAATTATT+TGG | 0.194201 | 5_4:+56285524 | Msa0858670:CDS |
GTCTATGGTGGCAATGAAAT+TGG | 0.197910 | 5_4:+56278767 | Msa0858670:CDS |
GCAGGTAAATGATGTTAAAA+TGG | 0.201006 | 5_4:+56280540 | Msa0858670:intron |
ACATTTGTTGGAACATAATA+AGG | 0.234954 | 5_4:-56273936 | None:intergenic |
CACCAGTGTAGGAGAATAAT+AGG | 0.257039 | 5_4:-56278704 | None:intergenic |
AAGATGGATCTGCTCGGATA+TGG | 0.259958 | 5_4:+56280325 | Msa0858670:CDS |
TGAAGTTCTTAGCTATATTA+AGG | 0.263036 | 5_4:-56285470 | None:intergenic |
CAGTCTTCAAGTTCCATCTT+AGG | 0.266809 | 5_4:-56283770 | None:intergenic |
TTTCTGTTTCGTTGAACTTC+AGG | 0.276066 | 5_4:-56271911 | None:intergenic |
CCTTTGATTGGTGGTGTTCC+AGG | 0.279311 | 5_4:+56280249 | Msa0858670:CDS |
CTATTTGTATTGACGAATCT+TGG | 0.285405 | 5_4:+56279648 | Msa0858670:CDS |
TCTCCTCAGCAGAATGATTC+TGG | 0.288652 | 5_4:+56282399 | Msa0858670:CDS |
AGTATGTAGGTTCGTCTCTA+TGG | 0.290264 | 5_4:+56280718 | Msa0858670:intron |
ACTTCTTTCTCTGTTATATA+CGG | 0.291439 | 5_4:+56273721 | Msa0858670:CDS |
TGTTCCAACAAATGTTATAT+CGG | 0.294403 | 5_4:+56273944 | Msa0858670:CDS |
GAGAAATTTGTATTTATATT+CGG | 0.296622 | 5_4:-56271942 | None:intergenic |
TAGAACAACTGAAGAAATTA+AGG | 0.301995 | 5_4:+56285932 | Msa0858670:CDS |
CTTCATCAACCCTGTTCTAA+TGG | 0.302147 | 5_4:+56275917 | Msa0858670:CDS |
AACATTCTTCAAGCATTTAG+AGG | 0.317234 | 5_4:+56273083 | Msa0858670:CDS |
AAGATAGTGGCTAGTTATTC+AGG | 0.318283 | 5_4:+56278452 | Msa0858670:CDS |
GACGAATGGAAAATCGTAAA+TGG | 0.325409 | 5_4:+56286703 | Msa0858670:CDS |
AGAGAAGTGCCGAGATAAAA+TGG | 0.334360 | 5_4:+56280226 | Msa0858670:CDS |
TTACCCGATATAACATTTGT+TGG | 0.346603 | 5_4:-56273948 | None:intergenic |
GGGCTACAGTTTGCAAATCT+TGG | 0.347017 | 5_4:+56281817 | Msa0858670:CDS |
TCTGATTCATTTGCTTCTTT+AGG | 0.354321 | 5_4:+56286836 | Msa0858670:three_prime_UTR |
TCTTCAGTTGTTCTAGCTCT+TGG | 0.355041 | 5_4:-56285924 | None:intergenic |
AGATACTGAAACAGGGAATA+TGG | 0.358040 | 5_4:+56282198 | Msa0858670:CDS |
AGGAAATAAGCTCTGTATCT+TGG | 0.359377 | 5_4:+56278528 | Msa0858670:CDS |
GATGGTAGGATAAAAGTATT+TGG | 0.360608 | 5_4:+56273021 | Msa0858670:CDS |
ATCAATTGGACAAATAATTC+TGG | 0.360778 | 5_4:+56283818 | Msa0858670:CDS |
AAACTGGAGACATTGAATTA+AGG | 0.364682 | 5_4:+56282760 | Msa0858670:CDS |
CAGGGAATATGGTTTGTAAT+AGG | 0.368072 | 5_4:+56282209 | Msa0858670:CDS |
TAGATGGTGATATAATGTTT+TGG | 0.371617 | 5_4:+56278588 | Msa0858670:CDS |
TTGCCTCTTTCCATTAGAAC+AGG | 0.375687 | 5_4:-56275927 | None:intergenic |
ACAATATGTTCTTCATCAAT+TGG | 0.383361 | 5_4:+56283804 | Msa0858670:CDS |
CCGAGCATGATGCGTAATAC+TGG | 0.384061 | 5_4:+56271874 | Msa0858670:five_prime_UTR |
CCATTCTTAAAGCCTTCTTC+AGG | 0.384364 | 5_4:+56285576 | Msa0858670:CDS |
GCAATTTCAATGCACATCAT+AGG | 0.385607 | 5_4:+56282259 | Msa0858670:CDS |
CCGCGAGTTGTTCTTCACTA+TGG | 0.387922 | 5_4:+56272328 | Msa0858670:CDS |
CTTCAAAATTCTGCTGTATG+TGG | 0.396912 | 5_4:+56281796 | Msa0858670:CDS |
GACAGAATTTCAACTTCTAA+AGG | 0.397500 | 5_4:-56286780 | None:intergenic |
TTAATTCAATGTCTCCAGTT+TGG | 0.400081 | 5_4:-56282758 | None:intergenic |
AAGATCAGATAGTTCTCATC+AGG | 0.403804 | 5_4:+56278402 | Msa0858670:CDS |
TGAGCTTTGACTGGTCTTGT+GGG | 0.407964 | 5_4:+56279517 | Msa0858670:CDS |
AAGGCTAAATATAGAAAGAC+TGG | 0.413685 | 5_4:+56285951 | Msa0858670:CDS |
AGGTTTGGGATTTGAGAAAC+AGG | 0.418719 | 5_4:+56273662 | Msa0858670:intron |
GGAAATAAGCTCTGTATCTT+GGG | 0.426177 | 5_4:+56278529 | Msa0858670:CDS |
TTACAGTTCTTGGAAAATCA+AGG | 0.427421 | 5_4:+56273384 | Msa0858670:intron |
AGTTATCATCAGCAGATAGA+AGG | 0.432852 | 5_4:+56278678 | Msa0858670:CDS |
CCCTTGTAAAAGAATGTGTC+TGG | 0.441598 | 5_4:+56282685 | Msa0858670:CDS |
TTGCCCGGATAGTCTACATC+TGG | 0.445557 | 5_4:+56280597 | Msa0858670:CDS |
TTGTTGTGGTCCAGGTTAGT+TGG | 0.446398 | 5_4:+56273849 | Msa0858670:intron |
CTGGTTGTTCTGTACCAAAC+TGG | 0.447741 | 5_4:+56282744 | Msa0858670:CDS |
ACAGCCAGATGTAGACTATC+CGG | 0.447873 | 5_4:-56280601 | None:intergenic |
CTTGGAGGGAAGCTTGTAGT+TGG | 0.448435 | 5_4:+56281835 | Msa0858670:CDS |
CAGGTAAATGATGTTAAAAT+GGG | 0.449646 | 5_4:+56280541 | Msa0858670:intron |
GAGATAAAATGGCCTTTGAT+TGG | 0.449769 | 5_4:+56280237 | Msa0858670:CDS |
GTTCCAACAAATGTTATATC+GGG | 0.451431 | 5_4:+56273945 | Msa0858670:CDS |
CGACGGCAGCTGCACTTGCA+AGG | 0.452163 | 5_4:+56286057 | Msa0858670:CDS |
TTGAGCTTTGACTGGTCTTG+TGG | 0.452488 | 5_4:+56279516 | Msa0858670:CDS |
TTCGTCTCTATGGGCTAATA+CGG | 0.453485 | 5_4:+56280728 | Msa0858670:CDS |
TTTGCATGCTCAACTTATTG+AGG | 0.462627 | 5_4:-56286951 | None:intergenic |
TTCATTCAAATATACATAGC+AGG | 0.466518 | 5_4:+56280297 | Msa0858670:CDS |
GTTGCGATAGATACTGAAAC+AGG | 0.468218 | 5_4:+56282190 | Msa0858670:CDS |
TCTATGGTGGCAATGAAATT+GGG | 0.471044 | 5_4:+56278768 | Msa0858670:CDS |
AACAGAGAAAGAAGTTATGA+TGG | 0.472549 | 5_4:-56273713 | None:intergenic |
GCTATATTAAGGAAGATAGA+AGG | 0.474014 | 5_4:-56285459 | None:intergenic |
AAACAGAATTGATGATGTAA+TGG | 0.474833 | 5_4:-56282011 | None:intergenic |
AATTCAAATTGATGAGCCTA+TGG | 0.477147 | 5_4:+56285729 | Msa0858670:CDS |
ATTTCTGACAACTCTGCAAA+GGG | 0.478560 | 5_4:+56282133 | Msa0858670:CDS |
CGTATTGATGTTGCACTTCG+TGG | 0.478633 | 5_4:+56279564 | Msa0858670:CDS |
ACAGTTCATAATGTGAATCA+AGG | 0.478859 | 5_4:+56281742 | Msa0858670:intron |
TGCTTGATTTGTATCGTGAT+CGG | 0.480638 | 5_4:-56285505 | None:intergenic |
AGATGACAAAGAATGTGTTC+TGG | 0.481491 | 5_4:+56282725 | Msa0858670:CDS |
AATTATGTGCTACCTCAGAC+AGG | 0.481690 | 5_4:-56279839 | None:intergenic |
ATACTGAAGAGTTGCAGAAT+GGG | 0.482169 | 5_4:+56286643 | Msa0858670:CDS |
TTCAAGTAACAATGAAATAC+AGG | 0.482483 | 5_4:+56273422 | Msa0858670:CDS |
AAAACCATCCTGTGTATCTT+CGG | 0.486549 | 5_4:-56285601 | None:intergenic |
AGGGTAGCAATAAGTACATA+AGG | 0.487453 | 5_4:+56282655 | Msa0858670:intron |
CTCTAATGTCAATCCTAAGA+TGG | 0.493683 | 5_4:+56283757 | Msa0858670:CDS |
TTACCAACTCTGGACGTGTT+GGG | 0.496950 | 5_4:+56283726 | Msa0858670:CDS |
AGATGGATCTGCTCGGATAT+GGG | 0.497118 | 5_4:+56280326 | Msa0858670:CDS |
CACACCTTTGCAGAAGCAGT+TGG | 0.497150 | 5_4:+56275860 | Msa0858670:intron |
AGGTTAGTTGGAACTGAGCA+TGG | 0.497319 | 5_4:+56273861 | Msa0858670:intron |
TTTGGTGGTGAGAATATTGA+AGG | 0.497322 | 5_4:+56273039 | Msa0858670:CDS |
CGAATTGAAGAGAAAGATAG+TGG | 0.498982 | 5_4:+56278439 | Msa0858670:CDS |
CATACTGAAGAGTTGCAGAA+TGG | 0.500754 | 5_4:+56286642 | Msa0858670:CDS |
TTCTTGTCCCTGTTGTCCTG+TGG | 0.504601 | 5_4:+56284897 | Msa0858670:CDS |
CATAGAAACTACTGCAGATG+TGG | 0.505967 | 5_4:-56282053 | None:intergenic |
AGCCTTGCTGTTGTCATCTG+TGG | 0.508479 | 5_4:-56279780 | None:intergenic |
TCTAGCAAGTTCACTTGCCA+TGG | 0.511512 | 5_4:-56286682 | None:intergenic |
TACATAGCAGGTTACCAAGA+TGG | 0.512482 | 5_4:+56280309 | Msa0858670:CDS |
TCCCTATTATTCTCCTACAC+TGG | 0.512485 | 5_4:+56278702 | Msa0858670:CDS |
AGAACACGAAGAAGAAGATA+AGG | 0.513937 | 5_4:+56278508 | Msa0858670:CDS |
CTTGTAGTTGGATATGAACA+TGG | 0.514827 | 5_4:+56281847 | Msa0858670:CDS |
TCATCAGAATGTTCATTCGT+AGG | 0.515750 | 5_4:-56278479 | None:intergenic |
TTCACTCTTGTAGTGATGGT+AGG | 0.515770 | 5_4:+56273007 | Msa0858670:intron |
ATGATGGCATATTGCATTGT+GGG | 0.516843 | 5_4:-56279741 | None:intergenic |
TGCTTGAAGAATGTTTGCTT+AGG | 0.517218 | 5_4:-56273075 | None:intergenic |
CCTGAAGAAGGCTTTAAGAA+TGG | 0.517281 | 5_4:-56285576 | None:intergenic |
GACGGATCAGTTGTCGTCGT+TGG | 0.521478 | 5_4:+56278560 | Msa0858670:CDS |
ATAGAAAGTCTCAAGTGTAC+TGG | 0.522037 | 5_4:+56279540 | Msa0858670:CDS |
CTACAGTTTGCAAATCTTGG+AGG | 0.522207 | 5_4:+56281820 | Msa0858670:CDS |
TTGCGTTTGATCACGTTCAA+CGG | 0.523866 | 5_4:+56272374 | Msa0858670:CDS |
GTATGTAGGTTCGTCTCTAT+GGG | 0.524655 | 5_4:+56280719 | Msa0858670:intron |
CCCTCTGCATGGCAATCACT+AGG | 0.525157 | 5_4:-56279612 | None:intergenic |
AAAATCAATATTGACAAGAA+AGG | 0.528424 | 5_4:+56285769 | Msa0858670:CDS |
AATAAAACATTGAATAGAAG+TGG | 0.528774 | 5_4:+56278731 | Msa0858670:CDS |
TGAAGACAAGGAAAAGACTC+TGG | 0.529949 | 5_4:-56285281 | None:intergenic |
GTATCTTCGGTGCCTGAAGA+AGG | 0.530235 | 5_4:-56285588 | None:intergenic |
CTGTAAATGACTTCACATCT+TGG | 0.534618 | 5_4:-56279815 | None:intergenic |
AATTGCTTCTGCTTTGCAGT+GGG | 0.535466 | 5_4:+56273687 | Msa0858670:CDS |
CACGAAGTGCAACATCAATA+CGG | 0.540450 | 5_4:-56279563 | None:intergenic |
ACCAGTGTAGGAGAATAATA+GGG | 0.540501 | 5_4:-56278703 | None:intergenic |
ATCATTCTGCTGAGGAGAGT+GGG | 0.541127 | 5_4:-56282394 | None:intergenic |
GGTGGAAAGTAGTGTTTCTT+CGG | 0.546679 | 5_4:+56272294 | Msa0858670:CDS |
CTTACCAACTCTGGACGTGT+TGG | 0.546982 | 5_4:+56283725 | Msa0858670:CDS |
ATATCCGAGCAGATCCATCT+TGG | 0.547047 | 5_4:-56280323 | None:intergenic |
ATTGCATTCGAGTTTACACT+TGG | 0.547306 | 5_4:-56282241 | None:intergenic |
TATGACAAGGGATTCACACT+TGG | 0.548005 | 5_4:+56282168 | Msa0858670:CDS |
CAACACGTCCAGAGTTGGTA+AGG | 0.548367 | 5_4:-56283724 | None:intergenic |
TCTTCAATTCGATGTCCTTG+TGG | 0.548394 | 5_4:-56278427 | None:intergenic |
TTCAAAATTCTGCTGTATGT+GGG | 0.548646 | 5_4:+56281797 | Msa0858670:CDS |
TGTCCTGTGGAAAAGAGCTC+TGG | 0.555166 | 5_4:+56284910 | Msa0858670:CDS |
CGTTCAACGGTTATTAGCAG+TGG | 0.555873 | 5_4:+56272387 | Msa0858670:CDS |
AACCCTGTTCTAATGGAAAG+AGG | 0.559247 | 5_4:+56275924 | Msa0858670:CDS |
GCAAGAATAGACGCAGTCGA+TGG | 0.561605 | 5_4:-56272355 | None:intergenic |
GACGGCAGCTGCACTTGCAA+GGG | 0.562703 | 5_4:+56286058 | Msa0858670:CDS |
CCAGTATTACGCATCATGCT+CGG | 0.563163 | 5_4:-56271874 | None:intergenic |
AGGCTTTAAGAATGGAGGAC+TGG | 0.564616 | 5_4:-56285568 | None:intergenic |
CTTTGATGTCTGAGCAACAA+AGG | 0.566165 | 5_4:+56279706 | Msa0858670:CDS |
TGCAAGTGCAGCTGCCGTCG+AGG | 0.566225 | 5_4:-56286054 | None:intergenic |
GTCATCTGTGGTTCAAGAGT+GGG | 0.568399 | 5_4:-56279768 | None:intergenic |
GAGCAGGTCCTTACCAACTC+TGG | 0.571166 | 5_4:+56283716 | Msa0858670:intron |
AGTTGGAACTGAGCATGGGT+TGG | 0.574007 | 5_4:+56273866 | Msa0858670:CDS |
AATCATTCTGCTGAGGAGAG+TGG | 0.575730 | 5_4:-56282395 | None:intergenic |
AAATTGCTTCTGCTTTGCAG+TGG | 0.577634 | 5_4:+56273686 | Msa0858670:CDS |
TCTCCCAACACGTCCAGAGT+TGG | 0.578730 | 5_4:-56283729 | None:intergenic |
ATTGATGATGATGAAGAAGA+TGG | 0.580722 | 5_4:-56272021 | None:intergenic |
CAGCCAGATGTAGACTATCC+GGG | 0.582862 | 5_4:-56280600 | None:intergenic |
TGTATATTTGAATGAAAAGA+CGG | 0.583068 | 5_4:-56280290 | None:intergenic |
TACAGTTTGCAAATCTTGGA+GGG | 0.586333 | 5_4:+56281821 | Msa0858670:CDS |
AGGCTAAATATAGAAAGACT+GGG | 0.587018 | 5_4:+56285952 | Msa0858670:CDS |
ATAAAATGGCCTTTGATTGG+TGG | 0.587731 | 5_4:+56280240 | Msa0858670:CDS |
GTCATTTACAGCCCTGTCTG+AGG | 0.594238 | 5_4:+56279827 | Msa0858670:CDS |
GTCGTCGTTGGATATGTAGA+TGG | 0.595156 | 5_4:+56278572 | Msa0858670:CDS |
GTATCTTGGGCATCTAGTGA+CGG | 0.595418 | 5_4:+56278542 | Msa0858670:CDS |
TAGCAATAAGTACATAAGGA+AGG | 0.597631 | 5_4:+56282659 | Msa0858670:CDS |
CGTAATACTGGTGATTCACA+CGG | 0.598272 | 5_4:+56271886 | Msa0858670:five_prime_UTR |
TTCAAGAGTGGGAATGATGA+TGG | 0.598649 | 5_4:-56279757 | None:intergenic |
TATTTCTGACAACTCTGCAA+AGG | 0.599095 | 5_4:+56282132 | Msa0858670:CDS |
ACAGGGTTGATGAAGAACTC+TGG | 0.600908 | 5_4:-56275909 | None:intergenic |
GATAGTCTACATCTGGCTGT+TGG | 0.604738 | 5_4:+56280604 | Msa0858670:CDS |
TTCAGGCACCGAAGATACAC+AGG | 0.605357 | 5_4:+56285593 | Msa0858670:CDS |
GTCTAGCTTAAACATTCCAC+AGG | 0.606335 | 5_4:+56282096 | Msa0858670:CDS |
AAGTTCTCCAGTGTCAGCAT+TGG | 0.607832 | 5_4:+56280570 | Msa0858670:CDS |
CCTGGAACACCACCAATCAA+AGG | 0.608241 | 5_4:-56280249 | None:intergenic |
GGTTAGTTGGAACTGAGCAT+GGG | 0.608569 | 5_4:+56273862 | Msa0858670:intron |
CTGGCTGTTGGTGATGAAAG+TGG | 0.611131 | 5_4:+56280616 | Msa0858670:CDS |
TGCCTCTTTCCATTAGAACA+GGG | 0.611881 | 5_4:-56275926 | None:intergenic |
CAGTTCATAATGTGAATCAA+GGG | 0.612046 | 5_4:+56281743 | Msa0858670:intron |
GAAAACACTGCTTTGCAATG+AGG | 0.616465 | 5_4:-56281772 | None:intergenic |
CCTAGTGATTGCCATGCAGA+GGG | 0.617023 | 5_4:+56279612 | Msa0858670:CDS |
AGTTCTCATCAGGGACCACA+AGG | 0.617447 | 5_4:+56278412 | Msa0858670:CDS |
AAAACATTGAATAGAAGTGG+AGG | 0.617937 | 5_4:+56278734 | Msa0858670:CDS |
ATAGAAACTACTGCAGATGT+GGG | 0.618620 | 5_4:-56282052 | None:intergenic |
CTTGCTTCAGGATGCCTCGA+CGG | 0.619387 | 5_4:+56286040 | Msa0858670:intron |
GGCTAGTGTTCATTATGACA+AGG | 0.619615 | 5_4:+56282155 | Msa0858670:CDS |
AAGTGAACTTGCTAGACGAA+TGG | 0.621419 | 5_4:+56286689 | Msa0858670:CDS |
GTTCAACGGTTATTAGCAGT+GGG | 0.622725 | 5_4:+56272388 | Msa0858670:CDS |
CGGTGTTCAGCAACAGAATG+TGG | 0.624625 | 5_4:+56272273 | Msa0858670:intron |
TCAATAAGTTGAGCATGCAA+AGG | 0.626737 | 5_4:+56286953 | Msa0858670:three_prime_UTR |
AGTTGGATATGAACATGGGA+AGG | 0.628932 | 5_4:+56281852 | Msa0858670:CDS |
TTGGTGGTGAGAATATTGAA+GGG | 0.629583 | 5_4:+56273040 | Msa0858670:CDS |
TAGCTAAGAACTTCAAATCG+AGG | 0.630137 | 5_4:+56285478 | Msa0858670:CDS |
GATGATGGCATATTGCATTG+TGG | 0.630266 | 5_4:-56279742 | None:intergenic |
TATTACAATCTCCCTCTGCA+TGG | 0.632021 | 5_4:-56279623 | None:intergenic |
GTGACAGAAAATGGAACCGA+AGG | 0.634509 | 5_4:+56280778 | Msa0858670:CDS |
ACCGTTGAAGATTGTTGCGG+TGG | 0.635846 | 5_4:-56272069 | None:intergenic |
TACTGAAGAGTTGCAGAATG+GGG | 0.635999 | 5_4:+56286644 | Msa0858670:CDS |
GCCTAGTGATTGCCATGCAG+AGG | 0.636569 | 5_4:+56279611 | Msa0858670:CDS |
TTATAAACAAGTGACAAAGC+AGG | 0.637082 | 5_4:-56280360 | None:intergenic |
TGTCATCTGTGGTTCAAGAG+TGG | 0.638520 | 5_4:-56279769 | None:intergenic |
GCTAGTGTTCATTATGACAA+GGG | 0.639345 | 5_4:+56282156 | Msa0858670:CDS |
AGAACTTCATCATGAAGACA+AGG | 0.642789 | 5_4:-56285293 | None:intergenic |
TCTATTGGAGAGTCAGCAGT+AGG | 0.642948 | 5_4:-56278617 | None:intergenic |
AGATCAGATAGTTCTCATCA+GGG | 0.643028 | 5_4:+56278403 | Msa0858670:CDS |
CAACTTCTAAAGGATTGCAG+CGG | 0.646615 | 5_4:-56286770 | None:intergenic |
GTTCCAGAATCATTCTGCTG+AGG | 0.648310 | 5_4:-56282402 | None:intergenic |
GGCACCGAAGATACACAGGA+TGG | 0.649427 | 5_4:+56285597 | Msa0858670:CDS |
CATAATGTGAATCAAGGGGA+CGG | 0.651066 | 5_4:+56281748 | Msa0858670:CDS |
AGACAGACAGAAGTTACTTG+AGG | 0.652763 | 5_4:+56285881 | Msa0858670:CDS |
TGTTTATAACATAAATCCCG+AGG | 0.654267 | 5_4:+56280374 | Msa0858670:CDS |
TGTTCAGCAACAGAATGTGG+TGG | 0.656033 | 5_4:+56272276 | Msa0858670:intron |
GAAGAAGGCTTTAAGAATGG+AGG | 0.657165 | 5_4:-56285573 | None:intergenic |
GTTACCAAGATGGATCTGCT+CGG | 0.661877 | 5_4:+56280319 | Msa0858670:CDS |
ATGGAACTTGAAGACTGACA+TGG | 0.662632 | 5_4:+56283776 | Msa0858670:CDS |
ACCACCGCAACAATCTTCAA+CGG | 0.666980 | 5_4:+56272068 | Msa0858670:CDS |
GAATGGAAAATCGTAAATGG+TGG | 0.667397 | 5_4:+56286706 | Msa0858670:CDS |
TTGCATTCGAGTTTACACTT+GGG | 0.670972 | 5_4:-56282240 | None:intergenic |
TTGTAGTTGGATATGAACAT+GGG | 0.670988 | 5_4:+56281848 | Msa0858670:CDS |
CCATAGTGAAGAACAACTCG+CGG | 0.672868 | 5_4:-56272328 | None:intergenic |
TGATGTAATGGTATCAAGCA+TGG | 0.674373 | 5_4:-56281999 | None:intergenic |
ATATCAGATACAGATTCCTG+TGG | 0.676172 | 5_4:-56282112 | None:intergenic |
TGATGGCATATTGCATTGTG+GGG | 0.677148 | 5_4:-56279740 | None:intergenic |
GGTAGGATAAAAGTATTTGG+TGG | 0.678180 | 5_4:+56273024 | Msa0858670:CDS |
CGTACCGTTGAAGATTGTTG+CGG | 0.687491 | 5_4:-56272072 | None:intergenic |
AGTTCATAATGTGAATCAAG+GGG | 0.688551 | 5_4:+56281744 | Msa0858670:intron |
GGCTAAATATAGAAAGACTG+GGG | 0.696264 | 5_4:+56285953 | Msa0858670:CDS |
AACCACAGATGACAACAGCA+AGG | 0.696333 | 5_4:+56279778 | Msa0858670:CDS |
ATTATGTGCTACCTCAGACA+GGG | 0.702402 | 5_4:-56279838 | None:intergenic |
TTGCGATAGATACTGAAACA+GGG | 0.714072 | 5_4:+56282191 | Msa0858670:CDS |
CAAGGGATAAGCTTGTAGAG+CGG | 0.731093 | 5_4:+56286075 | Msa0858670:CDS |
GATGGCATATTGCATTGTGG+GGG | 0.733280 | 5_4:-56279739 | None:intergenic |
TTTCTGACAACTCTGCAAAG+GGG | 0.733913 | 5_4:+56282134 | Msa0858670:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTTAATTTAATTTAATTG+AGG | + | chr5_4:56277131-56277150 | Msa0858670:intron | 10.0% |
!! | AAAACATGTAAAATTAATTT+AGG | + | chr5_4:56277989-56278008 | Msa0858670:intron | 10.0% |
!!! | TTGTTTTCAATTTTAATTAA+AGG | + | chr5_4:56278095-56278114 | Msa0858670:intron | 10.0% |
!!! | AATATACAAATTTTGAAAAT+AGG | + | chr5_4:56278186-56278205 | Msa0858670:intron | 10.0% |
!!! | TTTTCATTATCTTTTTAAAA+AGG | - | chr5_4:56280122-56280141 | None:intergenic | 10.0% |
!! | AATTTAGAAAAAATGTTAAA+AGG | + | chr5_4:56280921-56280940 | Msa0858670:intron | 10.0% |
!! | ATTTAGAAAAAATGTTAAAA+GGG | + | chr5_4:56280922-56280941 | Msa0858670:intron | 10.0% |
!!! | AAAAAGTTAAAATACTTTTA+AGG | - | chr5_4:56285822-56285841 | None:intergenic | 10.0% |
!! | AATTATTATTCTTTATTAGA+AGG | - | chr5_4:56286532-56286551 | None:intergenic | 10.0% |
!! | GAGAAATTTGTATTTATATT+CGG | - | chr5_4:56271945-56271964 | None:intergenic | 15.0% |
!!! | TATTAATTGCTTGTTATTAT+TGG | + | chr5_4:56272423-56272442 | Msa0858670:intron | 15.0% |
!! | AAAATAATAATAAGCACATA+CGG | - | chr5_4:56273500-56273519 | None:intergenic | 15.0% |
!!! | ACTCTATTTTTTTTTTTTTG+AGG | + | chr5_4:56274748-56274767 | Msa0858670:intron | 15.0% |
!!! | TTACTTATTTTCATATATTG+CGG | + | chr5_4:56275587-56275606 | Msa0858670:intron | 15.0% |
!!! | TTATACACATTTTAACTTAA+AGG | - | chr5_4:56276180-56276199 | None:intergenic | 15.0% |
!!! | CATTTTTTTATTGTAGTTTA+GGG | + | chr5_4:56276401-56276420 | Msa0858670:intron | 15.0% |
!! | AAAAATTTAGTGCAAATTTA+AGG | - | chr5_4:56276768-56276787 | None:intergenic | 15.0% |
!! | AATAAAATAAGTAAAATCTC+AGG | + | chr5_4:56277031-56277050 | Msa0858670:intron | 15.0% |
!! | GAAATATAAAATGGTTAAAT+GGG | + | chr5_4:56277377-56277396 | Msa0858670:intron | 15.0% |
!!! | ATTTTTTTATCTTGATCTAT+TGG | - | chr5_4:56278635-56278654 | None:intergenic | 15.0% |
!!! | TTGAAGAATAAATAATTTGT+TGG | + | chr5_4:56279342-56279361 | Msa0858670:intron | 15.0% |
!!! | TTTTAAAAAGGATAAAACTT+AGG | - | chr5_4:56280110-56280129 | None:intergenic | 15.0% |
!! | TTTAGAAAAAATGTTAAAAG+GGG | + | chr5_4:56280923-56280942 | Msa0858670:intron | 15.0% |
!!! | ACAATAGAAAATTCATATTT+TGG | + | chr5_4:56283107-56283126 | Msa0858670:intron | 15.0% |
!!! | CAATAGAAAATTCATATTTT+GGG | + | chr5_4:56283108-56283127 | Msa0858670:intron | 15.0% |
!!! | CATATATAGTTCTAATTATT+TGG | - | chr5_4:56283410-56283429 | None:intergenic | 15.0% |
!! | CAAATAATTAGAACTATATA+TGG | + | chr5_4:56283408-56283427 | Msa0858670:intron | 15.0% |
!!! | CTTATACATCTTAAAATTTT+GGG | + | chr5_4:56284241-56284260 | Msa0858670:intron | 15.0% |
!!! | ATTTTCTTTTCTTTTTCTTT+TGG | - | chr5_4:56284524-56284543 | None:intergenic | 15.0% |
!!! | AAAAGCATTTAAATAGATAA+AGG | + | chr5_4:56284587-56284606 | Msa0858670:intron | 15.0% |
!!! | AAAGCATTTAAATAGATAAA+GGG | + | chr5_4:56284588-56284607 | Msa0858670:intron | 15.0% |
!!! | TTTAACTTTTTAACAATGAA+TGG | + | chr5_4:56285831-56285850 | Msa0858670:intron | 15.0% |
!! | TTTCATATTCATTAAATAGT+AGG | - | chr5_4:56286185-56286204 | None:intergenic | 15.0% |
!! | CTTGATAAATCAATAATTTA+TGG | - | chr5_4:56286332-56286351 | None:intergenic | 15.0% |
!!! | ATTTTTTTTTAATAGAGATG+TGG | - | chr5_4:56286375-56286394 | None:intergenic | 15.0% |
!! | GAATAATAATTATTGAAACT+TGG | + | chr5_4:56286541-56286560 | Msa0858670:intron | 15.0% |
!! | ATGTAATCAATATTACACTT+AGG | - | chr5_4:56272492-56272511 | None:intergenic | 20.0% |
!! | CTCATTAAGATTTAAATGTA+AGG | + | chr5_4:56274116-56274135 | Msa0858670:intron | 20.0% |
!! | AACTTATATACAACATAACA+TGG | - | chr5_4:56274376-56274395 | None:intergenic | 20.0% |
!!! | CATTGAAATCAAATTTTTGA+TGG | + | chr5_4:56274508-56274527 | Msa0858670:intron | 20.0% |
!!! | AAATCAAATTTTTGATGGTT+TGG | + | chr5_4:56274513-56274532 | Msa0858670:intron | 20.0% |
!!! | TGAGAAGAATTTTTGTTTAT+TGG | + | chr5_4:56274873-56274892 | Msa0858670:intron | 20.0% |
!! | TAATATCTTCAATAAAGAAC+TGG | + | chr5_4:56274905-56274924 | Msa0858670:intron | 20.0% |
!! | AATATCTTCAATAAAGAACT+GGG | + | chr5_4:56274906-56274925 | Msa0858670:intron | 20.0% |
!! | AAATATCTTCAATAAAGAAC+TGG | + | chr5_4:56275001-56275020 | Msa0858670:intron | 20.0% |
!! | AATATCTTCAATAAAGAACT+GGG | + | chr5_4:56274906-56274925 | Msa0858670:intron | 20.0% |
!! | ATAAATATGTCTGATTAAAC+TGG | - | chr5_4:56275402-56275421 | None:intergenic | 20.0% |
!!! | GATAATAAGTGGTTTAATTT+AGG | - | chr5_4:56275444-56275463 | None:intergenic | 20.0% |
!! | AATTTGTAATTCAAAGTTCT+AGG | + | chr5_4:56275528-56275547 | Msa0858670:intron | 20.0% |
!!! | TTATCAATGTTTTCTTCATT+GGG | + | chr5_4:56275551-56275570 | Msa0858670:intron | 20.0% |
!! | AACAATAATCTTCTCTAATA+TGG | - | chr5_4:56275701-56275720 | None:intergenic | 20.0% |
!! | ATTAAGTTAGATGTTAAACT+TGG | - | chr5_4:56275829-56275848 | None:intergenic | 20.0% |
!!! | AAACTTCAAGATTTTCTTAT+TGG | + | chr5_4:56275959-56275978 | Msa0858670:CDS | 20.0% |
!!! | ATGGATTTTGGTTAATTTTT+TGG | + | chr5_4:56276012-56276031 | Msa0858670:intron | 20.0% |
!! | TATGCATGAAAAGTAATAAT+GGG | - | chr5_4:56276203-56276222 | None:intergenic | 20.0% |
!! | TTATGCATGAAAAGTAATAA+TGG | - | chr5_4:56276204-56276223 | None:intergenic | 20.0% |
!!! | ATACTTTTTACCAAAACTTA+GGG | - | chr5_4:56276254-56276273 | None:intergenic | 20.0% |
!!! | TATACTTTTTACCAAAACTT+AGG | - | chr5_4:56276255-56276274 | None:intergenic | 20.0% |
!!! | GCATTTTTTTATTGTAGTTT+AGG | + | chr5_4:56276400-56276419 | Msa0858670:intron | 20.0% |
!! | GAAGGTTTAAAAGATTTAAT+TGG | - | chr5_4:56276635-56276654 | None:intergenic | 20.0% |
!! | AAAATATAGATGACTATGAT+CGG | - | chr5_4:56276830-56276849 | None:intergenic | 20.0% |
!!! | ATCATAGTCATCTATATTTT+TGG | + | chr5_4:56276830-56276849 | Msa0858670:intron | 20.0% |
!!! | ATTTTCAAATGAAGCAAATT+TGG | - | chr5_4:56276905-56276924 | None:intergenic | 20.0% |
!!! | TAATTTGCCAAGATATAATT+TGG | + | chr5_4:56277063-56277082 | Msa0858670:intron | 20.0% |
!! | CATTTAACCAAATTATATCT+TGG | - | chr5_4:56277073-56277092 | None:intergenic | 20.0% |
!! | CAAGATATAATTTGGTTAAA+TGG | + | chr5_4:56277071-56277090 | Msa0858670:intron | 20.0% |
!! | AATTAAAACGGAAAAAAGTT+TGG | - | chr5_4:56277120-56277139 | None:intergenic | 20.0% |
!! | CGAAATATAAAATGGTTAAA+TGG | + | chr5_4:56277376-56277395 | Msa0858670:intron | 20.0% |
!! | GAAATTAACAAGAAAAAGTT+TGG | - | chr5_4:56277425-56277444 | None:intergenic | 20.0% |
!! | TGATATTTGTCTTAGAATTT+CGG | + | chr5_4:56277509-56277528 | Msa0858670:intron | 20.0% |
!! | ACTAAAACAAAAATAGACAT+TGG | - | chr5_4:56277934-56277953 | None:intergenic | 20.0% |
!!! | ACAACAGGATTATATTTTTA+TGG | + | chr5_4:56278219-56278238 | Msa0858670:intron | 20.0% |
!!! | ACTTCTATTCAATGTTTTAT+TGG | - | chr5_4:56278732-56278751 | None:intergenic | 20.0% |
!! | AATAAAACATTGAATAGAAG+TGG | + | chr5_4:56278731-56278750 | Msa0858670:CDS | 20.0% |
!! | TTTATGACAGTTTAAATTTG+TGG | - | chr5_4:56278921-56278940 | None:intergenic | 20.0% |
!!! | TAATGTGAAAATTTTGTGTA+AGG | + | chr5_4:56279043-56279062 | Msa0858670:intron | 20.0% |
!! | AATTAATTAATAATGCACAG+AGG | - | chr5_4:56279312-56279331 | None:intergenic | 20.0% |
!! | TATAAAAATTACAGTGTCAA+TGG | + | chr5_4:56279407-56279426 | Msa0858670:intron | 20.0% |
!!! | TTTTTCTTTTTCTTTCAAGA+GGG | + | chr5_4:56280006-56280025 | Msa0858670:intron | 20.0% |
!! | TGTATATTTGAATGAAAAGA+CGG | - | chr5_4:56280293-56280312 | None:intergenic | 20.0% |
!! | AAAATGTGTATAGTATGATA+AGG | - | chr5_4:56280404-56280423 | None:intergenic | 20.0% |
!! | ATTAATCTGCTAAAGAAAAT+TGG | + | chr5_4:56280891-56280910 | Msa0858670:intron | 20.0% |
!! | TTAATCTGCTAAAGAAAATT+GGG | + | chr5_4:56280892-56280911 | Msa0858670:intron | 20.0% |
!!! | TTTTCAATTAATGATTGATG+TGG | + | chr5_4:56280965-56280984 | Msa0858670:intron | 20.0% |
!! | TTTCAATTAATGATTGATGT+GGG | + | chr5_4:56280966-56280985 | Msa0858670:intron | 20.0% |
!!! | TTTCGTTTTAGATTTACTTA+AGG | + | chr5_4:56281001-56281020 | Msa0858670:intron | 20.0% |
!!! | TTCGTTTTAGATTTACTTAA+GGG | + | chr5_4:56281002-56281021 | Msa0858670:intron | 20.0% |
!!! | ATTTTTACCATGTTGAAATT+TGG | + | chr5_4:56281291-56281310 | Msa0858670:intron | 20.0% |
!! | ACATTTATTTCGAAAAGAAA+AGG | - | chr5_4:56281896-56281915 | None:intergenic | 20.0% |
!! | GTAGATTAGAAAATATAAGT+TGG | - | chr5_4:56281968-56281987 | None:intergenic | 20.0% |
!! | GTCAATAACTTAATTACTTA+CGG | + | chr5_4:56282319-56282338 | Msa0858670:intron | 20.0% |
!! | AAGTAATATTTGAAGGAAAA+CGG | - | chr5_4:56282598-56282617 | None:intergenic | 20.0% |
!! | AGGAATAAAGTAATATTTGA+AGG | - | chr5_4:56282605-56282624 | None:intergenic | 20.0% |
!! | ATGACTTGAATATTGTTATA+AGG | - | chr5_4:56282817-56282836 | None:intergenic | 20.0% |
!!! | TCTTTTTACTTTATTATGAG+AGG | + | chr5_4:56283150-56283169 | Msa0858670:intron | 20.0% |
!!! | CTTTTTACTTTATTATGAGA+GGG | + | chr5_4:56283151-56283170 | Msa0858670:intron | 20.0% |
!! | ATATCAAAAGTAAAGCAAAA+AGG | + | chr5_4:56283217-56283236 | Msa0858670:intron | 20.0% |
!!! | ATATAGTTCTAATTATTTGG+AGG | - | chr5_4:56283407-56283426 | None:intergenic | 20.0% |
!!! | CCAAAATTTTAAGATGTATA+AGG | - | chr5_4:56284243-56284262 | None:intergenic | 20.0% |
!!! | CCTTATACATCTTAAAATTT+TGG | + | chr5_4:56284240-56284259 | Msa0858670:intron | 20.0% |
!! | AAATGCTAGATTTAAAGATT+AGG | + | chr5_4:56284347-56284366 | Msa0858670:intron | 20.0% |
!!! | AGAAATATTGTTGTTAATTG+TGG | - | chr5_4:56284501-56284520 | None:intergenic | 20.0% |
!!! | TCTATTTAAATGCTTTTTGA+AGG | - | chr5_4:56284584-56284603 | None:intergenic | 20.0% |
!! | AAGCATTTAAATAGATAAAG+GGG | + | chr5_4:56284589-56284608 | Msa0858670:intron | 20.0% |
!! | ATTATAAAACCAAAAGCTAT+TGG | - | chr5_4:56284829-56284848 | None:intergenic | 20.0% |
!! | TTTCATTGACCTATAAAAAA+AGG | - | chr5_4:56284866-56284885 | None:intergenic | 20.0% |
!!! | TTTTTCCCATTTATTTTTTC+AGG | + | chr5_4:56285402-56285421 | Msa0858670:intron | 20.0% |
!! | AGCAGATCATAATAATTATT+TGG | + | chr5_4:56285524-56285543 | Msa0858670:CDS | 20.0% |
!! | AAAATCAATATTGACAAGAA+AGG | + | chr5_4:56285769-56285788 | Msa0858670:CDS | 20.0% |
!!! | ACATAGATTTTTCATGTATA+AGG | + | chr5_4:56286251-56286270 | Msa0858670:intron | 20.0% |
!!! | TTCTCCAAATTTTGTTTATT+AGG | + | chr5_4:56286570-56286589 | Msa0858670:intron | 20.0% |
!! | GAAACCTAATAAACAAAATT+TGG | - | chr5_4:56286577-56286596 | None:intergenic | 20.0% |
!! | AAGTTGCATAATTTCTTTAT+TGG | + | chr5_4:56286737-56286756 | Msa0858670:exon | 20.0% |
! | ATATTACACTTAGGTATCAA+TGG | - | chr5_4:56272483-56272502 | None:intergenic | 25.0% |
!! | GTGTTTCTTTTCTTAATGTA+AGG | + | chr5_4:56272801-56272820 | Msa0858670:intron | 25.0% |
! | TTTCTTTATTGTGATGATTG+AGG | + | chr5_4:56272908-56272927 | Msa0858670:intron | 25.0% |
! | TCAGTCATTTGATCTTATAT+TGG | + | chr5_4:56273155-56273174 | Msa0858670:intron | 25.0% |
! | AACTGTAAGAAAGATGTAAA+AGG | - | chr5_4:56273372-56273391 | None:intergenic | 25.0% |
! | TTCAAGTAACAATGAAATAC+AGG | + | chr5_4:56273422-56273441 | Msa0858670:CDS | 25.0% |
! | AATAAATGAAACAGAGGAAA+GGG | - | chr5_4:56273613-56273632 | None:intergenic | 25.0% |
! | TAATAAATGAAACAGAGGAA+AGG | - | chr5_4:56273614-56273633 | None:intergenic | 25.0% |
! | GTTGAACATGTTTATGATAA+TGG | + | chr5_4:56273638-56273657 | Msa0858670:intron | 25.0% |
! | ACTTCTTTCTCTGTTATATA+CGG | + | chr5_4:56273721-56273740 | Msa0858670:CDS | 25.0% |
!! | ACAAGTATTTTACATGTAAC+TGG | - | chr5_4:56273749-56273768 | None:intergenic | 25.0% |
!! | ACATTTGTTGGAACATAATA+AGG | - | chr5_4:56273939-56273958 | None:intergenic | 25.0% |
! | TGTTCCAACAAATGTTATAT+CGG | + | chr5_4:56273944-56273963 | Msa0858670:CDS | 25.0% |
! | GCTCATTTATATATTTGAGT+TGG | + | chr5_4:56273986-56274005 | Msa0858670:intron | 25.0% |
!!! | TTTTTCCTTTTGTTTGAGTT+TGG | + | chr5_4:56274062-56274081 | Msa0858670:intron | 25.0% |
!! | TTTATGTAAAAGTGCACATT+AGG | + | chr5_4:56274315-56274334 | Msa0858670:intron | 25.0% |
!! | TTATGTAAAAGTGCACATTA+GGG | + | chr5_4:56274316-56274335 | Msa0858670:intron | 25.0% |
!!! | TTTCTTCACCAAAAAGTATT+AGG | + | chr5_4:56274567-56274586 | Msa0858670:intron | 25.0% |
!!! | TTCTTCACCAAAAAGTATTA+GGG | + | chr5_4:56274568-56274587 | Msa0858670:intron | 25.0% |
!! | ATGTTGGATTAGATTAAGTA+AGG | + | chr5_4:56274625-56274644 | Msa0858670:intron | 25.0% |
!! | TGTTGGATTAGATTAAGTAA+GGG | + | chr5_4:56274626-56274645 | Msa0858670:intron | 25.0% |
! | TAAATCAAACTAAAGCTAAC+TGG | + | chr5_4:56275049-56275068 | Msa0858670:intron | 25.0% |
! | TGACTTACAGTCTAATTATA+GGG | + | chr5_4:56275140-56275159 | Msa0858670:intron | 25.0% |
!! | TCTAGTTTGAATAACTAAGA+GGG | + | chr5_4:56275312-56275331 | Msa0858670:intron | 25.0% |
! | TTGTGTACATAGATAATAAG+TGG | - | chr5_4:56275455-56275474 | None:intergenic | 25.0% |
!! | GTTATCAATGTTTTCTTCAT+TGG | + | chr5_4:56275550-56275569 | Msa0858670:intron | 25.0% |
!! | CAATTTACAAAGCACTAATA+TGG | - | chr5_4:56275622-56275641 | None:intergenic | 25.0% |
! | GAAGATTATTGTTAGAAAAG+TGG | + | chr5_4:56275708-56275727 | Msa0858670:intron | 25.0% |
! | TTTCTCAAATGAAAAGAAAC+TGG | - | chr5_4:56275793-56275812 | None:intergenic | 25.0% |
!!! | TACTTTTTACCAAAACTTAG+GGG | - | chr5_4:56276253-56276272 | None:intergenic | 25.0% |
!!! | ATGAAGTTCAATGTTTTGAT+TGG | - | chr5_4:56276671-56276690 | None:intergenic | 25.0% |
! | TATTATACAATGCAAGACAA+GGG | - | chr5_4:56276733-56276752 | None:intergenic | 25.0% |
! | TTATTATACAATGCAAGACA+AGG | - | chr5_4:56276734-56276753 | None:intergenic | 25.0% |
! | TGGACAAAAATGAGAATTTA+AGG | + | chr5_4:56276850-56276869 | Msa0858670:intron | 25.0% |
! | GGACAAAAATGAGAATTTAA+GGG | + | chr5_4:56276851-56276870 | Msa0858670:intron | 25.0% |
!! | AAATGAGAATTTAAGGGTTT+TGG | + | chr5_4:56276857-56276876 | Msa0858670:intron | 25.0% |
!! | AATGAGAATTTAAGGGTTTT+GGG | + | chr5_4:56276858-56276877 | Msa0858670:intron | 25.0% |
! | TTGCTTCATTTGAAAATACA+TGG | + | chr5_4:56276908-56276927 | Msa0858670:intron | 25.0% |
!! | GCAATGAAGTCAAAAAATTT+TGG | + | chr5_4:56277002-56277021 | Msa0858670:intron | 25.0% |
! | AAAATAAGTAAAATCTCAGG+AGG | + | chr5_4:56277034-56277053 | Msa0858670:intron | 25.0% |
! | GTTTCTCAATTAAATTAGAG+GGG | - | chr5_4:56277328-56277347 | None:intergenic | 25.0% |
! | GGTTTCTCAATTAAATTAGA+GGG | - | chr5_4:56277329-56277348 | None:intergenic | 25.0% |
! | TGGTTTCTCAATTAAATTAG+AGG | - | chr5_4:56277330-56277349 | None:intergenic | 25.0% |
!! | AAACCAGACTTTTAGATTTA+GGG | + | chr5_4:56277344-56277363 | Msa0858670:intron | 25.0% |
! | TCTATCAATAAATGCTAGTT+TGG | + | chr5_4:56277658-56277677 | Msa0858670:intron | 25.0% |
! | TAAATTACAATGAAAACCAG+CGG | + | chr5_4:56277700-56277719 | Msa0858670:intron | 25.0% |
! | TGTTGAAGACAAAAATTTGA+AGG | - | chr5_4:56277840-56277859 | None:intergenic | 25.0% |
! | AACAAAAATAGACATTGGAT+TGG | - | chr5_4:56277929-56277948 | None:intergenic | 25.0% |
! | TAATAACCATAGTTGTTCTA+AGG | + | chr5_4:56278066-56278085 | Msa0858670:intron | 25.0% |
! | AATAACCATAGTTGTTCTAA+GGG | + | chr5_4:56278067-56278086 | Msa0858670:intron | 25.0% |
!! | TAGATGGTGATATAATGTTT+TGG | + | chr5_4:56278588-56278607 | Msa0858670:CDS | 25.0% |
!! | AGATGGTGATATAATGTTTT+GGG | + | chr5_4:56278589-56278608 | Msa0858670:CDS | 25.0% |
!!! | GTATTAGAAAAGTTTTTTCC+TGG | + | chr5_4:56279076-56279095 | Msa0858670:intron | 25.0% |
! | TGAAGATGATAGATGAAATA+TGG | + | chr5_4:56279103-56279122 | Msa0858670:intron | 25.0% |
! | AGTCAAAATACAACATCATT+TGG | - | chr5_4:56279235-56279254 | None:intergenic | 25.0% |
!!! | AATAATTTGTTGGAACTGTT+AGG | + | chr5_4:56279352-56279371 | Msa0858670:intron | 25.0% |
!!! | ATAATTTGTTGGAACTGTTA+GGG | + | chr5_4:56279353-56279372 | Msa0858670:intron | 25.0% |
! | AGAAAAGTGAAAACTAATTG+TGG | - | chr5_4:56279379-56279398 | None:intergenic | 25.0% |
!!! | TTTTTTTTCTTCCTGTTTAC+AGG | + | chr5_4:56279491-56279510 | Msa0858670:intron | 25.0% |
!! | GTTTTTCTTTTTCTTTCAAG+AGG | + | chr5_4:56280005-56280024 | Msa0858670:intron | 25.0% |
!!! | GTTTTTCTCTAAAAAGATAG+TGG | - | chr5_4:56280060-56280079 | None:intergenic | 25.0% |
! | TTCATTCAAATATACATAGC+AGG | + | chr5_4:56280297-56280316 | Msa0858670:CDS | 25.0% |
!!! | ACTATACACATTTTAACTAG+TGG | + | chr5_4:56280410-56280429 | Msa0858670:intron | 25.0% |
!!! | TTATATATTAGAGCATCGTT+CGG | - | chr5_4:56280450-56280469 | None:intergenic | 25.0% |
! | CAGGTAAATGATGTTAAAAT+GGG | + | chr5_4:56280541-56280560 | Msa0858670:intron | 25.0% |
! | TTCAATTAATGATTGATGTG+GGG | + | chr5_4:56280967-56280986 | Msa0858670:intron | 25.0% |
! | CAACTACGTTTCAAAAATTT+AGG | - | chr5_4:56281039-56281058 | None:intergenic | 25.0% |
!!! | CTAAATTTTTGAAACGTAGT+TGG | + | chr5_4:56281037-56281056 | Msa0858670:intron | 25.0% |
! | AAGTTGTGAAAAATTTATGG+CGG | - | chr5_4:56281119-56281138 | None:intergenic | 25.0% |
! | GCAAAGTTGTGAAAAATTTA+TGG | - | chr5_4:56281122-56281141 | None:intergenic | 25.0% |
! | ATAATCTACCAAATGTACAA+GGG | - | chr5_4:56281181-56281200 | None:intergenic | 25.0% |
! | GATTATGGTGCATTTAATAT+CGG | + | chr5_4:56281195-56281214 | Msa0858670:intron | 25.0% |
! | TTTGAGAAGAGTTTATAAAG+AGG | - | chr5_4:56281362-56281381 | None:intergenic | 25.0% |
!! | TTTTTGTGCCAATAATATTG+GGG | - | chr5_4:56281418-56281437 | None:intergenic | 25.0% |
!! | CTTTTTGTGCCAATAATATT+GGG | - | chr5_4:56281419-56281438 | None:intergenic | 25.0% |
!! | TCTTTTTGTGCCAATAATAT+TGG | - | chr5_4:56281420-56281439 | None:intergenic | 25.0% |
! | GTGTTTAACACAGAAAATAT+TGG | - | chr5_4:56281498-56281517 | None:intergenic | 25.0% |
!! | TATTTTCTAATCTACTTTGC+AGG | + | chr5_4:56281973-56281992 | Msa0858670:intron | 25.0% |
!!! | AAACAGAATTGATGATGTAA+TGG | - | chr5_4:56282014-56282033 | None:intergenic | 25.0% |
!! | TGTATTTTCAGATTGAATGT+TGG | - | chr5_4:56282433-56282452 | None:intergenic | 25.0% |
! | AATTTGATTAATCGGTTGAA+AGG | - | chr5_4:56282625-56282644 | None:intergenic | 25.0% |
! | AGTAAGGCAATTTGATTAAT+CGG | - | chr5_4:56282633-56282652 | None:intergenic | 25.0% |
!!! | TTGCTTTACTTTTGATATCA+GGG | - | chr5_4:56283215-56283234 | None:intergenic | 25.0% |
!!! | TTTGCTTTACTTTTGATATC+AGG | - | chr5_4:56283216-56283235 | None:intergenic | 25.0% |
!!! | GATAGTCTTTTAGTTTGAAA+AGG | - | chr5_4:56283385-56283404 | None:intergenic | 25.0% |
! | GTTCATATTATAATCTTGAC+TGG | + | chr5_4:56283441-56283460 | Msa0858670:intron | 25.0% |
! | CAAGACTGTGATTTAATATT+GGG | - | chr5_4:56283486-56283505 | None:intergenic | 25.0% |
! | ACAATATGTTCTTCATCAAT+TGG | + | chr5_4:56283804-56283823 | Msa0858670:CDS | 25.0% |
! | ATCAATTGGACAAATAATTC+TGG | + | chr5_4:56283818-56283837 | Msa0858670:CDS | 25.0% |
!! | CAGATCAATCAAATAAGTTT+TGG | - | chr5_4:56283895-56283914 | None:intergenic | 25.0% |
!!! | TCTTAAAATTTTGGGATAGT+CGG | + | chr5_4:56284249-56284268 | Msa0858670:intron | 25.0% |
! | TCTTTCAAATTGGTTATAGA+GGG | - | chr5_4:56284288-56284307 | None:intergenic | 25.0% |
! | TTCTTTCAAATTGGTTATAG+AGG | - | chr5_4:56284289-56284308 | None:intergenic | 25.0% |
! | GAATCAAACTTCTTTCAAAT+TGG | - | chr5_4:56284298-56284317 | None:intergenic | 25.0% |
! | TTTGAAAGAAGTTTGATTCT+TGG | + | chr5_4:56284299-56284318 | Msa0858670:intron | 25.0% |
! | TTTCTTTAACAGCCTAATAA+TGG | - | chr5_4:56284669-56284688 | None:intergenic | 25.0% |
! | ATGGCTAAATAAAACATACA+TGG | - | chr5_4:56284962-56284981 | None:intergenic | 25.0% |
!! | GATCTAAAATCTAAACTACA+AGG | - | chr5_4:56284995-56285014 | None:intergenic | 25.0% |
! | CTTTCATATTCGTTAAGTAT+TGG | + | chr5_4:56285051-56285070 | Msa0858670:intron | 25.0% |
!! | TTAGATTTTTGATACCTAAG+AGG | + | chr5_4:56285235-56285254 | Msa0858670:intron | 25.0% |
!!! | ATATTTTGAAAGTTCCTCTT+AGG | - | chr5_4:56285252-56285271 | None:intergenic | 25.0% |
! | TGAAGTTCTTAGCTATATTA+AGG | - | chr5_4:56285473-56285492 | None:intergenic | 25.0% |
! | TAGAACAACTGAAGAAATTA+AGG | + | chr5_4:56285932-56285951 | Msa0858670:CDS | 25.0% |
! | AAAAATGGAGATTTGTCTTT+CGG | - | chr5_4:56286218-56286237 | None:intergenic | 25.0% |
! | GTCTAGAAACTTCTTAAAAA+TGG | - | chr5_4:56286233-56286252 | None:intergenic | 25.0% |
!! | TTTTTCATGTATAAGGTAAG+TGG | + | chr5_4:56286258-56286277 | Msa0858670:intron | 25.0% |
!! | GTTCCTTTTTATTATAACTG+AGG | + | chr5_4:56286294-56286313 | Msa0858670:intron | 25.0% |
! | AATAATTTATGGACTTCCAT+TGG | - | chr5_4:56286321-56286340 | None:intergenic | 25.0% |
!! | CGAGAACTTTTATCATTAAA+GGG | - | chr5_4:56286409-56286428 | None:intergenic | 25.0% |
!! | ACGAGAACTTTTATCATTAA+AGG | - | chr5_4:56286410-56286429 | None:intergenic | 25.0% |
! | AATAATTATTGAAACTTGGC+TGG | + | chr5_4:56286545-56286564 | Msa0858670:intron | 25.0% |
!!! | TTTTGAAGTTTGCTTCTTCT+GGG | - | chr5_4:56271967-56271986 | None:intergenic | 30.0% |
!!! | TTTTTGAAGTTTGCTTCTTC+TGG | - | chr5_4:56271968-56271987 | None:intergenic | 30.0% |
!! | ATTGATGATGATGAAGAAGA+TGG | - | chr5_4:56272024-56272043 | None:intergenic | 30.0% |
!! | CGAATTCTGAAAATTTTGTG+CGG | + | chr5_4:56272253-56272272 | Msa0858670:intron | 30.0% |
! | AAGAATGAGATTGATGCTTT+TGG | + | chr5_4:56272766-56272785 | Msa0858670:intron | 30.0% |
!! | ATGAGATTGATAGTGTCTTT+AGG | + | chr5_4:56272965-56272984 | Msa0858670:intron | 30.0% |
!! | GATGGTAGGATAAAAGTATT+TGG | + | chr5_4:56273021-56273040 | Msa0858670:CDS | 30.0% |
AACATTCTTCAAGCATTTAG+AGG | + | chr5_4:56273083-56273102 | Msa0858670:CDS | 30.0% | |
AGTTCAATAAATGTGTGCTT+TGG | - | chr5_4:56273300-56273319 | None:intergenic | 30.0% | |
TACATCTTTCTTACAGTTCT+TGG | + | chr5_4:56273374-56273393 | Msa0858670:intron | 30.0% | |
TTACAGTTCTTGGAAAATCA+AGG | + | chr5_4:56273384-56273403 | Msa0858670:intron | 30.0% | |
AAGCTGATGAACACAAAAAA+GGG | - | chr5_4:56273524-56273543 | None:intergenic | 30.0% | |
AAAGCTGATGAACACAAAAA+AGG | - | chr5_4:56273525-56273544 | None:intergenic | 30.0% | |
CTGCTTAATAAATGAAACAG+AGG | - | chr5_4:56273619-56273638 | None:intergenic | 30.0% | |
!! | AACATGTTTATGATAATGGC+AGG | + | chr5_4:56273642-56273661 | Msa0858670:intron | 30.0% |
!! | TTTATGATAATGGCAGGTTT+GGG | + | chr5_4:56273648-56273667 | Msa0858670:intron | 30.0% |
AACAGAGAAAGAAGTTATGA+TGG | - | chr5_4:56273716-56273735 | None:intergenic | 30.0% | |
GTTCCAACAAATGTTATATC+GGG | + | chr5_4:56273945-56273964 | Msa0858670:CDS | 30.0% | |
TTACCCGATATAACATTTGT+TGG | - | chr5_4:56273951-56273970 | None:intergenic | 30.0% | |
!! | TATATATTTGAGTTGGAACC+AGG | + | chr5_4:56273993-56274012 | Msa0858670:intron | 30.0% |
! | TGAGGCTATTTCAAAATTTG+TGG | - | chr5_4:56274180-56274199 | None:intergenic | 30.0% |
TTCTCTAATCTACAAACATG+AGG | - | chr5_4:56274198-56274217 | None:intergenic | 30.0% | |
! | TTTGTAGATTAGAGAAGTGT+AGG | + | chr5_4:56274202-56274221 | Msa0858670:intron | 30.0% |
! | TATGTAAAAGTGCACATTAG+GGG | + | chr5_4:56274317-56274336 | Msa0858670:intron | 30.0% |
ATAGTTATATTCCAAGCAAG+TGG | - | chr5_4:56274405-56274424 | None:intergenic | 30.0% | |
TCAATGAGATAGTATAGTAG+TGG | - | chr5_4:56274494-56274513 | None:intergenic | 30.0% | |
!!! | TTTTGATGGTTTGGTCAAAA+AGG | + | chr5_4:56274522-56274541 | Msa0858670:intron | 30.0% |
! | TCCACAACATTTTATGATGT+TGG | + | chr5_4:56274609-56274628 | Msa0858670:intron | 30.0% |
TCCAACATCATAAAATGTTG+TGG | - | chr5_4:56274613-56274632 | None:intergenic | 30.0% | |
TTTATCATCGCAAAACCAAA+CGG | - | chr5_4:56274681-56274700 | None:intergenic | 30.0% | |
GATGCTTCACTCTATATATA+AGG | + | chr5_4:56274786-56274805 | Msa0858670:intron | 30.0% | |
ACTCTATATATAAGGAGGAT+AGG | + | chr5_4:56274794-56274813 | Msa0858670:intron | 30.0% | |
AAATATGCACCATAGAATAC+AGG | - | chr5_4:56274850-56274869 | None:intergenic | 30.0% | |
! | TTTAACTTCCATGTAGCTAT+GGG | - | chr5_4:56274937-56274956 | None:intergenic | 30.0% |
! | ATTTAACTTCCATGTAGCTA+TGG | - | chr5_4:56274938-56274957 | None:intergenic | 30.0% |
TAAATCAAACCAAAGCTAAC+TGG | + | chr5_4:56274953-56274972 | Msa0858670:intron | 30.0% | |
ATATTTCGCTTATCCAAATC+CGG | - | chr5_4:56274987-56275006 | None:intergenic | 30.0% | |
! | TTTAACTTCCATGTAGCTAT+GGG | - | chr5_4:56274937-56274956 | None:intergenic | 30.0% |
! | ATTTAACTTCCATGTAGCTA+TGG | - | chr5_4:56274938-56274957 | None:intergenic | 30.0% |
GTGACTTACAGTCTAATTAT+AGG | + | chr5_4:56275139-56275158 | Msa0858670:intron | 30.0% | |
AAATCGGAAGTAATTCGTAA+CGG | - | chr5_4:56275236-56275255 | None:intergenic | 30.0% | |
! | GTCTAGTTTGAATAACTAAG+AGG | + | chr5_4:56275311-56275330 | Msa0858670:intron | 30.0% |
ATCAAGCAACGGATATATTA+TGG | + | chr5_4:56275358-56275377 | Msa0858670:intron | 30.0% | |
! | GGTTTAATTTAGGAGTTAAC+TGG | - | chr5_4:56275434-56275453 | None:intergenic | 30.0% |
TGTAGGAACTTACACATTTA+TGG | - | chr5_4:56275738-56275757 | None:intergenic | 30.0% | |
ATATGGCACATTTATCTTGT+AGG | - | chr5_4:56275755-56275774 | None:intergenic | 30.0% | |
GGAAATTGACAATATGCATA+TGG | - | chr5_4:56275772-56275791 | None:intergenic | 30.0% | |
TATATGAAGAAACTTACGCA+TGG | + | chr5_4:56275993-56276012 | Msa0858670:intron | 30.0% | |
!!! | GTTAATTTTTTGGATCTCCA+TGG | + | chr5_4:56276022-56276041 | Msa0858670:intron | 30.0% |
!!! | AATATTTTAGCCATGTTTGC+AGG | + | chr5_4:56276107-56276126 | Msa0858670:intron | 30.0% |
! | CAGGTTGAATAGGTTATAAA+TGG | + | chr5_4:56276126-56276145 | Msa0858670:intron | 30.0% |
! | TTATAAATGGCTTTGCCTAA+GGG | + | chr5_4:56276139-56276158 | Msa0858670:intron | 30.0% |
! | ACTTTTTACCAAAACTTAGG+GGG | - | chr5_4:56276252-56276271 | None:intergenic | 30.0% |
CAGAGATAGTTAAATTTGGT+AGG | - | chr5_4:56276281-56276300 | None:intergenic | 30.0% | |
CTACCAAATTTAACTATCTC+TGG | + | chr5_4:56276279-56276298 | Msa0858670:intron | 30.0% | |
! | CAAGTCAAATTTAAGTGTTG+AGG | - | chr5_4:56276329-56276348 | None:intergenic | 30.0% |
!! | TTTTGGGTAGAAAAATGTGA+CGG | + | chr5_4:56276874-56276893 | Msa0858670:intron | 30.0% |
TGAAAATACATGGACTTGAT+TGG | + | chr5_4:56276918-56276937 | Msa0858670:intron | 30.0% | |
GAAAATACATGGACTTGATT+GGG | + | chr5_4:56276919-56276938 | Msa0858670:intron | 30.0% | |
AAAATACATGGACTTGATTG+GGG | + | chr5_4:56276920-56276939 | Msa0858670:intron | 30.0% | |
! | GAAACCAGACTTTTAGATTT+AGG | + | chr5_4:56277343-56277362 | Msa0858670:intron | 30.0% |
TGGACAGTCGAAATATAAAA+TGG | + | chr5_4:56277368-56277387 | Msa0858670:intron | 30.0% | |
!! | GTTAAATGGGTTAACATACA+GGG | + | chr5_4:56277390-56277409 | Msa0858670:intron | 30.0% |
AAATATCACAACCTAACAAG+GGG | - | chr5_4:56277497-56277516 | None:intergenic | 30.0% | |
CAAATATCACAACCTAACAA+GGG | - | chr5_4:56277498-56277517 | None:intergenic | 30.0% | |
ACAAATATCACAACCTAACA+AGG | - | chr5_4:56277499-56277518 | None:intergenic | 30.0% | |
ATTTGTCTTAGAATTTCGGT+TGG | + | chr5_4:56277513-56277532 | Msa0858670:intron | 30.0% | |
TTTGTCTTAGAATTTCGGTT+GGG | + | chr5_4:56277514-56277533 | Msa0858670:intron | 30.0% | |
TCACGGTTTGAAAATTTGAT+TGG | + | chr5_4:56277795-56277814 | Msa0858670:intron | 30.0% | |
ATTGGATGGTTTAATTCACA+TGG | - | chr5_4:56277911-56277930 | None:intergenic | 30.0% | |
! | AAAATAGACATTGGATTGGA+TGG | - | chr5_4:56277925-56277944 | None:intergenic | 30.0% |
ATAGGAAACAAAGTAACAAC+AGG | + | chr5_4:56278204-56278223 | Msa0858670:intron | 30.0% | |
AGCTCTTTGTATAATATGTG+CGG | + | chr5_4:56278285-56278304 | Msa0858670:intron | 30.0% | |
AAAACATTGAATAGAAGTGG+AGG | + | chr5_4:56278734-56278753 | Msa0858670:CDS | 30.0% | |
TGGCTCTCATTATTATGTTA+TGG | - | chr5_4:56278901-56278920 | None:intergenic | 30.0% | |
TCATAAAATATTGCCACAAC+AGG | + | chr5_4:56278934-56278953 | Msa0858670:intron | 30.0% | |
AAGAGGAAATTTAGATGAAG+TGG | + | chr5_4:56278974-56278993 | Msa0858670:intron | 30.0% | |
! | TGTGAAAATTTTGTGTAAGG+TGG | + | chr5_4:56279046-56279065 | Msa0858670:intron | 30.0% |
!!! | TTAGAAAAGTTTTTTCCTGG+AGG | + | chr5_4:56279079-56279098 | Msa0858670:intron | 30.0% |
AGTTCTGTAGAATCAGTATT+TGG | + | chr5_4:56279135-56279154 | Msa0858670:intron | 30.0% | |
! | GTACTTCATTTTCATTCTCT+TGG | + | chr5_4:56279161-56279180 | Msa0858670:intron | 30.0% |
TTGACTGTGTTATATACACT+AGG | + | chr5_4:56279188-56279207 | Msa0858670:intron | 30.0% | |
!!! | ATGTTGTATTTTGACTTGTG+AGG | + | chr5_4:56279239-56279258 | Msa0858670:intron | 30.0% |
! | CTATTTGTATTGACGAATCT+TGG | + | chr5_4:56279648-56279667 | Msa0858670:CDS | 30.0% |
AAAAGTAAGAACAGTGCTTA+TGG | - | chr5_4:56279970-56279989 | None:intergenic | 30.0% | |
!!! | GGGTGTTTTTTCAAAATTGT+TGG | + | chr5_4:56280026-56280045 | Msa0858670:intron | 30.0% |
!! | AATCAAAGGCCATTTTATCT+CGG | - | chr5_4:56280238-56280257 | None:intergenic | 30.0% |
TTATAAACAAGTGACAAAGC+AGG | - | chr5_4:56280363-56280382 | None:intergenic | 30.0% | |
TGTTTATAACATAAATCCCG+AGG | + | chr5_4:56280374-56280393 | Msa0858670:CDS | 30.0% | |
GCAGGTAAATGATGTTAAAA+TGG | + | chr5_4:56280540-56280559 | Msa0858670:intron | 30.0% | |
CATTCTCTTCTCATTTAAGA+AGG | + | chr5_4:56280675-56280694 | Msa0858670:intron | 30.0% | |
! | TTTAACCAATGAGAGTATGT+AGG | + | chr5_4:56280705-56280724 | Msa0858670:intron | 30.0% |
AAGAAACAAAACTCTACCTT+CGG | - | chr5_4:56280797-56280816 | None:intergenic | 30.0% | |
TCAATTAATGATTGATGTGG+GGG | + | chr5_4:56280968-56280987 | Msa0858670:intron | 30.0% | |
! | CGTTTCAAAAATTTAGGATG+AGG | - | chr5_4:56281033-56281052 | None:intergenic | 30.0% |
CAACTTTGCAGAAATATTTG+TGG | + | chr5_4:56281133-56281152 | Msa0858670:intron | 30.0% | |
CATAATCTACCAAATGTACA+AGG | - | chr5_4:56281182-56281201 | None:intergenic | 30.0% | |
CTTGTACATTTGGTAGATTA+TGG | + | chr5_4:56281180-56281199 | Msa0858670:intron | 30.0% | |
AAATAAACCTATGACGTGAT+AGG | - | chr5_4:56281260-56281279 | None:intergenic | 30.0% | |
AGTTAGACCAAATTTCAACA+TGG | - | chr5_4:56281301-56281320 | None:intergenic | 30.0% | |
AAATATTGGATGATAGGCTT+GGG | - | chr5_4:56281484-56281503 | None:intergenic | 30.0% | |
AAAATATTGGATGATAGGCT+TGG | - | chr5_4:56281485-56281504 | None:intergenic | 30.0% | |
CACAGAAAATATTGGATGAT+AGG | - | chr5_4:56281490-56281509 | None:intergenic | 30.0% | |
AAGTGATCTACAATCATCAT+AGG | + | chr5_4:56281603-56281622 | Msa0858670:intron | 30.0% | |
CTGTCTCATAACATAATTAC+AGG | - | chr5_4:56281726-56281745 | None:intergenic | 30.0% | |
ACAGTTCATAATGTGAATCA+AGG | + | chr5_4:56281742-56281761 | Msa0858670:intron | 30.0% | |
CAGTTCATAATGTGAATCAA+GGG | + | chr5_4:56281743-56281762 | Msa0858670:intron | 30.0% | |
AGTTCATAATGTGAATCAAG+GGG | + | chr5_4:56281744-56281763 | Msa0858670:intron | 30.0% | |
! | ACATACAGCAGAATTTTGAA+GGG | - | chr5_4:56281797-56281816 | None:intergenic | 30.0% |
TTCAAAATTCTGCTGTATGT+GGG | + | chr5_4:56281797-56281816 | Msa0858670:CDS | 30.0% | |
TTGTAGTTGGATATGAACAT+GGG | + | chr5_4:56281848-56281867 | Msa0858670:CDS | 30.0% | |
!! | TCGAAAAGAAAAGGTGTTAA+TGG | - | chr5_4:56281887-56281906 | None:intergenic | 30.0% |
!!! | TTGTTTTTCGAGTTGTTGAA+TGG | + | chr5_4:56281924-56281943 | Msa0858670:intron | 30.0% |
! | CTCAAAGTACGAATTTTCAA+TGG | - | chr5_4:56282481-56282500 | None:intergenic | 30.0% |
! | CTCTTTGAATTTTGTGATTG+AGG | + | chr5_4:56282557-56282576 | Msa0858670:CDS | 30.0% |
TAATCAAATTGCCTTACTAC+AGG | + | chr5_4:56282635-56282654 | Msa0858670:intron | 30.0% | |
AATCAAATTGCCTTACTACA+GGG | + | chr5_4:56282636-56282655 | Msa0858670:intron | 30.0% | |
TAGCAATAAGTACATAAGGA+AGG | + | chr5_4:56282659-56282678 | Msa0858670:CDS | 30.0% | |
! | CACATTCTTTGTCATCTTTT+CGG | - | chr5_4:56282722-56282741 | None:intergenic | 30.0% |
TTAATTCAATGTCTCCAGTT+TGG | - | chr5_4:56282761-56282780 | None:intergenic | 30.0% | |
AAACTGGAGACATTGAATTA+AGG | + | chr5_4:56282760-56282779 | Msa0858670:CDS | 30.0% | |
TTGCGATGGATACATAAAAA+GGG | + | chr5_4:56282888-56282907 | Msa0858670:intron | 30.0% | |
GGATACATAAAAAGGGAATA+TGG | + | chr5_4:56282895-56282914 | Msa0858670:intron | 30.0% | |
!! | GCACATTATAGGAAAGTATT+TGG | + | chr5_4:56282974-56282993 | Msa0858670:intron | 30.0% |
!! | ATAGGAAAGTATTTGGATCA+AGG | + | chr5_4:56282981-56283000 | Msa0858670:intron | 30.0% |
! | TCTCTTTAGAAGAATGATTC+TGG | + | chr5_4:56283029-56283048 | Msa0858670:intron | 30.0% |
AAATACACAAGTCAAAGTTG+AGG | + | chr5_4:56283076-56283095 | Msa0858670:intron | 30.0% | |
TTTACTTTATTATGAGAGGG+AGG | + | chr5_4:56283154-56283173 | Msa0858670:intron | 30.0% | |
!! | TGCTTTACTTTTGATATCAG+GGG | - | chr5_4:56283214-56283233 | None:intergenic | 30.0% |
!! | TAATAATCAAACTCTGAGAC+AGG | + | chr5_4:56283359-56283378 | Msa0858670:intron | 30.0% |
ACTGTGATTTAATATTGGGA+AGG | - | chr5_4:56283482-56283501 | None:intergenic | 30.0% | |
CCAAGACTGTGATTTAATAT+TGG | - | chr5_4:56283487-56283506 | None:intergenic | 30.0% | |
CCAATATTAAATCACAGTCT+TGG | + | chr5_4:56283484-56283503 | Msa0858670:intron | 30.0% | |
!! | TCATACTAGCTTTGACATTA+TGG | + | chr5_4:56283627-56283646 | Msa0858670:intron | 30.0% |
GCATGATTAACTGTTCAAAA+AGG | - | chr5_4:56284001-56284020 | None:intergenic | 30.0% | |
! | TTTTGAACAGTTAATCATGC+AGG | + | chr5_4:56284001-56284020 | Msa0858670:intron | 30.0% |
CAGAAGGAAAGAGATTAAAA+TGG | - | chr5_4:56284076-56284095 | None:intergenic | 30.0% | |
GAAAGAATATCAGATACAGA+AGG | - | chr5_4:56284092-56284111 | None:intergenic | 30.0% | |
! | TTCTGTTTCAAATTTTGTCC+TGG | - | chr5_4:56284159-56284178 | None:intergenic | 30.0% |
TGCATGAAATTATCCTCATT+AGG | + | chr5_4:56284194-56284213 | Msa0858670:intron | 30.0% | |
CTTTCAAATTGGTTATAGAG+GGG | - | chr5_4:56284287-56284306 | None:intergenic | 30.0% | |
CTAGATTTAAAGATTAGGCA+GGG | + | chr5_4:56284352-56284371 | Msa0858670:intron | 30.0% | |
!!! | AGCTTCATAGTGGTTTTAAT+GGG | - | chr5_4:56284555-56284574 | None:intergenic | 30.0% |
!!! | AAGCTTCATAGTGGTTTTAA+TGG | - | chr5_4:56284556-56284575 | None:intergenic | 30.0% |
TTAAAACCACTATGAAGCTT+TGG | + | chr5_4:56284556-56284575 | Msa0858670:intron | 30.0% | |
AAAAGGTCAGATCCATTATT+AGG | + | chr5_4:56284654-56284673 | Msa0858670:intron | 30.0% | |
! | AGTTTTCAGTTGAAATGCTA+AGG | - | chr5_4:56284744-56284763 | None:intergenic | 30.0% |
TTAGCATTTCAACTGAAAAC+TGG | + | chr5_4:56284743-56284762 | Msa0858670:intron | 30.0% | |
AGAACATGAAGAGTTATTCA+TGG | - | chr5_4:56284789-56284808 | None:intergenic | 30.0% | |
! | AGCTAATTTCCAATAGCTTT+TGG | + | chr5_4:56284817-56284836 | Msa0858670:intron | 30.0% |
!!! | TGGTTTTATAATCATACCTG+TGG | + | chr5_4:56284837-56284856 | Msa0858670:intron | 30.0% |
ACTACAAGGTTAAGATTTGA+TGG | - | chr5_4:56284981-56285000 | None:intergenic | 30.0% | |
TTGTCATAAGTTGTGTTATG+TGG | - | chr5_4:56285088-56285107 | None:intergenic | 30.0% | |
AGGAACTTTCAAAATATTGC+AGG | + | chr5_4:56285255-56285274 | Msa0858670:intron | 30.0% | |
!!! | TTTGATTTTGGTTTGGAGTT+AGG | - | chr5_4:56285346-56285365 | None:intergenic | 30.0% |
TCCAAACCAAAATCAAAAAC+AGG | + | chr5_4:56285349-56285368 | Msa0858670:CDS | 30.0% | |
!!! | ACCTGTTTTTGATTTTGGTT+TGG | - | chr5_4:56285353-56285372 | None:intergenic | 30.0% |
!!! | ACTGTACCTGTTTTTGATTT+TGG | - | chr5_4:56285358-56285377 | None:intergenic | 30.0% |
CGGATCCTGAAAAAATAAAT+GGG | - | chr5_4:56285410-56285429 | None:intergenic | 30.0% | |
ACGGATCCTGAAAAAATAAA+TGG | - | chr5_4:56285411-56285430 | None:intergenic | 30.0% | |
GCTATATTAAGGAAGATAGA+AGG | - | chr5_4:56285462-56285481 | None:intergenic | 30.0% | |
AATTCAAATTGATGAGCCTA+TGG | + | chr5_4:56285729-56285748 | Msa0858670:CDS | 30.0% | |
AAGGCTAAATATAGAAAGAC+TGG | + | chr5_4:56285951-56285970 | Msa0858670:CDS | 30.0% | |
AGGCTAAATATAGAAAGACT+GGG | + | chr5_4:56285952-56285971 | Msa0858670:CDS | 30.0% | |
AATAGAATAACAGTCTAACC+TGG | - | chr5_4:56286112-56286131 | None:intergenic | 30.0% | |
TATTGTGGAAGGATAAGATT+CGG | - | chr5_4:56286149-56286168 | None:intergenic | 30.0% | |
TCATTAAATAGTAGGAGATG+AGG | - | chr5_4:56286177-56286196 | None:intergenic | 30.0% | |
GGACCTCAGTTATAATAAAA+AGG | - | chr5_4:56286300-56286319 | None:intergenic | 30.0% | |
TTATTATAACTGAGGTCCAA+TGG | + | chr5_4:56286302-56286321 | Msa0858670:intron | 30.0% | |
!!! | CTGGTCAATTTTTGGTTATT+TGG | - | chr5_4:56286475-56286494 | None:intergenic | 30.0% |
! | CTACTTTGATTTCACAAAGT+GGG | - | chr5_4:56286502-56286521 | None:intergenic | 30.0% |
! | ACTACTTTGATTTCACAAAG+TGG | - | chr5_4:56286503-56286522 | None:intergenic | 30.0% |
GACAGAATTTCAACTTCTAA+AGG | - | chr5_4:56286783-56286802 | None:intergenic | 30.0% | |
!!! | TTAGCCTCACTTGTTTTTAA+AGG | + | chr5_4:56286809-56286828 | Msa0858670:three_prime_UTR | 30.0% |
TCTGATTCATTTGCTTCTTT+AGG | + | chr5_4:56286836-56286855 | Msa0858670:three_prime_UTR | 30.0% | |
TTTCTGTTTCGTTGAACTTC+AGG | - | chr5_4:56271914-56271933 | None:intergenic | 35.0% | |
TTTCTTCACTCTTGTAGTGA+TGG | + | chr5_4:56273003-56273022 | Msa0858670:intron | 35.0% | |
!! | GGTAGGATAAAAGTATTTGG+TGG | + | chr5_4:56273024-56273043 | Msa0858670:CDS | 35.0% |
!! | TTTGGTGGTGAGAATATTGA+AGG | + | chr5_4:56273039-56273058 | Msa0858670:CDS | 35.0% |
!! | TTGGTGGTGAGAATATTGAA+GGG | + | chr5_4:56273040-56273059 | Msa0858670:CDS | 35.0% |
TGCTTGAAGAATGTTTGCTT+AGG | - | chr5_4:56273078-56273097 | None:intergenic | 35.0% | |
TGCATATCACGACATAAACA+TGG | - | chr5_4:56273235-56273254 | None:intergenic | 35.0% | |
TATGTCGTGATATGCATATG+TGG | + | chr5_4:56273239-56273258 | Msa0858670:intron | 35.0% | |
CTTCTAAACTTTCTATGACC+AGG | + | chr5_4:56273468-56273487 | Msa0858670:intron | 35.0% | |
!! | GTTTATGATAATGGCAGGTT+TGG | + | chr5_4:56273647-56273666 | Msa0858670:intron | 35.0% |
TGAAAGAGTAGATTGTGATG+CGG | - | chr5_4:56273788-56273807 | None:intergenic | 35.0% | |
! | GAAGCTACAACATTTTTGTC+CGG | + | chr5_4:56273826-56273845 | Msa0858670:intron | 35.0% |
!!! | ACCAGGATTTTTTTTTGCAC+TGG | + | chr5_4:56274010-56274029 | Msa0858670:intron | 35.0% |
!!! | TTTTTTTGCACTGGCCAAAA+TGG | + | chr5_4:56274019-56274038 | Msa0858670:intron | 35.0% |
! | GCTTATTAAACCAGCCATTT+TGG | - | chr5_4:56274036-56274055 | None:intergenic | 35.0% |
!!! | CTTTTGTTTGAGTTTGGTGT+GGG | + | chr5_4:56274068-56274087 | Msa0858670:intron | 35.0% |
!!! | TTTTGTTTGAGTTTGGTGTG+GGG | + | chr5_4:56274069-56274088 | Msa0858670:intron | 35.0% |
AAGTTCAATAACCACTTGCT+TGG | + | chr5_4:56274391-56274410 | Msa0858670:intron | 35.0% | |
! | GTCAAAAAGGCTTTGATAAC+AGG | + | chr5_4:56274535-56274554 | Msa0858670:intron | 35.0% |
! | ATACCAGCCCTAATACTTTT+TGG | - | chr5_4:56274578-56274597 | None:intergenic | 35.0% |
GGATTAGATTAAGTAAGGGT+TGG | + | chr5_4:56274630-56274649 | Msa0858670:intron | 35.0% | |
TTATCATCGCAAAACCAAAC+GGG | - | chr5_4:56274680-56274699 | None:intergenic | 35.0% | |
GCTTCACTCTATATATAAGG+AGG | + | chr5_4:56274789-56274808 | Msa0858670:intron | 35.0% | |
GAGTTGTGAAGGATGTTTAA+CGG | + | chr5_4:56274819-56274838 | Msa0858670:intron | 35.0% | |
AGATTTCGCTTATCCAAATC+CGG | - | chr5_4:56275083-56275102 | None:intergenic | 35.0% | |
! | GAAGTAATTCGTAACGGAAA+AGG | - | chr5_4:56275230-56275249 | None:intergenic | 35.0% |
! | GAATTACTTCCGATTTGAAC+CGG | + | chr5_4:56275240-56275259 | Msa0858670:intron | 35.0% |
ACCTTCTCAGAAGAAATGTT+TGG | + | chr5_4:56275284-56275303 | Msa0858670:intron | 35.0% | |
CCTTCTCAGAAGAAATGTTT+GGG | + | chr5_4:56275285-56275304 | Msa0858670:intron | 35.0% | |
! | AGAAACTTACGCATGGATTT+TGG | + | chr5_4:56276000-56276019 | Msa0858670:intron | 35.0% |
GTCATGAATATGCTTCTCTT+TGG | + | chr5_4:56276061-56276080 | Msa0858670:intron | 35.0% | |
! | GTTATAAATGGCTTTGCCTA+AGG | + | chr5_4:56276138-56276157 | Msa0858670:intron | 35.0% |
! | TTTTTACCAAAACTTAGGGG+GGG | - | chr5_4:56276250-56276269 | None:intergenic | 35.0% |
! | CTTTTTACCAAAACTTAGGG+GGG | - | chr5_4:56276251-56276270 | None:intergenic | 35.0% |
CAGCCAGAGATAGTTAAATT+TGG | - | chr5_4:56276285-56276304 | None:intergenic | 35.0% | |
!!! | GAGGCTTTCATTTGCTTTTT+AGG | - | chr5_4:56276310-56276329 | None:intergenic | 35.0% |
ATGTGACAACAGGACTTAAT+TGG | - | chr5_4:56276563-56276582 | None:intergenic | 35.0% | |
AGTAGAAGAAATGTGACAAC+AGG | - | chr5_4:56276573-56276592 | None:intergenic | 35.0% | |
! | ATTGGTGAATTTTGAGCAGA+AGG | - | chr5_4:56276653-56276672 | None:intergenic | 35.0% |
GCAAATTTAAGGAACTGTGA+AGG | - | chr5_4:56276757-56276776 | None:intergenic | 35.0% | |
!! | ACTATGATCGGTTTGAGATA+AGG | - | chr5_4:56276818-56276837 | None:intergenic | 35.0% |
TTAAACAAAACTAGAGGGAC+CGG | + | chr5_4:56276944-56276963 | Msa0858670:intron | 35.0% | |
ATCTTGATCATATGCTATGC+CGG | - | chr5_4:56276966-56276985 | None:intergenic | 35.0% | |
TAATTTAATTGAGGGCAACC+CGG | + | chr5_4:56277140-56277159 | Msa0858670:intron | 35.0% | |
TAAAGTTGTTGTCATGTGAC+TGG | - | chr5_4:56277287-56277306 | None:intergenic | 35.0% | |
TTAAATTAGAGGGGTAACCT+TGG | - | chr5_4:56277319-56277338 | None:intergenic | 35.0% | |
CAACCCTAAATCTAAAAGTC+TGG | - | chr5_4:56277350-56277369 | None:intergenic | 35.0% | |
!! | CAGACTTTTAGATTTAGGGT+TGG | + | chr5_4:56277348-56277367 | Msa0858670:intron | 35.0% |
!! | GGTTAAATGGGTTAACATAC+AGG | + | chr5_4:56277389-56277408 | Msa0858670:intron | 35.0% |
AACAGTACGACTAAAAGTCT+GGG | - | chr5_4:56277456-56277475 | None:intergenic | 35.0% | |
TAACAGTACGACTAAAAGTC+TGG | - | chr5_4:56277457-56277476 | None:intergenic | 35.0% | |
GTACTGTTAGAAAGCAGATT+TGG | + | chr5_4:56277468-56277487 | Msa0858670:intron | 35.0% | |
AATTGTCAAGAGTCCCAAAT+TGG | - | chr5_4:56277622-56277641 | None:intergenic | 35.0% | |
GTAGCATGTCAACAATCTAA+GGG | - | chr5_4:56277889-56277908 | None:intergenic | 35.0% | |
! | ATCATCATTTTGCAGACTGT+TGG | + | chr5_4:56278337-56278356 | Msa0858670:intron | 35.0% |
AAGATCAGATAGTTCTCATC+AGG | + | chr5_4:56278402-56278421 | Msa0858670:CDS | 35.0% | |
AGATCAGATAGTTCTCATCA+GGG | + | chr5_4:56278403-56278422 | Msa0858670:CDS | 35.0% | |
CGAATTGAAGAGAAAGATAG+TGG | + | chr5_4:56278439-56278458 | Msa0858670:CDS | 35.0% | |
! | AAGATAGTGGCTAGTTATTC+AGG | + | chr5_4:56278452-56278471 | Msa0858670:CDS | 35.0% |
TCATCAGAATGTTCATTCGT+AGG | - | chr5_4:56278482-56278501 | None:intergenic | 35.0% | |
AGAACACGAAGAAGAAGATA+AGG | + | chr5_4:56278508-56278527 | Msa0858670:CDS | 35.0% | |
AGGAAATAAGCTCTGTATCT+TGG | + | chr5_4:56278528-56278547 | Msa0858670:CDS | 35.0% | |
GGAAATAAGCTCTGTATCTT+GGG | + | chr5_4:56278529-56278548 | Msa0858670:CDS | 35.0% | |
AGTTATCATCAGCAGATAGA+AGG | + | chr5_4:56278678-56278697 | Msa0858670:CDS | 35.0% | |
ACCAGTGTAGGAGAATAATA+GGG | - | chr5_4:56278706-56278725 | None:intergenic | 35.0% | |
TCTATGGTGGCAATGAAATT+GGG | + | chr5_4:56278768-56278787 | Msa0858670:CDS | 35.0% | |
CAAAACATCAGTATGACATG+AGG | - | chr5_4:56278877-56278896 | None:intergenic | 35.0% | |
! | CTCATGTCATACTGATGTTT+TGG | + | chr5_4:56278875-56278894 | Msa0858670:intron | 35.0% |
CCTCTTAAACATTCAGAAGA+TGG | - | chr5_4:56278960-56278979 | None:intergenic | 35.0% | |
CCATCTTCTGAATGTTTAAG+AGG | + | chr5_4:56278957-56278976 | Msa0858670:intron | 35.0% | |
TGATTCTACAGAACTCATCT+AGG | - | chr5_4:56279130-56279149 | None:intergenic | 35.0% | |
TACAACATCATTTGGATGAC+AGG | - | chr5_4:56279227-56279246 | None:intergenic | 35.0% | |
AATTACAGTGTCAATGGTCT+TGG | + | chr5_4:56279413-56279432 | Msa0858670:intron | 35.0% | |
! | AGTTTTCATTACGTCAACTC+AGG | + | chr5_4:56279438-56279457 | Msa0858670:intron | 35.0% |
AAAGCTCAAAACCTGTAAAC+AGG | - | chr5_4:56279505-56279524 | None:intergenic | 35.0% | |
ATAGAAAGTCTCAAGTGTAC+TGG | + | chr5_4:56279540-56279559 | Msa0858670:CDS | 35.0% | |
ATGATGGCATATTGCATTGT+GGG | - | chr5_4:56279744-56279763 | None:intergenic | 35.0% | |
CTGTAAATGACTTCACATCT+TGG | - | chr5_4:56279818-56279837 | None:intergenic | 35.0% | |
!!! | CAAGATTTTTTCCCCCTTAT+GGG | + | chr5_4:56279885-56279904 | Msa0858670:intron | 35.0% |
TGCAAAAGTAACACCCATAA+GGG | - | chr5_4:56279901-56279920 | None:intergenic | 35.0% | |
ATGCAAAAGTAACACCCATA+AGG | - | chr5_4:56279902-56279921 | None:intergenic | 35.0% | |
! | ATGGTACTGCATCTAAGATT+CGG | - | chr5_4:56279951-56279970 | None:intergenic | 35.0% |
AGAAAAACTATCTCTGTGAG+AGG | - | chr5_4:56279993-56280012 | None:intergenic | 35.0% | |
! | AAACTTAGGTAGAGTGCTAT+AGG | - | chr5_4:56280096-56280115 | None:intergenic | 35.0% |
TAGGTATCATTTCCCATTAG+TGG | - | chr5_4:56280164-56280183 | None:intergenic | 35.0% | |
GAGATAAAATGGCCTTTGAT+TGG | + | chr5_4:56280237-56280256 | Msa0858670:CDS | 35.0% | |
ATAAAATGGCCTTTGATTGG+TGG | + | chr5_4:56280240-56280259 | Msa0858670:CDS | 35.0% | |
!! | TCTTCTTTTAAAAGCTGACC+TGG | - | chr5_4:56280270-56280289 | None:intergenic | 35.0% |
TAGTATGATAAGGCTAACCT+CGG | - | chr5_4:56280394-56280413 | None:intergenic | 35.0% | |
CAGAGAATCAATTCGACTAT+TGG | + | chr5_4:56280518-56280537 | Msa0858670:intron | 35.0% | |
TTGCATTTCGTGACAGAAAA+TGG | + | chr5_4:56280769-56280788 | Msa0858670:CDS | 35.0% | |
!! | AAAAGGGGTGTCTCAAAATT+TGG | + | chr5_4:56280938-56280957 | Msa0858670:intron | 35.0% |
CAATTAATGATTGATGTGGG+GGG | + | chr5_4:56280969-56280988 | Msa0858670:intron | 35.0% | |
!! | AAAAATTTATGGCGGACAAG+TGG | - | chr5_4:56281111-56281130 | None:intergenic | 35.0% |
GTATAAGACCCTTGTACATT+TGG | + | chr5_4:56281170-56281189 | Msa0858670:intron | 35.0% | |
TGGTGCATTTAATATCGGAA+TGG | + | chr5_4:56281200-56281219 | Msa0858670:intron | 35.0% | |
ACTTACAAGTCAGATTTGTG+AGG | - | chr5_4:56281327-56281346 | None:intergenic | 35.0% | |
! | CAAATCTGACTTGTAAGTTG+AGG | + | chr5_4:56281329-56281348 | Msa0858670:intron | 35.0% |
GAGAAGAGTTTATAAAGAGG+AGG | - | chr5_4:56281359-56281378 | None:intergenic | 35.0% | |
AAGTCTCACATTGGAAAGAT+AGG | - | chr5_4:56281388-56281407 | None:intergenic | 35.0% | |
TATCTTTCCAATGTGAGACT+TGG | + | chr5_4:56281387-56281406 | Msa0858670:intron | 35.0% | |
ATCTTTCCAATGTGAGACTT+GGG | + | chr5_4:56281388-56281407 | Msa0858670:intron | 35.0% | |
! | TGGGTTTTCCCCAATATTAT+TGG | + | chr5_4:56281407-56281426 | Msa0858670:intron | 35.0% |
AATATTGGATGATAGGCTTG+GGG | - | chr5_4:56281483-56281502 | None:intergenic | 35.0% | |
TAAACACTTTCCCTGAGTTA+TGG | + | chr5_4:56281511-56281530 | Msa0858670:intron | 35.0% | |
AAACACTTTCCCTGAGTTAT+GGG | + | chr5_4:56281512-56281531 | Msa0858670:intron | 35.0% | |
TTATGGGAATCTAGACAAGT+GGG | + | chr5_4:56281528-56281547 | Msa0858670:intron | 35.0% | |
! | CACATACAGCAGAATTTTGA+AGG | - | chr5_4:56281798-56281817 | None:intergenic | 35.0% |
CTTCAAAATTCTGCTGTATG+TGG | + | chr5_4:56281796-56281815 | Msa0858670:CDS | 35.0% | |
TACAGTTTGCAAATCTTGGA+GGG | + | chr5_4:56281821-56281840 | Msa0858670:CDS | 35.0% | |
CTTGTAGTTGGATATGAACA+TGG | + | chr5_4:56281847-56281866 | Msa0858670:CDS | 35.0% | |
TTTCTAATCTACTTTGCAGG+TGG | + | chr5_4:56281976-56281995 | Msa0858670:intron | 35.0% | |
TGATGTAATGGTATCAAGCA+TGG | - | chr5_4:56282002-56282021 | None:intergenic | 35.0% | |
ATAGAAACTACTGCAGATGT+GGG | - | chr5_4:56282055-56282074 | None:intergenic | 35.0% | |
ATATCAGATACAGATTCCTG+TGG | - | chr5_4:56282115-56282134 | None:intergenic | 35.0% | |
! | TATTTCTGACAACTCTGCAA+AGG | + | chr5_4:56282132-56282151 | Msa0858670:CDS | 35.0% |
ATTTCTGACAACTCTGCAAA+GGG | + | chr5_4:56282133-56282152 | Msa0858670:CDS | 35.0% | |
GCTAGTGTTCATTATGACAA+GGG | + | chr5_4:56282156-56282175 | Msa0858670:CDS | 35.0% | |
TTGCGATAGATACTGAAACA+GGG | + | chr5_4:56282191-56282210 | Msa0858670:CDS | 35.0% | |
AGATACTGAAACAGGGAATA+TGG | + | chr5_4:56282198-56282217 | Msa0858670:CDS | 35.0% | |
! | CAGGGAATATGGTTTGTAAT+AGG | + | chr5_4:56282209-56282228 | Msa0858670:CDS | 35.0% |
! | TTGCATTCGAGTTTACACTT+GGG | - | chr5_4:56282243-56282262 | None:intergenic | 35.0% |
! | ATTGCATTCGAGTTTACACT+TGG | - | chr5_4:56282244-56282263 | None:intergenic | 35.0% |
GCAATTTCAATGCACATCAT+AGG | + | chr5_4:56282259-56282278 | Msa0858670:CDS | 35.0% | |
!! | GATATTTCAGAAGTACCATC+TGG | - | chr5_4:56282357-56282376 | None:intergenic | 35.0% |
AGGGTAGCAATAAGTACATA+AGG | + | chr5_4:56282655-56282674 | Msa0858670:intron | 35.0% | |
! | CCAGACACATTCTTTTACAA+GGG | - | chr5_4:56282688-56282707 | None:intergenic | 35.0% |
! | TCCAGACACATTCTTTTACA+AGG | - | chr5_4:56282689-56282708 | None:intergenic | 35.0% |
AGATGACAAAGAATGTGTTC+TGG | + | chr5_4:56282725-56282744 | Msa0858670:CDS | 35.0% | |
GTTGCGATGGATACATAAAA+AGG | + | chr5_4:56282887-56282906 | Msa0858670:intron | 35.0% | |
!! | CGACTTTCGACTTTACTTTT+GGG | - | chr5_4:56282940-56282959 | None:intergenic | 35.0% |
! | TCGACTTTCGACTTTACTTT+TGG | - | chr5_4:56282941-56282960 | None:intergenic | 35.0% |
GCAATTTCAACGCACATTAT+AGG | + | chr5_4:56282963-56282982 | Msa0858670:intron | 35.0% | |
!! | TTTACTTTTGATATCAGGGG+GGG | - | chr5_4:56283211-56283230 | None:intergenic | 35.0% |
!! | CTTTACTTTTGATATCAGGG+GGG | - | chr5_4:56283212-56283231 | None:intergenic | 35.0% |
!! | GCTTTACTTTTGATATCAGG+GGG | - | chr5_4:56283213-56283232 | None:intergenic | 35.0% |
! | CACTCTTCTTGATAAGCTTT+TGG | + | chr5_4:56283675-56283694 | Msa0858670:intron | 35.0% |
! | TCTTCTTGATAAGCTTTTGG+TGG | + | chr5_4:56283678-56283697 | Msa0858670:intron | 35.0% |
CTCTAATGTCAATCCTAAGA+TGG | + | chr5_4:56283757-56283776 | Msa0858670:CDS | 35.0% | |
!!! | TGACAGTTTTAGACCTAATG+AGG | - | chr5_4:56284210-56284229 | None:intergenic | 35.0% |
GCTAGATTTAAAGATTAGGC+AGG | + | chr5_4:56284351-56284370 | Msa0858670:intron | 35.0% | |
ATTTAAAGATTAGGCAGGGT+GGG | + | chr5_4:56284356-56284375 | Msa0858670:intron | 35.0% | |
CATAAGAATTAAGAGCCCTT+AGG | - | chr5_4:56284396-56284415 | None:intergenic | 35.0% | |
AGGGCTCTTAATTCTTATGT+AGG | + | chr5_4:56284397-56284416 | Msa0858670:intron | 35.0% | |
GGGCTCTTAATTCTTATGTA+GGG | + | chr5_4:56284398-56284417 | Msa0858670:intron | 35.0% | |
GGCTCTTAATTCTTATGTAG+GGG | + | chr5_4:56284399-56284418 | Msa0858670:intron | 35.0% | |
GCTCTTAATTCTTATGTAGG+GGG | + | chr5_4:56284400-56284419 | Msa0858670:intron | 35.0% | |
! | TAAAAGCATAAGCGGTCAAT+TGG | - | chr5_4:56284457-56284476 | None:intergenic | 35.0% |
! | AACTCTCGTAAAAGCATAAG+CGG | - | chr5_4:56284465-56284484 | None:intergenic | 35.0% |
AATAGATAAAGGGGACAACT+TGG | + | chr5_4:56284598-56284617 | Msa0858670:intron | 35.0% | |
TTCAGTTGAAATGCTAAGGA+GGG | - | chr5_4:56284740-56284759 | None:intergenic | 35.0% | |
TTTCAGTTGAAATGCTAAGG+AGG | - | chr5_4:56284741-56284760 | None:intergenic | 35.0% | |
CTATAAAAAAAGGTAGCCAC+AGG | - | chr5_4:56284856-56284875 | None:intergenic | 35.0% | |
!!! | CTGTGGCTACCTTTTTTTAT+AGG | + | chr5_4:56284854-56284873 | Msa0858670:intron | 35.0% |
AAAACATACATGGCCAGAAA+AGG | - | chr5_4:56284952-56284971 | None:intergenic | 35.0% | |
AGAACTTCATCATGAAGACA+AGG | - | chr5_4:56285296-56285315 | None:intergenic | 35.0% | |
! | AAAACAGGTACAGTTTGTTC+AGG | + | chr5_4:56285364-56285383 | Msa0858670:intron | 35.0% |
! | TGGCAACATAAGTTGAATCA+CGG | - | chr5_4:56285430-56285449 | None:intergenic | 35.0% |
GATTCAACTTATGTTGCCAT+AGG | + | chr5_4:56285431-56285450 | Msa0858670:intron | 35.0% | |
TAGCTAAGAACTTCAAATCG+AGG | + | chr5_4:56285478-56285497 | Msa0858670:CDS | 35.0% | |
!! | TGCTTGATTTGTATCGTGAT+CGG | - | chr5_4:56285508-56285527 | None:intergenic | 35.0% |
AAAACCATCCTGTGTATCTT+CGG | - | chr5_4:56285604-56285623 | None:intergenic | 35.0% | |
!!! | GATGGTTTTGAACTTGACAT+AGG | + | chr5_4:56285615-56285634 | Msa0858670:CDS | 35.0% |
ATAGCTGGCATTAGATGTTA+AGG | - | chr5_4:56285646-56285665 | None:intergenic | 35.0% | |
TAGTAGATGTTAAGCATAGC+TGG | - | chr5_4:56285661-56285680 | None:intergenic | 35.0% | |
TGAGACGATAAAAAAGCCAT+AGG | - | chr5_4:56285748-56285767 | None:intergenic | 35.0% | |
GGCTAAATATAGAAAGACTG+GGG | + | chr5_4:56285953-56285972 | Msa0858670:CDS | 35.0% | |
AAGATTCGGGTAAAGAAGAA+TGG | - | chr5_4:56286135-56286154 | None:intergenic | 35.0% | |
ATTGTGGAAGGATAAGATTC+GGG | - | chr5_4:56286148-56286167 | None:intergenic | 35.0% | |
TCATGTATAAGGTAAGTGGA+TGG | + | chr5_4:56286262-56286281 | Msa0858670:intron | 35.0% | |
! | ATCATTAAAGGGTGCAAAAG+TGG | - | chr5_4:56286398-56286417 | None:intergenic | 35.0% |
! | TGGGTTAACTGGTCAATTTT+TGG | - | chr5_4:56286483-56286502 | None:intergenic | 35.0% |
!! | ATTTCACAAAGTGGGTTAAC+TGG | - | chr5_4:56286494-56286513 | None:intergenic | 35.0% |
ATACTGAAGAGTTGCAGAAT+GGG | + | chr5_4:56286643-56286662 | Msa0858670:CDS | 35.0% | |
GACGAATGGAAAATCGTAAA+TGG | + | chr5_4:56286703-56286722 | Msa0858670:CDS | 35.0% | |
GAATGGAAAATCGTAAATGG+TGG | + | chr5_4:56286706-56286725 | Msa0858670:CDS | 35.0% | |
TTTGCATGCTCAACTTATTG+AGG | - | chr5_4:56286954-56286973 | None:intergenic | 35.0% | |
! | TCAATAAGTTGAGCATGCAA+AGG | + | chr5_4:56286953-56286972 | Msa0858670:three_prime_UTR | 35.0% |
CGTAATACTGGTGATTCACA+CGG | + | chr5_4:56271886-56271905 | Msa0858670:five_prime_UTR | 40.0% | |
GGTGGAAAGTAGTGTTTCTT+CGG | + | chr5_4:56272294-56272313 | Msa0858670:CDS | 40.0% | |
TTGCGTTTGATCACGTTCAA+CGG | + | chr5_4:56272374-56272393 | Msa0858670:CDS | 40.0% | |
GTTCAACGGTTATTAGCAGT+GGG | + | chr5_4:56272388-56272407 | Msa0858670:CDS | 40.0% | |
TGTCAGTGTCTTGTCAATGT+TGG | + | chr5_4:56272687-56272706 | Msa0858670:intron | 40.0% | |
!! | ACACTGACTCTTCTGATAGA+AGG | - | chr5_4:56272742-56272761 | None:intergenic | 40.0% |
TTCACTCTTGTAGTGATGGT+AGG | + | chr5_4:56273007-56273026 | Msa0858670:intron | 40.0% | |
CATTTAGAGGTTCGCAATTC+TGG | + | chr5_4:56273096-56273115 | Msa0858670:intron | 40.0% | |
TCTTTGAGTGTGTGTGTCTT+TGG | + | chr5_4:56273206-56273225 | Msa0858670:intron | 40.0% | |
CTTTGAGTGTGTGTGTCTTT+GGG | + | chr5_4:56273207-56273226 | Msa0858670:intron | 40.0% | |
TTTGAGTGTGTGTGTCTTTG+GGG | + | chr5_4:56273208-56273227 | Msa0858670:intron | 40.0% | |
! | AGGTTTGGGATTTGAGAAAC+AGG | + | chr5_4:56273662-56273681 | Msa0858670:intron | 40.0% |
AAATTGCTTCTGCTTTGCAG+TGG | + | chr5_4:56273686-56273705 | Msa0858670:CDS | 40.0% | |
AATTGCTTCTGCTTTGCAGT+GGG | + | chr5_4:56273687-56273706 | Msa0858670:CDS | 40.0% | |
! | ACATTTTTGTCCGGTTGTTG+TGG | + | chr5_4:56273835-56273854 | Msa0858670:intron | 40.0% |
GCCAGTGCAAAAAAAAATCC+TGG | - | chr5_4:56274014-56274033 | None:intergenic | 40.0% | |
CCACACCAAACTCAAACAAA+AGG | - | chr5_4:56274070-56274089 | None:intergenic | 40.0% | |
!! | CCTTTTGTTTGAGTTTGGTG+TGG | + | chr5_4:56274067-56274086 | Msa0858670:intron | 40.0% |
AAATGTAAGGCAGCCTTCTT+TGG | + | chr5_4:56274129-56274148 | Msa0858670:intron | 40.0% | |
TATCTCTCTGCTACCAAAGA+AGG | - | chr5_4:56274145-56274164 | None:intergenic | 40.0% | |
!! | AGAAGTGTAGGTAGCTTGTT+TGG | + | chr5_4:56274214-56274233 | Msa0858670:intron | 40.0% |
ACTTATGACCTCTGAATGAC+AGG | - | chr5_4:56274272-56274291 | None:intergenic | 40.0% | |
CATTCAGAGGTCATAAGTTC+AGG | + | chr5_4:56274274-56274293 | Msa0858670:intron | 40.0% | |
!! | TCACCAAAAAGTATTAGGGC+TGG | + | chr5_4:56274572-56274591 | Msa0858670:intron | 40.0% |
ACGGTAATGCCTGTATTCTA+TGG | + | chr5_4:56274838-56274857 | Msa0858670:intron | 40.0% | |
CTTCAATAAAGAACTGGGCT+AGG | + | chr5_4:56274911-56274930 | Msa0858670:intron | 40.0% | |
CTTCAATAAAGAACTGGGCT+AGG | + | chr5_4:56274911-56274930 | Msa0858670:intron | 40.0% | |
CTTTGGATTCTCTGTCATTC+TGG | - | chr5_4:56275170-56275189 | None:intergenic | 40.0% | |
AATCCAAAGTCACTAACCCT+AGG | + | chr5_4:56275181-56275200 | Msa0858670:intron | 40.0% | |
! | CCCAAACATTTCTTCTGAGA+AGG | - | chr5_4:56275288-56275307 | None:intergenic | 40.0% |
TGAGTCCAAAGTAACCAAGT+GGG | - | chr5_4:56275339-56275358 | None:intergenic | 40.0% | |
ATGAGTCCAAAGTAACCAAG+TGG | - | chr5_4:56275340-56275359 | None:intergenic | 40.0% | |
ACTTTGGACTCATCAAGCAA+CGG | + | chr5_4:56275347-56275366 | Msa0858670:intron | 40.0% | |
AGCAACGGATATATTATGGC+TGG | + | chr5_4:56275362-56275381 | Msa0858670:intron | 40.0% | |
CTTCATCAACCCTGTTCTAA+TGG | + | chr5_4:56275917-56275936 | Msa0858670:CDS | 40.0% | |
AACCCTGTTCTAATGGAAAG+AGG | + | chr5_4:56275924-56275943 | Msa0858670:CDS | 40.0% | |
TGCCTCTTTCCATTAGAACA+GGG | - | chr5_4:56275929-56275948 | None:intergenic | 40.0% | |
TTGCCTCTTTCCATTAGAAC+AGG | - | chr5_4:56275930-56275949 | None:intergenic | 40.0% | |
ACCTATTCAACCTGCAAACA+TGG | - | chr5_4:56276120-56276139 | None:intergenic | 40.0% | |
TGCCTAAGGGTTATAACTCA+TGG | + | chr5_4:56276152-56276171 | Msa0858670:intron | 40.0% | |
GCCTAAGGGTTATAACTCAT+GGG | + | chr5_4:56276153-56276172 | Msa0858670:intron | 40.0% | |
ACCCATGAGTTATAACCCTT+AGG | - | chr5_4:56276157-56276176 | None:intergenic | 40.0% | |
! | TTTTACCAAAACTTAGGGGG+GGG | - | chr5_4:56276249-56276268 | None:intergenic | 40.0% |
!!! | CAAGACAAGGGTTTTGAAGA+GGG | - | chr5_4:56276721-56276740 | None:intergenic | 40.0% |
TGGGGCTTAAACAAAACTAG+AGG | + | chr5_4:56276938-56276957 | Msa0858670:intron | 40.0% | |
GGGGCTTAAACAAAACTAGA+GGG | + | chr5_4:56276939-56276958 | Msa0858670:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | - | chr5_4:56277206-56277225 | None:intergenic | 40.0% | |
CTTGTGTAAAAAGCAGGGTA+AGG | - | chr5_4:56277232-56277251 | None:intergenic | 40.0% | |
!!! | TACCCTGCTTTTTACACAAG+AGG | + | chr5_4:56277232-56277251 | Msa0858670:intron | 40.0% |
AGCCTCTTGTGTAAAAAGCA+GGG | - | chr5_4:56277237-56277256 | None:intergenic | 40.0% | |
AGATTTGGAAACCCCTTGTT+AGG | + | chr5_4:56277483-56277502 | Msa0858670:intron | 40.0% | |
CCGTTTCGTAAGGTAGAATT+GGG | - | chr5_4:56277540-56277559 | None:intergenic | 40.0% | |
CCCAATTCTACCTTACGAAA+CGG | + | chr5_4:56277537-56277556 | Msa0858670:intron | 40.0% | |
! | TGACAGAGTGTTTATAGGTG+GGG | - | chr5_4:56277582-56277601 | None:intergenic | 40.0% |
! | CTGACAGAGTGTTTATAGGT+GGG | - | chr5_4:56277583-56277602 | None:intergenic | 40.0% |
! | ACTGACAGAGTGTTTATAGG+TGG | - | chr5_4:56277584-56277603 | None:intergenic | 40.0% |
! | CTGACTGACAGAGTGTTTAT+AGG | - | chr5_4:56277587-56277606 | None:intergenic | 40.0% |
CTATAAACACTCTGTCAGTC+AGG | + | chr5_4:56277585-56277604 | Msa0858670:intron | 40.0% | |
AGGTCATGTCTCATCCAATT+TGG | + | chr5_4:56277605-56277624 | Msa0858670:intron | 40.0% | |
GGTCATGTCTCATCCAATTT+GGG | + | chr5_4:56277606-56277625 | Msa0858670:intron | 40.0% | |
! | CAAGCCTTATCCAACTAAGT+GGG | + | chr5_4:56277760-56277779 | Msa0858670:intron | 40.0% |
! | AAGCCTTATCCAACTAAGTG+GGG | + | chr5_4:56277761-56277780 | Msa0858670:intron | 40.0% |
! | AATCTAAGGGCATGATAGCT+GGG | - | chr5_4:56277876-56277895 | None:intergenic | 40.0% |
GGTAGCATGTCAACAATCTA+AGG | - | chr5_4:56277890-56277909 | None:intergenic | 40.0% | |
CTGTTGGTCACTTATGAGAA+TGG | + | chr5_4:56278353-56278372 | Msa0858670:intron | 40.0% | |
AGAATGGTGTGATGTTACTC+TGG | + | chr5_4:56278369-56278388 | Msa0858670:intron | 40.0% | |
GAATGGTGTGATGTTACTCT+GGG | + | chr5_4:56278370-56278389 | Msa0858670:intron | 40.0% | |
TCTTCAATTCGATGTCCTTG+TGG | - | chr5_4:56278430-56278449 | None:intergenic | 40.0% | |
TCCCTATTATTCTCCTACAC+TGG | + | chr5_4:56278702-56278721 | Msa0858670:CDS | 40.0% | |
CACCAGTGTAGGAGAATAAT+AGG | - | chr5_4:56278707-56278726 | None:intergenic | 40.0% | |
! | TTTTATTGGCACACCAGTGT+AGG | - | chr5_4:56278718-56278737 | None:intergenic | 40.0% |
! | GGAGGTGAACTTTTTGTCTA+TGG | + | chr5_4:56278752-56278771 | Msa0858670:CDS | 40.0% |
! | GGTGAACTTTTTGTCTATGG+TGG | + | chr5_4:56278755-56278774 | Msa0858670:CDS | 40.0% |
GTCTATGGTGGCAATGAAAT+TGG | + | chr5_4:56278767-56278786 | Msa0858670:CDS | 40.0% | |
! | GAAAAGAAGACTTTTGCCTC+TGG | - | chr5_4:56279007-56279026 | None:intergenic | 40.0% |
ATCTATCATCTTCAACCTCC+AGG | - | chr5_4:56279097-56279116 | None:intergenic | 40.0% | |
ATCATTTGGATGACAGGATC+GGG | - | chr5_4:56279221-56279240 | None:intergenic | 40.0% | |
CATCATTTGGATGACAGGAT+CGG | - | chr5_4:56279222-56279241 | None:intergenic | 40.0% | |
!!! | TACAGGTTTTGAGCTTTGAC+TGG | + | chr5_4:56279508-56279527 | Msa0858670:intron | 40.0% |
CACGAAGTGCAACATCAATA+CGG | - | chr5_4:56279566-56279585 | None:intergenic | 40.0% | |
! | TCGTGGTTCTTTTGCTGATA+TGG | + | chr5_4:56279581-56279600 | Msa0858670:CDS | 40.0% |
TATTACAATCTCCCTCTGCA+TGG | - | chr5_4:56279626-56279645 | None:intergenic | 40.0% | |
CTTTGATGTCTGAGCAACAA+AGG | + | chr5_4:56279706-56279725 | Msa0858670:CDS | 40.0% | |
TGATGGCATATTGCATTGTG+GGG | - | chr5_4:56279743-56279762 | None:intergenic | 40.0% | |
! | GATGATGGCATATTGCATTG+TGG | - | chr5_4:56279745-56279764 | None:intergenic | 40.0% |
TTCAAGAGTGGGAATGATGA+TGG | - | chr5_4:56279760-56279779 | None:intergenic | 40.0% | |
!!! | GCAAGATTTTTTCCCCCTTA+TGG | + | chr5_4:56279884-56279903 | Msa0858670:intron | 40.0% |
CAAAAGTAACACCCATAAGG+GGG | - | chr5_4:56279899-56279918 | None:intergenic | 40.0% | |
GCAAAAGTAACACCCATAAG+GGG | - | chr5_4:56279900-56279919 | None:intergenic | 40.0% | |
TTAACACCACTTGCCACTAA+TGG | + | chr5_4:56280148-56280167 | Msa0858670:intron | 40.0% | |
TAACACCACTTGCCACTAAT+GGG | + | chr5_4:56280149-56280168 | Msa0858670:intron | 40.0% | |
GCAGCTACAAGAATCTACAT+AGG | - | chr5_4:56280183-56280202 | None:intergenic | 40.0% | |
!! | AGAGAAGTGCCGAGATAAAA+TGG | + | chr5_4:56280226-56280245 | Msa0858670:CDS | 40.0% |
TACATAGCAGGTTACCAAGA+TGG | + | chr5_4:56280309-56280328 | Msa0858670:CDS | 40.0% | |
AGTATGATAAGGCTAACCTC+GGG | - | chr5_4:56280393-56280412 | None:intergenic | 40.0% | |
!! | TATATTAGAGCATCGTTCGG+AGG | - | chr5_4:56280447-56280466 | None:intergenic | 40.0% |
GAATCAATTCGACTATTGGC+AGG | + | chr5_4:56280522-56280541 | Msa0858670:intron | 40.0% | |
CAAAAATCCAATGCTGACAC+TGG | - | chr5_4:56280580-56280599 | None:intergenic | 40.0% | |
ACGAACCTACATACTCTCAT+TGG | - | chr5_4:56280713-56280732 | None:intergenic | 40.0% | |
AGTATGTAGGTTCGTCTCTA+TGG | + | chr5_4:56280718-56280737 | Msa0858670:intron | 40.0% | |
GTATGTAGGTTCGTCTCTAT+GGG | + | chr5_4:56280719-56280738 | Msa0858670:intron | 40.0% | |
! | TTCGTCTCTATGGGCTAATA+CGG | + | chr5_4:56280728-56280747 | Msa0858670:CDS | 40.0% |
TTCCTTTCCTATCACGTCAT+AGG | + | chr5_4:56281250-56281269 | Msa0858670:intron | 40.0% | |
AACCTATGACGTGATAGGAA+AGG | - | chr5_4:56281255-56281274 | None:intergenic | 40.0% | |
GTCTAGATTCCCATAACTCA+GGG | - | chr5_4:56281524-56281543 | None:intergenic | 40.0% | |
TGTCTAGATTCCCATAACTC+AGG | - | chr5_4:56281525-56281544 | None:intergenic | 40.0% | |
GTTATGGGAATCTAGACAAG+TGG | + | chr5_4:56281527-56281546 | Msa0858670:intron | 40.0% | |
CATAATGTGAATCAAGGGGA+CGG | + | chr5_4:56281748-56281767 | Msa0858670:CDS | 40.0% | |
GAAAACACTGCTTTGCAATG+AGG | - | chr5_4:56281775-56281794 | None:intergenic | 40.0% | |
CTACAGTTTGCAAATCTTGG+AGG | + | chr5_4:56281820-56281839 | Msa0858670:CDS | 40.0% | |
AGTTGGATATGAACATGGGA+AGG | + | chr5_4:56281852-56281871 | Msa0858670:CDS | 40.0% | |
CATAGAAACTACTGCAGATG+TGG | - | chr5_4:56282056-56282075 | None:intergenic | 40.0% | |
! | GTCTAGCTTAAACATTCCAC+AGG | + | chr5_4:56282096-56282115 | Msa0858670:CDS | 40.0% |
TTTCTGACAACTCTGCAAAG+GGG | + | chr5_4:56282134-56282153 | Msa0858670:CDS | 40.0% | |
GGCTAGTGTTCATTATGACA+AGG | + | chr5_4:56282155-56282174 | Msa0858670:CDS | 40.0% | |
TATGACAAGGGATTCACACT+TGG | + | chr5_4:56282168-56282187 | Msa0858670:CDS | 40.0% | |
GTTGCGATAGATACTGAAAC+AGG | + | chr5_4:56282190-56282209 | Msa0858670:CDS | 40.0% | |
CACATCATAGGCAAGTGTTA+GGG | + | chr5_4:56282271-56282290 | Msa0858670:intron | 40.0% | |
ATAGGCAAGTGTTAGGGTTA+AGG | + | chr5_4:56282277-56282296 | Msa0858670:intron | 40.0% | |
CTTATTGCTACCCTGTAGTA+AGG | - | chr5_4:56282649-56282668 | None:intergenic | 40.0% | |
CCCTTGTAAAAGAATGTGTC+TGG | + | chr5_4:56282685-56282704 | Msa0858670:CDS | 40.0% | |
!! | ATAATGGATCTGACCTTTCC+TGG | - | chr5_4:56282848-56282867 | None:intergenic | 40.0% |
AGGTCAGATCCATTATGACA+AGG | + | chr5_4:56282852-56282871 | Msa0858670:intron | 40.0% | |
GGTCAGATCCATTATGACAA+GGG | + | chr5_4:56282853-56282872 | Msa0858670:intron | 40.0% | |
ACTTTATTATGAGAGGGAGG+TGG | + | chr5_4:56283157-56283176 | Msa0858670:intron | 40.0% | |
AACTACTTGAGCTACTCCTT+GGG | - | chr5_4:56283245-56283264 | None:intergenic | 40.0% | |
AGTAGCTCAAGTAGTTGAGT+TGG | + | chr5_4:56283249-56283268 | Msa0858670:intron | 40.0% | |
GTAGCTCAAGTAGTTGAGTT+GGG | + | chr5_4:56283250-56283269 | Msa0858670:intron | 40.0% | |
ATACAGATTCAGCGCAAGAA+GGG | - | chr5_4:56283572-56283591 | None:intergenic | 40.0% | |
GCTTATCAAGAAGAGTGAGA+AGG | - | chr5_4:56283672-56283691 | None:intergenic | 40.0% | |
GATTTAATGTCCCTTTGAGC+AGG | + | chr5_4:56283700-56283719 | Msa0858670:intron | 40.0% | |
! | CAGTCTTCAAGTTCCATCTT+AGG | - | chr5_4:56283773-56283792 | None:intergenic | 40.0% |
ATGGAACTTGAAGACTGACA+TGG | + | chr5_4:56283776-56283795 | Msa0858670:CDS | 40.0% | |
CTTTCCTATTGAAACAGTGC+TGG | + | chr5_4:56284041-56284060 | Msa0858670:intron | 40.0% | |
TCTTCCAGCACTGTTTCAAT+AGG | - | chr5_4:56284048-56284067 | None:intergenic | 40.0% | |
! | AGCATTTTGTAGCTGTTACC+AGG | + | chr5_4:56284138-56284157 | Msa0858670:intron | 40.0% |
GATTTAAAGATTAGGCAGGG+TGG | + | chr5_4:56284355-56284374 | Msa0858670:intron | 40.0% | |
AAGGATCCAAAGCTTCATAG+TGG | - | chr5_4:56284565-56284584 | None:intergenic | 40.0% | |
! | CCTTTTATTAGATCCTGCCA+CGG | - | chr5_4:56284640-56284659 | None:intergenic | 40.0% |
! | CTTTCTGTTCCTTCCTTTTC+TGG | + | chr5_4:56284936-56284955 | Msa0858670:intron | 40.0% |
TGAAGACAAGGAAAAGACTC+TGG | - | chr5_4:56285284-56285303 | None:intergenic | 40.0% | |
!! | AAGATAGAAGGTGCTTCCTA+TGG | - | chr5_4:56285450-56285469 | None:intergenic | 40.0% |
!! | GAAGAAGGCTTTAAGAATGG+AGG | - | chr5_4:56285576-56285595 | None:intergenic | 40.0% |
!! | CCTGAAGAAGGCTTTAAGAA+TGG | - | chr5_4:56285579-56285598 | None:intergenic | 40.0% |
CCATTCTTAAAGCCTTCTTC+AGG | + | chr5_4:56285576-56285595 | Msa0858670:CDS | 40.0% | |
!!! | TTTCTTCTGCTTTTTCTGCG+AGG | - | chr5_4:56285860-56285879 | None:intergenic | 40.0% |
AGACAGACAGAAGTTACTTG+AGG | + | chr5_4:56285881-56285900 | Msa0858670:CDS | 40.0% | |
!! | TCTTCAGTTGTTCTAGCTCT+TGG | - | chr5_4:56285927-56285946 | None:intergenic | 40.0% |
TTGACCTAATCACTTGCTTC+AGG | + | chr5_4:56286028-56286047 | Msa0858670:intron | 40.0% | |
ATGAGGCTAGATATTGTGGA+AGG | - | chr5_4:56286160-56286179 | None:intergenic | 40.0% | |
GATTTGTCTTTCGGTGATTC+AGG | - | chr5_4:56286209-56286228 | None:intergenic | 40.0% | |
CATACTGAAGAGTTGCAGAA+TGG | + | chr5_4:56286642-56286661 | Msa0858670:CDS | 40.0% | |
TACTGAAGAGTTGCAGAATG+GGG | + | chr5_4:56286644-56286663 | Msa0858670:CDS | 40.0% | |
!! | AAGTGAACTTGCTAGACGAA+TGG | + | chr5_4:56286689-56286708 | Msa0858670:CDS | 40.0% |
! | CAACTTCTAAAGGATTGCAG+CGG | - | chr5_4:56286773-56286792 | None:intergenic | 40.0% |
! | GCTGCCTTTAAAAACAAGTG+AGG | - | chr5_4:56286816-56286835 | None:intergenic | 40.0% |
! | CGGACGCTACTGTTTTATCT+TGG | - | chr5_4:56271857-56271876 | None:intergenic | 45.0% |
CCAGTATTACGCATCATGCT+CGG | - | chr5_4:56271877-56271896 | None:intergenic | 45.0% | |
ATTGTTGCGGTGGTGATTTC+TGG | - | chr5_4:56272062-56272081 | None:intergenic | 45.0% | |
ACCACCGCAACAATCTTCAA+CGG | + | chr5_4:56272068-56272087 | Msa0858670:CDS | 45.0% | |
CGTACCGTTGAAGATTGTTG+CGG | - | chr5_4:56272075-56272094 | None:intergenic | 45.0% | |
TGTTCAGCAACAGAATGTGG+TGG | + | chr5_4:56272276-56272295 | Msa0858670:intron | 45.0% | |
CCATAGTGAAGAACAACTCG+CGG | - | chr5_4:56272331-56272350 | None:intergenic | 45.0% | |
CGTTCAACGGTTATTAGCAG+TGG | + | chr5_4:56272387-56272406 | Msa0858670:CDS | 45.0% | |
CACAGACACGAACACAATAC+CGG | + | chr5_4:56272594-56272613 | Msa0858670:intron | 45.0% | |
TGTTGGTCACTGACATGTGT+TGG | + | chr5_4:56272704-56272723 | Msa0858670:intron | 45.0% | |
TTGTTGTGGTCCAGGTTAGT+TGG | + | chr5_4:56273849-56273868 | Msa0858670:intron | 45.0% | |
ATGCTCAGTTCCAACTAACC+TGG | - | chr5_4:56273862-56273881 | None:intergenic | 45.0% | |
! | AGGTTAGTTGGAACTGAGCA+TGG | + | chr5_4:56273861-56273880 | Msa0858670:intron | 45.0% |
! | GGTTAGTTGGAACTGAGCAT+GGG | + | chr5_4:56273862-56273881 | Msa0858670:intron | 45.0% |
TGAGTGATCCTGTCATTCAG+AGG | + | chr5_4:56274261-56274280 | Msa0858670:intron | 45.0% | |
!! | AAACGGGTTGAAGGGGAAAA+CGG | - | chr5_4:56274664-56274683 | None:intergenic | 45.0% |
!! | CAAAACCAAACGGGTTGAAG+GGG | - | chr5_4:56274671-56274690 | None:intergenic | 45.0% |
!! | GCAAAACCAAACGGGTTGAA+GGG | - | chr5_4:56274672-56274691 | None:intergenic | 45.0% |
GAGGATAGGATGAGTTGTGA+AGG | + | chr5_4:56274808-56274827 | Msa0858670:intron | 45.0% | |
! | GATTGTGGACCAGTTAGCTT+TGG | - | chr5_4:56274965-56274984 | None:intergenic | 45.0% |
AAGCTAACTGGTCCACAATC+CGG | + | chr5_4:56274965-56274984 | Msa0858670:intron | 45.0% | |
GCTTATCCAAATCCGGATTG+TGG | - | chr5_4:56274980-56274999 | None:intergenic | 45.0% | |
AAGCTAACTGGTCCACAATC+CGG | + | chr5_4:56274965-56274984 | Msa0858670:intron | 45.0% | |
GCTTATCCAAATCCGGATTG+TGG | - | chr5_4:56274980-56274999 | None:intergenic | 45.0% | |
! | AAGCCTAGGGTTAGTGACTT+TGG | - | chr5_4:56275187-56275206 | None:intergenic | 45.0% |
! | TCTGGGTATTGCTAAGCCTA+GGG | - | chr5_4:56275200-56275219 | None:intergenic | 45.0% |
AGAGGATCTCCGGTTCAAAT+CGG | - | chr5_4:56275252-56275271 | None:intergenic | 45.0% | |
ATAACTAAGAGGGACCCACT+TGG | + | chr5_4:56275322-56275341 | Msa0858670:intron | 45.0% | |
TATGGCTGGAATTGCATGAC+TGG | + | chr5_4:56275376-56275395 | Msa0858670:intron | 45.0% | |
CATTCCAACTGCTTCTGCAA+AGG | - | chr5_4:56275867-56275886 | None:intergenic | 45.0% | |
!! | ACAGGGTTGATGAAGAACTC+TGG | - | chr5_4:56275912-56275931 | None:intergenic | 45.0% |
ATCTCCATGGCTAAGCTAGT+TGG | + | chr5_4:56276035-56276054 | Msa0858670:intron | 45.0% | |
! | GCCATGTTTGCAGGTTGAAT+AGG | + | chr5_4:56276116-56276135 | Msa0858670:intron | 45.0% |
TTTACCAAAACTTAGGGGGG+GGG | - | chr5_4:56276248-56276267 | None:intergenic | 45.0% | |
!!! | GCAAGACAAGGGTTTTGAAG+AGG | - | chr5_4:56276722-56276741 | None:intergenic | 45.0% |
GCGTACAATACACCAAATGG+TGG | - | chr5_4:56277207-56277226 | None:intergenic | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | - | chr5_4:56277210-56277229 | None:intergenic | 45.0% | |
CAGCCTCTTGTGTAAAAAGC+AGG | - | chr5_4:56277238-56277257 | None:intergenic | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | + | chr5_4:56277243-56277262 | Msa0858670:intron | 45.0% |
GTTGTTGTCATGTGACTGGA+AGG | - | chr5_4:56277283-56277302 | None:intergenic | 45.0% | |
GCCGTTTCGTAAGGTAGAAT+TGG | - | chr5_4:56277541-56277560 | None:intergenic | 45.0% | |
ACCTTACGAAACGGCTTGTA+AGG | + | chr5_4:56277546-56277565 | Msa0858670:intron | 45.0% | |
ACCTTACAAGCCGTTTCGTA+AGG | - | chr5_4:56277550-56277569 | None:intergenic | 45.0% | |
! | GACAGAGTGTTTATAGGTGG+GGG | - | chr5_4:56277581-56277600 | None:intergenic | 45.0% |
CCACTTAGTTGGATAAGGCT+TGG | - | chr5_4:56277762-56277781 | None:intergenic | 45.0% | |
! | CCAAGCCTTATCCAACTAAG+TGG | + | chr5_4:56277759-56277778 | Msa0858670:intron | 45.0% |
!!! | CTTTTTCGACCCCACTTAGT+TGG | - | chr5_4:56277773-56277792 | None:intergenic | 45.0% |
CAACTAAGTGGGGTCGAAAA+AGG | + | chr5_4:56277771-56277790 | Msa0858670:intron | 45.0% | |
GATAGCTGGGTTTATCTGCA+TGG | - | chr5_4:56277863-56277882 | None:intergenic | 45.0% | |
! | CAATCTAAGGGCATGATAGC+TGG | - | chr5_4:56277877-56277896 | None:intergenic | 45.0% |
GCACACCCTTAGAACAACTA+TGG | - | chr5_4:56278075-56278094 | None:intergenic | 45.0% | |
GTATCTTGGGCATCTAGTGA+CGG | + | chr5_4:56278542-56278561 | Msa0858670:CDS | 45.0% | |
GTCGTCGTTGGATATGTAGA+TGG | + | chr5_4:56278572-56278591 | Msa0858670:CDS | 45.0% | |
TCTATTGGAGAGTCAGCAGT+AGG | - | chr5_4:56278620-56278639 | None:intergenic | 45.0% | |
ATTCAGAAGATGGCCTGTTG+TGG | - | chr5_4:56278950-56278969 | None:intergenic | 45.0% | |
ATGAAGTGGAAATCAGCCAG+AGG | + | chr5_4:56278988-56279007 | Msa0858670:intron | 45.0% | |
!! | TTGAGCTTTGACTGGTCTTG+TGG | + | chr5_4:56279516-56279535 | Msa0858670:CDS | 45.0% |
!! | TGAGCTTTGACTGGTCTTGT+GGG | + | chr5_4:56279517-56279536 | Msa0858670:CDS | 45.0% |
! | CGTATTGATGTTGCACTTCG+TGG | + | chr5_4:56279564-56279583 | Msa0858670:CDS | 45.0% |
GATGGCATATTGCATTGTGG+GGG | - | chr5_4:56279742-56279761 | None:intergenic | 45.0% | |
GTCATCTGTGGTTCAAGAGT+GGG | - | chr5_4:56279771-56279790 | None:intergenic | 45.0% | |
TGTCATCTGTGGTTCAAGAG+TGG | - | chr5_4:56279772-56279791 | None:intergenic | 45.0% | |
AACCACAGATGACAACAGCA+AGG | + | chr5_4:56279778-56279797 | Msa0858670:CDS | 45.0% | |
CATTTCCCATTAGTGGCAAG+TGG | - | chr5_4:56280157-56280176 | None:intergenic | 45.0% | |
GTTACCAAGATGGATCTGCT+CGG | + | chr5_4:56280319-56280338 | Msa0858670:CDS | 45.0% | |
ATATCCGAGCAGATCCATCT+TGG | - | chr5_4:56280326-56280345 | None:intergenic | 45.0% | |
AAGATGGATCTGCTCGGATA+TGG | + | chr5_4:56280325-56280344 | Msa0858670:CDS | 45.0% | |
AGATGGATCTGCTCGGATAT+GGG | + | chr5_4:56280326-56280345 | Msa0858670:CDS | 45.0% | |
AAGTTCTCCAGTGTCAGCAT+TGG | + | chr5_4:56280570-56280589 | Msa0858670:CDS | 45.0% | |
!! | GTCAGCATTGGATTTTTGCC+CGG | + | chr5_4:56280582-56280601 | Msa0858670:CDS | 45.0% |
ACAGCCAGATGTAGACTATC+CGG | - | chr5_4:56280604-56280623 | None:intergenic | 45.0% | |
GATAGTCTACATCTGGCTGT+TGG | + | chr5_4:56280604-56280623 | Msa0858670:CDS | 45.0% | |
GTGACAGAAAATGGAACCGA+AGG | + | chr5_4:56280778-56280797 | Msa0858670:CDS | 45.0% | |
GGAAAACCCAAGTCTCACAT+TGG | - | chr5_4:56281397-56281416 | None:intergenic | 45.0% | |
GGGCTACAGTTTGCAAATCT+TGG | + | chr5_4:56281817-56281836 | Msa0858670:CDS | 45.0% | |
GCACATCATAGGCAAGTGTT+AGG | + | chr5_4:56282270-56282289 | Msa0858670:intron | 45.0% | |
ATCATTCTGCTGAGGAGAGT+GGG | - | chr5_4:56282397-56282416 | None:intergenic | 45.0% | |
AATCATTCTGCTGAGGAGAG+TGG | - | chr5_4:56282398-56282417 | None:intergenic | 45.0% | |
TCTCCTCAGCAGAATGATTC+TGG | + | chr5_4:56282399-56282418 | Msa0858670:CDS | 45.0% | |
GTTCCAGAATCATTCTGCTG+AGG | - | chr5_4:56282405-56282424 | None:intergenic | 45.0% | |
CTGGTTGTTCTGTACCAAAC+TGG | + | chr5_4:56282744-56282763 | Msa0858670:CDS | 45.0% | |
TTCAAGTCATGCATAGCTCC+AGG | + | chr5_4:56282827-56282846 | Msa0858670:intron | 45.0% | |
GTGTGCATCCCTTGTCATAA+TGG | - | chr5_4:56282864-56282883 | None:intergenic | 45.0% | |
GATCTGCTGTGAAACTGCAA+TGG | + | chr5_4:56283003-56283022 | Msa0858670:intron | 45.0% | |
GTAAAGCAAAAAGGTCCCCA+AGG | + | chr5_4:56283226-56283245 | Msa0858670:intron | 45.0% | |
ACTACTTGAGCTACTCCTTG+GGG | - | chr5_4:56283244-56283263 | None:intergenic | 45.0% | |
CAACTACTTGAGCTACTCCT+TGG | - | chr5_4:56283246-56283265 | None:intergenic | 45.0% | |
CATACAGATTCAGCGCAAGA+AGG | - | chr5_4:56283573-56283592 | None:intergenic | 45.0% | |
TTGGTAAGGACCTGCTCAAA+GGG | - | chr5_4:56283713-56283732 | None:intergenic | 45.0% | |
TTACCAACTCTGGACGTGTT+GGG | + | chr5_4:56283726-56283745 | Msa0858670:CDS | 45.0% | |
GCCTGTGCATTAAGTCCTAA+GGG | + | chr5_4:56284378-56284397 | Msa0858670:intron | 45.0% | |
CCGTGGCAGGATCTAATAAA+AGG | + | chr5_4:56284637-56284656 | Msa0858670:intron | 45.0% | |
TGAAATGCTAAGGAGGGTCT+TGG | - | chr5_4:56284734-56284753 | None:intergenic | 45.0% | |
! | CTCTTTTCCACAGGACAACA+GGG | - | chr5_4:56284907-56284926 | None:intergenic | 45.0% |
! | TTACCAGAGCTCTTTTCCAC+AGG | - | chr5_4:56284916-56284935 | None:intergenic | 45.0% |
CATACATGGCCAGAAAAGGA+AGG | - | chr5_4:56284948-56284967 | None:intergenic | 45.0% | |
!! | TGTTCAGGCTTGTTGTGCTT+CGG | + | chr5_4:56285379-56285398 | Msa0858670:intron | 45.0% |
!! | AGGCTTTAAGAATGGAGGAC+TGG | - | chr5_4:56285571-56285590 | None:intergenic | 45.0% |
GCATCCTGAAGCAAGTGATT+AGG | - | chr5_4:56286035-56286054 | None:intergenic | 45.0% | |
CAAGGGATAAGCTTGTAGAG+CGG | + | chr5_4:56286075-56286094 | Msa0858670:CDS | 45.0% | |
GGAGATGAGGCTAGATATTG+TGG | - | chr5_4:56286164-56286183 | None:intergenic | 45.0% | |
GTAAACATGACGAGCAGAGA+TGG | - | chr5_4:56286607-56286626 | None:intergenic | 45.0% | |
CAGTATGATCGTTGAGCATC+TGG | - | chr5_4:56286629-56286648 | None:intergenic | 45.0% | |
! | GGCACAAGATTTTGCTTCCA+TGG | + | chr5_4:56286665-56286684 | Msa0858670:CDS | 45.0% |
TCTAGCAAGTTCACTTGCCA+TGG | - | chr5_4:56286685-56286704 | None:intergenic | 45.0% | |
!! | TCAATTAAATTAAATTAAAA+CGG | - | chr5_4:56277132-56277151 | None:intergenic | 5.0% |
!!! | TTTTAATTTAATTTAATTGA+GGG | + | chr5_4:56277132-56277151 | Msa0858670:intron | 5.0% |
CCGAGCATGATGCGTAATAC+TGG | + | chr5_4:56271874-56271893 | Msa0858670:five_prime_UTR | 50.0% | |
ACCGTTGAAGATTGTTGCGG+TGG | - | chr5_4:56272072-56272091 | None:intergenic | 50.0% | |
CGGTGTTCAGCAACAGAATG+TGG | + | chr5_4:56272273-56272292 | Msa0858670:intron | 50.0% | |
CCGCGAGTTGTTCTTCACTA+TGG | + | chr5_4:56272328-56272347 | Msa0858670:CDS | 50.0% | |
GCAAGAATAGACGCAGTCGA+TGG | - | chr5_4:56272358-56272377 | None:intergenic | 50.0% | |
TCTGTGTGACGTATCAGTGC+CGG | - | chr5_4:56272616-56272635 | None:intergenic | 50.0% | |
CTAACCTGGACCACAACAAC+CGG | - | chr5_4:56273848-56273867 | None:intergenic | 50.0% | |
AGTTGGAACTGAGCATGGGT+TGG | + | chr5_4:56273866-56273885 | Msa0858670:CDS | 50.0% | |
! | TTTGCACTGGCCAAAATGGC+TGG | + | chr5_4:56274023-56274042 | Msa0858670:intron | 50.0% |
! | GTTTTCCCCTTCAACCCGTT+TGG | + | chr5_4:56274663-56274682 | Msa0858670:intron | 50.0% |
!! | CGCAAAACCAAACGGGTTGA+AGG | - | chr5_4:56274673-56274692 | None:intergenic | 50.0% |
ACTGGTCCACAATCCGGATT+TGG | + | chr5_4:56274971-56274990 | Msa0858670:intron | 50.0% | |
ACTGGTCCACAATCCGGATT+TGG | + | chr5_4:56274971-56274990 | Msa0858670:intron | 50.0% | |
! | CTCTGGGTATTGCTAAGCCT+AGG | - | chr5_4:56275201-56275220 | None:intergenic | 50.0% |
ACGGAAAAGGCGAATGCTCT+GGG | - | chr5_4:56275217-56275236 | None:intergenic | 50.0% | |
AACGGAAAAGGCGAATGCTC+TGG | - | chr5_4:56275218-56275237 | None:intergenic | 50.0% | |
TTTGAACCGGAGATCCTCTC+TGG | + | chr5_4:56275253-56275272 | Msa0858670:intron | 50.0% | |
AGGGACCCACTTGGTTACTT+TGG | + | chr5_4:56275331-56275350 | Msa0858670:intron | 50.0% | |
CACACCTTTGCAGAAGCAGT+TGG | + | chr5_4:56275860-56275879 | Msa0858670:intron | 50.0% | |
! | CCATCCAACTAGCTTAGCCA+TGG | - | chr5_4:56276042-56276061 | None:intergenic | 50.0% |
CCATGGCTAAGCTAGTTGGA+TGG | + | chr5_4:56276039-56276058 | Msa0858670:intron | 50.0% | |
TCATGTGACTGGAAGGTCAC+GGG | - | chr5_4:56277276-56277295 | None:intergenic | 50.0% | |
GTCATGTGACTGGAAGGTCA+CGG | - | chr5_4:56277277-56277296 | None:intergenic | 50.0% | |
CAACTTTACCAGTTGCGCCA+AGG | + | chr5_4:56277299-56277318 | Msa0858670:intron | 50.0% | |
ACGAAACGGCTTGTAAGGTG+AGG | + | chr5_4:56277551-56277570 | Msa0858670:intron | 50.0% | |
AAAACCAGCGGATGCTTACG+TGG | + | chr5_4:56277712-56277731 | Msa0858670:intron | 50.0% | |
AAACCAGCGGATGCTTACGT+GGG | + | chr5_4:56277713-56277732 | Msa0858670:intron | 50.0% | |
CGACCCCACTTAGTTGGATA+AGG | - | chr5_4:56277767-56277786 | None:intergenic | 50.0% | |
GTGGGGTCGAAAAAGGATCA+CGG | + | chr5_4:56277778-56277797 | Msa0858670:intron | 50.0% | |
AGTTCTCATCAGGGACCACA+AGG | + | chr5_4:56278412-56278431 | Msa0858670:CDS | 50.0% | |
CCTAGTGATTGCCATGCAGA+GGG | + | chr5_4:56279612-56279631 | Msa0858670:CDS | 50.0% | |
!! | AGCCTTGCTGTTGTCATCTG+TGG | - | chr5_4:56279783-56279802 | None:intergenic | 50.0% |
CCTGGAACACCACCAATCAA+AGG | - | chr5_4:56280252-56280271 | None:intergenic | 50.0% | |
!! | CCTTTGATTGGTGGTGTTCC+AGG | + | chr5_4:56280249-56280268 | Msa0858670:CDS | 50.0% |
TTGCCCGGATAGTCTACATC+TGG | + | chr5_4:56280597-56280616 | Msa0858670:CDS | 50.0% | |
CAGCCAGATGTAGACTATCC+GGG | - | chr5_4:56280603-56280622 | None:intergenic | 50.0% | |
!! | CTGGCTGTTGGTGATGAAAG+TGG | + | chr5_4:56280616-56280635 | Msa0858670:CDS | 50.0% |
! | TGGCGGACAAGTGGTTTGTA+AGG | - | chr5_4:56281102-56281121 | None:intergenic | 50.0% |
ATGATAGGCTTGGGGAGTTG+AGG | - | chr5_4:56281475-56281494 | None:intergenic | 50.0% | |
CTTGGAGGGAAGCTTGTAGT+TGG | + | chr5_4:56281835-56281854 | Msa0858670:CDS | 50.0% | |
GTCATGCATAGCTCCAGGAA+AGG | + | chr5_4:56282832-56282851 | Msa0858670:intron | 50.0% | |
GGATGCACACTTTGTTGCGA+TGG | + | chr5_4:56282874-56282893 | Msa0858670:intron | 50.0% | |
TGATATCAGGGGGGGTTCTT+GGG | - | chr5_4:56283203-56283222 | None:intergenic | 50.0% | |
TTGATATCAGGGGGGGTTCT+TGG | - | chr5_4:56283204-56283223 | None:intergenic | 50.0% | |
!! | AGTTGAGTTGGGACACTCGA+AGG | + | chr5_4:56283261-56283280 | Msa0858670:intron | 50.0% |
! | GTTGGTAAGGACCTGCTCAA+AGG | - | chr5_4:56283714-56283733 | None:intergenic | 50.0% |
!! | CAACACGTCCAGAGTTGGTA+AGG | - | chr5_4:56283727-56283746 | None:intergenic | 50.0% |
CTTACCAACTCTGGACGTGT+TGG | + | chr5_4:56283725-56283744 | Msa0858670:CDS | 50.0% | |
GGCCTGTGCATTAAGTCCTA+AGG | + | chr5_4:56284377-56284396 | Msa0858670:intron | 50.0% | |
GCCCTTAGGACTTAATGCAC+AGG | - | chr5_4:56284382-56284401 | None:intergenic | 50.0% | |
TTCTTGTCCCTGTTGTCCTG+TGG | + | chr5_4:56284897-56284916 | Msa0858670:CDS | 50.0% | |
! | GCTCTTTTCCACAGGACAAC+AGG | - | chr5_4:56284908-56284927 | None:intergenic | 50.0% |
TGTCCTGTGGAAAAGAGCTC+TGG | + | chr5_4:56284910-56284929 | Msa0858670:CDS | 50.0% | |
! | TGTCTGGGGCTCTCTTCTAT+GGG | - | chr5_4:56285138-56285157 | None:intergenic | 50.0% |
! | TTGTCTGGGGCTCTCTTCTA+TGG | - | chr5_4:56285139-56285158 | None:intergenic | 50.0% |
CATATTCAGCGACCGCCTTT+GGG | - | chr5_4:56285162-56285181 | None:intergenic | 50.0% | |
TCATATTCAGCGACCGCCTT+TGG | - | chr5_4:56285163-56285182 | None:intergenic | 50.0% | |
!! | GTATCTTCGGTGCCTGAAGA+AGG | - | chr5_4:56285591-56285610 | None:intergenic | 50.0% |
!! | TTCAGGCACCGAAGATACAC+AGG | + | chr5_4:56285593-56285612 | Msa0858670:CDS | 50.0% |
!!! | TCTTGGTTTTGCGTCAGTGG+AGG | - | chr5_4:56285910-56285929 | None:intergenic | 50.0% |
!!! | AGCTCTTGGTTTTGCGTCAG+TGG | - | chr5_4:56285913-56285932 | None:intergenic | 50.0% |
AGAGCGGCAAGAAAAACTCC+AGG | + | chr5_4:56286091-56286110 | Msa0858670:CDS | 50.0% | |
GACGAGCAGAGATGGTTAGA+TGG | - | chr5_4:56286599-56286618 | None:intergenic | 50.0% | |
!! | AAGCACATACGGAGAGTGCC+TGG | - | chr5_4:56273489-56273508 | None:intergenic | 55.0% |
TTGTCCGGTTGTTGTGGTCC+AGG | + | chr5_4:56273841-56273860 | Msa0858670:intron | 55.0% | |
TCTCCTCCAGAGAGGATCTC+CGG | - | chr5_4:56275262-56275281 | None:intergenic | 55.0% | |
GAAGGTAGTCTCCTCCAGAG+AGG | - | chr5_4:56275270-56275289 | None:intergenic | 55.0% | |
! | ATAGCCCCCCCCCTAAGTTT+TGG | + | chr5_4:56276241-56276260 | Msa0858670:intron | 55.0% |
! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr5_4:56277162-56277181 | None:intergenic | 55.0% |
ACTAAAGCTCCCGCATACGC+AGG | + | chr5_4:56277166-56277185 | Msa0858670:intron | 55.0% | |
CTAAAGCTCCCGCATACGCA+GGG | + | chr5_4:56277167-56277186 | Msa0858670:intron | 55.0% | |
AAGGTCACGGGTTCAAGTCC+TGG | - | chr5_4:56277264-56277283 | None:intergenic | 55.0% | |
GACGGATCAGTTGTCGTCGT+TGG | + | chr5_4:56278560-56278579 | Msa0858670:CDS | 55.0% | |
GCCTAGTGATTGCCATGCAG+AGG | + | chr5_4:56279611-56279630 | Msa0858670:CDS | 55.0% | |
CCCTCTGCATGGCAATCACT+AGG | - | chr5_4:56279615-56279634 | None:intergenic | 55.0% | |
!! | AGAGCATCGTTCGGAGGAGA+GGG | - | chr5_4:56280441-56280460 | None:intergenic | 55.0% |
!! | TAGAGCATCGTTCGGAGGAG+AGG | - | chr5_4:56280442-56280461 | None:intergenic | 55.0% |
TAGGCTTGGGGAGTTGAGGT+TGG | - | chr5_4:56281471-56281490 | None:intergenic | 55.0% | |
GAGCAGGTCCTTACCAACTC+TGG | + | chr5_4:56283716-56283735 | Msa0858670:intron | 55.0% | |
TCTCCCAACACGTCCAGAGT+TGG | - | chr5_4:56283732-56283751 | None:intergenic | 55.0% | |
GTGCAATAAAGCTCACGCCG+TGG | + | chr5_4:56284620-56284639 | Msa0858670:intron | 55.0% | |
AATAAAGCTCACGCCGTGGC+AGG | + | chr5_4:56284624-56284643 | Msa0858670:intron | 55.0% | |
! | GGCACCGAAGATACACAGGA+TGG | + | chr5_4:56285597-56285616 | Msa0858670:CDS | 55.0% |
CTTGCTTCAGGATGCCTCGA+CGG | + | chr5_4:56286040-56286059 | Msa0858670:intron | 55.0% | |
GGGCTAGGCCCATAGCTACA+TGG | + | chr5_4:56274926-56274945 | Msa0858670:intron | 60.0% | |
GGGCTAGGCCCATAGCTACA+TGG | + | chr5_4:56274926-56274945 | Msa0858670:intron | 60.0% | |
GAACCGGAGATCCTCTCTGG+AGG | + | chr5_4:56275256-56275275 | Msa0858670:intron | 60.0% | |
! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr5_4:56277161-56277180 | None:intergenic | 60.0% |
! | CAAATGGTGGGACCCCTTCC+CGG | - | chr5_4:56277194-56277213 | None:intergenic | 60.0% |
AGGGGTAACCTTGGCGCAAC+TGG | - | chr5_4:56277310-56277329 | None:intergenic | 60.0% | |
GATCCCACGTAAGCATCCGC+TGG | - | chr5_4:56277719-56277738 | None:intergenic | 60.0% | |
AGCATCGTTCGGAGGAGAGG+GGG | - | chr5_4:56280439-56280458 | None:intergenic | 60.0% | |
! | GAGCATCGTTCGGAGGAGAG+GGG | - | chr5_4:56280440-56280459 | None:intergenic | 60.0% |
! | CGGCGCTGTGTTGTTCCAGA+TGG | + | chr5_4:56282339-56282358 | Msa0858670:intron | 60.0% |
TCAGGGGGGGTTCTTGGGTA+AGG | - | chr5_4:56283198-56283217 | None:intergenic | 60.0% | |
GAGGGTCTTGGCGCAACAGT+TGG | - | chr5_4:56284722-56284741 | None:intergenic | 60.0% | |
GAGAGCCCCAGACAACCCAA+AGG | + | chr5_4:56285144-56285163 | Msa0858670:intron | 60.0% | |
AGCCCCAGACAACCCAAAGG+CGG | + | chr5_4:56285147-56285166 | Msa0858670:intron | 60.0% | |
!! | GACCGCCTTTGGGTTGTCTG+GGG | - | chr5_4:56285152-56285171 | None:intergenic | 60.0% |
!! | CGACCGCCTTTGGGTTGTCT+GGG | - | chr5_4:56285153-56285172 | None:intergenic | 60.0% |
GACGGCAGCTGCACTTGCAA+GGG | + | chr5_4:56286058-56286077 | Msa0858670:CDS | 60.0% | |
TTCCCGGACCCTGCGTATGC+GGG | - | chr5_4:56277178-56277197 | None:intergenic | 65.0% | |
CTTCCCGGACCCTGCGTATG+CGG | - | chr5_4:56277179-56277198 | None:intergenic | 65.0% | |
GCATACGCAGGGTCCGGGAA+GGG | + | chr5_4:56277178-56277197 | Msa0858670:intron | 65.0% | |
CATACGCAGGGTCCGGGAAG+GGG | + | chr5_4:56277179-56277198 | Msa0858670:intron | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | + | chr5_4:56277192-56277211 | Msa0858670:intron | 65.0% | |
!! | GCGACCGCCTTTGGGTTGTC+TGG | - | chr5_4:56285154-56285173 | None:intergenic | 65.0% |
TGCAAGTGCAGCTGCCGTCG+AGG | - | chr5_4:56286057-56286076 | None:intergenic | 65.0% | |
CGACGGCAGCTGCACTTGCA+AGG | + | chr5_4:56286057-56286076 | Msa0858670:CDS | 65.0% | |
GCTCCCGCATACGCAGGGTC+CGG | + | chr5_4:56277172-56277191 | Msa0858670:intron | 70.0% | |
CTCCCGCATACGCAGGGTCC+GGG | + | chr5_4:56277173-56277192 | Msa0858670:intron | 70.0% | |
CGCATACGCAGGGTCCGGGA+AGG | + | chr5_4:56277177-56277196 | Msa0858670:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 56271850 | 56286986 | 56271850 | ID=Msa0858670;Name=Msa0858670 |
chr5_4 | mRNA | 56271850 | 56286986 | 56271850 | ID=Msa0858670-mRNA-1;Parent=Msa0858670;Name=Msa0858670-mRNA-1;_AED=0.12;_eAED=0.12;_QI=192|0.91|0.87|1|0.95|0.95|24|249|1103 |
chr5_4 | exon | 56271850 | 56272089 | 56271850 | ID=Msa0858670-mRNA-1:exon:17161;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56272283 | 56272416 | 56272283 | ID=Msa0858670-mRNA-1:exon:17162;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56273020 | 56273104 | 56273020 | ID=Msa0858670-mRNA-1:exon:17163;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56273390 | 56273443 | 56273390 | ID=Msa0858670-mRNA-1:exon:17164;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56273664 | 56273755 | 56273664 | ID=Msa0858670-mRNA-1:exon:17165;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56273863 | 56273966 | 56273863 | ID=Msa0858670-mRNA-1:exon:17166;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56275873 | 56275980 | 56275873 | ID=Msa0858670-mRNA-1:exon:17167;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56278402 | 56278808 | 56278402 | ID=Msa0858670-mRNA-1:exon:17168;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56279513 | 56279848 | 56279513 | ID=Msa0858670-mRNA-1:exon:17169;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56280189 | 56280395 | 56280189 | ID=Msa0858670-mRNA-1:exon:17170;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56280544 | 56280642 | 56280544 | ID=Msa0858670-mRNA-1:exon:17171;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56280727 | 56280799 | 56280727 | ID=Msa0858670-mRNA-1:exon:17172;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56281746 | 56281873 | 56281746 | ID=Msa0858670-mRNA-1:exon:17173;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56281995 | 56282286 | 56281995 | ID=Msa0858670-mRNA-1:exon:17174;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56282358 | 56282578 | 56282358 | ID=Msa0858670-mRNA-1:exon:17175;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56282657 | 56282781 | 56282657 | ID=Msa0858670-mRNA-1:exon:17176;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56283722 | 56283839 | 56283722 | ID=Msa0858670-mRNA-1:exon:17177;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56284876 | 56284931 | 56284876 | ID=Msa0858670-mRNA-1:exon:17178;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56285277 | 56285370 | 56285277 | ID=Msa0858670-mRNA-1:exon:17179;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56285453 | 56285636 | 56285453 | ID=Msa0858670-mRNA-1:exon:17180;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56285725 | 56285790 | 56285725 | ID=Msa0858670-mRNA-1:exon:17181;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56285865 | 56285974 | 56285865 | ID=Msa0858670-mRNA-1:exon:17182;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56286050 | 56286112 | 56286050 | ID=Msa0858670-mRNA-1:exon:17183;Parent=Msa0858670-mRNA-1 |
chr5_4 | exon | 56286630 | 56286986 | 56286630 | ID=Msa0858670-mRNA-1:exon:17184;Parent=Msa0858670-mRNA-1 |
chr5_4 | five_prime_UTR | 56271850 | 56272041 | 56271850 | ID=Msa0858670-mRNA-1:five_prime_utr;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56272042 | 56272089 | 56272042 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56272283 | 56272416 | 56272283 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56273020 | 56273104 | 56273020 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56273390 | 56273443 | 56273390 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56273664 | 56273755 | 56273664 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56273863 | 56273966 | 56273863 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56275873 | 56275980 | 56275873 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56278402 | 56278808 | 56278402 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56279513 | 56279848 | 56279513 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56280189 | 56280395 | 56280189 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56280544 | 56280642 | 56280544 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56280727 | 56280799 | 56280727 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56281746 | 56281873 | 56281746 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56281995 | 56282286 | 56281995 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56282358 | 56282578 | 56282358 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56282657 | 56282781 | 56282657 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56283722 | 56283839 | 56283722 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56284876 | 56284931 | 56284876 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56285277 | 56285370 | 56285277 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56285453 | 56285636 | 56285453 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56285725 | 56285790 | 56285725 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56285865 | 56285974 | 56285865 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56286050 | 56286112 | 56286050 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | CDS | 56286630 | 56286737 | 56286630 | ID=Msa0858670-mRNA-1:cds;Parent=Msa0858670-mRNA-1 |
chr5_4 | three_prime_UTR | 56286738 | 56286986 | 56286738 | ID=Msa0858670-mRNA-1:three_prime_utr;Parent=Msa0858670-mRNA-1 |
Gene Sequence |
Protein sequence |