Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859720 | XP_013454279.1 | 80.952 | 252 | 12 | 1 | 8 | 259 | 38 | 253 | 1.94e-121 | 378 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859720 | sp|Q9C895|BRE1B_ARATH | 42.000 | 250 | 107 | 2 | 9 | 258 | 61 | 272 | 1.21e-50 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859720 | A0A072UR29 | 80.952 | 252 | 12 | 1 | 8 | 259 | 38 | 253 | 9.26e-122 | 378 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0484780 | Msa0859720 | 0.811184 | 7.946739e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859720 | MtrunA17_Chr5g0438781 | 80.952 | 252 | 12 | 1 | 8 | 259 | 38 | 253 | 1.78e-125 | 378 |
| Msa0859720 | MtrunA17_Chr1g0182391 | 75.294 | 255 | 27 | 1 | 5 | 259 | 35 | 253 | 3.26e-114 | 349 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0859720 | AT1G55250.3 | 42.800 | 250 | 107 | 1 | 9 | 258 | 40 | 253 | 4.06e-55 | 191 |
| Msa0859720 | AT1G55250.5 | 42.800 | 250 | 107 | 1 | 9 | 258 | 40 | 253 | 5.03e-55 | 191 |
| Msa0859720 | AT1G55250.1 | 42.000 | 250 | 107 | 2 | 9 | 258 | 61 | 272 | 1.23e-51 | 182 |
Find 70 sgRNAs with CRISPR-Local
Find 530 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCCTCCACAGAATCTTTC+TGG | 0.139617 | 5_4:+58173137 | None:intergenic |
| ATTCTTGGTCTACGAGAATT+TGG | 0.163155 | 5_4:-58170785 | Msa0859720:CDS |
| GATCTTGTATAGCCTGTTTC+TGG | 0.173211 | 5_4:+58174586 | None:intergenic |
| GCTGAACAAGCTGCTGATTC+TGG | 0.251145 | 5_4:+58174619 | None:intergenic |
| TTGGACACTCTCTTTACTAT+TGG | 0.254115 | 5_4:-58174310 | Msa0859720:CDS |
| CCTATTACTTGGTGTGTAAA+AGG | 0.260524 | 5_4:+58174275 | None:intergenic |
| TTTGTAGCTGGTTGATGATA+TGG | 0.269147 | 5_4:-58173375 | Msa0859720:intron |
| CTTTGCGTCGGTTATCTACT+AGG | 0.292056 | 5_4:-58173072 | Msa0859720:CDS |
| GATTGATGATATGACGAAAA+AGG | 0.308345 | 5_4:-58172800 | Msa0859720:CDS |
| AAAAGATTCTTTGAAAACTT+TGG | 0.324595 | 5_4:-58173324 | Msa0859720:CDS |
| AGCACTCGTCTATATAATTC+TGG | 0.335894 | 5_4:+58172710 | None:intergenic |
| TCTGACATAAAACAACTTAC+AGG | 0.344586 | 5_4:-58172676 | Msa0859720:intron |
| AAATGCTCGTTCAGCCTATT+AGG | 0.350209 | 5_4:-58170704 | None:intergenic |
| GAAGAGAAAGAAGGCCTAAT+AGG | 0.378697 | 5_4:+58170690 | None:intergenic |
| TAATAGGCTGAACGAGCATT+TGG | 0.385324 | 5_4:+58170706 | None:intergenic |
| TGATCCCAAGGTAAGGATAT+CGG | 0.385420 | 5_4:+58170750 | None:intergenic |
| TTCCTTTCCTTCGTGTCCTC+CGG | 0.404242 | 5_4:-58173185 | Msa0859720:CDS |
| GTTGATGATATGGCTCTTCT+CGG | 0.410027 | 5_4:-58173365 | Msa0859720:CDS |
| TTCTTGGTCTACGAGAATTT+GGG | 0.419692 | 5_4:-58170784 | Msa0859720:CDS |
| GAAACGGGAAAAGATATGTA+TGG | 0.420462 | 5_4:-58174806 | None:intergenic |
| TGCTTCCTCCAGGCTGATGC+AGG | 0.421842 | 5_4:-58174654 | Msa0859720:intron |
| GATCCCAAGGTAAGGATATC+GGG | 0.431922 | 5_4:+58170751 | None:intergenic |
| GCAGACAGAAGTCCAGAAAC+AGG | 0.440620 | 5_4:-58174598 | Msa0859720:CDS |
| AGATACTGCTGATGATCATA+TGG | 0.449716 | 5_4:-58173029 | Msa0859720:CDS |
| GCTCTTCTCGGGATACAAGC+TGG | 0.449889 | 5_4:-58173353 | Msa0859720:CDS |
| ATGGAAAGAATTGAGGATAT+AGG | 0.501506 | 5_4:-58173010 | Msa0859720:CDS |
| AAGTACCTTCAGGATTATCA+AGG | 0.503978 | 5_4:+58173297 | None:intergenic |
| CTCTTCTCGGGATACAAGCT+GGG | 0.505460 | 5_4:-58173352 | Msa0859720:CDS |
| CTACCCCGATATCCTTACCT+TGG | 0.510931 | 5_4:-58170755 | Msa0859720:CDS |
| TACCCCGATATCCTTACCTT+GGG | 0.511618 | 5_4:-58170754 | Msa0859720:CDS |
| AATCACTTCACGAAAATTGT+CGG | 0.513242 | 5_4:+58172774 | None:intergenic |
| ATTGCTTGGACACTCTCCAT+TGG | 0.515809 | 5_4:-58174329 | Msa0859720:CDS |
| CAATGCTAAGGACAATTGCT+TGG | 0.519369 | 5_4:-58174343 | Msa0859720:CDS |
| AAGAATTGAGGATATAGGTC+AGG | 0.532464 | 5_4:-58173005 | Msa0859720:CDS |
| TTTGCGTCGGTTATCTACTA+GGG | 0.536181 | 5_4:-58173071 | Msa0859720:CDS |
| CATATGTATTATACCTTCCG+TGG | 0.537093 | 5_4:+58172964 | None:intergenic |
| AATCAACCAACACTGGGATC+AGG | 0.540393 | 5_4:-58174502 | Msa0859720:intron |
| TAATTGCAATCAACCAACAC+TGG | 0.541368 | 5_4:-58174509 | Msa0859720:CDS |
| CTACATAGAAGTATATCATC+CGG | 0.541890 | 5_4:+58173166 | None:intergenic |
| AGGAAGCTCTTGCTTTGCGT+CGG | 0.546562 | 5_4:-58173084 | Msa0859720:CDS |
| ATCCAGAAAGATTCTGTGGA+GGG | 0.551161 | 5_4:-58173139 | Msa0859720:CDS |
| CTCGGGATACAAGCTGGGAG+AGG | 0.556620 | 5_4:-58173347 | Msa0859720:CDS |
| TTGATGATATGGCTCTTCTC+GGG | 0.557494 | 5_4:-58173364 | Msa0859720:CDS |
| AAACGGGAAAAGATATGTAT+GGG | 0.560030 | 5_4:-58174805 | None:intergenic |
| GATTACCTTGATAATCCTGA+AGG | 0.565357 | 5_4:-58173302 | Msa0859720:intron |
| CACGAAGATTTATCCACGGA+AGG | 0.568556 | 5_4:-58172977 | Msa0859720:intron |
| TGATCATATGGAAAGAATTG+AGG | 0.573087 | 5_4:-58173017 | Msa0859720:CDS |
| GGAAAAGATATGTATGGGCA+AGG | 0.580313 | 5_4:-58174800 | None:intergenic |
| TTTGTCATAGAGCAATGCTA+AGG | 0.591786 | 5_4:-58174355 | Msa0859720:CDS |
| GAGGCAGTGATCCCAAGGTA+AGG | 0.596258 | 5_4:+58170743 | None:intergenic |
| AAAACGAGGCAGTGATCCCA+AGG | 0.600774 | 5_4:+58170738 | None:intergenic |
| ATTAATCCAGAAAGATTCTG+TGG | 0.603677 | 5_4:-58173143 | Msa0859720:CDS |
| CAATAACCTGATCCCAGTGT+TGG | 0.604541 | 5_4:+58174496 | None:intergenic |
| ATCCGGAGGACACGAAGGAA+AGG | 0.604620 | 5_4:+58173183 | None:intergenic |
| AAACACAAGGAGTATACTGT+TGG | 0.609461 | 5_4:-58172736 | Msa0859720:CDS |
| CGAGATTACTAATTACGTTG+AGG | 0.618010 | 5_4:-58173104 | Msa0859720:CDS |
| CAAGGTAAGGATATCGGGGT+AGG | 0.619113 | 5_4:+58170756 | None:intergenic |
| AATTGCAATCAACCAACACT+GGG | 0.631357 | 5_4:-58174508 | Msa0859720:CDS |
| GAAAAGATATGTATGGGCAA+GGG | 0.635692 | 5_4:-58174799 | None:intergenic |
| CAGAAAGATTCTGTGGAGGG+AGG | 0.638260 | 5_4:-58173136 | Msa0859720:CDS |
| AATCCAGAAAGATTCTGTGG+AGG | 0.648780 | 5_4:-58173140 | Msa0859720:CDS |
| ATAGTAAAGAGAGTGTCCAA+TGG | 0.660863 | 5_4:+58174313 | None:intergenic |
| TACTCTCCATGCAAAACACA+AGG | 0.662712 | 5_4:-58172749 | Msa0859720:CDS |
| CTTACACGAAGATTTATCCA+CGG | 0.672505 | 5_4:-58172981 | Msa0859720:CDS |
| ATCCCAAGGTAAGGATATCG+GGG | 0.677601 | 5_4:+58170752 | None:intergenic |
| GTGTGTAAAAGGTGGTGACG+TGG | 0.686914 | 5_4:+58174286 | None:intergenic |
| ATATCATCCGGAGGACACGA+AGG | 0.688436 | 5_4:+58173178 | None:intergenic |
| CATAGAAGTATATCATCCGG+AGG | 0.695405 | 5_4:+58173169 | None:intergenic |
| TTTGGAAAGAAGAGAAAACG+AGG | 0.702557 | 5_4:+58170724 | None:intergenic |
| ATTACTTGGTGTGTAAAAGG+TGG | 0.737811 | 5_4:+58174278 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAATAGTATAAAC+TGG | + | chr5_4:58171259-58171278 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTTTTTAAGTTG+CGG | - | chr5_4:58171917-58171936 | Msa0859720:intron | 10.0% |
| !!! | ATTTATATAATAATCTTTTG+AGG | - | chr5_4:58173197-58173216 | Msa0859720:intron | 10.0% |
| !!! | TTTATATAATAATCTTTTGA+GGG | - | chr5_4:58173198-58173217 | Msa0859720:intron | 10.0% |
| !!! | ATCAAGTAAAATTTAATTTT+AGG | - | chr5_4:58173539-58173558 | Msa0859720:intron | 10.0% |
| !!! | TCAAGTAAAATTTAATTTTA+GGG | - | chr5_4:58173540-58173559 | Msa0859720:intron | 10.0% |
| !! | AAAAAAAAAATAGTATAAAC+TGG | + | chr5_4:58171259-58171278 | None:intergenic | 10.0% |
| !!! | TATTTTTTTTTTTTAAGTTG+CGG | - | chr5_4:58171917-58171936 | Msa0859720:intron | 10.0% |
| !!! | ATTTATATAATAATCTTTTG+AGG | - | chr5_4:58173197-58173216 | Msa0859720:intron | 10.0% |
| !!! | TTTATATAATAATCTTTTGA+GGG | - | chr5_4:58173198-58173217 | Msa0859720:intron | 10.0% |
| !!! | ATCAAGTAAAATTTAATTTT+AGG | - | chr5_4:58173539-58173558 | Msa0859720:intron | 10.0% |
| !!! | TCAAGTAAAATTTAATTTTA+GGG | - | chr5_4:58173540-58173559 | Msa0859720:intron | 10.0% |
| !! | AAATAGAAGAAAACAAAATA+TGG | + | chr5_4:58171479-58171498 | None:intergenic | 15.0% |
| !! | ATGAAAAATAGATTAATAGA+TGG | - | chr5_4:58171775-58171794 | Msa0859720:intron | 15.0% |
| !!! | ATTTTTTTTTTTTAAGTTGC+GGG | - | chr5_4:58171918-58171937 | Msa0859720:intron | 15.0% |
| !! | AAAACAATAATAACTTTAAC+TGG | - | chr5_4:58171944-58171963 | Msa0859720:intron | 15.0% |
| !! | AATACAATATCTATGATATA+TGG | + | chr5_4:58172598-58172617 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTACTTATACT+TGG | - | chr5_4:58172643-58172662 | Msa0859720:intron | 15.0% |
| !!! | TTTTGTTTTTACTTATACTT+GGG | - | chr5_4:58172644-58172663 | Msa0859720:intron | 15.0% |
| !!! | ATATTGATTATCATATAATG+TGG | - | chr5_4:58172928-58172947 | Msa0859720:intron | 15.0% |
| !!! | TATTGATTATCATATAATGT+GGG | - | chr5_4:58172929-58172948 | Msa0859720:intron | 15.0% |
| !! | ATAAGTGACAATATTATATA+TGG | - | chr5_4:58173022-58173041 | Msa0859720:CDS | 15.0% |
| !! | GATTATTATATAAATTTGGT+CGG | + | chr5_4:58173192-58173211 | None:intergenic | 15.0% |
| !!! | TTGATGATGTTAAAATAATA+TGG | - | chr5_4:58173349-58173368 | Msa0859720:CDS | 15.0% |
| !!! | TAGCTTTATCTAAAAAAATT+GGG | + | chr5_4:58173894-58173913 | None:intergenic | 15.0% |
| !!! | ATAGCTTTATCTAAAAAAAT+TGG | + | chr5_4:58173895-58173914 | None:intergenic | 15.0% |
| !!! | TTCATTTTAAATACAGTTTT+AGG | + | chr5_4:58174221-58174240 | None:intergenic | 15.0% |
| !! | TAAAATGAATATGTAAAAGA+AGG | - | chr5_4:58174232-58174251 | Msa0859720:intron | 15.0% |
| !! | AAATAGAAGAAAACAAAATA+TGG | + | chr5_4:58171479-58171498 | None:intergenic | 15.0% |
| !! | ATGAAAAATAGATTAATAGA+TGG | - | chr5_4:58171775-58171794 | Msa0859720:intron | 15.0% |
| !!! | ATTTTTTTTTTTTAAGTTGC+GGG | - | chr5_4:58171918-58171937 | Msa0859720:intron | 15.0% |
| !! | AAAACAATAATAACTTTAAC+TGG | - | chr5_4:58171944-58171963 | Msa0859720:intron | 15.0% |
| !! | AATACAATATCTATGATATA+TGG | + | chr5_4:58172598-58172617 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTACTTATACT+TGG | - | chr5_4:58172643-58172662 | Msa0859720:intron | 15.0% |
| !!! | TTTTGTTTTTACTTATACTT+GGG | - | chr5_4:58172644-58172663 | Msa0859720:intron | 15.0% |
| !!! | ATATTGATTATCATATAATG+TGG | - | chr5_4:58172928-58172947 | Msa0859720:intron | 15.0% |
| !!! | TATTGATTATCATATAATGT+GGG | - | chr5_4:58172929-58172948 | Msa0859720:intron | 15.0% |
| !! | ATAAGTGACAATATTATATA+TGG | - | chr5_4:58173022-58173041 | Msa0859720:CDS | 15.0% |
| !! | GATTATTATATAAATTTGGT+CGG | + | chr5_4:58173192-58173211 | None:intergenic | 15.0% |
| !!! | TTGATGATGTTAAAATAATA+TGG | - | chr5_4:58173349-58173368 | Msa0859720:CDS | 15.0% |
| !!! | TAGCTTTATCTAAAAAAATT+GGG | + | chr5_4:58173894-58173913 | None:intergenic | 15.0% |
| !!! | ATAGCTTTATCTAAAAAAAT+TGG | + | chr5_4:58173895-58173914 | None:intergenic | 15.0% |
| !!! | TTCATTTTAAATACAGTTTT+AGG | + | chr5_4:58174221-58174240 | None:intergenic | 15.0% |
| !! | TAAAATGAATATGTAAAAGA+AGG | - | chr5_4:58174232-58174251 | Msa0859720:intron | 15.0% |
| !! | TTCCTTAAAATAATACTTGA+AGG | - | chr5_4:58171377-58171396 | Msa0859720:intron | 20.0% |
| !! | AAAATCAAATTTCACACAAA+AGG | - | chr5_4:58171567-58171586 | Msa0859720:intron | 20.0% |
| !! | AATTAATCTTTAGCATATGA+TGG | - | chr5_4:58171732-58171751 | Msa0859720:intron | 20.0% |
| !!! | AAAAGATTCTTTGAAAACTT+TGG | - | chr5_4:58172172-58172191 | Msa0859720:intron | 20.0% |
| !! | TAATACTACATAAAAGAACT+TGG | + | chr5_4:58172254-58172273 | None:intergenic | 20.0% |
| !!! | AGTTCTTTTATGTAGTATTA+AGG | - | chr5_4:58172254-58172273 | Msa0859720:intron | 20.0% |
| !!! | TTATGAAGTTTAGAATAACT+CGG | - | chr5_4:58172891-58172910 | Msa0859720:intron | 20.0% |
| !! | AACAACTATAATTAAACAAC+AGG | + | chr5_4:58172992-58173011 | None:intergenic | 20.0% |
| !! | TGTTCAAAAAAAATCTCTTA+AGG | + | chr5_4:58173073-58173092 | None:intergenic | 20.0% |
| !!! | ATATTAACAAGGATGATTTT+TGG | - | chr5_4:58173110-58173129 | Msa0859720:CDS | 20.0% |
| !! | GTTTACCATAAAATTATGTT+GGG | - | chr5_4:58173263-58173282 | Msa0859720:intron | 20.0% |
| !! | TTTACCATAAAATTATGTTG+GGG | - | chr5_4:58173264-58173283 | Msa0859720:intron | 20.0% |
| !! | TGATGTTAAAATAATATGGA+AGG | - | chr5_4:58173353-58173372 | Msa0859720:CDS | 20.0% |
| !!! | ATTTTCGTATCTTAAAACAA+AGG | - | chr5_4:58173392-58173411 | Msa0859720:intron | 20.0% |
| !! | TCATGAAATATAAGGAATTA+TGG | + | chr5_4:58173438-58173457 | None:intergenic | 20.0% |
| !! | ATCCAGTTAAAGTATAAATA+AGG | - | chr5_4:58173487-58173506 | Msa0859720:intron | 20.0% |
| !!! | ATCCTTATTTATACTTTAAC+TGG | + | chr5_4:58173492-58173511 | None:intergenic | 20.0% |
| !! | GTTAAAGTATAAATAAGGAT+TGG | - | chr5_4:58173492-58173511 | Msa0859720:intron | 20.0% |
| !! | ATGTTTAGATGAAAAGAAAA+GGG | - | chr5_4:58173586-58173605 | Msa0859720:intron | 20.0% |
| !! | GTTAGAATATATTCAATAGT+TGG | - | chr5_4:58173625-58173644 | Msa0859720:intron | 20.0% |
| !!! | AATTAGAGATTTTGGTTAAT+TGG | - | chr5_4:58173651-58173670 | Msa0859720:intron | 20.0% |
| !! | TATTATTGATAGGAATGATT+TGG | + | chr5_4:58174071-58174090 | None:intergenic | 20.0% |
| !! | AAAAAATCATTGTTAACATG+AGG | - | chr5_4:58174258-58174277 | Msa0859720:intron | 20.0% |
| !! | ATTGGATCGATATAAAATAT+TGG | + | chr5_4:58174290-58174309 | None:intergenic | 20.0% |
| !! | GATGTAAAAATTCTACAATA+GGG | - | chr5_4:58174351-58174370 | Msa0859720:CDS | 20.0% |
| !!! | ATGTAAAACAATTTTATGTC+AGG | - | chr5_4:58174437-58174456 | Msa0859720:intron | 20.0% |
| !!! | TGTAAAACAATTTTATGTCA+GGG | - | chr5_4:58174438-58174457 | Msa0859720:intron | 20.0% |
| !! | TTCCTTAAAATAATACTTGA+AGG | - | chr5_4:58171377-58171396 | Msa0859720:intron | 20.0% |
| !! | AAAATCAAATTTCACACAAA+AGG | - | chr5_4:58171567-58171586 | Msa0859720:intron | 20.0% |
| !! | AATTAATCTTTAGCATATGA+TGG | - | chr5_4:58171732-58171751 | Msa0859720:intron | 20.0% |
| !!! | AAAAGATTCTTTGAAAACTT+TGG | - | chr5_4:58172172-58172191 | Msa0859720:intron | 20.0% |
| !! | TAATACTACATAAAAGAACT+TGG | + | chr5_4:58172254-58172273 | None:intergenic | 20.0% |
| !!! | AGTTCTTTTATGTAGTATTA+AGG | - | chr5_4:58172254-58172273 | Msa0859720:intron | 20.0% |
| !!! | TTATGAAGTTTAGAATAACT+CGG | - | chr5_4:58172891-58172910 | Msa0859720:intron | 20.0% |
| !! | AACAACTATAATTAAACAAC+AGG | + | chr5_4:58172992-58173011 | None:intergenic | 20.0% |
| !! | TGTTCAAAAAAAATCTCTTA+AGG | + | chr5_4:58173073-58173092 | None:intergenic | 20.0% |
| !!! | ATATTAACAAGGATGATTTT+TGG | - | chr5_4:58173110-58173129 | Msa0859720:CDS | 20.0% |
| !! | GTTTACCATAAAATTATGTT+GGG | - | chr5_4:58173263-58173282 | Msa0859720:intron | 20.0% |
| !! | TTTACCATAAAATTATGTTG+GGG | - | chr5_4:58173264-58173283 | Msa0859720:intron | 20.0% |
| !! | TGATGTTAAAATAATATGGA+AGG | - | chr5_4:58173353-58173372 | Msa0859720:CDS | 20.0% |
| !!! | ATTTTCGTATCTTAAAACAA+AGG | - | chr5_4:58173392-58173411 | Msa0859720:intron | 20.0% |
| !! | TCATGAAATATAAGGAATTA+TGG | + | chr5_4:58173438-58173457 | None:intergenic | 20.0% |
| !! | ATCCAGTTAAAGTATAAATA+AGG | - | chr5_4:58173487-58173506 | Msa0859720:intron | 20.0% |
| !!! | ATCCTTATTTATACTTTAAC+TGG | + | chr5_4:58173492-58173511 | None:intergenic | 20.0% |
| !! | GTTAAAGTATAAATAAGGAT+TGG | - | chr5_4:58173492-58173511 | Msa0859720:intron | 20.0% |
| !! | ATGTTTAGATGAAAAGAAAA+GGG | - | chr5_4:58173586-58173605 | Msa0859720:intron | 20.0% |
| !! | GTTAGAATATATTCAATAGT+TGG | - | chr5_4:58173625-58173644 | Msa0859720:intron | 20.0% |
| !!! | AATTAGAGATTTTGGTTAAT+TGG | - | chr5_4:58173651-58173670 | Msa0859720:intron | 20.0% |
| !! | TATTATTGATAGGAATGATT+TGG | + | chr5_4:58174071-58174090 | None:intergenic | 20.0% |
| !! | AAAAAATCATTGTTAACATG+AGG | - | chr5_4:58174258-58174277 | Msa0859720:intron | 20.0% |
| !! | ATTGGATCGATATAAAATAT+TGG | + | chr5_4:58174290-58174309 | None:intergenic | 20.0% |
| !! | GATGTAAAAATTCTACAATA+GGG | - | chr5_4:58174351-58174370 | Msa0859720:CDS | 20.0% |
| !!! | ATGTAAAACAATTTTATGTC+AGG | - | chr5_4:58174437-58174456 | Msa0859720:intron | 20.0% |
| !!! | TGTAAAACAATTTTATGTCA+GGG | - | chr5_4:58174438-58174457 | Msa0859720:intron | 20.0% |
| !!! | TCAAAAGTTTTAAAACAGAC+TGG | - | chr5_4:58170736-58170755 | Msa0859720:CDS | 25.0% |
| ! | TTTCCTCTTTCAAATGTAAA+TGG | - | chr5_4:58171075-58171094 | Msa0859720:intron | 25.0% |
| ! | AATTCTGATAATACCTTTAG+TGG | - | chr5_4:58171341-58171360 | Msa0859720:intron | 25.0% |
| !!! | GATGATTATTTTACCACTAA+AGG | + | chr5_4:58171357-58171376 | None:intergenic | 25.0% |
| !!! | TGCCTTCAAGTATTATTTTA+AGG | + | chr5_4:58171382-58171401 | None:intergenic | 25.0% |
| !! | TGAAATTGACAGTTTTCTAA+TGG | + | chr5_4:58171548-58171567 | None:intergenic | 25.0% |
| !! | CTTTTAATCAATTGAGATCT+GGG | + | chr5_4:58171699-58171718 | None:intergenic | 25.0% |
| !! | ACTTTTAATCAATTGAGATC+TGG | + | chr5_4:58171700-58171719 | None:intergenic | 25.0% |
| ! | ATGCTAAAGATTAATTGCAA+AGG | + | chr5_4:58171728-58171747 | None:intergenic | 25.0% |
| !!! | GTTATTGTTGTTTTTCTTGT+TGG | - | chr5_4:58171826-58171845 | Msa0859720:intron | 25.0% |
| ! | CATAGATATTGTATTGCTTA+AGG | - | chr5_4:58172603-58172622 | Msa0859720:intron | 25.0% |
| ! | TGAAGTGGTTAAAACAATAA+AGG | + | chr5_4:58172867-58172886 | None:intergenic | 25.0% |
| ! | AAACTTCATAATAACTGAAG+TGG | + | chr5_4:58172882-58172901 | None:intergenic | 25.0% |
| !!! | CATATAATGTGGGTTTTAAA+TGG | - | chr5_4:58172939-58172958 | Msa0859720:intron | 25.0% |
| ! | TGACCTTGTAAATATTAACA+AGG | - | chr5_4:58173099-58173118 | Msa0859720:CDS | 25.0% |
| ! | CATCCTTGTTAATATTTACA+AGG | + | chr5_4:58173105-58173124 | None:intergenic | 25.0% |
| !! | AAATCTTTCGAGTATCAAAA+TGG | - | chr5_4:58173239-58173258 | Msa0859720:intron | 25.0% |
| !! | AATCTTTCGAGTATCAAAAT+GGG | - | chr5_4:58173240-58173259 | Msa0859720:intron | 25.0% |
| ! | GGTTTACCATAAAATTATGT+TGG | - | chr5_4:58173262-58173281 | Msa0859720:intron | 25.0% |
| ! | AATTGTACAAAGAACTTCTT+CGG | - | chr5_4:58173303-58173322 | Msa0859720:CDS | 25.0% |
| ! | GAAACAGATCATGAAATATA+AGG | + | chr5_4:58173446-58173465 | None:intergenic | 25.0% |
| !! | CTTTTCTTTTCATCTAAACA+TGG | + | chr5_4:58173587-58173606 | None:intergenic | 25.0% |
| ! | CATGTTTAGATGAAAAGAAA+AGG | - | chr5_4:58173585-58173604 | Msa0859720:intron | 25.0% |
| ! | ATCTAAAAAAATTGGGATGA+TGG | + | chr5_4:58173887-58173906 | None:intergenic | 25.0% |
| !! | GAATGATTTGGAAATTAAGA+TGG | + | chr5_4:58174059-58174078 | None:intergenic | 25.0% |
| ! | TGTGGAAATGTATTATTGAT+AGG | + | chr5_4:58174081-58174100 | None:intergenic | 25.0% |
| !!! | TTTTAAATACAGTTTTAGGC+TGG | + | chr5_4:58174217-58174236 | None:intergenic | 25.0% |
| ! | TTGATGTTCATTGTTAACAT+TGG | + | chr5_4:58174321-58174340 | None:intergenic | 25.0% |
| ! | ATGTTAACAATGAACATCAA+TGG | - | chr5_4:58174321-58174340 | Msa0859720:CDS | 25.0% |
| ! | TGTTAACAATGAACATCAAT+GGG | - | chr5_4:58174322-58174341 | Msa0859720:CDS | 25.0% |
| ! | GGATGTAAAAATTCTACAAT+AGG | - | chr5_4:58174350-58174369 | Msa0859720:CDS | 25.0% |
| !! | TCGATATTTTGTAGAATTCT+TGG | - | chr5_4:58174696-58174715 | Msa0859720:intron | 25.0% |
| !!! | TCAAAAGTTTTAAAACAGAC+TGG | - | chr5_4:58170736-58170755 | Msa0859720:CDS | 25.0% |
| ! | TTTCCTCTTTCAAATGTAAA+TGG | - | chr5_4:58171075-58171094 | Msa0859720:intron | 25.0% |
| ! | AATTCTGATAATACCTTTAG+TGG | - | chr5_4:58171341-58171360 | Msa0859720:intron | 25.0% |
| !!! | GATGATTATTTTACCACTAA+AGG | + | chr5_4:58171357-58171376 | None:intergenic | 25.0% |
| !!! | TGCCTTCAAGTATTATTTTA+AGG | + | chr5_4:58171382-58171401 | None:intergenic | 25.0% |
| !! | TGAAATTGACAGTTTTCTAA+TGG | + | chr5_4:58171548-58171567 | None:intergenic | 25.0% |
| !! | CTTTTAATCAATTGAGATCT+GGG | + | chr5_4:58171699-58171718 | None:intergenic | 25.0% |
| !! | ACTTTTAATCAATTGAGATC+TGG | + | chr5_4:58171700-58171719 | None:intergenic | 25.0% |
| ! | ATGCTAAAGATTAATTGCAA+AGG | + | chr5_4:58171728-58171747 | None:intergenic | 25.0% |
| !!! | GTTATTGTTGTTTTTCTTGT+TGG | - | chr5_4:58171826-58171845 | Msa0859720:intron | 25.0% |
| ! | CATAGATATTGTATTGCTTA+AGG | - | chr5_4:58172603-58172622 | Msa0859720:intron | 25.0% |
| ! | TGAAGTGGTTAAAACAATAA+AGG | + | chr5_4:58172867-58172886 | None:intergenic | 25.0% |
| ! | AAACTTCATAATAACTGAAG+TGG | + | chr5_4:58172882-58172901 | None:intergenic | 25.0% |
| !!! | CATATAATGTGGGTTTTAAA+TGG | - | chr5_4:58172939-58172958 | Msa0859720:intron | 25.0% |
| ! | TGACCTTGTAAATATTAACA+AGG | - | chr5_4:58173099-58173118 | Msa0859720:CDS | 25.0% |
| ! | CATCCTTGTTAATATTTACA+AGG | + | chr5_4:58173105-58173124 | None:intergenic | 25.0% |
| !! | AAATCTTTCGAGTATCAAAA+TGG | - | chr5_4:58173239-58173258 | Msa0859720:intron | 25.0% |
| !! | AATCTTTCGAGTATCAAAAT+GGG | - | chr5_4:58173240-58173259 | Msa0859720:intron | 25.0% |
| ! | GGTTTACCATAAAATTATGT+TGG | - | chr5_4:58173262-58173281 | Msa0859720:intron | 25.0% |
| ! | AATTGTACAAAGAACTTCTT+CGG | - | chr5_4:58173303-58173322 | Msa0859720:CDS | 25.0% |
| ! | GAAACAGATCATGAAATATA+AGG | + | chr5_4:58173446-58173465 | None:intergenic | 25.0% |
| !! | CTTTTCTTTTCATCTAAACA+TGG | + | chr5_4:58173587-58173606 | None:intergenic | 25.0% |
| ! | CATGTTTAGATGAAAAGAAA+AGG | - | chr5_4:58173585-58173604 | Msa0859720:intron | 25.0% |
| ! | ATCTAAAAAAATTGGGATGA+TGG | + | chr5_4:58173887-58173906 | None:intergenic | 25.0% |
| !! | GAATGATTTGGAAATTAAGA+TGG | + | chr5_4:58174059-58174078 | None:intergenic | 25.0% |
| ! | TGTGGAAATGTATTATTGAT+AGG | + | chr5_4:58174081-58174100 | None:intergenic | 25.0% |
| !!! | TTTTAAATACAGTTTTAGGC+TGG | + | chr5_4:58174217-58174236 | None:intergenic | 25.0% |
| ! | TTGATGTTCATTGTTAACAT+TGG | + | chr5_4:58174321-58174340 | None:intergenic | 25.0% |
| ! | ATGTTAACAATGAACATCAA+TGG | - | chr5_4:58174321-58174340 | Msa0859720:CDS | 25.0% |
| ! | TGTTAACAATGAACATCAAT+GGG | - | chr5_4:58174322-58174341 | Msa0859720:CDS | 25.0% |
| ! | GGATGTAAAAATTCTACAAT+AGG | - | chr5_4:58174350-58174369 | Msa0859720:CDS | 25.0% |
| !! | TCGATATTTTGTAGAATTCT+TGG | - | chr5_4:58174696-58174715 | Msa0859720:intron | 25.0% |
| !! | AGAATTTTGACCTGTTATTG+TGG | + | chr5_4:58171327-58171346 | None:intergenic | 30.0% |
| AGATCTATGGAAGAAAGAAT+GGG | + | chr5_4:58171506-58171525 | None:intergenic | 30.0% | |
| CATAGATCTCAAAAATCCAA+CGG | - | chr5_4:58171517-58171536 | Msa0859720:intron | 30.0% | |
| TGTAACATCTTGCAATTTAG+TGG | + | chr5_4:58171612-58171631 | None:intergenic | 30.0% | |
| ATTGCAAGATGTTACAATCT+AGG | - | chr5_4:58171616-58171635 | Msa0859720:intron | 30.0% | |
| TAGATGGCCTGTTAATTATT+TGG | - | chr5_4:58171791-58171810 | Msa0859720:intron | 30.0% | |
| AGATGGCCTGTTAATTATTT+GGG | - | chr5_4:58171792-58171811 | Msa0859720:intron | 30.0% | |
| CAACATCCCAAATAATTAAC+AGG | + | chr5_4:58171801-58171820 | None:intergenic | 30.0% | |
| !!! | ATTGTTGTTTTTCTTGTTGG+CGG | - | chr5_4:58171829-58171848 | Msa0859720:intron | 30.0% |
| ! | CTTTTTACAAACAATGCAAC+TGG | + | chr5_4:58171982-58172001 | None:intergenic | 30.0% |
| GTTGCATTGTTTGTAAAAAG+TGG | - | chr5_4:58171982-58172001 | Msa0859720:intron | 30.0% | |
| !! | GACTTATTTTCTTTTGTAGC+TGG | - | chr5_4:58172109-58172128 | Msa0859720:intron | 30.0% |
| ! | ACTGACTTTACTTTCTTTCT+AGG | - | chr5_4:58172288-58172307 | Msa0859720:intron | 30.0% |
| ! | CTACATAGAAGTATATCATC+CGG | + | chr5_4:58172333-58172352 | None:intergenic | 30.0% |
| ATTAATCCAGAAAGATTCTG+TGG | - | chr5_4:58172353-58172372 | Msa0859720:intron | 30.0% | |
| TGATCATATGGAAAGAATTG+AGG | - | chr5_4:58172479-58172498 | Msa0859720:intron | 30.0% | |
| ATGGAAAGAATTGAGGATAT+AGG | - | chr5_4:58172486-58172505 | Msa0859720:intron | 30.0% | |
| ! | GATTGATGATATGACGAAAA+AGG | - | chr5_4:58172696-58172715 | Msa0859720:CDS | 30.0% |
| AATCACTTCACGAAAATTGT+CGG | + | chr5_4:58172725-58172744 | None:intergenic | 30.0% | |
| TCTGACATAAAACAACTTAC+AGG | - | chr5_4:58172820-58172839 | Msa0859720:CDS | 30.0% | |
| GTAACTACATGACATCAATT+TGG | - | chr5_4:58173132-58173151 | Msa0859720:CDS | 30.0% | |
| ! | GATTTTCAAAACATCCAATC+TGG | + | chr5_4:58173224-58173243 | None:intergenic | 30.0% |
| ! | ATCTTTCGAGTATCAAAATG+GGG | - | chr5_4:58173241-58173260 | Msa0859720:intron | 30.0% |
| ATCTGTTTCCTCATTTAATC+AGG | - | chr5_4:58173457-58173476 | Msa0859720:intron | 30.0% | |
| !!! | TAGAGATTTTGGTTAATTGG+AGG | - | chr5_4:58173654-58173673 | Msa0859720:intron | 30.0% |
| !!! | AGAGATTTTGGTTAATTGGA+GGG | - | chr5_4:58173655-58173674 | Msa0859720:intron | 30.0% |
| TAAAACACCTATCACATAGT+AGG | - | chr5_4:58173767-58173786 | Msa0859720:intron | 30.0% | |
| ATTGCATGTTTATGGAGAAA+AGG | + | chr5_4:58173946-58173965 | None:intergenic | 30.0% | |
| CTTACAGTATTGCATGTTTA+TGG | + | chr5_4:58173954-58173973 | None:intergenic | 30.0% | |
| TATCCTTGACAATTCTAACT+AGG | + | chr5_4:58174126-58174145 | None:intergenic | 30.0% | |
| ! | GAAGGAACTGAATTTGAAAT+TGG | + | chr5_4:58174170-58174189 | None:intergenic | 30.0% |
| AATGAACATCAATGGGAAAT+AGG | - | chr5_4:58174329-58174348 | Msa0859720:CDS | 30.0% | |
| !! | AGAATTTTGACCTGTTATTG+TGG | + | chr5_4:58171327-58171346 | None:intergenic | 30.0% |
| AGATCTATGGAAGAAAGAAT+GGG | + | chr5_4:58171506-58171525 | None:intergenic | 30.0% | |
| CATAGATCTCAAAAATCCAA+CGG | - | chr5_4:58171517-58171536 | Msa0859720:intron | 30.0% | |
| TGTAACATCTTGCAATTTAG+TGG | + | chr5_4:58171612-58171631 | None:intergenic | 30.0% | |
| ATTGCAAGATGTTACAATCT+AGG | - | chr5_4:58171616-58171635 | Msa0859720:intron | 30.0% | |
| TAGATGGCCTGTTAATTATT+TGG | - | chr5_4:58171791-58171810 | Msa0859720:intron | 30.0% | |
| AGATGGCCTGTTAATTATTT+GGG | - | chr5_4:58171792-58171811 | Msa0859720:intron | 30.0% | |
| CAACATCCCAAATAATTAAC+AGG | + | chr5_4:58171801-58171820 | None:intergenic | 30.0% | |
| !!! | ATTGTTGTTTTTCTTGTTGG+CGG | - | chr5_4:58171829-58171848 | Msa0859720:intron | 30.0% |
| ! | CTTTTTACAAACAATGCAAC+TGG | + | chr5_4:58171982-58172001 | None:intergenic | 30.0% |
| GTTGCATTGTTTGTAAAAAG+TGG | - | chr5_4:58171982-58172001 | Msa0859720:intron | 30.0% | |
| !! | GACTTATTTTCTTTTGTAGC+TGG | - | chr5_4:58172109-58172128 | Msa0859720:intron | 30.0% |
| ! | ACTGACTTTACTTTCTTTCT+AGG | - | chr5_4:58172288-58172307 | Msa0859720:intron | 30.0% |
| ! | CTACATAGAAGTATATCATC+CGG | + | chr5_4:58172333-58172352 | None:intergenic | 30.0% |
| ATTAATCCAGAAAGATTCTG+TGG | - | chr5_4:58172353-58172372 | Msa0859720:intron | 30.0% | |
| TGATCATATGGAAAGAATTG+AGG | - | chr5_4:58172479-58172498 | Msa0859720:intron | 30.0% | |
| ATGGAAAGAATTGAGGATAT+AGG | - | chr5_4:58172486-58172505 | Msa0859720:intron | 30.0% | |
| ! | GATTGATGATATGACGAAAA+AGG | - | chr5_4:58172696-58172715 | Msa0859720:CDS | 30.0% |
| AATCACTTCACGAAAATTGT+CGG | + | chr5_4:58172725-58172744 | None:intergenic | 30.0% | |
| TCTGACATAAAACAACTTAC+AGG | - | chr5_4:58172820-58172839 | Msa0859720:CDS | 30.0% | |
| GTAACTACATGACATCAATT+TGG | - | chr5_4:58173132-58173151 | Msa0859720:CDS | 30.0% | |
| ! | GATTTTCAAAACATCCAATC+TGG | + | chr5_4:58173224-58173243 | None:intergenic | 30.0% |
| ! | ATCTTTCGAGTATCAAAATG+GGG | - | chr5_4:58173241-58173260 | Msa0859720:intron | 30.0% |
| ATCTGTTTCCTCATTTAATC+AGG | - | chr5_4:58173457-58173476 | Msa0859720:intron | 30.0% | |
| !!! | TAGAGATTTTGGTTAATTGG+AGG | - | chr5_4:58173654-58173673 | Msa0859720:intron | 30.0% |
| !!! | AGAGATTTTGGTTAATTGGA+GGG | - | chr5_4:58173655-58173674 | Msa0859720:intron | 30.0% |
| TAAAACACCTATCACATAGT+AGG | - | chr5_4:58173767-58173786 | Msa0859720:intron | 30.0% | |
| ATTGCATGTTTATGGAGAAA+AGG | + | chr5_4:58173946-58173965 | None:intergenic | 30.0% | |
| CTTACAGTATTGCATGTTTA+TGG | + | chr5_4:58173954-58173973 | None:intergenic | 30.0% | |
| TATCCTTGACAATTCTAACT+AGG | + | chr5_4:58174126-58174145 | None:intergenic | 30.0% | |
| ! | GAAGGAACTGAATTTGAAAT+TGG | + | chr5_4:58174170-58174189 | None:intergenic | 30.0% |
| AATGAACATCAATGGGAAAT+AGG | - | chr5_4:58174329-58174348 | Msa0859720:CDS | 30.0% | |
| TAATTGCAATCAACCAACAC+TGG | - | chr5_4:58170987-58171006 | Msa0859720:intron | 35.0% | |
| AATTGCAATCAACCAACACT+GGG | - | chr5_4:58170988-58171007 | Msa0859720:intron | 35.0% | |
| AGAGAAGAATCGACAAAAAC+AGG | + | chr5_4:58171040-58171059 | None:intergenic | 35.0% | |
| TGGCCATTTACATTTGAAAG+AGG | + | chr5_4:58171081-58171100 | None:intergenic | 35.0% | |
| ACAAAATTGTCTAGCCAACT+GGG | + | chr5_4:58171126-58171145 | None:intergenic | 35.0% | |
| TTTGTCATAGAGCAATGCTA+AGG | - | chr5_4:58171141-58171160 | Msa0859720:intron | 35.0% | |
| !! | ATAGTAAAGAGAGTGTCCAA+TGG | + | chr5_4:58172017-58172036 | None:intergenic | 35.0% |
| TTGGACACTCTCTTTACTAT+TGG | - | chr5_4:58171186-58171205 | Msa0859720:intron | 35.0% | |
| !! | ATTACTTGGTGTGTAAAAGG+TGG | + | chr5_4:58171221-58171240 | None:intergenic | 35.0% |
| !! | CCTATTACTTGGTGTGTAAA+AGG | + | chr5_4:58171224-58171243 | None:intergenic | 35.0% |
| ! | CCTTTTACACACCAAGTAAT+AGG | - | chr5_4:58171221-58171240 | Msa0859720:intron | 35.0% |
| ATAGTATAAACTGGCTAGAG+CGG | + | chr5_4:58171250-58171269 | None:intergenic | 35.0% | |
| ATGTTCTTCTCCACAATAAC+AGG | - | chr5_4:58171314-58171333 | Msa0859720:intron | 35.0% | |
| AGGTGAAAAATTGTCGTCTA+AGG | - | chr5_4:58171423-58171442 | Msa0859720:intron | 35.0% | |
| ! | AAATTGTCGTCTAAGGTTCT+TGG | - | chr5_4:58171430-58171449 | Msa0859720:intron | 35.0% |
| GAGATCTATGGAAGAAAGAA+TGG | + | chr5_4:58171507-58171526 | None:intergenic | 35.0% | |
| !!! | CGTTGGATTTTTGAGATCTA+TGG | + | chr5_4:58171519-58171538 | None:intergenic | 35.0% |
| ! | TTTTCTAATGGAATCACCGT+TGG | + | chr5_4:58171536-58171555 | None:intergenic | 35.0% |
| TGATGGAGATAGAAGAAATG+AGG | - | chr5_4:58171749-58171768 | Msa0859720:intron | 35.0% | |
| TTGGACACTCTCTTTACTAT+TGG | + | chr5_4:58171186-58171205 | None:intergenic | 35.0% | |
| !! | ATAGTAAAGAGAGTGTCCAA+TGG | - | chr5_4:58172017-58172036 | Msa0859720:intron | 35.0% |
| ATGACAAAAGAGCAATGCTA+AGG | + | chr5_4:58172062-58172081 | None:intergenic | 35.0% | |
| !! | TTTGTAGCTGGTTGATGATA+TGG | - | chr5_4:58172121-58172140 | Msa0859720:intron | 35.0% |
| ! | GATTACCTTGATAATCCTGA+AGG | - | chr5_4:58172194-58172213 | Msa0859720:intron | 35.0% |
| AAGTACCTTCAGGATTATCA+AGG | + | chr5_4:58172202-58172221 | None:intergenic | 35.0% | |
| CGAGATTACTAATTACGTTG+AGG | - | chr5_4:58172392-58172411 | Msa0859720:intron | 35.0% | |
| AGATACTGCTGATGATCATA+TGG | - | chr5_4:58172467-58172486 | Msa0859720:intron | 35.0% | |
| AAGAATTGAGGATATAGGTC+AGG | - | chr5_4:58172491-58172510 | Msa0859720:intron | 35.0% | |
| CTTACACGAAGATTTATCCA+CGG | - | chr5_4:58172515-58172534 | Msa0859720:intron | 35.0% | |
| CATATGTATTATACCTTCCG+TGG | + | chr5_4:58172535-58172554 | None:intergenic | 35.0% | |
| TGATGATATGACGAAAAAGG+AGG | - | chr5_4:58172699-58172718 | Msa0859720:CDS | 35.0% | |
| ! | TATACTCCTTGTGTTTTGCA+TGG | + | chr5_4:58172756-58172775 | None:intergenic | 35.0% |
| ! | AAACACAAGGAGTATACTGT+TGG | - | chr5_4:58172760-58172779 | Msa0859720:CDS | 35.0% |
| AGCACTCGTCTATATAATTC+TGG | + | chr5_4:58172789-58172808 | None:intergenic | 35.0% | |
| TGGTAGCATGGTTTAGTAAA+AGG | - | chr5_4:58172959-58172978 | Msa0859720:intron | 35.0% | |
| AGCATGGTTTAGTAAAAGGA+AGG | - | chr5_4:58172963-58172982 | Msa0859720:intron | 35.0% | |
| ! | GATGCCCCAACATAATTTTA+TGG | + | chr5_4:58173271-58173290 | None:intergenic | 35.0% |
| TAAAACAAAGGTGATCTCTG+AGG | - | chr5_4:58173404-58173423 | Msa0859720:intron | 35.0% | |
| TTCTCAGTCCTGATTAAATG+AGG | + | chr5_4:58173468-58173487 | None:intergenic | 35.0% | |
| ! | GTTGGAGCAATTAGAGATTT+TGG | - | chr5_4:58173643-58173662 | Msa0859720:intron | 35.0% |
| GGGCATATCAGTTAGATAAT+TGG | - | chr5_4:58173675-58173694 | Msa0859720:intron | 35.0% | |
| TTTCTCACCTACTATGTGAT+AGG | + | chr5_4:58173777-58173796 | None:intergenic | 35.0% | |
| TTCACTAAGAGCGAAATTGA+GGG | + | chr5_4:58173820-58173839 | None:intergenic | 35.0% | |
| TTTCACTAAGAGCGAAATTG+AGG | + | chr5_4:58173821-58173840 | None:intergenic | 35.0% | |
| ATGCAATACTGTAAGAAACC+AGG | - | chr5_4:58173959-58173978 | Msa0859720:intron | 35.0% | |
| GAAAATGCCAAATAAGAGAC+TGG | + | chr5_4:58174037-58174056 | None:intergenic | 35.0% | |
| TTAACATTGGATCGCTGAAT+TGG | + | chr5_4:58174308-58174327 | None:intergenic | 35.0% | |
| CATATGAATATCGAACTCCT+AGG | - | chr5_4:58174532-58174551 | Msa0859720:CDS | 35.0% | |
| ATGATCACATTATCATGCCT+AGG | + | chr5_4:58174552-58174571 | None:intergenic | 35.0% | |
| ! | AGGCATGATAATGTGATCAT+AGG | - | chr5_4:58174552-58174571 | Msa0859720:CDS | 35.0% |
| ! | GGCATGATAATGTGATCATA+GGG | - | chr5_4:58174553-58174572 | Msa0859720:CDS | 35.0% |
| AGCGAAAATATCATCAATCG+TGG | + | chr5_4:58174583-58174602 | None:intergenic | 35.0% | |
| ATTCTTGGTCTACGAGAATT+TGG | - | chr5_4:58174711-58174730 | Msa0859720:intron | 35.0% | |
| TTCTTGGTCTACGAGAATTT+GGG | - | chr5_4:58174712-58174731 | Msa0859720:intron | 35.0% | |
| TTTGGAAAGAAGAGAAAACG+AGG | + | chr5_4:58174775-58174794 | None:intergenic | 35.0% | |
| TAATTGCAATCAACCAACAC+TGG | - | chr5_4:58170987-58171006 | Msa0859720:intron | 35.0% | |
| AATTGCAATCAACCAACACT+GGG | - | chr5_4:58170988-58171007 | Msa0859720:intron | 35.0% | |
| AGAGAAGAATCGACAAAAAC+AGG | + | chr5_4:58171040-58171059 | None:intergenic | 35.0% | |
| TGGCCATTTACATTTGAAAG+AGG | + | chr5_4:58171081-58171100 | None:intergenic | 35.0% | |
| ACAAAATTGTCTAGCCAACT+GGG | + | chr5_4:58171126-58171145 | None:intergenic | 35.0% | |
| TTTGTCATAGAGCAATGCTA+AGG | - | chr5_4:58171141-58171160 | Msa0859720:intron | 35.0% | |
| !! | ATAGTAAAGAGAGTGTCCAA+TGG | + | chr5_4:58172017-58172036 | None:intergenic | 35.0% |
| TTGGACACTCTCTTTACTAT+TGG | - | chr5_4:58171186-58171205 | Msa0859720:intron | 35.0% | |
| !! | ATTACTTGGTGTGTAAAAGG+TGG | + | chr5_4:58171221-58171240 | None:intergenic | 35.0% |
| !! | CCTATTACTTGGTGTGTAAA+AGG | + | chr5_4:58171224-58171243 | None:intergenic | 35.0% |
| ! | CCTTTTACACACCAAGTAAT+AGG | - | chr5_4:58171221-58171240 | Msa0859720:intron | 35.0% |
| ATAGTATAAACTGGCTAGAG+CGG | + | chr5_4:58171250-58171269 | None:intergenic | 35.0% | |
| ATGTTCTTCTCCACAATAAC+AGG | - | chr5_4:58171314-58171333 | Msa0859720:intron | 35.0% | |
| AGGTGAAAAATTGTCGTCTA+AGG | - | chr5_4:58171423-58171442 | Msa0859720:intron | 35.0% | |
| ! | AAATTGTCGTCTAAGGTTCT+TGG | - | chr5_4:58171430-58171449 | Msa0859720:intron | 35.0% |
| GAGATCTATGGAAGAAAGAA+TGG | + | chr5_4:58171507-58171526 | None:intergenic | 35.0% | |
| !!! | CGTTGGATTTTTGAGATCTA+TGG | + | chr5_4:58171519-58171538 | None:intergenic | 35.0% |
| ! | TTTTCTAATGGAATCACCGT+TGG | + | chr5_4:58171536-58171555 | None:intergenic | 35.0% |
| TGATGGAGATAGAAGAAATG+AGG | - | chr5_4:58171749-58171768 | Msa0859720:intron | 35.0% | |
| TTGGACACTCTCTTTACTAT+TGG | + | chr5_4:58171186-58171205 | None:intergenic | 35.0% | |
| !! | ATAGTAAAGAGAGTGTCCAA+TGG | - | chr5_4:58172017-58172036 | Msa0859720:intron | 35.0% |
| ATGACAAAAGAGCAATGCTA+AGG | + | chr5_4:58172062-58172081 | None:intergenic | 35.0% | |
| !! | TTTGTAGCTGGTTGATGATA+TGG | - | chr5_4:58172121-58172140 | Msa0859720:intron | 35.0% |
| ! | GATTACCTTGATAATCCTGA+AGG | - | chr5_4:58172194-58172213 | Msa0859720:intron | 35.0% |
| AAGTACCTTCAGGATTATCA+AGG | + | chr5_4:58172202-58172221 | None:intergenic | 35.0% | |
| CGAGATTACTAATTACGTTG+AGG | - | chr5_4:58172392-58172411 | Msa0859720:intron | 35.0% | |
| AGATACTGCTGATGATCATA+TGG | - | chr5_4:58172467-58172486 | Msa0859720:intron | 35.0% | |
| AAGAATTGAGGATATAGGTC+AGG | - | chr5_4:58172491-58172510 | Msa0859720:intron | 35.0% | |
| CTTACACGAAGATTTATCCA+CGG | - | chr5_4:58172515-58172534 | Msa0859720:intron | 35.0% | |
| CATATGTATTATACCTTCCG+TGG | + | chr5_4:58172535-58172554 | None:intergenic | 35.0% | |
| TGATGATATGACGAAAAAGG+AGG | - | chr5_4:58172699-58172718 | Msa0859720:CDS | 35.0% | |
| ! | TATACTCCTTGTGTTTTGCA+TGG | + | chr5_4:58172756-58172775 | None:intergenic | 35.0% |
| ! | AAACACAAGGAGTATACTGT+TGG | - | chr5_4:58172760-58172779 | Msa0859720:CDS | 35.0% |
| AGCACTCGTCTATATAATTC+TGG | + | chr5_4:58172789-58172808 | None:intergenic | 35.0% | |
| TGGTAGCATGGTTTAGTAAA+AGG | - | chr5_4:58172959-58172978 | Msa0859720:intron | 35.0% | |
| AGCATGGTTTAGTAAAAGGA+AGG | - | chr5_4:58172963-58172982 | Msa0859720:intron | 35.0% | |
| ! | GATGCCCCAACATAATTTTA+TGG | + | chr5_4:58173271-58173290 | None:intergenic | 35.0% |
| TAAAACAAAGGTGATCTCTG+AGG | - | chr5_4:58173404-58173423 | Msa0859720:intron | 35.0% | |
| TTCTCAGTCCTGATTAAATG+AGG | + | chr5_4:58173468-58173487 | None:intergenic | 35.0% | |
| ! | GTTGGAGCAATTAGAGATTT+TGG | - | chr5_4:58173643-58173662 | Msa0859720:intron | 35.0% |
| GGGCATATCAGTTAGATAAT+TGG | - | chr5_4:58173675-58173694 | Msa0859720:intron | 35.0% | |
| TTTCTCACCTACTATGTGAT+AGG | + | chr5_4:58173777-58173796 | None:intergenic | 35.0% | |
| TTCACTAAGAGCGAAATTGA+GGG | + | chr5_4:58173820-58173839 | None:intergenic | 35.0% | |
| TTTCACTAAGAGCGAAATTG+AGG | + | chr5_4:58173821-58173840 | None:intergenic | 35.0% | |
| ATGCAATACTGTAAGAAACC+AGG | - | chr5_4:58173959-58173978 | Msa0859720:intron | 35.0% | |
| GAAAATGCCAAATAAGAGAC+TGG | + | chr5_4:58174037-58174056 | None:intergenic | 35.0% | |
| TTAACATTGGATCGCTGAAT+TGG | + | chr5_4:58174308-58174327 | None:intergenic | 35.0% | |
| CATATGAATATCGAACTCCT+AGG | - | chr5_4:58174532-58174551 | Msa0859720:CDS | 35.0% | |
| ATGATCACATTATCATGCCT+AGG | + | chr5_4:58174552-58174571 | None:intergenic | 35.0% | |
| ! | AGGCATGATAATGTGATCAT+AGG | - | chr5_4:58174552-58174571 | Msa0859720:CDS | 35.0% |
| ! | GGCATGATAATGTGATCATA+GGG | - | chr5_4:58174553-58174572 | Msa0859720:CDS | 35.0% |
| AGCGAAAATATCATCAATCG+TGG | + | chr5_4:58174583-58174602 | None:intergenic | 35.0% | |
| ATTCTTGGTCTACGAGAATT+TGG | - | chr5_4:58174711-58174730 | Msa0859720:intron | 35.0% | |
| TTCTTGGTCTACGAGAATTT+GGG | - | chr5_4:58174712-58174731 | Msa0859720:intron | 35.0% | |
| TTTGGAAAGAAGAGAAAACG+AGG | + | chr5_4:58174775-58174794 | None:intergenic | 35.0% | |
| GATCTTGTATAGCCTGTTTC+TGG | + | chr5_4:58170913-58170932 | None:intergenic | 40.0% | |
| ACCAGAACATGCACTACTAA+TGG | + | chr5_4:58171101-58171120 | None:intergenic | 40.0% | |
| GACAAAATTGTCTAGCCAAC+TGG | + | chr5_4:58171127-58171146 | None:intergenic | 40.0% | |
| CAATGCTAAGGACAATTGCT+TGG | - | chr5_4:58171153-58171172 | Msa0859720:intron | 40.0% | |
| TAGAGCGGTTTCCTATTACT+TGG | + | chr5_4:58171235-58171254 | None:intergenic | 40.0% | |
| CATCTCTGAACTATTAGCGT+TGG | - | chr5_4:58171287-58171306 | Msa0859720:intron | 40.0% | |
| ! | CAATTTTTCACCTTCCATGG+TGG | + | chr5_4:58171416-58171435 | None:intergenic | 40.0% |
| ! | CGACAATTTTTCACCTTCCA+TGG | + | chr5_4:58171419-58171438 | None:intergenic | 40.0% |
| TTGGAATGAACATGCAGAGA+TGG | - | chr5_4:58171449-58171468 | Msa0859720:intron | 40.0% | |
| ! | GTTTGTAAAAAGTGGTGACG+TGG | - | chr5_4:58171990-58172009 | Msa0859720:intron | 40.0% |
| CAATGCTAAGGACAATTGCT+TGG | + | chr5_4:58171153-58171172 | None:intergenic | 40.0% | |
| TTCTTGAACGATGTGCACAT+TGG | - | chr5_4:58172083-58172102 | Msa0859720:intron | 40.0% | |
| !! | GTTGATGATATGGCTCTTCT+CGG | - | chr5_4:58172131-58172150 | Msa0859720:intron | 40.0% |
| ! | TTGATGATATGGCTCTTCTC+GGG | - | chr5_4:58172132-58172151 | Msa0859720:intron | 40.0% |
| ! | CATAGAAGTATATCATCCGG+AGG | + | chr5_4:58172330-58172349 | None:intergenic | 40.0% |
| AATCCAGAAAGATTCTGTGG+AGG | - | chr5_4:58172356-58172375 | Msa0859720:intron | 40.0% | |
| ATCCAGAAAGATTCTGTGGA+GGG | - | chr5_4:58172357-58172376 | Msa0859720:intron | 40.0% | |
| !! | TTTGCGTCGGTTATCTACTA+GGG | - | chr5_4:58172425-58172444 | Msa0859720:intron | 40.0% |
| TACTCTCCATGCAAAACACA+AGG | - | chr5_4:58172747-58172766 | Msa0859720:CDS | 40.0% | |
| !!! | GTGGGTTTTAAATGGTAGCA+TGG | - | chr5_4:58172947-58172966 | Msa0859720:intron | 40.0% |
| ACAAAAGTCACTGCTTACAC+AGG | + | chr5_4:58173158-58173177 | None:intergenic | 40.0% | |
| !! | TAATCTTTTGAGGGCCAGAT+TGG | - | chr5_4:58173207-58173226 | Msa0859720:intron | 40.0% |
| ! | AAATTATGTTGGGGCATCTC+TGG | - | chr5_4:58173273-58173292 | Msa0859720:intron | 40.0% |
| TCACTAAGAGCGAAATTGAG+GGG | + | chr5_4:58173819-58173838 | None:intergenic | 40.0% | |
| GTGTCTATGTTTGAATCTCC+TGG | + | chr5_4:58173980-58173999 | None:intergenic | 40.0% | |
| GGTCCTAGTTAGAATTGTCA+AGG | - | chr5_4:58174120-58174139 | Msa0859720:intron | 40.0% | |
| !!! | AATACAGTTTTAGGCTGGCA+AGG | + | chr5_4:58174212-58174231 | None:intergenic | 40.0% |
| ! | GCTGCAGTTGTATTTTGCAA+TGG | - | chr5_4:58174600-58174619 | Msa0859720:CDS | 40.0% |
| TTCCATTGGCAAACTCTGTT+TGG | - | chr5_4:58174647-58174666 | Msa0859720:intron | 40.0% | |
| TCCATTGGCAAACTCTGTTT+GGG | - | chr5_4:58174648-58174667 | Msa0859720:intron | 40.0% | |
| TGATCCCAAGGTAAGGATAT+CGG | + | chr5_4:58174749-58174768 | None:intergenic | 40.0% | |
| TAATAGGCTGAACGAGCATT+TGG | + | chr5_4:58174793-58174812 | None:intergenic | 40.0% | |
| GATCTTGTATAGCCTGTTTC+TGG | + | chr5_4:58170913-58170932 | None:intergenic | 40.0% | |
| ACCAGAACATGCACTACTAA+TGG | + | chr5_4:58171101-58171120 | None:intergenic | 40.0% | |
| GACAAAATTGTCTAGCCAAC+TGG | + | chr5_4:58171127-58171146 | None:intergenic | 40.0% | |
| CAATGCTAAGGACAATTGCT+TGG | - | chr5_4:58171153-58171172 | Msa0859720:intron | 40.0% | |
| TAGAGCGGTTTCCTATTACT+TGG | + | chr5_4:58171235-58171254 | None:intergenic | 40.0% | |
| CATCTCTGAACTATTAGCGT+TGG | - | chr5_4:58171287-58171306 | Msa0859720:intron | 40.0% | |
| ! | CAATTTTTCACCTTCCATGG+TGG | + | chr5_4:58171416-58171435 | None:intergenic | 40.0% |
| ! | CGACAATTTTTCACCTTCCA+TGG | + | chr5_4:58171419-58171438 | None:intergenic | 40.0% |
| TTGGAATGAACATGCAGAGA+TGG | - | chr5_4:58171449-58171468 | Msa0859720:intron | 40.0% | |
| ! | GTTTGTAAAAAGTGGTGACG+TGG | - | chr5_4:58171990-58172009 | Msa0859720:intron | 40.0% |
| CAATGCTAAGGACAATTGCT+TGG | + | chr5_4:58171153-58171172 | None:intergenic | 40.0% | |
| TTCTTGAACGATGTGCACAT+TGG | - | chr5_4:58172083-58172102 | Msa0859720:intron | 40.0% | |
| !! | GTTGATGATATGGCTCTTCT+CGG | - | chr5_4:58172131-58172150 | Msa0859720:intron | 40.0% |
| ! | TTGATGATATGGCTCTTCTC+GGG | - | chr5_4:58172132-58172151 | Msa0859720:intron | 40.0% |
| ! | CATAGAAGTATATCATCCGG+AGG | + | chr5_4:58172330-58172349 | None:intergenic | 40.0% |
| AATCCAGAAAGATTCTGTGG+AGG | - | chr5_4:58172356-58172375 | Msa0859720:intron | 40.0% | |
| ATCCAGAAAGATTCTGTGGA+GGG | - | chr5_4:58172357-58172376 | Msa0859720:intron | 40.0% | |
| !! | TTTGCGTCGGTTATCTACTA+GGG | - | chr5_4:58172425-58172444 | Msa0859720:intron | 40.0% |
| TACTCTCCATGCAAAACACA+AGG | - | chr5_4:58172747-58172766 | Msa0859720:CDS | 40.0% | |
| !!! | GTGGGTTTTAAATGGTAGCA+TGG | - | chr5_4:58172947-58172966 | Msa0859720:intron | 40.0% |
| ACAAAAGTCACTGCTTACAC+AGG | + | chr5_4:58173158-58173177 | None:intergenic | 40.0% | |
| !! | TAATCTTTTGAGGGCCAGAT+TGG | - | chr5_4:58173207-58173226 | Msa0859720:intron | 40.0% |
| ! | AAATTATGTTGGGGCATCTC+TGG | - | chr5_4:58173273-58173292 | Msa0859720:intron | 40.0% |
| TCACTAAGAGCGAAATTGAG+GGG | + | chr5_4:58173819-58173838 | None:intergenic | 40.0% | |
| GTGTCTATGTTTGAATCTCC+TGG | + | chr5_4:58173980-58173999 | None:intergenic | 40.0% | |
| GGTCCTAGTTAGAATTGTCA+AGG | - | chr5_4:58174120-58174139 | Msa0859720:intron | 40.0% | |
| !!! | AATACAGTTTTAGGCTGGCA+AGG | + | chr5_4:58174212-58174231 | None:intergenic | 40.0% |
| ! | GCTGCAGTTGTATTTTGCAA+TGG | - | chr5_4:58174600-58174619 | Msa0859720:CDS | 40.0% |
| TTCCATTGGCAAACTCTGTT+TGG | - | chr5_4:58174647-58174666 | Msa0859720:intron | 40.0% | |
| TCCATTGGCAAACTCTGTTT+GGG | - | chr5_4:58174648-58174667 | Msa0859720:intron | 40.0% | |
| TGATCCCAAGGTAAGGATAT+CGG | + | chr5_4:58174749-58174768 | None:intergenic | 40.0% | |
| TAATAGGCTGAACGAGCATT+TGG | + | chr5_4:58174793-58174812 | None:intergenic | 40.0% | |
| AATCAACCAACACTGGGATC+AGG | - | chr5_4:58170994-58171013 | Msa0859720:intron | 45.0% | |
| CAATAACCTGATCCCAGTGT+TGG | + | chr5_4:58171003-58171022 | None:intergenic | 45.0% | |
| GCCATTAGTAGTGCATGTTC+TGG | - | chr5_4:58171097-58171116 | Msa0859720:intron | 45.0% | |
| ATTGCTTGGACACTCTCCAT+TGG | - | chr5_4:58171167-58171186 | Msa0859720:intron | 45.0% | |
| !!! | GTTGTTTTTCTTGTTGGCGG+CGG | - | chr5_4:58171832-58171851 | Msa0859720:intron | 45.0% |
| CAAACAATGCAACTGGAGAC+TGG | + | chr5_4:58171975-58171994 | None:intergenic | 45.0% | |
| ATTGCTTGGTCACTCTCCAT+TGG | + | chr5_4:58172036-58172055 | None:intergenic | 45.0% | |
| ! | GTGCGTGTTAAAGTACCTTC+AGG | + | chr5_4:58172212-58172231 | None:intergenic | 45.0% |
| !! | CTTTGCGTCGGTTATCTACT+AGG | - | chr5_4:58172424-58172443 | Msa0859720:intron | 45.0% |
| CACGAAGATTTATCCACGGA+AGG | - | chr5_4:58172519-58172538 | Msa0859720:intron | 45.0% | |
| CACTAAGAGCGAAATTGAGG+GGG | + | chr5_4:58173818-58173837 | None:intergenic | 45.0% | |
| ACGCAGACCAGTCTCTTATT+TGG | - | chr5_4:58174027-58174046 | Msa0859720:intron | 45.0% | |
| ATAACTGCAGACGCTCACAT+GGG | + | chr5_4:58174508-58174527 | None:intergenic | 45.0% | |
| GACGATGCACATGTTTCCAT+TGG | - | chr5_4:58174633-58174652 | Msa0859720:CDS | 45.0% | |
| TCCCAAACAGAGTTTGCCAA+TGG | + | chr5_4:58174652-58174671 | None:intergenic | 45.0% | |
| TACCCCGATATCCTTACCTT+GGG | - | chr5_4:58174742-58174761 | Msa0859720:intron | 45.0% | |
| ATCCCAAGGTAAGGATATCG+GGG | + | chr5_4:58174747-58174766 | None:intergenic | 45.0% | |
| GATCCCAAGGTAAGGATATC+GGG | + | chr5_4:58174748-58174767 | None:intergenic | 45.0% | |
| AATCAACCAACACTGGGATC+AGG | - | chr5_4:58170994-58171013 | Msa0859720:intron | 45.0% | |
| CAATAACCTGATCCCAGTGT+TGG | + | chr5_4:58171003-58171022 | None:intergenic | 45.0% | |
| GCCATTAGTAGTGCATGTTC+TGG | - | chr5_4:58171097-58171116 | Msa0859720:intron | 45.0% | |
| ATTGCTTGGACACTCTCCAT+TGG | - | chr5_4:58171167-58171186 | Msa0859720:intron | 45.0% | |
| !!! | GTTGTTTTTCTTGTTGGCGG+CGG | - | chr5_4:58171832-58171851 | Msa0859720:intron | 45.0% |
| CAAACAATGCAACTGGAGAC+TGG | + | chr5_4:58171975-58171994 | None:intergenic | 45.0% | |
| ATTGCTTGGTCACTCTCCAT+TGG | + | chr5_4:58172036-58172055 | None:intergenic | 45.0% | |
| ! | GTGCGTGTTAAAGTACCTTC+AGG | + | chr5_4:58172212-58172231 | None:intergenic | 45.0% |
| !! | CTTTGCGTCGGTTATCTACT+AGG | - | chr5_4:58172424-58172443 | Msa0859720:intron | 45.0% |
| CACGAAGATTTATCCACGGA+AGG | - | chr5_4:58172519-58172538 | Msa0859720:intron | 45.0% | |
| CACTAAGAGCGAAATTGAGG+GGG | + | chr5_4:58173818-58173837 | None:intergenic | 45.0% | |
| ACGCAGACCAGTCTCTTATT+TGG | - | chr5_4:58174027-58174046 | Msa0859720:intron | 45.0% | |
| ATAACTGCAGACGCTCACAT+GGG | + | chr5_4:58174508-58174527 | None:intergenic | 45.0% | |
| GACGATGCACATGTTTCCAT+TGG | - | chr5_4:58174633-58174652 | Msa0859720:CDS | 45.0% | |
| TCCCAAACAGAGTTTGCCAA+TGG | + | chr5_4:58174652-58174671 | None:intergenic | 45.0% | |
| TACCCCGATATCCTTACCTT+GGG | - | chr5_4:58174742-58174761 | Msa0859720:intron | 45.0% | |
| ATCCCAAGGTAAGGATATCG+GGG | + | chr5_4:58174747-58174766 | None:intergenic | 45.0% | |
| GATCCCAAGGTAAGGATATC+GGG | + | chr5_4:58174748-58174767 | None:intergenic | 45.0% | |
| !! | AAAAGATTATTATATAAATT+TGG | + | chr5_4:58173196-58173215 | None:intergenic | 5.0% |
| !! | AAAAGATTATTATATAAATT+TGG | + | chr5_4:58173196-58173215 | None:intergenic | 5.0% |
| ! | AGACTGGCTGTATCAGTGTG+TGG | - | chr5_4:58170752-58170771 | Msa0859720:CDS | 50.0% |
| TAACTCGAGATGCTTCCTCC+AGG | - | chr5_4:58170832-58170851 | Msa0859720:intron | 50.0% | |
| !! | GCTGAACAAGCTGCTGATTC+TGG | + | chr5_4:58170880-58170899 | None:intergenic | 50.0% |
| GCAGACAGAAGTCCAGAAAC+AGG | - | chr5_4:58170898-58170917 | Msa0859720:intron | 50.0% | |
| ! | GTGTGTAAAAGGTGGTGACG+TGG | + | chr5_4:58171213-58171232 | None:intergenic | 50.0% |
| GCATCCTCTTAGAACCACCA+TGG | - | chr5_4:58171399-58171418 | Msa0859720:intron | 50.0% | |
| !! | CCTTCCATGGTGGTTCTAAG+AGG | + | chr5_4:58171406-58171425 | None:intergenic | 50.0% |
| CCTCTTAGAACCACCATGGA+AGG | - | chr5_4:58171403-58171422 | Msa0859720:intron | 50.0% | |
| GTGTGCGTCTGAATTGAGTG+AGG | - | chr5_4:58171872-58171891 | Msa0859720:intron | 50.0% | |
| TGCGTCTGAATTGAGTGAGG+AGG | - | chr5_4:58171875-58171894 | Msa0859720:intron | 50.0% | |
| CTCTTCTCGGGATACAAGCT+GGG | - | chr5_4:58172144-58172163 | Msa0859720:intron | 50.0% | |
| TTCCTTTCCTTCGTGTCCTC+CGG | - | chr5_4:58172311-58172330 | Msa0859720:intron | 50.0% | |
| ATATCATCCGGAGGACACGA+AGG | + | chr5_4:58172321-58172340 | None:intergenic | 50.0% | |
| CTCCCTCCACAGAATCTTTC+TGG | + | chr5_4:58172362-58172381 | None:intergenic | 50.0% | |
| CAGAAAGATTCTGTGGAGGG+AGG | - | chr5_4:58172360-58172379 | Msa0859720:intron | 50.0% | |
| AGGAAGCTCTTGCTTTGCGT+CGG | - | chr5_4:58172412-58172431 | Msa0859720:intron | 50.0% | |
| AAGAGCGAAATTGAGGGGGA+AGG | + | chr5_4:58173814-58173833 | None:intergenic | 50.0% | |
| ATGAGCTCAAGCTACAGGTG+TGG | + | chr5_4:58174099-58174118 | None:intergenic | 50.0% | |
| CACCTGTAGCTTGAGCTCAT+CGG | - | chr5_4:58174099-58174118 | Msa0859720:intron | 50.0% | |
| TGACGTCGCAAAATGGGAGA+AGG | + | chr5_4:58174188-58174207 | None:intergenic | 50.0% | |
| CAAGGCTGACGTCGCAAAAT+GGG | + | chr5_4:58174194-58174213 | None:intergenic | 50.0% | |
| CCAGGGGATCAAAAACGTCA+CGG | + | chr5_4:58174480-58174499 | None:intergenic | 50.0% | |
| ! | CGTGACGTTTTTGATCCCCT+GGG | - | chr5_4:58174478-58174497 | Msa0859720:intron | 50.0% |
| CATAACTGCAGACGCTCACA+TGG | + | chr5_4:58174509-58174528 | None:intergenic | 50.0% | |
| TGTGAGCGTCTGCAGTTATG+AGG | - | chr5_4:58174509-58174528 | Msa0859720:CDS | 50.0% | |
| CAAGGTAAGGATATCGGGGT+AGG | + | chr5_4:58174743-58174762 | None:intergenic | 50.0% | |
| CTACCCCGATATCCTTACCT+TGG | - | chr5_4:58174741-58174760 | Msa0859720:intron | 50.0% | |
| AAAACGAGGCAGTGATCCCA+AGG | + | chr5_4:58174761-58174780 | None:intergenic | 50.0% | |
| ! | AGACTGGCTGTATCAGTGTG+TGG | - | chr5_4:58170752-58170771 | Msa0859720:CDS | 50.0% |
| TAACTCGAGATGCTTCCTCC+AGG | - | chr5_4:58170832-58170851 | Msa0859720:intron | 50.0% | |
| !! | GCTGAACAAGCTGCTGATTC+TGG | + | chr5_4:58170880-58170899 | None:intergenic | 50.0% |
| GCAGACAGAAGTCCAGAAAC+AGG | - | chr5_4:58170898-58170917 | Msa0859720:intron | 50.0% | |
| ! | GTGTGTAAAAGGTGGTGACG+TGG | + | chr5_4:58171213-58171232 | None:intergenic | 50.0% |
| GCATCCTCTTAGAACCACCA+TGG | - | chr5_4:58171399-58171418 | Msa0859720:intron | 50.0% | |
| !! | CCTTCCATGGTGGTTCTAAG+AGG | + | chr5_4:58171406-58171425 | None:intergenic | 50.0% |
| CCTCTTAGAACCACCATGGA+AGG | - | chr5_4:58171403-58171422 | Msa0859720:intron | 50.0% | |
| GTGTGCGTCTGAATTGAGTG+AGG | - | chr5_4:58171872-58171891 | Msa0859720:intron | 50.0% | |
| TGCGTCTGAATTGAGTGAGG+AGG | - | chr5_4:58171875-58171894 | Msa0859720:intron | 50.0% | |
| CTCTTCTCGGGATACAAGCT+GGG | - | chr5_4:58172144-58172163 | Msa0859720:intron | 50.0% | |
| TTCCTTTCCTTCGTGTCCTC+CGG | - | chr5_4:58172311-58172330 | Msa0859720:intron | 50.0% | |
| ATATCATCCGGAGGACACGA+AGG | + | chr5_4:58172321-58172340 | None:intergenic | 50.0% | |
| CTCCCTCCACAGAATCTTTC+TGG | + | chr5_4:58172362-58172381 | None:intergenic | 50.0% | |
| CAGAAAGATTCTGTGGAGGG+AGG | - | chr5_4:58172360-58172379 | Msa0859720:intron | 50.0% | |
| AGGAAGCTCTTGCTTTGCGT+CGG | - | chr5_4:58172412-58172431 | Msa0859720:intron | 50.0% | |
| AAGAGCGAAATTGAGGGGGA+AGG | + | chr5_4:58173814-58173833 | None:intergenic | 50.0% | |
| ATGAGCTCAAGCTACAGGTG+TGG | + | chr5_4:58174099-58174118 | None:intergenic | 50.0% | |
| CACCTGTAGCTTGAGCTCAT+CGG | - | chr5_4:58174099-58174118 | Msa0859720:intron | 50.0% | |
| TGACGTCGCAAAATGGGAGA+AGG | + | chr5_4:58174188-58174207 | None:intergenic | 50.0% | |
| CAAGGCTGACGTCGCAAAAT+GGG | + | chr5_4:58174194-58174213 | None:intergenic | 50.0% | |
| CCAGGGGATCAAAAACGTCA+CGG | + | chr5_4:58174480-58174499 | None:intergenic | 50.0% | |
| ! | CGTGACGTTTTTGATCCCCT+GGG | - | chr5_4:58174478-58174497 | Msa0859720:intron | 50.0% |
| CATAACTGCAGACGCTCACA+TGG | + | chr5_4:58174509-58174528 | None:intergenic | 50.0% | |
| TGTGAGCGTCTGCAGTTATG+AGG | - | chr5_4:58174509-58174528 | Msa0859720:CDS | 50.0% | |
| CAAGGTAAGGATATCGGGGT+AGG | + | chr5_4:58174743-58174762 | None:intergenic | 50.0% | |
| CTACCCCGATATCCTTACCT+TGG | - | chr5_4:58174741-58174760 | Msa0859720:intron | 50.0% | |
| AAAACGAGGCAGTGATCCCA+AGG | + | chr5_4:58174761-58174780 | None:intergenic | 50.0% | |
| GTAAGACACCTGCATCAGCC+TGG | + | chr5_4:58170853-58170872 | None:intergenic | 55.0% | |
| GCATGTTCTGGTGACCCAGT+TGG | - | chr5_4:58171109-58171128 | Msa0859720:intron | 55.0% | |
| GCACACATAACCACCGTCCA+TGG | + | chr5_4:58171858-58171877 | None:intergenic | 55.0% | |
| GCTCTTCTCGGGATACAAGC+TGG | - | chr5_4:58172143-58172162 | Msa0859720:intron | 55.0% | |
| ATCCGGAGGACACGAAGGAA+AGG | + | chr5_4:58172316-58172335 | None:intergenic | 55.0% | |
| GACCGATGAGCTCAAGCTAC+AGG | + | chr5_4:58174104-58174123 | None:intergenic | 55.0% | |
| GCAAGGCTGACGTCGCAAAA+TGG | + | chr5_4:58174195-58174214 | None:intergenic | 55.0% | |
| ! | CCGTGACGTTTTTGATCCCC+TGG | - | chr5_4:58174477-58174496 | Msa0859720:intron | 55.0% |
| GCTCACATGGGATAACCCAG+GGG | + | chr5_4:58174496-58174515 | None:intergenic | 55.0% | |
| CGCTCACATGGGATAACCCA+GGG | + | chr5_4:58174497-58174516 | None:intergenic | 55.0% | |
| ACGCTCACATGGGATAACCC+AGG | + | chr5_4:58174498-58174517 | None:intergenic | 55.0% | |
| GAGGCAGTGATCCCAAGGTA+AGG | + | chr5_4:58174756-58174775 | None:intergenic | 55.0% | |
| GTAAGACACCTGCATCAGCC+TGG | + | chr5_4:58170853-58170872 | None:intergenic | 55.0% | |
| GCATGTTCTGGTGACCCAGT+TGG | - | chr5_4:58171109-58171128 | Msa0859720:intron | 55.0% | |
| GCACACATAACCACCGTCCA+TGG | + | chr5_4:58171858-58171877 | None:intergenic | 55.0% | |
| GCTCTTCTCGGGATACAAGC+TGG | - | chr5_4:58172143-58172162 | Msa0859720:intron | 55.0% | |
| ATCCGGAGGACACGAAGGAA+AGG | + | chr5_4:58172316-58172335 | None:intergenic | 55.0% | |
| GACCGATGAGCTCAAGCTAC+AGG | + | chr5_4:58174104-58174123 | None:intergenic | 55.0% | |
| GCAAGGCTGACGTCGCAAAA+TGG | + | chr5_4:58174195-58174214 | None:intergenic | 55.0% | |
| ! | CCGTGACGTTTTTGATCCCC+TGG | - | chr5_4:58174477-58174496 | Msa0859720:intron | 55.0% |
| GCTCACATGGGATAACCCAG+GGG | + | chr5_4:58174496-58174515 | None:intergenic | 55.0% | |
| CGCTCACATGGGATAACCCA+GGG | + | chr5_4:58174497-58174516 | None:intergenic | 55.0% | |
| ACGCTCACATGGGATAACCC+AGG | + | chr5_4:58174498-58174517 | None:intergenic | 55.0% | |
| GAGGCAGTGATCCCAAGGTA+AGG | + | chr5_4:58174756-58174775 | None:intergenic | 55.0% | |
| TGCTTCCTCCAGGCTGATGC+AGG | - | chr5_4:58170842-58170861 | Msa0859720:intron | 60.0% | |
| AGACACCTGCATCAGCCTGG+AGG | + | chr5_4:58170850-58170869 | None:intergenic | 60.0% | |
| TTTCTTGTTGGCGGCGGCCA+TGG | - | chr5_4:58171838-58171857 | Msa0859720:intron | 60.0% | |
| CTCGGGATACAAGCTGGGAG+AGG | - | chr5_4:58172149-58172168 | Msa0859720:intron | 60.0% | |
| TGCTTCCTCCAGGCTGATGC+AGG | - | chr5_4:58170842-58170861 | Msa0859720:intron | 60.0% | |
| AGACACCTGCATCAGCCTGG+AGG | + | chr5_4:58170850-58170869 | None:intergenic | 60.0% | |
| TTTCTTGTTGGCGGCGGCCA+TGG | - | chr5_4:58171838-58171857 | Msa0859720:intron | 60.0% | |
| CTCGGGATACAAGCTGGGAG+AGG | - | chr5_4:58172149-58172168 | Msa0859720:intron | 60.0% | |
| TTGTTGGCGGCGGCCATGGA+CGG | - | chr5_4:58171842-58171861 | Msa0859720:intron | 65.0% | |
| TTGTTGGCGGCGGCCATGGA+CGG | - | chr5_4:58171842-58171861 | Msa0859720:intron | 65.0% | |
| TTGGCGGCGGCCATGGACGG+TGG | - | chr5_4:58171845-58171864 | Msa0859720:intron | 75.0% | |
| TTGGCGGCGGCCATGGACGG+TGG | - | chr5_4:58171845-58171864 | Msa0859720:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 58170705 | 58174813 | 58170705 | ID=Msa0859720;Name=Msa0859720 |
| chr5_4 | mRNA | 58170705 | 58174813 | 58170705 | ID=Msa0859720-mRNA-1;Parent=Msa0859720;Name=Msa0859720-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.33|0.28|0.57|1|1|7|0|293 |
| chr5_4 | exon | 58174793 | 58174813 | 58174793 | ID=Msa0859720-mRNA-1:exon:17738;Parent=Msa0859720-mRNA-1 |
| chr5_4 | exon | 58174503 | 58174664 | 58174503 | ID=Msa0859720-mRNA-1:exon:17737;Parent=Msa0859720-mRNA-1 |
| chr5_4 | exon | 58174283 | 58174390 | 58174283 | ID=Msa0859720-mRNA-1:exon:17736;Parent=Msa0859720-mRNA-1 |
| chr5_4 | exon | 58173303 | 58173390 | 58173303 | ID=Msa0859720-mRNA-1:exon:17735;Parent=Msa0859720-mRNA-1 |
| chr5_4 | exon | 58172978 | 58173208 | 58172978 | ID=Msa0859720-mRNA-1:exon:17734;Parent=Msa0859720-mRNA-1 |
| chr5_4 | exon | 58172677 | 58172844 | 58172677 | ID=Msa0859720-mRNA-1:exon:17733;Parent=Msa0859720-mRNA-1 |
| chr5_4 | exon | 58170705 | 58170808 | 58170705 | ID=Msa0859720-mRNA-1:exon:17732;Parent=Msa0859720-mRNA-1 |
| chr5_4 | CDS | 58174793 | 58174813 | 58174793 | ID=Msa0859720-mRNA-1:cds;Parent=Msa0859720-mRNA-1 |
| chr5_4 | CDS | 58174503 | 58174664 | 58174503 | ID=Msa0859720-mRNA-1:cds;Parent=Msa0859720-mRNA-1 |
| chr5_4 | CDS | 58174283 | 58174390 | 58174283 | ID=Msa0859720-mRNA-1:cds;Parent=Msa0859720-mRNA-1 |
| chr5_4 | CDS | 58173303 | 58173390 | 58173303 | ID=Msa0859720-mRNA-1:cds;Parent=Msa0859720-mRNA-1 |
| chr5_4 | CDS | 58172978 | 58173208 | 58172978 | ID=Msa0859720-mRNA-1:cds;Parent=Msa0859720-mRNA-1 |
| chr5_4 | CDS | 58172677 | 58172844 | 58172677 | ID=Msa0859720-mRNA-1:cds;Parent=Msa0859720-mRNA-1 |
| chr5_4 | CDS | 58170705 | 58170808 | 58170705 | ID=Msa0859720-mRNA-1:cds;Parent=Msa0859720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
