AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0858780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0858780 MtrunA17_Chr5g0437321 89.701 301 16 4 27 325 1 288 1.60e-176 490
Msa0858780 MtrunA17_Chr4g0053431 69.369 111 34 0 47 157 2 112 5.42e-52 172
Msa0858780 MtrunA17_Chr5g0401731 38.667 300 148 7 47 318 12 303 7.82e-52 174
Msa0858780 MtrunA17_Chr3g0133601 71.154 104 30 0 47 150 34 137 1.23e-50 167
Msa0858780 MtrunA17_Chr4g0008551 73.786 103 27 0 48 150 36 138 4.01e-50 170
Msa0858780 MtrunA17_Chr6g0454921 65.138 109 38 0 47 155 12 120 1.54e-47 159
Msa0858780 MtrunA17_Chr3g0125801 48.696 115 59 0 37 151 3 117 2.17e-34 127
Msa0858780 MtrunA17_Chr3g0139671 43.357 143 72 2 45 178 80 222 2.46e-34 133
Msa0858780 MtrunA17_Chr6g0460671 47.748 111 58 0 49 159 98 208 2.61e-33 125
Msa0858780 MtrunA17_Chr6g0480581 48.246 114 57 1 50 161 4 117 2.62e-33 123
Msa0858780 MtrunA17_Chr1g0157731 43.182 132 73 1 45 174 86 217 1.00e-32 128
Msa0858780 MtrunA17_Chr6g0460661 41.322 121 71 0 39 159 5 125 2.10e-32 118
Msa0858780 MtrunA17_Chr5g0417621 47.015 134 63 3 25 150 101 234 2.63e-32 124
Msa0858780 MtrunA17_Chr7g0238631 46.341 123 62 1 45 167 108 226 3.34e-32 125
Msa0858780 MtrunA17_Chr3g0117511 52.885 104 49 0 49 152 182 285 6.25e-32 124
Msa0858780 MtrunA17_Chr4g0042501 45.528 123 64 1 31 150 83 205 8.05e-31 120
Msa0858780 MtrunA17_Chr7g0254261 51.485 101 49 0 50 150 89 189 2.62e-30 117
Msa0858780 MtrunA17_Chr4g0058991 51.923 104 50 0 49 152 208 311 3.39e-30 119
Msa0858780 MtrunA17_Chr7g0228531 50.962 104 50 1 49 152 219 321 9.47e-30 117
Msa0858780 MtrunA17_Chr5g0397841 50.000 100 50 0 45 144 105 204 1.38e-29 117
Msa0858780 MtrunA17_Chr5g0429661 47.115 104 55 0 49 152 121 224 4.77e-29 114
Msa0858780 MtrunA17_Chr5g0417821 43.077 130 71 2 50 178 9 136 1.39e-28 111
Msa0858780 MtrunA17_Chr8g0349261 44.715 123 62 4 50 169 15 134 2.80e-28 111
Msa0858780 MtrunA17_Chr3g0103281 36.970 165 94 4 47 209 10 166 2.98e-28 111
Msa0858780 MtrunA17_Chr8g0354661 48.673 113 55 2 50 160 39 150 1.47e-27 112
Msa0858780 MtrunA17_Chr1g0180391 46.729 107 54 2 46 150 17 122 2.42e-27 107
Msa0858780 MtrunA17_Chr3g0080861 42.466 146 75 5 22 160 7 150 3.47e-27 111
Msa0858780 MtrunA17_Chr8g0334881 50.926 108 49 3 50 155 12 117 1.35e-26 107
Msa0858780 MtrunA17_Chr7g0228481 51.000 100 48 1 49 148 219 317 1.52e-26 108
Msa0858780 MtrunA17_Chr8g0385321 45.763 118 59 3 50 165 14 128 1.57e-26 106
Msa0858780 MtrunA17_Chr3g0088461 50.980 102 49 1 50 150 24 125 1.65e-26 107
Msa0858780 MtrunA17_Chr3g0099131 45.946 111 59 1 50 159 43 153 2.25e-26 109
Msa0858780 MtrunA17_Chr2g0281071 42.735 117 64 2 50 165 15 129 2.47e-26 107
Msa0858780 MtrunA17_Chr5g0410961 44.800 125 63 4 43 165 8 128 3.00e-26 106
Msa0858780 MtrunA17_Chr4g0022881 47.706 109 53 3 43 149 8 114 4.08e-26 103
Msa0858780 MtrunA17_Chr4g0048511 42.623 122 66 3 45 165 11 129 4.66e-26 106
Msa0858780 MtrunA17_Chr4g0044421 45.714 105 56 1 47 150 11 115 5.09e-26 102
Msa0858780 MtrunA17_Chr2g0328771 46.429 112 59 1 50 160 22 133 5.82e-26 105
Msa0858780 MtrunA17_Chr7g0254411 46.429 112 59 1 50 160 14 125 8.27e-26 105
Msa0858780 MtrunA17_Chr5g0435101 47.059 102 53 1 50 150 13 114 9.73e-26 102
Msa0858780 MtrunA17_Chr4g0068061 43.443 122 68 1 50 170 14 135 1.10e-25 105
Msa0858780 MtrunA17_Chr3g0131121 38.732 142 72 4 50 177 14 154 1.11e-25 103
Msa0858780 MtrunA17_Chr1g0193801 46.610 118 58 3 50 165 14 128 1.32e-25 105
Msa0858780 MtrunA17_Chr7g0217741 41.463 123 69 2 50 171 14 134 1.38e-25 103
Msa0858780 MtrunA17_Chr5g0395281 45.600 125 62 4 43 165 8 128 1.52e-25 103
Msa0858780 MtrunA17_Chr1g0203411 43.363 113 63 1 50 161 14 126 1.53e-25 103
Msa0858780 MtrunA17_Chr1g0193371 50.485 103 48 2 50 150 14 115 1.66e-25 105
Msa0858780 MtrunA17_Chr4g0013361 46.400 125 60 4 44 166 6 125 1.85e-25 103
Msa0858780 MtrunA17_Chr4g0030881 41.176 119 62 2 50 160 9 127 2.14e-25 102
Msa0858780 MtrunA17_Chr2g0323411 43.548 124 66 3 43 165 8 128 3.00e-25 103
Msa0858780 MtrunA17_Chr4g0032401 43.548 124 69 1 38 160 7 130 3.50e-25 103
Msa0858780 MtrunA17_Chr5g0441131 44.643 112 60 2 47 156 8 119 3.77e-25 99.8
Msa0858780 MtrunA17_Chr5g0440781 44.444 117 60 3 47 161 11 124 4.61e-25 99.8
Msa0858780 MtrunA17_Chr8g0387421 48.624 109 52 3 45 150 8 115 7.42e-25 102
Msa0858780 MtrunA17_Chr4g0037141 46.602 103 52 2 50 150 14 115 8.33e-25 101
Msa0858780 MtrunA17_Chr4g0022891 47.222 108 53 3 43 148 8 113 9.27e-25 100
Msa0858780 MtrunA17_Chr1g0168661 45.631 103 53 2 50 150 23 124 1.05e-24 100
Msa0858780 MtrunA17_Chr7g0270891 45.763 118 59 3 50 165 14 128 1.25e-24 102
Msa0858780 MtrunA17_Chr4g0039971 44.882 127 64 4 43 167 9 131 1.26e-24 102
Msa0858780 MtrunA17_Chr6g0452271 40.323 124 68 4 50 171 14 133 1.35e-24 102
Msa0858780 MtrunA17_Chr1g0186061 46.602 103 52 2 50 150 22 123 1.38e-24 100
Msa0858780 MtrunA17_Chr3g0115821 34.940 166 101 5 43 206 8 168 2.38e-24 101
Msa0858780 MtrunA17_Chr2g0309911 44.660 103 54 2 50 150 13 114 2.39e-24 100
Msa0858780 MtrunA17_Chr4g0022901 45.631 103 53 2 50 150 15 116 2.48e-24 100
Msa0858780 MtrunA17_Chr4g0022911 46.602 103 52 2 50 150 15 116 2.89e-24 100
Msa0858780 MtrunA17_Chr4g0058631 38.125 160 89 5 50 202 14 170 3.41e-24 101
Msa0858780 MtrunA17_Chr5g0440761 44.444 117 60 3 47 161 11 124 3.92e-24 99.4
Msa0858780 MtrunA17_Chr4g0055981 42.718 103 56 2 50 150 57 158 4.03e-24 98.6
Msa0858780 MtrunA17_Chr5g0441141 44.444 117 60 3 47 161 11 124 4.60e-24 99.4
Msa0858780 MtrunA17_Chr2g0330041 46.789 109 54 3 45 150 8 115 4.62e-24 101
Msa0858780 MtrunA17_Chr2g0327821 44.660 103 54 2 50 150 8 109 5.01e-24 98.2
Msa0858780 MtrunA17_Chr1g0151941 39.552 134 72 5 47 172 10 142 5.28e-24 98.6
Msa0858780 MtrunA17_Chr5g0397231 50.962 104 47 3 45 145 8 110 5.38e-24 100
Msa0858780 MtrunA17_Chr1g0194951 40.945 127 71 3 50 175 14 137 6.15e-24 100
Msa0858780 MtrunA17_Chr3g0135311 46.602 103 53 2 50 150 14 116 1.02e-23 99.8
Msa0858780 MtrunA17_Chr1g0154031 48.148 108 53 2 50 155 78 184 1.08e-23 100
Msa0858780 MtrunA17_Chr4g0022931 44.660 103 54 2 50 150 15 116 1.10e-23 98.2
Msa0858780 MtrunA17_Chr1g0211161 41.667 120 65 3 50 167 15 131 1.20e-23 97.1
Msa0858780 MtrunA17_Chr4g0057031 40.678 118 65 3 50 165 14 128 1.36e-23 97.8
Msa0858780 MtrunA17_Chr8g0342541 46.789 109 54 3 45 150 8 115 1.36e-23 99.4
Msa0858780 MtrunA17_Chr7g0275911 44.118 102 56 1 50 150 14 115 1.55e-23 97.4
Msa0858780 MtrunA17_Chr3g0117091 41.463 123 67 3 50 170 14 133 1.60e-23 99.4
Msa0858780 MtrunA17_Chr7g0228891 41.129 124 65 4 47 165 8 128 1.66e-23 97.8
Msa0858780 MtrunA17_Chr1g0177901 46.875 96 51 0 61 156 5 100 1.80e-23 96.3
Msa0858780 MtrunA17_Chr7g0247131 55.844 77 32 1 76 150 5 81 2.07e-23 97.4
Msa0858780 MtrunA17_Chr2g0322521 45.000 120 65 1 50 168 31 150 2.53e-23 99.4
Msa0858780 MtrunA17_Chr6g0453471 41.463 123 66 3 47 165 8 128 2.95e-23 98.6
Msa0858780 MtrunA17_Chr8g0342521 47.706 109 53 3 45 150 8 115 3.88e-23 98.2
Msa0858780 MtrunA17_Chr4g0042671 41.026 117 66 2 50 165 14 128 7.55e-23 98.2
Msa0858780 MtrunA17_Chr7g0233061 46.000 100 52 1 49 148 179 276 8.54e-23 97.4
Msa0858780 MtrunA17_Chr4g0060721 46.078 102 54 1 50 150 15 116 9.08e-23 96.7
Msa0858780 MtrunA17_Chr8g0346561 45.098 102 55 1 50 150 14 115 1.27e-22 95.9
Msa0858780 MtrunA17_Chr7g0274581 42.718 103 56 2 50 150 14 115 1.39e-22 93.6
Msa0858780 MtrunA17_Chr8g0343831 44.118 102 56 1 50 150 10 111 1.61e-22 94.7
Msa0858780 MtrunA17_Chr2g0323351 44.037 109 57 3 43 149 8 114 1.93e-22 94.4
Msa0858780 MtrunA17_Chr1g0203441 44.444 108 57 2 50 155 15 121 1.95e-22 94.7
Msa0858780 MtrunA17_Chr5g0400821 44.660 103 55 2 50 150 14 116 2.60e-22 95.1
Msa0858780 MtrunA17_Chr7g0228231 42.478 113 62 2 44 154 10 121 3.47e-22 92.4
Msa0858780 MtrunA17_Chr3g0110351 40.496 121 64 4 47 162 8 125 4.00e-22 94.7
Msa0858780 MtrunA17_Chr3g0092401 46.078 102 54 1 50 150 15 116 4.04e-22 94.7
Msa0858780 MtrunA17_Chr7g0228401 51.136 88 43 0 61 148 290 377 6.23e-22 96.3
Msa0858780 MtrunA17_Chr7g0217221 43.636 110 58 3 43 150 8 115 7.03e-22 93.2
Msa0858780 MtrunA17_Chr1g0209661 38.938 113 66 2 40 150 19 130 7.17e-22 94.0
Msa0858780 MtrunA17_Chr5g0434571 38.462 130 72 4 41 165 38 164 7.24e-22 94.7
Msa0858780 MtrunA17_Chr7g0261281 44.660 103 54 2 50 150 14 115 7.93e-22 93.2
Msa0858780 MtrunA17_Chr6g0453211 47.115 104 53 2 43 145 8 110 8.28e-22 94.0
Msa0858780 MtrunA17_Chr1g0167691 44.118 102 56 1 50 150 14 115 9.01e-22 92.4
Msa0858780 MtrunA17_Chr1g0152011 44.660 103 55 2 50 150 14 116 9.27e-22 94.0
Msa0858780 MtrunA17_Chr4g0072751 48.980 98 48 2 50 145 14 111 9.64e-22 94.4
Msa0858780 MtrunA17_Chr1g0187761 43.689 103 55 2 50 150 14 115 1.18e-21 92.4
Msa0858780 MtrunA17_Chr1g0167661 43.137 102 57 1 50 150 14 115 1.24e-21 92.0
Msa0858780 MtrunA17_Chr7g0271241 49.485 97 46 2 50 144 14 109 1.27e-21 94.4
Msa0858780 MtrunA17_Chr6g0487491 41.667 120 60 3 50 159 14 133 2.36e-21 91.7
Msa0858780 MtrunA17_Chr8g0342481 43.363 113 59 4 45 153 8 119 2.40e-21 93.6
Msa0858780 MtrunA17_Chr4g0070641 34.815 135 84 3 50 182 14 146 4.44e-21 88.6
Msa0858780 MtrunA17_Chr6g0470971 42.056 107 59 2 50 154 16 121 4.88e-21 91.3
Msa0858780 MtrunA17_Chr3g0121241 41.748 103 57 2 50 150 44 145 6.90e-21 91.3
Msa0858780 MtrunA17_Chr4g0070611 34.058 138 81 3 50 182 14 146 6.99e-21 91.3
Msa0858780 MtrunA17_Chr6g0450101 42.157 102 58 1 50 150 16 117 1.06e-20 88.6
Msa0858780 MtrunA17_Chr1g0192411 42.017 119 68 1 38 155 2 120 1.36e-20 91.7
Msa0858780 MtrunA17_Chr4g0028311 42.453 106 59 2 50 153 14 119 1.38e-20 90.5
Msa0858780 MtrunA17_Chr7g0264641 34.328 134 86 2 50 181 14 147 2.00e-20 89.4
Msa0858780 MtrunA17_Chr2g0311221 45.918 98 50 2 50 145 16 112 3.50e-20 89.4
Msa0858780 MtrunA17_Chr4g0054391 45.361 97 51 2 50 144 14 110 5.90e-20 88.2
Msa0858780 MtrunA17_Chr4g0068921 38.655 119 72 1 32 149 8 126 9.99e-20 85.5
Msa0858780 MtrunA17_Chr2g0327351 45.918 98 51 2 50 145 14 111 1.56e-19 87.4
Msa0858780 MtrunA17_Chr5g0434911 37.615 109 59 2 50 153 23 127 2.36e-19 86.3
Msa0858780 MtrunA17_Chr1g0194291 42.593 108 60 2 40 145 12 119 3.68e-19 85.5
Msa0858780 MtrunA17_Chr5g0434831 37.736 106 57 2 50 150 9 110 4.41e-19 83.6
Msa0858780 MtrunA17_Chr7g0269831 49.020 102 51 1 50 150 14 115 4.80e-19 86.7
Msa0858780 MtrunA17_Chr5g0434931 35.780 109 61 2 50 153 37 141 7.90e-19 85.1
Msa0858780 MtrunA17_Chr1g0194301 43.750 96 51 2 50 143 35 129 8.15e-19 84.7
Msa0858780 MtrunA17_Chr8g0360111 41.748 103 51 2 50 147 27 125 8.84e-19 84.3
Msa0858780 MtrunA17_Chr5g0434841 38.679 106 56 2 50 150 22 123 2.18e-18 84.3
Msa0858780 MtrunA17_Chr7g0220341 37.963 108 56 2 50 150 27 130 2.63e-18 83.2
Msa0858780 MtrunA17_Chr3g0093811 41.573 89 50 1 83 171 18 104 5.91e-18 82.4
Msa0858780 MtrunA17_Chr2g0293911 41.463 123 68 3 29 149 6 126 6.48e-18 83.2
Msa0858780 MtrunA17_Chr7g0240821 37.383 107 64 2 52 156 5 110 1.82e-17 80.1
Msa0858780 MtrunA17_Chr7g0228991 37.255 102 63 1 50 150 31 132 1.92e-17 80.9
Msa0858780 MtrunA17_Chr3g0099141 43.373 83 46 1 50 131 42 124 5.93e-17 76.6
Msa0858780 MtrunA17_Chr8g0362231 35.000 100 64 1 52 151 24 122 7.84e-17 80.9
Msa0858780 MtrunA17_Chr5g0416341 32.075 106 71 1 52 156 28 133 8.96e-17 80.9
Msa0858780 MtrunA17_Chr5g0425591 42.857 84 46 2 47 128 8 91 5.70e-15 69.7
Msa0858780 MtrunA17_Chr7g0233151 65.217 46 16 0 105 150 6 51 2.02e-14 70.5
Msa0858780 MtrunA17_Chr5g0434901 45.455 66 36 0 83 148 9 74 2.16e-14 68.9
Msa0858780 MtrunA17_Chr7g0229101 46.970 66 35 0 83 148 8 73 3.76e-14 70.5
Msa0858780 MtrunA17_Chr4g0042611 42.105 76 41 2 50 123 14 88 4.63e-14 67.0
Msa0858780 MtrunA17_Chr6g0453751 36.937 111 59 4 28 128 1 110 8.40e-14 67.4
Msa0858780 MtrunA17_Chr7g0229131 43.284 67 38 0 83 149 8 74 2.48e-13 67.4
Msa0858780 MtrunA17_Chr2g0323321 38.000 100 58 3 43 140 7 104 2.75e-13 65.5
Msa0858780 MtrunA17_Chr2g0294811 40.476 84 47 2 50 131 14 96 8.90e-13 64.3
Msa0858780 MtrunA17_Chr7g0238651 37.234 94 56 1 53 143 10 103 1.10e-12 68.2
Msa0858780 MtrunA17_Chr5g0395221 43.421 76 40 2 50 123 14 88 2.06e-12 62.4
Msa0858780 MtrunA17_Chr8g0342511 43.210 81 42 3 45 122 8 87 6.16e-12 61.2
Msa0858780 MtrunA17_Chr7g0233161 44.615 65 36 0 37 101 286 350 1.02e-11 65.1
Msa0858780 MtrunA17_Chr8g0342531 42.169 83 44 3 45 124 8 89 1.51e-11 62.0
Msa0858780 MtrunA17_Chr3g0104501 49.057 53 27 0 49 101 132 184 2.82e-11 62.0
Msa0858780 MtrunA17_Chr3g0104491 42.188 64 37 0 109 172 26 89 5.37e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0858780 AT3G50060.1 64.706 119 38 1 46 164 2 116 1.47e-49 167
Msa0858780 AT3G09230.1 71.154 104 30 0 47 150 52 155 1.72e-47 164
Msa0858780 AT3G55730.1 70.874 103 30 0 48 150 54 156 3.19e-47 164
Msa0858780 AT5G67300.1 68.571 105 33 0 46 150 2 106 7.39e-47 160
Msa0858780 AT4G37260.1 68.224 107 34 0 44 150 7 113 9.61e-47 160
Msa0858780 AT2G23290.1 70.192 104 31 0 47 150 10 113 1.63e-46 160
Msa0858780 AT2G39880.1 61.538 117 42 1 34 150 37 150 2.54e-45 158
Msa0858780 AT1G73410.1 53.465 101 47 0 50 150 6 106 6.63e-34 125
Msa0858780 AT1G73410.2 53.465 101 47 0 50 150 6 106 8.08e-34 123
Msa0858780 AT3G09370.2 45.522 134 69 1 45 178 130 259 2.14e-33 129
Msa0858780 AT3G09370.1 45.522 134 69 1 45 178 125 254 2.29e-33 129
Msa0858780 AT3G09370.3 45.522 134 69 1 45 178 138 267 2.40e-33 129
Msa0858780 AT1G17950.1 50.495 101 50 0 50 150 5 105 3.75e-33 123
Msa0858780 AT4G33450.1 40.645 155 79 3 50 202 19 162 4.84e-33 123
Msa0858780 AT5G02320.3 46.400 125 63 1 45 169 62 182 6.50e-33 127
Msa0858780 AT5G02320.1 46.400 125 63 1 45 169 122 242 9.35e-33 127
Msa0858780 AT5G02320.2 46.400 125 63 1 45 169 122 242 9.35e-33 127
Msa0858780 AT5G17800.1 54.455 101 46 0 50 150 93 193 1.14e-32 124
Msa0858780 AT4G32730.5 46.903 113 60 0 45 157 82 194 8.61e-31 123
Msa0858780 AT4G32730.4 46.903 113 60 0 45 157 82 194 8.61e-31 123
Msa0858780 AT4G32730.3 46.903 113 60 0 45 157 82 194 8.61e-31 123
Msa0858780 AT4G32730.2 46.903 113 60 0 45 157 82 194 8.61e-31 123
Msa0858780 AT4G32730.1 46.903 113 60 0 45 157 82 194 9.06e-31 123
Msa0858780 AT5G11510.3 42.478 113 65 0 45 157 76 188 1.07e-30 122
Msa0858780 AT5G11510.1 42.478 113 65 0 45 157 76 188 1.07e-30 122
Msa0858780 AT5G11510.4 42.478 113 65 0 45 157 76 188 1.07e-30 122
Msa0858780 AT1G69560.1 42.857 126 63 1 50 166 107 232 1.08e-30 118
Msa0858780 AT5G11510.2 42.478 113 65 0 45 157 76 188 1.35e-30 122
Msa0858780 AT5G11510.5 42.478 113 65 0 45 157 76 188 1.44e-30 122
Msa0858780 AT5G11050.1 48.077 104 54 0 49 152 104 207 1.50e-30 120
Msa0858780 AT1G69560.2 40.741 135 71 1 41 166 114 248 1.89e-30 118
Msa0858780 AT5G58850.1 47.059 102 54 0 49 150 104 205 2.94e-30 119
Msa0858780 AT4G18770.1 50.980 102 50 0 49 150 216 317 5.08e-30 118
Msa0858780 AT1G26780.1 49.505 101 51 0 50 150 98 198 5.37e-30 115
Msa0858780 AT1G26780.2 49.505 101 51 0 50 150 98 198 1.43e-29 116
Msa0858780 AT5G40360.1 47.368 114 57 1 50 160 158 271 4.30e-29 115
Msa0858780 AT4G26930.1 46.457 127 62 2 40 160 6 132 1.32e-28 114
Msa0858780 AT4G00540.2 52.885 104 46 1 50 150 103 206 1.76e-28 114
Msa0858780 AT5G56110.1 40.458 131 75 2 50 179 14 142 2.12e-28 112
Msa0858780 AT3G27785.1 49.123 114 55 1 49 159 188 301 2.69e-28 114
Msa0858780 AT4G00540.1 52.885 104 46 1 50 150 101 204 4.08e-28 113
Msa0858780 AT1G74430.1 45.455 121 63 2 50 169 14 132 5.23e-28 110
Msa0858780 AT3G29020.1 46.535 101 54 0 50 150 65 165 8.11e-28 108
Msa0858780 AT5G06100.1 38.621 145 78 2 27 160 1 145 8.63e-28 112
Msa0858780 AT4G28110.1 45.161 124 64 3 43 165 8 128 1.15e-27 109
Msa0858780 AT3G53200.1 49.057 106 51 2 50 153 11 115 1.22e-27 108
Msa0858780 AT2G32460.1 49.533 107 53 1 50 155 20 126 1.38e-27 112
Msa0858780 AT2G32460.2 49.533 107 53 1 50 155 8 114 1.47e-27 112
Msa0858780 AT3G08500.1 48.276 116 58 2 37 150 18 133 1.67e-27 110
Msa0858780 AT5G06100.5 38.621 145 78 2 27 160 1 145 1.78e-27 112
Msa0858780 AT5G06100.2 38.621 145 78 2 27 160 1 145 1.78e-27 112
Msa0858780 AT5G06100.3 38.621 145 78 2 27 160 1 145 1.78e-27 112
Msa0858780 AT5G06100.4 38.621 145 78 2 27 160 1 145 1.78e-27 112
Msa0858780 AT3G11440.2 44.828 116 63 1 50 164 43 158 1.79e-27 112
Msa0858780 AT3G29020.2 46.535 101 54 0 50 150 67 167 1.91e-27 109
Msa0858780 AT3G61250.1 42.748 131 69 4 50 177 14 141 2.91e-27 108
Msa0858780 AT3G11440.3 44.828 116 63 1 50 164 43 158 4.40e-27 111
Msa0858780 AT3G11440.4 44.828 116 63 1 50 164 43 158 4.40e-27 111
Msa0858780 AT3G11440.1 44.828 116 63 1 50 164 43 158 4.40e-27 111
Msa0858780 AT4G01680.3 47.826 115 55 3 50 162 14 125 1.09e-26 105
Msa0858780 AT5G12870.1 49.020 102 51 1 50 150 20 121 2.14e-26 106
Msa0858780 AT5G55020.1 48.214 112 57 1 50 160 28 139 2.25e-26 109
Msa0858780 AT1G18710.1 42.857 119 65 2 50 167 14 130 3.87e-26 105
Msa0858780 AT3G46130.1 44.167 120 63 3 44 161 6 123 5.11e-26 104
Msa0858780 AT4G38620.1 49.515 103 49 2 50 150 14 115 5.41e-26 105
Msa0858780 AT4G01680.1 47.826 115 55 3 50 162 14 125 6.42e-26 105
Msa0858780 AT3G30210.1 45.794 107 55 2 50 154 29 134 7.56e-26 104
Msa0858780 AT5G10280.1 44.000 125 64 4 43 165 8 128 7.69e-26 105
Msa0858780 AT4G34990.1 44.068 118 61 3 50 165 14 128 8.14e-26 104
Msa0858780 AT2G16720.1 45.217 115 58 3 50 162 14 125 8.18e-26 104
Msa0858780 AT5G59780.3 42.982 114 62 2 50 161 10 122 8.66e-26 103
Msa0858780 AT5G14750.1 43.478 115 62 2 38 150 6 119 1.04e-25 102
Msa0858780 AT4G05100.1 43.089 123 66 3 44 165 10 129 1.46e-25 104
Msa0858780 AT1G35515.1 44.118 102 56 1 50 150 14 115 1.65e-25 102
Msa0858780 AT3G13890.2 38.889 144 84 3 45 185 8 150 1.83e-25 105
Msa0858780 AT5G60890.1 46.602 103 52 2 50 150 14 115 2.01e-25 103
Msa0858780 AT1G18570.1 44.348 115 59 3 50 162 15 126 2.18e-25 104
Msa0858780 AT5G16770.4 44.000 125 64 4 43 165 8 128 2.44e-25 103
Msa0858780 AT5G16770.3 44.000 125 64 4 43 165 8 128 2.44e-25 103
Msa0858780 AT2G26960.1 45.082 122 61 3 39 155 8 128 2.57e-25 105
Msa0858780 AT4G09460.1 48.544 103 50 2 50 150 14 115 3.11e-25 102
Msa0858780 AT1G74080.1 45.098 102 53 2 50 149 14 114 3.37e-25 103
Msa0858780 AT5G16770.1 44.000 125 64 4 43 165 8 128 4.11e-25 103
Msa0858780 AT5G16770.2 44.000 125 64 4 43 165 8 128 4.11e-25 103
Msa0858780 AT4G21440.1 42.742 124 67 3 43 165 8 128 4.37e-25 103
Msa0858780 AT1G57560.1 44.068 118 61 3 50 165 14 128 5.07e-25 103
Msa0858780 AT1G57560.2 44.068 118 61 3 50 165 14 128 5.45e-25 102
Msa0858780 AT3G60460.1 48.148 108 52 3 50 155 13 118 5.59e-25 102
Msa0858780 AT5G07690.1 44.068 118 61 3 50 165 14 128 5.84e-25 103
Msa0858780 AT5G61420.2 42.623 122 65 3 50 169 14 132 6.36e-25 103
Msa0858780 AT5G40330.1 39.844 128 69 3 50 170 14 140 6.42e-25 100
Msa0858780 AT1G09540.1 48.544 103 50 2 50 150 14 115 6.56e-25 103
Msa0858780 AT1G22640.1 46.602 103 52 2 50 150 14 115 7.44e-25 101
Msa0858780 AT2G25230.1 41.071 112 66 0 50 161 26 137 8.00e-25 100
Msa0858780 AT4G17785.2 38.889 144 77 4 43 178 8 148 8.36e-25 103
Msa0858780 AT4G13480.1 46.602 103 52 2 50 150 8 109 9.40e-25 101
Msa0858780 AT1G08810.1 49.020 102 51 1 50 150 14 115 1.22e-24 101
Msa0858780 AT3G28470.1 43.220 118 62 3 50 165 14 128 1.52e-24 101
Msa0858780 AT3G13890.1 37.500 152 84 3 45 185 8 159 1.63e-24 102
Msa0858780 AT3G27920.1 36.879 141 82 3 44 178 10 149 1.68e-24 99.8
Msa0858780 AT5G07700.1 43.220 118 62 3 50 165 14 128 1.73e-24 102
Msa0858780 AT5G07700.2 43.220 118 62 3 50 165 14 128 1.73e-24 102
Msa0858780 AT4G17785.1 38.889 144 77 4 43 178 8 148 1.73e-24 102
Msa0858780 AT1G25340.1 40.496 121 69 2 32 150 2 121 1.75e-24 100
Msa0858780 AT1G56160.1 46.667 105 53 2 50 152 16 119 1.80e-24 101
Msa0858780 AT3G02940.2 42.400 125 66 4 43 165 8 128 2.19e-24 101
Msa0858780 AT3G02940.1 42.400 125 66 4 43 165 8 128 3.45e-24 100
Msa0858780 AT3G02940.3 42.400 125 66 4 43 165 8 128 3.45e-24 100
Msa0858780 AT4G01680.2 43.307 127 55 3 50 162 14 137 3.56e-24 101
Msa0858780 AT1G63910.1 48.148 108 54 2 45 150 8 115 4.23e-24 101
Msa0858780 AT3G48920.1 49.020 102 49 2 50 149 20 120 4.40e-24 99.4
Msa0858780 AT5G65230.1 42.400 125 66 4 43 165 8 128 4.57e-24 100
Msa0858780 AT5G52600.1 39.850 133 70 4 50 173 14 145 5.14e-24 97.8
Msa0858780 AT3G12720.1 45.631 103 53 2 50 150 24 125 7.43e-24 99.8
Msa0858780 AT1G25340.2 40.909 110 61 1 41 150 11 116 7.89e-24 99.0
Msa0858780 AT1G25340.3 39.496 119 68 1 32 150 2 116 8.19e-24 99.8
Msa0858780 AT5G54230.1 41.176 119 67 2 50 167 14 130 8.97e-24 99.8
Msa0858780 AT3G24310.1 45.631 103 53 2 50 150 20 121 1.17e-23 98.6
Msa0858780 AT5G26660.1 41.732 127 69 3 50 174 14 137 1.23e-23 99.8
Msa0858780 AT1G16490.1 44.762 105 57 1 50 153 16 120 1.29e-23 98.6
Msa0858780 AT5G15310.2 41.880 117 65 2 50 165 14 128 1.59e-23 99.0
Msa0858780 AT5G15310.1 41.880 117 65 2 50 165 14 128 1.60e-23 99.4
Msa0858780 AT5G15310.4 41.880 117 65 2 50 165 14 128 2.29e-23 97.1
Msa0858780 AT3G01140.2 42.982 114 62 2 50 162 14 125 3.16e-23 98.6
Msa0858780 AT3G62610.1 42.241 116 66 1 50 164 14 129 3.51e-23 98.6
Msa0858780 AT3G01140.1 42.982 114 62 2 50 162 57 168 4.37e-23 99.0
Msa0858780 AT1G06180.1 45.631 103 53 2 50 150 14 115 5.13e-23 96.3
Msa0858780 AT4G12350.1 39.831 118 66 3 50 165 14 128 5.85e-23 97.1
Msa0858780 AT5G35550.1 45.631 103 53 2 50 150 16 117 6.89e-23 95.9
Msa0858780 AT1G34670.1 40.323 124 70 3 43 165 8 128 8.69e-23 97.8
Msa0858780 AT3G13540.1 39.200 125 73 2 50 173 25 147 1.01e-22 95.5
Msa0858780 AT5G39700.1 42.424 99 57 0 51 149 57 155 1.25e-22 93.6
Msa0858780 AT1G74650.1 46.078 102 54 1 50 150 14 115 1.35e-22 96.7
Msa0858780 AT5G62470.1 43.564 101 57 0 50 150 14 114 1.47e-22 97.1
Msa0858780 AT3G23250.1 43.689 103 55 2 50 150 14 115 1.50e-22 95.9
Msa0858780 AT2G47190.1 42.500 120 63 3 33 150 8 123 2.55e-22 94.7
Msa0858780 AT3G12820.1 45.631 103 53 2 50 150 16 117 2.82e-22 94.0
Msa0858780 AT4G22680.1 39.831 118 66 3 50 165 14 128 3.51e-22 94.4
Msa0858780 AT2G31180.1 42.056 107 61 1 50 155 14 120 4.12e-22 93.6
Msa0858780 AT5G49330.1 45.045 111 59 2 50 159 14 123 4.36e-22 95.5
Msa0858780 AT3G28910.1 44.954 109 58 2 43 150 8 115 4.76e-22 95.1
Msa0858780 AT3G53200.2 54.930 71 32 0 83 153 12 82 6.03e-22 92.0
Msa0858780 AT3G47600.1 45.098 102 55 1 50 150 14 115 7.33e-22 94.7
Msa0858780 AT1G79180.1 44.660 103 54 2 50 150 16 117 7.39e-22 94.0
Msa0858780 AT5G62470.2 45.098 102 55 1 50 150 14 115 9.36e-22 94.7
Msa0858780 AT1G66230.1 38.710 124 68 4 47 165 8 128 9.47e-22 93.6
Msa0858780 AT3G27810.1 43.443 122 61 3 50 169 22 137 1.31e-21 91.7
Msa0858780 AT4G37780.1 44.660 103 55 2 50 150 14 116 1.81e-21 93.2
Msa0858780 AT5G14340.1 38.983 118 67 3 50 165 26 140 2.28e-21 92.4
Msa0858780 AT2G36890.1 43.636 110 58 3 50 156 14 122 2.94e-21 92.4
Msa0858780 AT5G65790.1 44.660 103 55 2 50 150 14 116 3.35e-21 93.6
Msa0858780 AT2G36890.2 43.636 110 58 3 50 156 55 163 3.56e-21 92.8
Msa0858780 AT5G23000.1 38.028 142 77 5 50 183 14 152 5.47e-21 92.0
Msa0858780 AT2G47460.1 43.137 102 57 1 50 150 14 115 5.63e-21 92.8
Msa0858780 AT5G16600.1 39.516 124 67 4 47 165 8 128 6.37e-21 92.0
Msa0858780 AT5G40350.1 44.118 102 54 2 50 149 19 119 7.34e-21 89.4
Msa0858780 AT4G25560.1 43.689 103 55 2 50 150 12 113 8.06e-21 90.9
Msa0858780 AT5G52260.1 44.660 103 54 2 50 150 14 115 8.26e-21 90.5
Msa0858780 AT1G68320.1 40.777 103 58 2 50 150 21 122 8.62e-21 90.9
Msa0858780 AT5G40430.1 37.302 126 78 1 24 149 28 152 1.01e-20 90.1
Msa0858780 AT2G26950.1 42.593 108 51 3 49 151 17 118 1.03e-20 92.0
Msa0858780 AT5G59780.2 38.235 136 77 2 67 202 11 139 1.17e-20 89.0
Msa0858780 AT3G49690.1 43.689 103 56 2 50 150 14 116 1.24e-20 90.9
Msa0858780 AT3G01530.1 42.202 109 60 2 43 149 20 127 1.47e-20 88.6
Msa0858780 AT5G57620.1 43.689 103 56 2 50 150 14 116 3.29e-20 90.1
Msa0858780 AT3G46130.4 48.101 79 41 0 83 161 23 101 3.84e-20 88.2
Msa0858780 AT3G46130.3 48.101 79 41 0 83 161 13 91 4.46e-20 87.8
Msa0858780 AT5G14750.3 51.471 68 33 0 83 150 18 85 1.54e-19 84.7
Msa0858780 AT1G48000.1 40.594 101 59 1 50 149 34 134 3.83e-19 85.5
Msa0858780 AT5G26660.2 44.565 92 49 1 83 174 17 106 7.47e-19 85.9
Msa0858780 AT5G62320.1 40.541 111 54 3 50 150 15 123 2.28e-18 83.2
Msa0858780 AT3G27810.2 49.425 87 39 1 83 169 7 88 4.44e-18 80.9
Msa0858780 AT2G02820.3 34.343 99 65 0 52 150 32 130 6.64e-18 83.6
Msa0858780 AT3G12820.2 52.941 68 32 0 83 150 2 69 1.11e-17 80.1
Msa0858780 AT1G79180.2 34.074 135 55 1 50 150 16 150 1.13e-17 82.8
Msa0858780 AT5G35550.2 54.412 68 31 0 83 150 53 120 1.15e-17 81.6
Msa0858780 AT2G02820.1 34.343 99 65 0 52 150 32 130 1.96e-17 83.2
Msa0858780 AT2G02820.2 34.343 99 65 0 52 150 32 130 2.52e-17 82.8
Msa0858780 AT1G14350.2 34.343 99 65 0 52 150 27 125 3.39e-17 82.4
Msa0858780 AT1G14350.1 34.343 99 65 0 52 150 27 125 3.39e-17 82.4
Msa0858780 AT5G40350.2 52.239 67 32 0 83 149 8 74 3.82e-17 78.2
Msa0858780 AT3G06490.1 41.905 105 58 2 47 149 18 121 4.90e-17 80.9
Msa0858780 AT1G66370.1 31.159 138 82 4 50 179 10 142 2.14e-16 77.8
Msa0858780 AT1G66380.1 32.824 131 78 3 50 174 10 136 3.10e-16 74.7
Msa0858780 AT5G49620.1 38.889 108 65 1 43 149 21 128 4.38e-16 77.8
Msa0858780 AT3G47600.2 48.529 68 35 0 83 150 42 109 1.22e-15 77.0
Msa0858780 AT1G56650.1 31.111 135 78 3 50 173 10 140 4.31e-15 74.3
Msa0858780 AT3G18100.1 40.426 94 56 0 50 143 546 639 1.88e-14 74.7
Msa0858780 AT3G18100.3 40.426 94 56 0 50 143 498 591 1.91e-14 74.7
Msa0858780 AT3G18100.2 40.426 94 56 0 50 143 333 426 2.65e-14 73.9
Msa0858780 AT3G18100.4 40.426 94 56 0 50 143 385 478 2.68e-14 73.9
Msa0858780 AT1G66390.1 31.387 137 83 3 50 179 10 142 8.68e-14 70.5
Msa0858780 AT5G49620.2 34.426 122 65 2 43 149 21 142 9.79e-13 68.2
Msa0858780 AT1G71030.2 44.615 65 36 0 86 150 5 69 1.00e-12 66.2
Msa0858780 AT1G71030.1 44.615 65 36 0 86 150 19 83 1.35e-12 66.2
Msa0858780 AT1G66380.3 35.484 93 59 1 83 174 11 103 3.03e-12 62.8
Msa0858780 AT1G22640.3 49.123 57 29 0 94 150 2 58 3.60e-12 65.1
Msa0858780 AT5G14750.4 45.614 57 31 0 94 150 2 58 4.57e-12 63.2
Msa0858780 AT5G14750.2 45.614 57 31 0 94 150 2 58 4.57e-12 63.2
Msa0858780 AT1G18960.1 33.654 104 65 3 48 150 8 108 9.02e-12 65.5
Msa0858780 AT2G37630.1 35.354 99 61 1 48 143 2 100 1.16e-11 65.5
Msa0858780 AT5G59780.1 43.860 57 32 0 105 161 1 57 1.18e-11 62.8
Msa0858780 AT3G46130.2 45.614 57 31 0 105 161 1 57 1.43e-11 63.2

Find 80 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACGACGGTGATTATTATA+AGG 0.303478 5_4:-56555273 Msa0858780:CDS
CACTTTCGAAGTGTTGAATC+AGG 0.309175 5_4:+56554900 None:intergenic
TTATCCTCCGCCGGTGTAAA+AGG 0.319601 5_4:+56555545 None:intergenic
AACGGAATCCCCGGTCGTTC+TGG 0.325808 5_4:-56555623 Msa0858780:CDS
TTATAAACGTCCTTGTGTTA+TGG 0.349334 5_4:-56555228 Msa0858780:CDS
ATTGAAGCACATGCAGTTCA+TGG 0.355261 5_4:-56555515 Msa0858780:CDS
ACGATTTCTCGTCTTCTTCC+AGG 0.363590 5_4:-56555479 Msa0858780:CDS
GCATGATAGCAGAGGAAGTT+AGG 0.373360 5_4:-56554962 Msa0858780:CDS
GATGATGACGCAGGGAATAA+AGG 0.383743 5_4:-56555149 Msa0858780:CDS
ACCACCGTTTGAATTCGAAT+TGG 0.391041 5_4:+56555754 None:intergenic
GTGATAAAGTGAAGGGTTCA+TGG 0.407783 5_4:-56555718 Msa0858780:CDS
AGGAAAACGGTGCAAGAAAC+TGG 0.414736 5_4:-56555658 Msa0858780:CDS
ACCGGTGGAACCGTTGTAAC+CGG 0.417169 5_4:+56555377 None:intergenic
ATTCCCACCGGTGTGATAAC+CGG 0.422805 5_4:-56555314 Msa0858780:CDS
AGATGAAACATTGGTGAAAC+TGG 0.432466 5_4:-56555684 Msa0858780:CDS
CTTTGAACAACCGTTGCAAC+CGG 0.434972 5_4:+56555359 None:intergenic
ACGGAATCCCCGGTCGTTCT+GGG 0.435316 5_4:-56555622 Msa0858780:CDS
ATGCAGTTCATGGAAACAAA+TGG 0.435359 5_4:-56555505 Msa0858780:CDS
GATAACATGCGCCTTGGTGG+TGG 0.451447 5_4:-56554930 Msa0858780:CDS
AAGGGTTCCAACGGCGGTGC+CGG 0.461128 5_4:-56555339 Msa0858780:CDS
AACTCTCCGCCGACGTCGCA+CGG 0.462717 5_4:-56555420 Msa0858780:CDS
CGGTTGCAACGGTTGTTCAA+AGG 0.465093 5_4:-56555358 Msa0858780:CDS
GGTTGCAACGGTTGTTCAAA+GGG 0.473960 5_4:-56555357 Msa0858780:CDS
ATCACACCGGTGGGAATCAC+CGG 0.476511 5_4:+56555320 None:intergenic
GGCTCTAGCAGCGGTTTCAC+CGG 0.495443 5_4:-56555396 Msa0858780:CDS
TATAAGGATTTGTTGAGTCT+CGG 0.499886 5_4:-56555257 Msa0858780:CDS
GCAAGACTTCCCAGAACGAC+CGG 0.501357 5_4:+56555613 None:intergenic
GTCACGTGACGGTGAAGAAA+CGG 0.504415 5_4:-56555180 Msa0858780:CDS
ACCGGTTACAACGGTTCCAC+CGG 0.509986 5_4:-56555378 Msa0858780:CDS
AACGGTTCCACCGGTTGCAA+CGG 0.511374 5_4:-56555369 Msa0858780:CDS
ATAAAGGTGTTAACGTGGTT+AGG 0.512437 5_4:-56555133 Msa0858780:CDS
AATTCCAATTCGAATTCAAA+CGG 0.513949 5_4:-56555758 Msa0858780:CDS
TGCAGTTCATGGAAACAAAT+GGG 0.515010 5_4:-56555504 Msa0858780:CDS
GGAATCACCGGCACCGCCGT+TGG 0.524579 5_4:+56555332 None:intergenic
TCTTCTTCTTTCAGAAAACC+AGG 0.531221 5_4:+56555089 None:intergenic
GTTGATAACATGCGCCTTGG+TGG 0.538563 5_4:-56554933 Msa0858780:CDS
CAAGACTTCCCAGAACGACC+GGG 0.539420 5_4:+56555614 None:intergenic
GGAAGTCTTGCCGTCTGCGG+TGG 0.545828 5_4:-56555601 Msa0858780:CDS
TCGTTAAGTTTGTTTCCACC+TGG 0.549818 5_4:-56555107 Msa0858780:CDS
GTGATAAGCAACGGAATCCC+CGG 0.556212 5_4:-56555632 Msa0858780:CDS
TGAACAACCGTTGCAACCGG+TGG 0.559619 5_4:+56555362 None:intergenic
ATAACATGCGCCTTGGTGGT+GGG 0.567081 5_4:-56554929 Msa0858780:CDS
AAAGGAAGGTGTTGAACGGT+TGG 0.567448 5_4:+56555563 None:intergenic
AATTCGAATTCAAACGGTGG+TGG 0.570811 5_4:-56555752 Msa0858780:CDS
CTGGGAAGTCTTGCCGTCTG+CGG 0.576361 5_4:-56555604 Msa0858780:CDS
GAGAATAATAGCGGGTCACG+TGG 0.581994 5_4:-56555203 Msa0858780:CDS
TCGCACGGCGGCTCTAGCAG+CGG 0.583499 5_4:-56555405 Msa0858780:CDS
CCTCCGCCGGTGTAAAAGGA+AGG 0.589718 5_4:+56555549 None:intergenic
AACTGGTCTGTGATAAGCAA+CGG 0.591578 5_4:-56555641 Msa0858780:CDS
GTGAAACTGGTGAAGGAAAA+CGG 0.592557 5_4:-56555671 Msa0858780:CDS
ATTGCGTTATCTGTTCTACC+TGG 0.594559 5_4:+56555461 None:intergenic
TGTTCAAAGGGTTCCAACGG+CGG 0.597209 5_4:-56555345 Msa0858780:CDS
TATGTTGATAACATGCGCCT+TGG 0.597244 5_4:-56554936 Msa0858780:CDS
ATGATGATGTTATCCTCCGC+CGG 0.600301 5_4:+56555536 None:intergenic
TGAAAACGGTGATAAAGTGA+AGG 0.601532 5_4:-56555726 Msa0858780:CDS
GCTGATTACACCACCGCAGA+CGG 0.606009 5_4:+56555591 None:intergenic
GGTTGTTCAAAGGGTTCCAA+CGG 0.607530 5_4:-56555348 Msa0858780:CDS
AGCGGTTTCACCGGTTACAA+CGG 0.618288 5_4:-56555387 Msa0858780:CDS
GAAAACGGTGATAAAGTGAA+GGG 0.623051 5_4:-56555725 Msa0858780:CDS
AACGGTGGTGGTGATGAAAA+CGG 0.632028 5_4:-56555740 Msa0858780:CDS
GTTATGGTTGAGAATAATAG+CGG 0.638175 5_4:-56555212 Msa0858780:CDS
TTTCCGGTTATCACACCGGT+GGG 0.639604 5_4:+56555311 None:intergenic
TCTTCTTTCAGAAAACCAGG+TGG 0.639884 5_4:+56555092 None:intergenic
TTATGGTTGAGAATAATAGC+GGG 0.641955 5_4:-56555211 Msa0858780:CDS
GGGTCACGTGGGTCACGTGA+CGG 0.646108 5_4:-56555191 Msa0858780:CDS
TGTAAAAGGAAGGTGTTGAA+CGG 0.650810 5_4:+56555559 None:intergenic
AAGAACAGAAACAAACACGT+TGG 0.651382 5_4:-56556014 Msa0858780:CDS
AGAATAATAGCGGGTCACGT+GGG 0.660707 5_4:-56555202 Msa0858780:CDS
AACATTGGTGAAACTGGTGA+AGG 0.661429 5_4:-56555678 Msa0858780:CDS
TCCAATTCGAATTCAAACGG+TGG 0.661563 5_4:-56555755 Msa0858780:CDS
GTAACGGAAGATGATGACGC+AGG 0.670273 5_4:-56555158 Msa0858780:CDS
TAACGGAAGATGATGACGCA+GGG 0.671779 5_4:-56555157 Msa0858780:CDS
CAGGAGCAAACCCACCACCA+AGG 0.672680 5_4:+56554919 None:intergenic
TTATTCTCAACCATAACACA+AGG 0.679685 5_4:+56555218 None:intergenic
AAGACTTCCCAGAACGACCG+GGG 0.681485 5_4:+56555615 None:intergenic
TCTTCAGCGCATGATAGCAG+AGG 0.681841 5_4:-56554970 Msa0858780:CDS
TGACGGTGAAGAAACGGTAA+CGG 0.688161 5_4:-56555174 Msa0858780:CDS
CGTGTGAATGAAAGTTACGA+CGG 0.718108 5_4:-56555287 Msa0858780:CDS
AGGGAATAAAGGTGTTAACG+TGG 0.740809 5_4:-56555138 Msa0858780:CDS
TCTCCGCCGACGTCGCACGG+CGG 0.771881 5_4:-56555417 Msa0858780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTAATTGAAAGATATGAAT+TGG + chr5_4:56554983-56555002 None:intergenic 20.0%
!!! AATGATAATGATGATGATTA+TGG + chr5_4:56555049-56555068 None:intergenic 20.0%
!! TGTAATTGAAAGATATGAAT+TGG + chr5_4:56554983-56555002 None:intergenic 20.0%
!!! AATGATAATGATGATGATTA+TGG + chr5_4:56555049-56555068 None:intergenic 20.0%
!! ACACAACAAAAACAGTTTTA+AGG - chr5_4:56554943-56554962 Msa0858780:CDS 25.0%
!! TTTTCTGTTTTCTTTCTCTT+TGG - chr5_4:56555090-56555109 Msa0858780:CDS 25.0%
! AATTCCAATTCGAATTCAAA+CGG - chr5_4:56555158-56555177 Msa0858780:CDS 25.0%
! TAAAAACGAAGATGAAACAT+TGG - chr5_4:56555223-56555242 Msa0858780:CDS 25.0%
! ATAACGCAATAAAAAATCAC+TGG - chr5_4:56555468-56555487 Msa0858780:CDS 25.0%
! TACTGAAAAATGAGAAATTG+AGG - chr5_4:56555918-56555937 Msa0858780:intron 25.0%
!! ACACAACAAAAACAGTTTTA+AGG - chr5_4:56554943-56554962 Msa0858780:CDS 25.0%
!! TTTTCTGTTTTCTTTCTCTT+TGG - chr5_4:56555090-56555109 Msa0858780:CDS 25.0%
! AATTCCAATTCGAATTCAAA+CGG - chr5_4:56555158-56555177 Msa0858780:CDS 25.0%
! TAAAAACGAAGATGAAACAT+TGG - chr5_4:56555223-56555242 Msa0858780:CDS 25.0%
! ATAACGCAATAAAAAATCAC+TGG - chr5_4:56555468-56555487 Msa0858780:CDS 25.0%
! TACTGAAAAATGAGAAATTG+AGG - chr5_4:56555918-56555937 Msa0858780:intron 25.0%
! TCTTTGGTATTTTCACAAAC+AGG - chr5_4:56555106-56555125 Msa0858780:CDS 30.0%
TTACGACGGTGATTATTATA+AGG - chr5_4:56555643-56555662 Msa0858780:CDS 30.0%
!! TATAAGGATTTGTTGAGTCT+CGG - chr5_4:56555659-56555678 Msa0858780:CDS 30.0%
TTATAAACGTCCTTGTGTTA+TGG - chr5_4:56555688-56555707 Msa0858780:CDS 30.0%
TTATTCTCAACCATAACACA+AGG + chr5_4:56555701-56555720 None:intergenic 30.0%
GTTATGGTTGAGAATAATAG+CGG - chr5_4:56555704-56555723 Msa0858780:CDS 30.0%
TTATGGTTGAGAATAATAGC+GGG - chr5_4:56555705-56555724 Msa0858780:CDS 30.0%
GAAAAATGAGAAATTGAGGT+CGG - chr5_4:56555922-56555941 Msa0858780:intron 30.0%
! TCTTTGGTATTTTCACAAAC+AGG - chr5_4:56555106-56555125 Msa0858780:CDS 30.0%
TTACGACGGTGATTATTATA+AGG - chr5_4:56555643-56555662 Msa0858780:CDS 30.0%
!! TATAAGGATTTGTTGAGTCT+CGG - chr5_4:56555659-56555678 Msa0858780:CDS 30.0%
TTATAAACGTCCTTGTGTTA+TGG - chr5_4:56555688-56555707 Msa0858780:CDS 30.0%
TTATTCTCAACCATAACACA+AGG + chr5_4:56555701-56555720 None:intergenic 30.0%
GTTATGGTTGAGAATAATAG+CGG - chr5_4:56555704-56555723 Msa0858780:CDS 30.0%
TTATGGTTGAGAATAATAGC+GGG - chr5_4:56555705-56555724 Msa0858780:CDS 30.0%
GAAAAATGAGAAATTGAGGT+CGG - chr5_4:56555922-56555941 Msa0858780:intron 30.0%
AAGAACAGAAACAAACACGT+TGG - chr5_4:56554902-56554921 Msa0858780:CDS 35.0%
TGAAAACGGTGATAAAGTGA+AGG - chr5_4:56555190-56555209 Msa0858780:CDS 35.0%
GAAAACGGTGATAAAGTGAA+GGG - chr5_4:56555191-56555210 Msa0858780:CDS 35.0%
AGATGAAACATTGGTGAAAC+TGG - chr5_4:56555232-56555251 Msa0858780:CDS 35.0%
!! TGTAAAAGGAAGGTGTTGAA+CGG + chr5_4:56555360-56555379 None:intergenic 35.0%
ATGCAGTTCATGGAAACAAA+TGG - chr5_4:56555411-56555430 Msa0858780:CDS 35.0%
TGCAGTTCATGGAAACAAAT+GGG - chr5_4:56555412-56555431 Msa0858780:CDS 35.0%
! ACTTTCATTCACACGTTTTC+CGG + chr5_4:56555624-56555643 None:intergenic 35.0%
!! ATAAAGGTGTTAACGTGGTT+AGG - chr5_4:56555783-56555802 Msa0858780:CDS 35.0%
TCTTCTTCTTTCAGAAAACC+AGG + chr5_4:56555830-56555849 None:intergenic 35.0%
AAGAACAGAAACAAACACGT+TGG - chr5_4:56554902-56554921 Msa0858780:CDS 35.0%
TGAAAACGGTGATAAAGTGA+AGG - chr5_4:56555190-56555209 Msa0858780:CDS 35.0%
GAAAACGGTGATAAAGTGAA+GGG - chr5_4:56555191-56555210 Msa0858780:CDS 35.0%
AGATGAAACATTGGTGAAAC+TGG - chr5_4:56555232-56555251 Msa0858780:CDS 35.0%
!! TGTAAAAGGAAGGTGTTGAA+CGG + chr5_4:56555360-56555379 None:intergenic 35.0%
ATGCAGTTCATGGAAACAAA+TGG - chr5_4:56555411-56555430 Msa0858780:CDS 35.0%
TGCAGTTCATGGAAACAAAT+GGG - chr5_4:56555412-56555431 Msa0858780:CDS 35.0%
! ACTTTCATTCACACGTTTTC+CGG + chr5_4:56555624-56555643 None:intergenic 35.0%
!! ATAAAGGTGTTAACGTGGTT+AGG - chr5_4:56555783-56555802 Msa0858780:CDS 35.0%
TCTTCTTCTTTCAGAAAACC+AGG + chr5_4:56555830-56555849 None:intergenic 35.0%
TCCAATTCGAATTCAAACGG+TGG - chr5_4:56555161-56555180 Msa0858780:CDS 40.0%
ACCACCGTTTGAATTCGAAT+TGG + chr5_4:56555165-56555184 None:intergenic 40.0%
AATTCGAATTCAAACGGTGG+TGG - chr5_4:56555164-56555183 Msa0858780:CDS 40.0%
GTGATAAAGTGAAGGGTTCA+TGG - chr5_4:56555198-56555217 Msa0858780:CDS 40.0%
AACATTGGTGAAACTGGTGA+AGG - chr5_4:56555238-56555257 Msa0858780:CDS 40.0%
GTGAAACTGGTGAAGGAAAA+CGG - chr5_4:56555245-56555264 Msa0858780:CDS 40.0%
! AACTGGTCTGTGATAAGCAA+CGG - chr5_4:56555275-56555294 Msa0858780:CDS 40.0%
! TCAACACCTTCCTTTTACAC+CGG - chr5_4:56555361-56555380 Msa0858780:CDS 40.0%
ATTGAAGCACATGCAGTTCA+TGG - chr5_4:56555401-56555420 Msa0858780:CDS 40.0%
ATTGCGTTATCTGTTCTACC+TGG + chr5_4:56555458-56555477 None:intergenic 40.0%
CGTGTGAATGAAAGTTACGA+CGG - chr5_4:56555629-56555648 Msa0858780:CDS 40.0%
!! AGGGAATAAAGGTGTTAACG+TGG - chr5_4:56555778-56555797 Msa0858780:CDS 40.0%
! TCGTTAAGTTTGTTTCCACC+TGG - chr5_4:56555809-56555828 Msa0858780:intron 40.0%
TCTTCTTTCAGAAAACCAGG+TGG + chr5_4:56555827-56555846 None:intergenic 40.0%
!! TATGTTGATAACATGCGCCT+TGG - chr5_4:56555980-56555999 Msa0858780:CDS 40.0%
!! CACTTTCGAAGTGTTGAATC+AGG + chr5_4:56556019-56556038 None:intergenic 40.0%
TCCAATTCGAATTCAAACGG+TGG - chr5_4:56555161-56555180 Msa0858780:CDS 40.0%
ACCACCGTTTGAATTCGAAT+TGG + chr5_4:56555165-56555184 None:intergenic 40.0%
AATTCGAATTCAAACGGTGG+TGG - chr5_4:56555164-56555183 Msa0858780:CDS 40.0%
GTGATAAAGTGAAGGGTTCA+TGG - chr5_4:56555198-56555217 Msa0858780:CDS 40.0%
AACATTGGTGAAACTGGTGA+AGG - chr5_4:56555238-56555257 Msa0858780:CDS 40.0%
GTGAAACTGGTGAAGGAAAA+CGG - chr5_4:56555245-56555264 Msa0858780:CDS 40.0%
! AACTGGTCTGTGATAAGCAA+CGG - chr5_4:56555275-56555294 Msa0858780:CDS 40.0%
! TCAACACCTTCCTTTTACAC+CGG - chr5_4:56555361-56555380 Msa0858780:CDS 40.0%
ATTGAAGCACATGCAGTTCA+TGG - chr5_4:56555401-56555420 Msa0858780:CDS 40.0%
ATTGCGTTATCTGTTCTACC+TGG + chr5_4:56555458-56555477 None:intergenic 40.0%
CGTGTGAATGAAAGTTACGA+CGG - chr5_4:56555629-56555648 Msa0858780:CDS 40.0%
!! AGGGAATAAAGGTGTTAACG+TGG - chr5_4:56555778-56555797 Msa0858780:CDS 40.0%
! TCGTTAAGTTTGTTTCCACC+TGG - chr5_4:56555809-56555828 Msa0858780:intron 40.0%
TCTTCTTTCAGAAAACCAGG+TGG + chr5_4:56555827-56555846 None:intergenic 40.0%
!! TATGTTGATAACATGCGCCT+TGG - chr5_4:56555980-56555999 Msa0858780:CDS 40.0%
!! CACTTTCGAAGTGTTGAATC+AGG + chr5_4:56556019-56556038 None:intergenic 40.0%
! AACGGTGGTGGTGATGAAAA+CGG - chr5_4:56555176-56555195 Msa0858780:CDS 45.0%
AGGAAAACGGTGCAAGAAAC+TGG - chr5_4:56555258-56555277 Msa0858780:CDS 45.0%
!! AAAGGAAGGTGTTGAACGGT+TGG + chr5_4:56555356-56555375 None:intergenic 45.0%
! ATGATGATGTTATCCTCCGC+CGG + chr5_4:56555383-56555402 None:intergenic 45.0%
ACGATTTCTCGTCTTCTTCC+AGG - chr5_4:56555437-56555456 Msa0858780:CDS 45.0%
CTTTGAACAACCGTTGCAAC+CGG + chr5_4:56555560-56555579 None:intergenic 45.0%
GGTTGCAACGGTTGTTCAAA+GGG - chr5_4:56555559-56555578 Msa0858780:CDS 45.0%
GGTTGTTCAAAGGGTTCCAA+CGG - chr5_4:56555568-56555587 Msa0858780:CDS 45.0%
! ACGTTTTCCGGTTATCACAC+CGG + chr5_4:56555612-56555631 None:intergenic 45.0%
!! AGAATAATAGCGGGTCACGT+GGG - chr5_4:56555714-56555733 Msa0858780:CDS 45.0%
TGACGGTGAAGAAACGGTAA+CGG - chr5_4:56555742-56555761 Msa0858780:CDS 45.0%
! TAACGGAAGATGATGACGCA+GGG - chr5_4:56555759-56555778 Msa0858780:CDS 45.0%
! GATGATGACGCAGGGAATAA+AGG - chr5_4:56555767-56555786 Msa0858780:CDS 45.0%
GCATGATAGCAGAGGAAGTT+AGG - chr5_4:56555954-56555973 Msa0858780:intron 45.0%
! AACGGTGGTGGTGATGAAAA+CGG - chr5_4:56555176-56555195 Msa0858780:CDS 45.0%
AGGAAAACGGTGCAAGAAAC+TGG - chr5_4:56555258-56555277 Msa0858780:CDS 45.0%
!! AAAGGAAGGTGTTGAACGGT+TGG + chr5_4:56555356-56555375 None:intergenic 45.0%
! ATGATGATGTTATCCTCCGC+CGG + chr5_4:56555383-56555402 None:intergenic 45.0%
ACGATTTCTCGTCTTCTTCC+AGG - chr5_4:56555437-56555456 Msa0858780:CDS 45.0%
CTTTGAACAACCGTTGCAAC+CGG + chr5_4:56555560-56555579 None:intergenic 45.0%
GGTTGCAACGGTTGTTCAAA+GGG - chr5_4:56555559-56555578 Msa0858780:CDS 45.0%
GGTTGTTCAAAGGGTTCCAA+CGG - chr5_4:56555568-56555587 Msa0858780:CDS 45.0%
! ACGTTTTCCGGTTATCACAC+CGG + chr5_4:56555612-56555631 None:intergenic 45.0%
!! AGAATAATAGCGGGTCACGT+GGG - chr5_4:56555714-56555733 Msa0858780:CDS 45.0%
TGACGGTGAAGAAACGGTAA+CGG - chr5_4:56555742-56555761 Msa0858780:CDS 45.0%
! TAACGGAAGATGATGACGCA+GGG - chr5_4:56555759-56555778 Msa0858780:CDS 45.0%
! GATGATGACGCAGGGAATAA+AGG - chr5_4:56555767-56555786 Msa0858780:CDS 45.0%
GCATGATAGCAGAGGAAGTT+AGG - chr5_4:56555954-56555973 Msa0858780:intron 45.0%
GTGATAAGCAACGGAATCCC+CGG - chr5_4:56555284-56555303 Msa0858780:CDS 50.0%
! ACACCTTCCTTTTACACCGG+CGG - chr5_4:56555364-56555383 Msa0858780:CDS 50.0%
TTATCCTCCGCCGGTGTAAA+AGG + chr5_4:56555374-56555393 None:intergenic 50.0%
! AGCGGTTTCACCGGTTACAA+CGG - chr5_4:56555529-56555548 Msa0858780:CDS 50.0%
CGGTTGCAACGGTTGTTCAA+AGG - chr5_4:56555558-56555577 Msa0858780:CDS 50.0%
TGTTCAAAGGGTTCCAACGG+CGG - chr5_4:56555571-56555590 Msa0858780:CDS 50.0%
ATTCCCACCGGTGTGATAAC+CGG - chr5_4:56555602-56555621 Msa0858780:CDS 50.0%
TTTCCGGTTATCACACCGGT+GGG + chr5_4:56555608-56555627 None:intergenic 50.0%
! TTTTCCGGTTATCACACCGG+TGG + chr5_4:56555609-56555628 None:intergenic 50.0%
!! GAGAATAATAGCGGGTCACG+TGG - chr5_4:56555713-56555732 Msa0858780:CDS 50.0%
GTCACGTGACGGTGAAGAAA+CGG - chr5_4:56555736-56555755 Msa0858780:CDS 50.0%
! GTAACGGAAGATGATGACGC+AGG - chr5_4:56555758-56555777 Msa0858780:CDS 50.0%
TCTTCAGCGCATGATAGCAG+AGG - chr5_4:56555946-56555965 Msa0858780:intron 50.0%
!! GTTGATAACATGCGCCTTGG+TGG - chr5_4:56555983-56556002 Msa0858780:CDS 50.0%
! ATAACATGCGCCTTGGTGGT+GGG - chr5_4:56555987-56556006 Msa0858780:CDS 50.0%
GTGATAAGCAACGGAATCCC+CGG - chr5_4:56555284-56555303 Msa0858780:CDS 50.0%
! ACACCTTCCTTTTACACCGG+CGG - chr5_4:56555364-56555383 Msa0858780:CDS 50.0%
TTATCCTCCGCCGGTGTAAA+AGG + chr5_4:56555374-56555393 None:intergenic 50.0%
! AGCGGTTTCACCGGTTACAA+CGG - chr5_4:56555529-56555548 Msa0858780:CDS 50.0%
CGGTTGCAACGGTTGTTCAA+AGG - chr5_4:56555558-56555577 Msa0858780:CDS 50.0%
TGTTCAAAGGGTTCCAACGG+CGG - chr5_4:56555571-56555590 Msa0858780:CDS 50.0%
ATTCCCACCGGTGTGATAAC+CGG - chr5_4:56555602-56555621 Msa0858780:CDS 50.0%
TTTCCGGTTATCACACCGGT+GGG + chr5_4:56555608-56555627 None:intergenic 50.0%
! TTTTCCGGTTATCACACCGG+TGG + chr5_4:56555609-56555628 None:intergenic 50.0%
!! GAGAATAATAGCGGGTCACG+TGG - chr5_4:56555713-56555732 Msa0858780:CDS 50.0%
GTCACGTGACGGTGAAGAAA+CGG - chr5_4:56555736-56555755 Msa0858780:CDS 50.0%
! GTAACGGAAGATGATGACGC+AGG - chr5_4:56555758-56555777 Msa0858780:CDS 50.0%
TCTTCAGCGCATGATAGCAG+AGG - chr5_4:56555946-56555965 Msa0858780:intron 50.0%
!! GTTGATAACATGCGCCTTGG+TGG - chr5_4:56555983-56556002 Msa0858780:CDS 50.0%
! ATAACATGCGCCTTGGTGGT+GGG - chr5_4:56555987-56556006 Msa0858780:CDS 50.0%
AAGACTTCCCAGAACGACCG+GGG + chr5_4:56555304-56555323 None:intergenic 55.0%
CAAGACTTCCCAGAACGACC+GGG + chr5_4:56555305-56555324 None:intergenic 55.0%
GCAAGACTTCCCAGAACGAC+CGG + chr5_4:56555306-56555325 None:intergenic 55.0%
GCTGATTACACCACCGCAGA+CGG + chr5_4:56555328-56555347 None:intergenic 55.0%
ACCGGTTACAACGGTTCCAC+CGG - chr5_4:56555538-56555557 Msa0858780:CDS 55.0%
ACCGGTGGAACCGTTGTAAC+CGG + chr5_4:56555542-56555561 None:intergenic 55.0%
! AACGGTTCCACCGGTTGCAA+CGG - chr5_4:56555547-56555566 Msa0858780:CDS 55.0%
TGAACAACCGTTGCAACCGG+TGG + chr5_4:56555557-56555576 None:intergenic 55.0%
ATCACACCGGTGGGAATCAC+CGG + chr5_4:56555599-56555618 None:intergenic 55.0%
GATAACATGCGCCTTGGTGG+TGG - chr5_4:56555986-56556005 Msa0858780:CDS 55.0%
AAGACTTCCCAGAACGACCG+GGG + chr5_4:56555304-56555323 None:intergenic 55.0%
CAAGACTTCCCAGAACGACC+GGG + chr5_4:56555305-56555324 None:intergenic 55.0%
GCAAGACTTCCCAGAACGAC+CGG + chr5_4:56555306-56555325 None:intergenic 55.0%
GCTGATTACACCACCGCAGA+CGG + chr5_4:56555328-56555347 None:intergenic 55.0%
ACCGGTTACAACGGTTCCAC+CGG - chr5_4:56555538-56555557 Msa0858780:CDS 55.0%
ACCGGTGGAACCGTTGTAAC+CGG + chr5_4:56555542-56555561 None:intergenic 55.0%
! AACGGTTCCACCGGTTGCAA+CGG - chr5_4:56555547-56555566 Msa0858780:CDS 55.0%
TGAACAACCGTTGCAACCGG+TGG + chr5_4:56555557-56555576 None:intergenic 55.0%
ATCACACCGGTGGGAATCAC+CGG + chr5_4:56555599-56555618 None:intergenic 55.0%
GATAACATGCGCCTTGGTGG+TGG - chr5_4:56555986-56556005 Msa0858780:CDS 55.0%
AACGGAATCCCCGGTCGTTC+TGG - chr5_4:56555293-56555312 Msa0858780:CDS 60.0%
ACGGAATCCCCGGTCGTTCT+GGG - chr5_4:56555294-56555313 Msa0858780:CDS 60.0%
CTGGGAAGTCTTGCCGTCTG+CGG - chr5_4:56555312-56555331 Msa0858780:CDS 60.0%
CCTCCGCCGGTGTAAAAGGA+AGG + chr5_4:56555370-56555389 None:intergenic 60.0%
! CCTTCCTTTTACACCGGCGG+AGG - chr5_4:56555367-56555386 Msa0858780:CDS 60.0%
! GGCTCTAGCAGCGGTTTCAC+CGG - chr5_4:56555520-56555539 Msa0858780:CDS 60.0%
CAGGAGCAAACCCACCACCA+AGG + chr5_4:56556000-56556019 None:intergenic 60.0%
AACGGAATCCCCGGTCGTTC+TGG - chr5_4:56555293-56555312 Msa0858780:CDS 60.0%
ACGGAATCCCCGGTCGTTCT+GGG - chr5_4:56555294-56555313 Msa0858780:CDS 60.0%
CTGGGAAGTCTTGCCGTCTG+CGG - chr5_4:56555312-56555331 Msa0858780:CDS 60.0%
CCTCCGCCGGTGTAAAAGGA+AGG + chr5_4:56555370-56555389 None:intergenic 60.0%
! CCTTCCTTTTACACCGGCGG+AGG - chr5_4:56555367-56555386 Msa0858780:CDS 60.0%
! GGCTCTAGCAGCGGTTTCAC+CGG - chr5_4:56555520-56555539 Msa0858780:CDS 60.0%
CAGGAGCAAACCCACCACCA+AGG + chr5_4:56556000-56556019 None:intergenic 60.0%
GGAAGTCTTGCCGTCTGCGG+TGG - chr5_4:56555315-56555334 Msa0858780:CDS 65.0%
AACTCTCCGCCGACGTCGCA+CGG - chr5_4:56555496-56555515 Msa0858780:CDS 65.0%
AAGGGTTCCAACGGCGGTGC+CGG - chr5_4:56555577-56555596 Msa0858780:CDS 65.0%
GGGTCACGTGGGTCACGTGA+CGG - chr5_4:56555725-56555744 Msa0858780:CDS 65.0%
GGAAGTCTTGCCGTCTGCGG+TGG - chr5_4:56555315-56555334 Msa0858780:CDS 65.0%
AACTCTCCGCCGACGTCGCA+CGG - chr5_4:56555496-56555515 Msa0858780:CDS 65.0%
AAGGGTTCCAACGGCGGTGC+CGG - chr5_4:56555577-56555596 Msa0858780:CDS 65.0%
GGGTCACGTGGGTCACGTGA+CGG - chr5_4:56555725-56555744 Msa0858780:CDS 65.0%
CTAGAGCCGCCGTGCGACGT+CGG + chr5_4:56555508-56555527 None:intergenic 70.0%
! TCGCACGGCGGCTCTAGCAG+CGG - chr5_4:56555511-56555530 Msa0858780:CDS 70.0%
GGAATCACCGGCACCGCCGT+TGG + chr5_4:56555587-56555606 None:intergenic 70.0%
!! GCGGTGCCGGTGATTCCCAC+CGG - chr5_4:56555590-56555609 Msa0858780:CDS 70.0%
CTAGAGCCGCCGTGCGACGT+CGG + chr5_4:56555508-56555527 None:intergenic 70.0%
! TCGCACGGCGGCTCTAGCAG+CGG - chr5_4:56555511-56555530 Msa0858780:CDS 70.0%
GGAATCACCGGCACCGCCGT+TGG + chr5_4:56555587-56555606 None:intergenic 70.0%
!! GCGGTGCCGGTGATTCCCAC+CGG - chr5_4:56555590-56555609 Msa0858780:CDS 70.0%
TCTCCGCCGACGTCGCACGG+CGG - chr5_4:56555499-56555518 Msa0858780:CDS 75.0%
TCTCCGCCGACGTCGCACGG+CGG - chr5_4:56555499-56555518 Msa0858780:CDS 75.0%
! GAGCCGCCGTGCGACGTCGG+CGG + chr5_4:56555505-56555524 None:intergenic 80.0%
! GAGCCGCCGTGCGACGTCGG+CGG + chr5_4:56555505-56555524 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 56554899 56556039 56554899 ID=Msa0858780;Name=Msa0858780
chr5_4 mRNA 56554899 56556039 56554899 ID=Msa0858780-mRNA-1;Parent=Msa0858780;Name=Msa0858780-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0|1|0|0|2|0|325
chr5_4 exon 56555974 56556039 56555974 ID=Msa0858780-mRNA-1:exon:17297;Parent=Msa0858780-mRNA-1
chr5_4 exon 56554899 56555810 56554899 ID=Msa0858780-mRNA-1:exon:17296;Parent=Msa0858780-mRNA-1
chr5_4 CDS 56555974 56556039 56555974 ID=Msa0858780-mRNA-1:cds;Parent=Msa0858780-mRNA-1
chr5_4 CDS 56554899 56555810 56554899 ID=Msa0858780-mRNA-1:cds;Parent=Msa0858780-mRNA-1
Gene Sequence

>Msa0858780

TTGAAGAACAGAAACAAACACGTTGGAAGTAGTTACATACACACACACAACAAAAACAGTTTTAAGGTAGAAGAAAAGATGATCAGTGCAAATTCGAATTCCAATTCGAATTCAAACGGTGGTGGTGATGAAAACGGTGATAAAGTGAAGGGTTCATGGAGTAAAAACGAAGATGAAACATTGGTGAAACTGGTGAAGGAAAACGGTGCAAGAAACTGGTCTGTGATAAGCAACGGAATCCCCGGTCGTTCTGGGAAGTCTTGCCGTCTGCGGTGGTGTAATCAGCTGAGTCCAACCGTTCAACACCTTCCTTTTACACCGGCGGAGGATAACATCATCATTGAAGCACATGCAGTTCATGGAAACAAATGGGCGACGATTTCTCGTCTTCTTCCAGGTAGAACAGATAACGCAATAAAAAATCACTGGAATTCAACTCTCCGCCGACGTCGCACGGCGGCTCTAGCAGCGGTTTCACCGGTTACAACGGTTCCACCGGTTGCAACGGTTGTTCAAAGGGTTCCAACGGCGGTGCCGGTGATTCCCACCGGTGTGATAACCGGAAAACGTGTGAATGAAAGTTACGACGGTGATTATTATAAGGATTTGTTGAGTCTCGGCACACGTTATAAACGTCCTTGTGTTATGGTTGAGAATAATAGCGGGTCACGTGGGTCACGTGACGGTGAAGAAACGGTAACGGAAGATGATGACGCAGGGAATAAAGGTGTTAACGTGGTTAGGACGTCGTTAAGTTTGTTTCCACCTGGTTTTCTGAAAGAAGAAGAAGAGAGAAAAGAAAAAGAAAAAGAAAAAGAAATTGAAGATTTTGAAGATAGTAATGATGATTTGAAGTTACTGAAAAATGAGAAATTGAGGTCGGTTCTTCAGCGCATGATAGCAGAGGAAGTTAGGAATTATGTTGATAACATGCGCCTTGGTGGTGGGTTTGCTCCTGATTCAACACTTCGAAAGTGA
Protein sequence

>Msa0858780

LKNRNKHVGSSYIHTHNKNSFKVEEKMISANSNSNSNSNGGGDENGDKVKGSWSKNEDETLVKLVKENGARNWSVISNGIPGRSGKSCRLRWCNQLSPTVQHLPFTPAEDNIIIEAHAVHGNKWATISRLLPGRTDNAIKNHWNSTLRRRRTAALAAVSPVTTVPPVATVVQRVPTAVPVIPTGVITGKRVNESYDGDYYKDLLSLGTRYKRPCVMVENNSGSRGSRDGEETVTEDDDAGNKGVNVVRTSLSLFPPGFLKEEEERKEKEKEKEIEDFEDSNDDLKLLKNEKLRSVLQRMIAEEVRNYVDNMRLGGGFAPDSTLRK*