AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0862090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0862090 MtrunA17_Chr5g0443331 82.075 318 9 1 1 318 1 270 0.0 504
Msa0862090 MtrunA17_Chr3g0096451 67.917 240 69 4 65 298 17 254 4.23e-96 285
Msa0862090 MtrunA17_Chr7g0271411 64.706 85 30 0 156 240 160 244 1.72e-31 119
Msa0862090 MtrunA17_Chr2g0304061 61.538 91 34 1 156 246 158 247 2.99e-31 119
Msa0862090 MtrunA17_Chr1g0193131 58.333 84 34 1 153 236 417 499 5.46e-27 111
Msa0862090 MtrunA17_Chr8g0381081 46.667 120 61 2 129 247 32 149 6.03e-26 101
Msa0862090 MtrunA17_Chr4g0040911 44.915 118 55 3 156 272 37 145 7.18e-25 98.6
Msa0862090 MtrunA17_Chr4g0075031 43.750 112 58 2 151 257 377 488 9.45e-25 104
Msa0862090 MtrunA17_Chr8g0380231 61.429 70 27 0 164 233 25 94 1.22e-24 95.9
Msa0862090 MtrunA17_Chr8g0378361 50.485 103 49 2 154 255 28 129 1.35e-24 98.2
Msa0862090 MtrunA17_Chr1g0177171 48.889 90 45 1 153 241 403 492 5.05e-24 102
Msa0862090 MtrunA17_Chr8g0378381 51.087 92 43 2 150 240 26 116 5.19e-24 94.7
Msa0862090 MtrunA17_Chr8g0378371 47.959 98 48 2 145 242 22 116 2.09e-22 90.5
Msa0862090 MtrunA17_Chr8g0378621 34.831 178 86 5 139 302 336 497 1.80e-21 94.7
Msa0862090 MtrunA17_Chr8g0378401 49.451 91 44 2 150 239 26 115 3.02e-21 87.4
Msa0862090 MtrunA17_Chr6g0487261 42.157 102 57 2 149 248 362 463 3.15e-21 94.0
Msa0862090 MtrunA17_Chr8g0389741 44.898 98 53 1 143 239 355 452 3.93e-21 93.6
Msa0862090 MtrunA17_Chr5g0401301 50.000 86 41 2 156 239 329 414 4.23e-21 93.2
Msa0862090 MtrunA17_Chr1g0154991 42.373 118 49 4 125 239 2 103 5.28e-21 86.3
Msa0862090 MtrunA17_Chr4g0043511 41.525 118 64 3 133 246 394 510 1.85e-20 91.7
Msa0862090 MtrunA17_Chr3g0120401 45.455 88 46 2 156 242 157 243 2.46e-20 88.2
Msa0862090 MtrunA17_Chr3g0121271 45.361 97 52 1 152 247 358 454 3.07e-20 90.9
Msa0862090 MtrunA17_Chr5g0447651 48.235 85 43 1 156 239 30 114 4.52e-20 84.3
Msa0862090 MtrunA17_Chr4g0034901 47.826 92 47 1 154 244 373 464 5.13e-20 90.1
Msa0862090 MtrunA17_Chr5g0439251 47.619 84 43 1 151 233 377 460 3.61e-19 87.8
Msa0862090 MtrunA17_Chr5g0434591 41.935 93 53 1 151 242 355 447 1.34e-18 86.3
Msa0862090 MtrunA17_Chr3g0110371 40.860 93 54 1 151 242 356 448 8.16e-18 84.0
Msa0862090 MtrunA17_Chr8g0339191 40.217 92 54 1 152 242 370 461 1.28e-17 83.2
Msa0862090 MtrunA17_Chr1g0161011 41.284 109 62 2 132 239 338 445 1.44e-17 83.2
Msa0862090 MtrunA17_Chr1g0213651 44.318 88 47 2 153 239 273 359 2.65e-17 81.6
Msa0862090 MtrunA17_Chr4g0076131 41.860 86 49 1 155 239 27 112 2.77e-17 76.6
Msa0862090 MtrunA17_Chr7g0234821 38.710 93 56 1 152 243 370 462 4.59e-16 78.6
Msa0862090 MtrunA17_Chr4g0076141 45.570 79 42 1 156 233 13 91 5.01e-16 72.8
Msa0862090 MtrunA17_Chr7g0223961 42.857 91 50 2 149 238 358 447 1.27e-15 77.0
Msa0862090 MtrunA17_Chr5g0419121 43.158 95 50 3 151 242 17 110 2.23e-15 74.7
Msa0862090 MtrunA17_Chr4g0061401 42.857 91 49 3 150 239 18 106 7.69e-15 72.4
Msa0862090 MtrunA17_Chr4g0043151 44.944 89 46 3 156 242 21 108 5.61e-14 69.3
Msa0862090 MtrunA17_Chr3g0144531 40.909 110 56 5 138 244 356 459 7.82e-14 71.6
Msa0862090 MtrunA17_Chr2g0313891 36.842 95 57 2 146 239 20 112 1.09e-13 66.6
Msa0862090 MtrunA17_Chr4g0062771 35.965 114 66 5 154 265 372 480 2.54e-12 67.4
Msa0862090 MtrunA17_Chr4g0046311 40.964 83 48 1 152 233 369 451 8.21e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0862090 AT2G30933.1 47.904 167 81 1 131 291 57 223 9.56e-49 163
Msa0862090 AT2G30933.2 53.398 103 48 0 131 233 57 159 2.15e-33 120
Msa0862090 AT2G30933.3 53.398 103 48 0 131 233 57 159 2.15e-33 120
Msa0862090 AT1G29380.3 61.364 88 34 0 156 243 148 235 6.90e-32 120
Msa0862090 AT1G09460.1 59.184 98 38 1 149 246 130 225 4.07e-31 119
Msa0862090 AT1G29380.1 61.905 84 32 0 156 239 148 231 4.81e-31 119
Msa0862090 AT1G29380.4 64.103 78 28 0 156 233 148 225 3.68e-29 112
Msa0862090 AT1G29380.2 64.103 78 28 0 156 233 148 225 3.68e-29 112
Msa0862090 AT3G58100.1 39.286 140 84 1 156 294 41 180 7.55e-28 107
Msa0862090 AT3G58100.2 39.286 140 84 1 156 294 117 256 1.45e-27 108
Msa0862090 AT4G05430.1 50.000 96 47 1 153 247 20 115 1.05e-25 100
Msa0862090 AT5G55180.1 52.222 90 42 1 153 241 369 458 1.18e-25 106
Msa0862090 AT4G05430.3 50.000 96 47 1 153 247 45 140 1.23e-25 100
Msa0862090 AT2G05790.1 44.643 112 54 2 138 241 359 470 1.73e-23 100
Msa0862090 AT4G26830.1 48.352 91 46 1 152 241 363 453 2.63e-23 100
Msa0862090 AT4G26830.2 48.352 91 46 1 152 241 367 457 2.65e-23 100
Msa0862090 AT4G13600.1 44.545 110 54 3 156 264 61 164 4.33e-23 95.9
Msa0862090 AT4G05430.2 53.012 83 38 1 152 233 44 126 8.91e-23 92.0
Msa0862090 AT5G55180.2 54.878 82 36 1 153 233 369 450 1.14e-22 98.2
Msa0862090 AT4G34480.3 50.000 88 42 2 154 240 251 337 5.62e-22 95.5
Msa0862090 AT4G34480.1 50.000 88 42 2 154 240 362 448 1.14e-21 95.5
Msa0862090 AT1G11820.2 48.315 89 45 1 155 242 380 468 2.01e-21 95.1
Msa0862090 AT2G01630.1 36.735 147 81 3 123 257 316 462 3.99e-21 94.0
Msa0862090 AT5G67460.1 47.059 85 44 1 156 239 293 377 9.43e-21 92.0
Msa0862090 AT5G35740.1 49.438 89 41 3 154 239 28 115 1.09e-20 86.3
Msa0862090 AT5G63225.1 41.489 94 53 2 147 239 16 108 1.22e-19 83.2
Msa0862090 AT5G67460.2 49.367 79 39 1 156 233 293 371 1.46e-19 88.6
Msa0862090 AT1G66870.2 40.449 89 52 1 152 239 49 137 2.05e-19 83.2
Msa0862090 AT5G63230.1 41.489 94 53 2 147 239 17 109 2.42e-19 82.4
Msa0862090 AT1G66870.1 40.449 89 52 1 152 239 22 110 3.26e-19 82.0
Msa0862090 AT1G66250.1 45.556 90 48 1 151 239 363 452 4.80e-19 87.8
Msa0862090 AT4G29360.2 47.059 85 44 1 156 239 401 485 5.35e-19 87.8
Msa0862090 AT4G29360.1 47.059 85 44 1 156 239 391 475 6.10e-19 87.8
Msa0862090 AT2G16230.1 45.652 92 48 2 156 246 366 456 1.04e-18 87.0
Msa0862090 AT1G66852.1 39.773 88 53 0 152 239 22 109 1.32e-18 80.5
Msa0862090 AT1G11820.3 47.619 84 43 1 151 233 376 459 1.37e-18 86.7
Msa0862090 AT4G16165.1 42.697 89 50 1 152 239 22 110 1.75e-18 80.1
Msa0862090 AT1G66855.1 35.455 110 69 2 131 239 2 110 3.44e-18 79.3
Msa0862090 AT3G55430.1 42.391 92 51 2 149 239 359 449 4.23e-18 84.7
Msa0862090 AT2G39640.1 43.011 93 51 2 149 240 352 443 6.67e-18 84.7
Msa0862090 AT2G39640.1 36.842 95 58 2 151 244 455 548 1.98e-15 77.4
Msa0862090 AT2G04910.2 44.828 87 47 1 154 239 13 99 7.95e-18 78.2
Msa0862090 AT5G56590.1 43.529 85 47 1 156 239 369 453 8.17e-18 84.3
Msa0862090 AT3G13560.4 45.977 87 46 1 154 239 360 446 2.54e-17 82.8
Msa0862090 AT3G13560.1 45.977 87 46 1 154 239 360 446 2.54e-17 82.8
Msa0862090 AT3G13560.2 45.977 87 46 1 154 239 360 446 2.54e-17 82.8
Msa0862090 AT3G13560.5 45.977 87 46 1 154 239 360 446 2.54e-17 82.8
Msa0862090 AT3G13560.3 45.977 87 46 1 154 239 360 446 2.54e-17 82.8
Msa0862090 AT4G09465.1 37.755 98 59 2 145 241 20 116 4.19e-17 76.3
Msa0862090 AT4G09464.1 37.755 98 59 2 145 241 20 116 4.50e-17 76.3
Msa0862090 AT4G09467.1 37.755 98 59 2 145 241 20 116 4.50e-17 76.3
Msa0862090 AT5G63250.1 38.739 111 59 3 130 237 22 126 5.35e-17 76.6
Msa0862090 AT2G42930.1 43.590 78 43 1 156 233 40 116 6.42e-17 76.6
Msa0862090 AT2G01630.3 37.398 123 65 3 123 233 316 438 6.57e-17 81.3
Msa0862090 AT4G09462.1 39.785 93 54 2 150 241 23 114 8.27e-17 75.5
Msa0862090 AT1G18650.2 39.785 93 54 2 152 243 17 108 1.31e-16 75.5
Msa0862090 AT2G04910.1 47.500 80 41 1 155 233 14 93 1.38e-16 75.1
Msa0862090 AT4G09466.1 37.755 98 59 2 145 241 20 116 1.48e-16 75.1
Msa0862090 AT1G18650.1 39.362 94 55 2 152 244 17 109 1.97e-16 76.6
Msa0862090 AT5G53610.1 38.542 96 56 2 145 239 17 110 3.98e-16 73.6
Msa0862090 AT5G63240.1 39.326 89 51 2 156 241 40 128 4.48e-16 73.9
Msa0862090 AT5G61130.1 43.333 90 49 2 152 240 17 105 5.63e-16 75.5
Msa0862090 AT5G53600.1 39.326 89 51 2 150 237 23 109 6.45e-16 73.2
Msa0862090 AT1G79480.1 41.176 85 48 2 156 239 311 394 6.45e-16 78.2
Msa0862090 AT1G79480.2 41.176 85 48 2 156 239 310 393 6.79e-16 78.2
Msa0862090 AT4G09090.1 38.776 98 58 2 145 241 20 116 7.55e-16 73.2
Msa0862090 AT5G24318.1 41.111 90 51 2 151 239 367 455 2.11e-15 77.0
Msa0862090 AT5G24318.3 41.111 90 51 2 151 239 228 316 2.19e-15 75.9
Msa0862090 AT3G23770.1 39.806 103 60 2 142 243 374 475 5.69e-15 75.9
Msa0862090 AT1G78520.1 41.860 86 47 2 155 239 31 114 1.77e-14 69.3
Msa0862090 AT2G29735.1 37.755 98 57 3 145 239 20 116 8.52e-14 67.4
Msa0862090 AT2G43670.1 42.697 89 48 2 152 239 31 117 1.09e-13 67.4
Msa0862090 AT1G26450.1 36.620 142 72 6 152 278 17 155 1.81e-13 68.6
Msa0862090 AT3G07320.1 37.895 95 58 1 150 243 365 459 2.04e-13 70.9
Msa0862090 AT5G08000.2 44.944 89 47 2 153 240 37 124 2.77e-13 68.2
Msa0862090 AT4G14080.1 35.398 113 60 2 132 243 377 477 4.15e-13 70.1
Msa0862090 AT5G24318.2 40.476 84 48 2 151 233 367 449 1.13e-12 68.6
Msa0862090 AT1G69295.2 40.909 88 49 3 150 236 11 96 1.82e-12 66.2
Msa0862090 AT1G69295.1 40.698 86 48 3 152 236 17 100 2.26e-12 65.9
Msa0862090 AT5G08000.1 44.318 88 47 2 154 240 19 105 5.02e-12 64.3
Msa0862090 AT2G03505.3 37.234 94 55 3 152 242 17 109 2.12e-11 60.8
Msa0862090 AT2G03505.4 37.234 94 55 3 152 242 17 109 5.53e-11 60.8
Msa0862090 AT2G03505.1 37.234 94 55 3 152 242 17 109 5.53e-11 60.8
Msa0862090 AT2G03505.2 37.234 94 55 3 152 242 17 109 5.53e-11 60.8
Msa0862090 AT5G64790.1 35.052 97 56 5 154 247 367 459 7.66e-11 63.2

Find 76 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGGATTATATCATTTC+TGG 0.122767 5_4:+61665074 Msa0862090:CDS
GTTCCAAATAGCTGCAATTT+TGG 0.156361 5_4:+61663690 Msa0862090:CDS
CCACCAAAATTGCAGCTATT+TGG 0.187614 5_4:-61663693 None:intergenic
GCAAGATCATGAATAGAATT+TGG 0.189393 5_4:-61663630 None:intergenic
CTTATGATAATACTTATTAA+AGG 0.218122 5_4:-61663661 None:intergenic
TGCTTTGACTGTTACATATA+GGG 0.244232 5_4:+61662274 Msa0862090:CDS
CCACCTCACCTTTGCCTATC+AGG 0.256877 5_4:+61661449 Msa0862090:five_prime_UTR
CTGCTTTGACTGTTACATAT+AGG 0.299560 5_4:+61662273 Msa0862090:CDS
TTGGAGTGGTAATATCCTTT+TGG 0.304034 5_4:-61663350 None:intergenic
TTGGACTATGCTTGTGGATA+TGG 0.309146 5_4:+61663561 Msa0862090:CDS
TCAAGTGGTGCCAACGTCTT+TGG 0.319971 5_4:+61664973 Msa0862090:CDS
ACTGTGTCTGGATTGGAATT+AGG 0.334079 5_4:-61663417 None:intergenic
GAAGATATTCACCTTGTTGA+TGG 0.335720 5_4:-61664831 None:intergenic
AGTCCAAGTGCGTCGCAAAT+TGG 0.359009 5_4:+61663525 Msa0862090:CDS
ATTGTTGGAATGATAGTAAT+TGG 0.380518 5_4:-61663369 None:intergenic
TCAACTAAAAGTATATATAT+TGG 0.400132 5_4:-61661493 None:intergenic
GGAAAGCTATTAAATGTGAC+AGG 0.414748 5_4:-61665036 None:intergenic
CAAAATTTCTACTGTCCAAA+AGG 0.417042 5_4:+61663335 Msa0862090:CDS
ACTGTGGTTGGATTGGTATA+TGG 0.421011 5_4:-61663459 None:intergenic
AAATTGCAGCTATTTGGAAC+AGG 0.446661 5_4:-61663687 None:intergenic
GGATCAGGTGTTGTAATTGT+TGG 0.447684 5_4:-61663384 None:intergenic
CAACTTGAACCTGAAGAGAT+TGG 0.452977 5_4:-61663492 None:intergenic
CAATAAAATCAAAGATGAAA+AGG 0.460561 5_4:+61661593 Msa0862090:exon
GTGGTGGTGCAGAAGAAAGT+TGG 0.461223 5_4:-61661430 None:intergenic
GAAACTGCATGTGGAAGTAC+TGG 0.461877 5_4:-61662228 None:intergenic
AGAGTGTGTGTGGGCCTGAT+AGG 0.462542 5_4:-61661463 None:intergenic
CAGTTTCTTGAAAACATACA+AGG 0.471693 5_4:+61662244 Msa0862090:CDS
AGAGTTCACTGTGGTTGGAT+TGG 0.472122 5_4:-61663466 None:intergenic
AAACCAATTTGCGACGCACT+TGG 0.472200 5_4:-61663528 None:intergenic
GGAAAAGAGTTCACTGTGGT+TGG 0.477837 5_4:-61663471 None:intergenic
TTGGAATTAGGATTCAGAAA+TGG 0.481005 5_4:-61663405 None:intergenic
AATTGGTTTACAAGTTGCAT+TGG 0.485805 5_4:+61663542 Msa0862090:CDS
GGAGATGGATTGGTGGGCAC+TGG 0.496290 5_4:-61665003 None:intergenic
CAATCTCTTCAGGTTCAAGT+TGG 0.498178 5_4:+61663493 Msa0862090:CDS
AGCAAAGGATTTGAGTTAGT+AGG 0.502237 5_4:-61661642 None:intergenic
TTTCAAATTCAGGTTCAAGT+AGG 0.505311 5_4:+61663241 Msa0862090:CDS
AGGTTCAAGTAGGACAGAAA+AGG 0.511879 5_4:+61663251 Msa0862090:CDS
TGGAGAAACTGTGTCTGGAT+TGG 0.515061 5_4:-61663424 None:intergenic
GGAAGTACTGGAGAAAAGGT+TGG 0.517972 5_4:-61662216 None:intergenic
GAAGTTGGAGAAACTGTGTC+TGG 0.524569 5_4:-61663429 None:intergenic
GTATATGGAAGTGTTGAAGT+TGG 0.524882 5_4:-61663444 None:intergenic
GGCAGCAGAAGGAGATGGAT+TGG 0.536154 5_4:-61665013 None:intergenic
TTAGGATTCAGAAATGGATC+AGG 0.539217 5_4:-61663399 None:intergenic
CTAACTCAAATCCTTTGCTC+AGG 0.540740 5_4:+61661646 Msa0862090:CDS
TATGTAACAGTCAAAGCAGT+TGG 0.542439 5_4:-61662269 None:intergenic
ACAGGGGCAGCAGAAGGAGA+TGG 0.553641 5_4:-61665018 None:intergenic
GCTTTGACTGTTACATATAG+GGG 0.563106 5_4:+61662275 Msa0862090:CDS
GGATTGTAACAGCTTCCACC+TGG 0.564041 5_4:-61663609 None:intergenic
TGGTGGTGGTAGAGTGTGTG+TGG 0.564930 5_4:-61661473 None:intergenic
CCTGATAGGCAAAGGTGAGG+TGG 0.566755 5_4:-61661449 None:intergenic
ACTGTTACATATAGGGGTCT+CGG 0.567797 5_4:+61662281 Msa0862090:CDS
GTGGTGCAGAAGAAAGTTGG+AGG 0.568899 5_4:-61661427 None:intergenic
ACTAAAAGTATATATATTGG+TGG 0.570261 5_4:-61661490 None:intergenic
AGCAGAAGGAGATGGATTGG+TGG 0.570770 5_4:-61665010 None:intergenic
AAAAGTATATATATTGGTGG+TGG 0.575473 5_4:-61661487 None:intergenic
ATGTGGAAGTACTGGAGAAA+AGG 0.575987 5_4:-61662220 None:intergenic
AATGTGACAGGGGCAGCAGA+AGG 0.582348 5_4:-61665024 None:intergenic
GCAGAAGGAGATGGATTGGT+GGG 0.582705 5_4:-61665009 None:intergenic
GATAGGCAAAGGTGAGGTGG+TGG 0.615749 5_4:-61661446 None:intergenic
GACTATGCTTGTGGATATGG+TGG 0.626503 5_4:+61663564 Msa0862090:CDS
GGTGGTGGTAGAGTGTGTGT+GGG 0.627080 5_4:-61661472 None:intergenic
GTTGCATTGGACTATGCTTG+TGG 0.627104 5_4:+61663555 Msa0862090:CDS
TTGAACACGACAAACTCAAG+TGG 0.629769 5_4:+61664958 Msa0862090:CDS
CATGTCAATATCCATCAACA+AGG 0.637033 5_4:+61664820 Msa0862090:CDS
GATTGTTCAGCAATTCAACC+AGG 0.642617 5_4:+61663591 Msa0862090:CDS
GAAAGCTATTAAATGTGACA+GGG 0.652194 5_4:-61665035 None:intergenic
TGTTCAGCAATTCAACCAGG+TGG 0.657408 5_4:+61663594 Msa0862090:CDS
TGGCACTGAACCAAAGACGT+TGG 0.674641 5_4:-61664983 None:intergenic
ATATAGGGGTCTCGGTACAG+AGG 0.685971 5_4:+61662289 Msa0862090:CDS
AGTTTCTTGAAAACATACAA+GGG 0.693701 5_4:+61662245 Msa0862090:CDS
GGGCCTGATAGGCAAAGGTG+AGG 0.696029 5_4:-61661452 None:intergenic
TGGTGCAGAAGAAAGTTGGA+GGG 0.707274 5_4:-61661426 None:intergenic
TGGAATGATAGTAATTGGAG+TGG 0.718590 5_4:-61663364 None:intergenic
AAAGCTATTAAATGTGACAG+GGG 0.721619 5_4:-61665034 None:intergenic
TGTGTGGGCCTGATAGGCAA+AGG 0.729290 5_4:-61661457 None:intergenic
GATTGGAAAAGAGTTCACTG+TGG 0.779647 5_4:-61663475 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTTTTATCTTTATTATTT+TGG + chr5_4:61661857-61661876 Msa0862090:intron 10.0%
!! AAAAAGAAGATATAAATTTA+TGG - chr5_4:61662045-61662064 None:intergenic 10.0%
!!! AAATTTATATCTTCTTTTTA+TGG + chr5_4:61662046-61662065 Msa0862090:intron 10.0%
!!! ATAAAATATCAAAGTAATTT+TGG + chr5_4:61664040-61664059 Msa0862090:intron 10.0%
!!! TAAAATATCAAAGTAATTTT+GGG + chr5_4:61664041-61664060 Msa0862090:intron 10.0%
!!! ATGATTTTTTTTTTTTTTGA+GGG - chr5_4:61664398-61664417 None:intergenic 10.0%
!!! ATCAATTTTTATTTACTTTT+CGG - chr5_4:61664596-61664615 None:intergenic 10.0%
!!! TTATAAATTCATTTTACTTT+TGG + chr5_4:61664742-61664761 Msa0862090:intron 10.0%
!!! TCAACTAAAAGTATATATAT+TGG - chr5_4:61661496-61661515 None:intergenic 15.0%
!! TAATTATTATATTATGCCTT+TGG - chr5_4:61662552-61662571 None:intergenic 15.0%
!!! GAAAATAGTTTTTTTTAGTT+GGG + chr5_4:61662619-61662638 Msa0862090:intron 15.0%
!! AAATTGACAATACAATATAT+GGG - chr5_4:61663046-61663065 None:intergenic 15.0%
!! AAAATTGACAATACAATATA+TGG - chr5_4:61663047-61663066 None:intergenic 15.0%
!! CTTATGATAATACTTATTAA+AGG - chr5_4:61663664-61663683 None:intergenic 15.0%
!! TTTGAATTTGATATAACTAA+AGG - chr5_4:61663805-61663824 None:intergenic 15.0%
!!! AAAATATCAAAGTAATTTTG+GGG + chr5_4:61664042-61664061 Msa0862090:intron 15.0%
!!! ATATTTTTATTGTCCATATA+TGG - chr5_4:61664084-61664103 None:intergenic 15.0%
!!! CATGATTTTTTTTTTTTTTG+AGG - chr5_4:61664399-61664418 None:intergenic 15.0%
!! TATTCTTAAGAAAATAAAGT+TGG - chr5_4:61664673-61664692 None:intergenic 15.0%
!!! ACTTTATTTTCTTAAGAATA+AGG + chr5_4:61664673-61664692 Msa0862090:intron 15.0%
!!! TTAACTTGTTTAAATTTTGT+AGG + chr5_4:61664789-61664808 Msa0862090:intron 15.0%
!!! TTTTTCAAAATTGATGATTA+TGG - chr5_4:61665112-61665131 None:intergenic 15.0%
!!! ATCATCAATTTTGAAAAATA+TGG + chr5_4:61665114-61665133 Msa0862090:CDS 15.0%
!!! ACTAAAAGTATATATATTGG+TGG - chr5_4:61661493-61661512 None:intergenic 20.0%
!! CAATAAAATCAAAGATGAAA+AGG + chr5_4:61661593-61661612 Msa0862090:exon 20.0%
!!! ATTTTTTAGTTCAACTAACA+TGG + chr5_4:61661948-61661967 Msa0862090:intron 20.0%
!! ACATGGTTATATATTTATGT+TGG + chr5_4:61661965-61661984 Msa0862090:intron 20.0%
!! TATATTTATGTTGGACTAAT+TGG + chr5_4:61661974-61661993 Msa0862090:intron 20.0%
!!! ATTTGAAACAATAGAGATTA+GGG + chr5_4:61662369-61662388 Msa0862090:intron 20.0%
!!! GGAAAATAGTTTTTTTTAGT+TGG + chr5_4:61662618-61662637 Msa0862090:intron 20.0%
!! GTTAATGTAGTTTCAATATT+TGG - chr5_4:61663024-61663043 None:intergenic 20.0%
!!! TCAATTATGTTTTCAAATTC+AGG + chr5_4:61663231-61663250 Msa0862090:CDS 20.0%
!! TGCAATTAACATTATTGTAA+AGG - chr5_4:61663781-61663800 None:intergenic 20.0%
!! TCTATTGAAAGATACAATAA+AGG - chr5_4:61664224-61664243 None:intergenic 20.0%
!! AATTTATGCATAATTTATGG+AGG - chr5_4:61664375-61664394 None:intergenic 20.0%
!! AAACATAAATATGTTATCCA+AGG - chr5_4:61664472-61664491 None:intergenic 20.0%
!!! TAAGAATAAGGTTTTATACA+AGG + chr5_4:61664685-61664704 Msa0862090:intron 20.0%
!! GAAATTAGAAGTAATATGTA+TGG - chr5_4:61664856-61664875 None:intergenic 20.0%
!! AAAAGTATATATATTGGTGG+TGG - chr5_4:61661490-61661509 None:intergenic 25.0%
! ACAAAAAGTAAGAGAATAGA+AGG + chr5_4:61661545-61661564 Msa0862090:five_prime_UTR 25.0%
!! TTCACTTCTTCTATAGTTTT+TGG + chr5_4:61661680-61661699 Msa0862090:intron 25.0%
! ATTCATTATTATCATCTGCA+TGG + chr5_4:61661828-61661847 Msa0862090:intron 25.0%
! TAAAGCAATTGAATCCTATA+AGG - chr5_4:61661917-61661936 None:intergenic 25.0%
!! CAAACATTTTGTTGCAATTA+AGG - chr5_4:61662086-61662105 None:intergenic 25.0%
! TTGATTATCATCTTTCACAT+TGG + chr5_4:61662183-61662202 Msa0862090:intron 25.0%
! TGATTATCATCTTTCACATT+GGG + chr5_4:61662184-61662203 Msa0862090:intron 25.0%
! AGTTTCTTGAAAACATACAA+GGG + chr5_4:61662245-61662264 Msa0862090:CDS 25.0%
!! CATTTGAAACAATAGAGATT+AGG + chr5_4:61662368-61662387 Msa0862090:intron 25.0%
! TTAATGAATATTACGACATC+TGG - chr5_4:61662867-61662886 None:intergenic 25.0%
! TGTCGTAATATTCATTAACT+AGG + chr5_4:61662869-61662888 Msa0862090:intron 25.0%
! TTGGTTAATTATGTTTAGCA+TGG - chr5_4:61663005-61663024 None:intergenic 25.0%
!!! TTCATTTTTAATGCCACTTA+AGG + chr5_4:61663146-61663165 Msa0862090:intron 25.0%
! AAGGCTCATATCAATATATT+TGG + chr5_4:61663165-61663184 Msa0862090:intron 25.0%
! ATTGTTGGAATGATAGTAAT+TGG - chr5_4:61663372-61663391 None:intergenic 25.0%
! GTTGCAATGAAAATTATGAT+AGG - chr5_4:61663759-61663778 None:intergenic 25.0%
! AGCTTAATTACTCTATGATT+TGG + chr5_4:61663942-61663961 Msa0862090:intron 25.0%
! ACAAAAAAGTGGAAAAAGAA+AGG - chr5_4:61664310-61664329 None:intergenic 25.0%
! GGGAATTTATGCATAATTTA+TGG - chr5_4:61664378-61664397 None:intergenic 25.0%
! TAAAGCAGAGATTATTAAGT+CGG + chr5_4:61664516-61664535 Msa0862090:intron 25.0%
!!! TGTTTTTTATCTTAACTCTC+CGG + chr5_4:61664549-61664568 Msa0862090:intron 25.0%
! AAAATTGATCAAGATCGTTT+CGG + chr5_4:61664607-61664626 Msa0862090:intron 25.0%
!! TTGTTTAAATTTTGTAGGCA+CGG + chr5_4:61664794-61664813 Msa0862090:intron 25.0%
! CAAAGAATGACACAAAAATT+TGG - chr5_4:61665060-61665079 None:intergenic 25.0%
!!! CAAATTTTTGTGTCATTCTT+TGG + chr5_4:61665058-61665077 Msa0862090:CDS 25.0%
! TCTTTGGATTATATCATTTC+TGG + chr5_4:61665074-61665093 Msa0862090:CDS 25.0%
! CTTTTTGTTGAATGTTGTGT+GGG - chr5_4:61661533-61661552 None:intergenic 30.0%
! ACTTTTTGTTGAATGTTGTG+TGG - chr5_4:61661534-61661553 None:intergenic 30.0%
! ATGAGTTACAAAGTTGTTTC+TGG + chr5_4:61661729-61661748 Msa0862090:intron 30.0%
AATGTGAGATACAACTTACA+AGG - chr5_4:61661779-61661798 None:intergenic 30.0%
! TACAAGATGCTTTTCCTTAT+AGG + chr5_4:61661900-61661919 Msa0862090:intron 30.0%
!!! TTGGATGCAATGTACTTTTT+TGG + chr5_4:61661993-61662012 Msa0862090:intron 30.0%
CAGTTTCTTGAAAACATACA+AGG + chr5_4:61662244-61662263 Msa0862090:CDS 30.0%
TGCTTTGACTGTTACATATA+GGG + chr5_4:61662274-61662293 Msa0862090:CDS 30.0%
GATTAATTACGTTTAGCTGT+TGG + chr5_4:61662704-61662723 Msa0862090:intron 30.0%
ATTTGAACACTTGAAAATCG+TGG - chr5_4:61662797-61662816 None:intergenic 30.0%
AAATGCACACTTCAAAATTG+TGG + chr5_4:61662902-61662921 Msa0862090:intron 30.0%
!! GTTGATGATGTTCAAAATCA+TGG + chr5_4:61662924-61662943 Msa0862090:intron 30.0%
GGTTAATTGTGATCAATGAA+TGG + chr5_4:61662945-61662964 Msa0862090:intron 30.0%
ATATTGATATGAGCCTTAAG+TGG - chr5_4:61663162-61663181 None:intergenic 30.0%
! TTTCAAATTCAGGTTCAAGT+AGG + chr5_4:61663241-61663260 Msa0862090:CDS 30.0%
CAAAATTTCTACTGTCCAAA+AGG + chr5_4:61663335-61663354 Msa0862090:CDS 30.0%
TTGGAATTAGGATTCAGAAA+TGG - chr5_4:61663408-61663427 None:intergenic 30.0%
! AATTGGTTTACAAGTTGCAT+TGG + chr5_4:61663542-61663561 Msa0862090:CDS 30.0%
GCAAGATCATGAATAGAATT+TGG - chr5_4:61663633-61663652 None:intergenic 30.0%
!! TATCAAAGTAATTTTGGGGA+TGG + chr5_4:61664046-61664065 Msa0862090:intron 30.0%
!! ATCAAAGTAATTTTGGGGAT+GGG + chr5_4:61664047-61664066 Msa0862090:intron 30.0%
GGAAAATAAGCTTCCATATA+TGG + chr5_4:61664068-61664087 Msa0862090:intron 30.0%
GGACAATAAAAATATGAGCT+AGG + chr5_4:61664089-61664108 Msa0862090:intron 30.0%
ATAGATACAAAGCCTTTGAT+TGG + chr5_4:61664141-61664160 Msa0862090:intron 30.0%
TAACAAGACATGTGATTGTT+TGG + chr5_4:61664164-61664183 Msa0862090:intron 30.0%
GTATCTTTCAATAGACTTTG+TGG + chr5_4:61664229-61664248 Msa0862090:intron 30.0%
AAGTGGAAAAAGAAAGGAAA+AGG - chr5_4:61664304-61664323 None:intergenic 30.0%
AGACATTTGTGACAAAAAAG+TGG - chr5_4:61664321-61664340 None:intergenic 30.0%
!!! CTTTTTTGTCACAAATGTCT+TGG + chr5_4:61664321-61664340 Msa0862090:intron 30.0%
AAAGCAGAGATTATTAAGTC+GGG + chr5_4:61664517-61664536 Msa0862090:intron 30.0%
GAATTTCGGTTAATCAAAAC+CGG - chr5_4:61664571-61664590 None:intergenic 30.0%
!! TTTACTTTTCGGCTGAATTT+CGG - chr5_4:61664585-61664604 None:intergenic 30.0%
! TGTTTAAATTTTGTAGGCAC+GGG + chr5_4:61664795-61664814 Msa0862090:intron 30.0%
AAAGCTATTAAATGTGACAG+GGG - chr5_4:61665037-61665056 None:intergenic 30.0%
GAAAGCTATTAAATGTGACA+GGG - chr5_4:61665038-61665057 None:intergenic 30.0%
!!! TGCTGATTTAACGCATTTTT+AGG + chr5_4:61665160-61665179 Msa0862090:exon 30.0%
!! GCTGATTTAACGCATTTTTA+GGG + chr5_4:61665161-61665180 Msa0862090:exon 30.0%
! AGCAAAGGATTTGAGTTAGT+AGG - chr5_4:61661645-61661664 None:intergenic 35.0%
GAAAAAAATCACCTGAGCAA+AGG - chr5_4:61661660-61661679 None:intergenic 35.0%
! TCATATCAGAACAGTACTGA+AGG - chr5_4:61661713-61661732 None:intergenic 35.0%
!! TGTTTTCAAGAAACTGCATG+TGG - chr5_4:61662240-61662259 None:intergenic 35.0%
TATGTAACAGTCAAAGCAGT+TGG - chr5_4:61662272-61662291 None:intergenic 35.0%
CTGCTTTGACTGTTACATAT+AGG + chr5_4:61662273-61662292 Msa0862090:CDS 35.0%
GCTTTGACTGTTACATATAG+GGG + chr5_4:61662275-61662294 Msa0862090:CDS 35.0%
ATTGGACAATAGAGACATGT+GGG - chr5_4:61662318-61662337 None:intergenic 35.0%
ACACATCACACACATATCAA+CGG + chr5_4:61662454-61662473 Msa0862090:intron 35.0%
!! TTCTCCAACTTTTCTAGTAG+TGG + chr5_4:61662592-61662611 Msa0862090:intron 35.0%
CTATCCACTACTAGAAAAGT+TGG - chr5_4:61662599-61662618 None:intergenic 35.0%
!!! CAACTTTTCTAGTAGTGGAT+AGG + chr5_4:61662597-61662616 Msa0862090:intron 35.0%
TCAAAATCGTGTACATGAGA+TGG - chr5_4:61662764-61662783 None:intergenic 35.0%
!! TTTGAGTTGAGTTTCATGCA+AGG + chr5_4:61663090-61663109 Msa0862090:intron 35.0%
! TTGGAGTGGTAATATCCTTT+TGG - chr5_4:61663353-61663372 None:intergenic 35.0%
TGGAATGATAGTAATTGGAG+TGG - chr5_4:61663367-61663386 None:intergenic 35.0%
TTAGGATTCAGAAATGGATC+AGG - chr5_4:61663402-61663421 None:intergenic 35.0%
!! GTATATGGAAGTGTTGAAGT+TGG - chr5_4:61663447-61663466 None:intergenic 35.0%
! AACTCTTTTCCAATCTCTTC+AGG + chr5_4:61663483-61663502 Msa0862090:CDS 35.0%
! AAATTGCAGCTATTTGGAAC+AGG - chr5_4:61663690-61663709 None:intergenic 35.0%
! GTTCCAAATAGCTGCAATTT+TGG + chr5_4:61663690-61663709 Msa0862090:CDS 35.0%
ATGATAGGAAAAGCCTTACT+TGG - chr5_4:61663744-61663763 None:intergenic 35.0%
! CATGTCTTGTTACCAATCAA+AGG - chr5_4:61664156-61664175 None:intergenic 35.0%
TCAATAGACTTTGTGGTTTG+AGG + chr5_4:61664236-61664255 Msa0862090:intron 35.0%
! AAAGGCTTGACTTTTGTATC+AGG - chr5_4:61664286-61664305 None:intergenic 35.0%
TTCCCTCTATCACATATTGA+TGG + chr5_4:61664431-61664450 Msa0862090:intron 35.0%
CTCCATCAATATGTGATAGA+GGG - chr5_4:61664436-61664455 None:intergenic 35.0%
CTCTATCACATATTGATGGA+GGG + chr5_4:61664435-61664454 Msa0862090:intron 35.0%
GTTGTTGAGAACTTTGATGA+TGG + chr5_4:61664764-61664783 Msa0862090:intron 35.0%
CATGTCAATATCCATCAACA+AGG + chr5_4:61664820-61664839 Msa0862090:CDS 35.0%
GAAGATATTCACCTTGTTGA+TGG - chr5_4:61664834-61664853 None:intergenic 35.0%
! ATTTTCCTTTGCCACACAAA+TGG + chr5_4:61664880-61664899 Msa0862090:intron 35.0%
TTTCAGAACTTCCATTTGTG+TGG - chr5_4:61664894-61664913 None:intergenic 35.0%
GGAAAGCTATTAAATGTGAC+AGG - chr5_4:61665039-61665058 None:intergenic 35.0%
CTAACTCAAATCCTTTGCTC+AGG + chr5_4:61661646-61661665 Msa0862090:CDS 40.0%
!! ATGTGGAAGTACTGGAGAAA+AGG - chr5_4:61662223-61662242 None:intergenic 40.0%
ACTGTTACATATAGGGGTCT+CGG + chr5_4:61662281-61662300 Msa0862090:CDS 40.0%
TTGGACAATAGAGACATGTG+GGG - chr5_4:61662317-61662336 None:intergenic 40.0%
GATTGGACAATAGAGACATG+TGG - chr5_4:61662319-61662338 None:intergenic 40.0%
!! GTTTTGTGTAGAGCATCTTC+TGG - chr5_4:61662341-61662360 None:intergenic 40.0%
ATACTTCAGTGCCATAGCAA+TGG - chr5_4:61662509-61662528 None:intergenic 40.0%
! GTATTTTCCTGAGAGTAGTG+AGG + chr5_4:61662525-61662544 Msa0862090:intron 40.0%
AGGTTCAAGTAGGACAGAAA+AGG + chr5_4:61663251-61663270 Msa0862090:CDS 40.0%
! GGATCAGGTGTTGTAATTGT+TGG - chr5_4:61663387-61663406 None:intergenic 40.0%
! ACTGTGTCTGGATTGGAATT+AGG - chr5_4:61663420-61663439 None:intergenic 40.0%
!! ACTGTGGTTGGATTGGTATA+TGG - chr5_4:61663462-61663481 None:intergenic 40.0%
GATTGGAAAAGAGTTCACTG+TGG - chr5_4:61663478-61663497 None:intergenic 40.0%
CAACTTGAACCTGAAGAGAT+TGG - chr5_4:61663495-61663514 None:intergenic 40.0%
! CAATCTCTTCAGGTTCAAGT+TGG + chr5_4:61663493-61663512 Msa0862090:CDS 40.0%
TTGGACTATGCTTGTGGATA+TGG + chr5_4:61663561-61663580 Msa0862090:CDS 40.0%
GATTGTTCAGCAATTCAACC+AGG + chr5_4:61663591-61663610 Msa0862090:CDS 40.0%
CCACCAAAATTGCAGCTATT+TGG - chr5_4:61663696-61663715 None:intergenic 40.0%
! CCAAATAGCTGCAATTTTGG+TGG + chr5_4:61663693-61663712 Msa0862090:CDS 40.0%
CACTAGCACTAATCCAAGTA+AGG + chr5_4:61663728-61663747 Msa0862090:intron 40.0%
ACTTTGTGGTTTGAGGATGT+AGG + chr5_4:61664243-61664262 Msa0862090:intron 40.0%
CCTCCATCAATATGTGATAG+AGG - chr5_4:61664437-61664456 None:intergenic 40.0%
CCTCTATCACATATTGATGG+AGG + chr5_4:61664434-61664453 Msa0862090:intron 40.0%
GGAGGGAGTAATATAATCCT+TGG + chr5_4:61664452-61664471 Msa0862090:intron 40.0%
TGATCAAGATCGTTTCGGTT+AGG + chr5_4:61664612-61664631 Msa0862090:intron 40.0%
GATCGTTTCGGTTAGGATTA+AGG + chr5_4:61664619-61664638 Msa0862090:intron 40.0%
AACTTCCATTTGTGTGGCAA+AGG - chr5_4:61664888-61664907 None:intergenic 40.0%
TTGAACACGACAAACTCAAG+TGG + chr5_4:61664958-61664977 Msa0862090:CDS 40.0%
!! GGAAGTACTGGAGAAAAGGT+TGG - chr5_4:61662219-61662238 None:intergenic 45.0%
! GAAACTGCATGTGGAAGTAC+TGG - chr5_4:61662231-61662250 None:intergenic 45.0%
! GTGTAGAGCATCTTCTGGAT+TGG - chr5_4:61662336-61662355 None:intergenic 45.0%
AGAGATTAGGGACTCCACTT+TGG + chr5_4:61662381-61662400 Msa0862090:intron 45.0%
!! CTCCACTTTGGTGCCATTAA+TGG + chr5_4:61662393-61662412 Msa0862090:intron 45.0%
TGCCATTAATGGCACCAAAG+TGG - chr5_4:61662398-61662417 None:intergenic 45.0%
!! GGTGCCATTAATGGCATCAA+TGG + chr5_4:61662402-61662421 Msa0862090:intron 45.0%
!! GGTGCCATTGATGCCATTAA+TGG - chr5_4:61662409-61662428 None:intergenic 45.0%
ATGTGTGTGATGTGTGTGTG+TGG - chr5_4:61662449-61662468 None:intergenic 45.0%
TCACACACATATCAACGGTC+AGG + chr5_4:61662459-61662478 Msa0862090:intron 45.0%
CACATATCAACGGTCAGGAT+TGG + chr5_4:61662464-61662483 Msa0862090:intron 45.0%
!! AACGGTCAGGATTGGTTCTA+TGG + chr5_4:61662472-61662491 Msa0862090:intron 45.0%
CACCAATGACACCATTGCTA+TGG + chr5_4:61662495-61662514 Msa0862090:intron 45.0%
!! TGCCATAGCAATGGTGTCAT+TGG - chr5_4:61662500-61662519 None:intergenic 45.0%
TGGAGAAACTGTGTCTGGAT+TGG - chr5_4:61663427-61663446 None:intergenic 45.0%
GAAGTTGGAGAAACTGTGTC+TGG - chr5_4:61663432-61663451 None:intergenic 45.0%
AGAGTTCACTGTGGTTGGAT+TGG - chr5_4:61663469-61663488 None:intergenic 45.0%
GGAAAAGAGTTCACTGTGGT+TGG - chr5_4:61663474-61663493 None:intergenic 45.0%
AAACCAATTTGCGACGCACT+TGG - chr5_4:61663531-61663550 None:intergenic 45.0%
GTTGCATTGGACTATGCTTG+TGG + chr5_4:61663555-61663574 Msa0862090:CDS 45.0%
GACTATGCTTGTGGATATGG+TGG + chr5_4:61663564-61663583 Msa0862090:CDS 45.0%
TGTTCAGCAATTCAACCAGG+TGG + chr5_4:61663594-61663613 Msa0862090:CDS 45.0%
GTGGTGCAGAAGAAAGTTGG+AGG - chr5_4:61661430-61661449 None:intergenic 50.0%
! GTGGTGGTGCAGAAGAAAGT+TGG - chr5_4:61661433-61661452 None:intergenic 50.0%
ATATAGGGGTCTCGGTACAG+AGG + chr5_4:61662289-61662308 Msa0862090:CDS 50.0%
! GTGGTGGAGATGCAATGGTT+TGG - chr5_4:61662430-61662449 None:intergenic 50.0%
! TGTGTGTGGTGGAGATGCAA+TGG - chr5_4:61662435-61662454 None:intergenic 50.0%
TGTGTGATGTGTGTGTGTGG+TGG - chr5_4:61662446-61662465 None:intergenic 50.0%
CTTTGGACCTCACTACTCTC+AGG - chr5_4:61662535-61662554 None:intergenic 50.0%
CTGAGAGTAGTGAGGTCCAA+AGG + chr5_4:61662533-61662552 Msa0862090:intron 50.0%
AGTCCAAGTGCGTCGCAAAT+TGG + chr5_4:61663525-61663544 Msa0862090:CDS 50.0%
GGATTGTAACAGCTTCCACC+TGG - chr5_4:61663612-61663631 None:intergenic 50.0%
! TCAAGTGGTGCCAACGTCTT+TGG + chr5_4:61664973-61664992 Msa0862090:CDS 50.0%
! TGGCACTGAACCAAAGACGT+TGG - chr5_4:61664986-61665005 None:intergenic 50.0%
!! GCAGAAGGAGATGGATTGGT+GGG - chr5_4:61665012-61665031 None:intergenic 50.0%
!! AGCAGAAGGAGATGGATTGG+TGG - chr5_4:61665013-61665032 None:intergenic 50.0%
GATAGGCAAAGGTGAGGTGG+TGG - chr5_4:61661449-61661468 None:intergenic 55.0%
CCTGATAGGCAAAGGTGAGG+TGG - chr5_4:61661452-61661471 None:intergenic 55.0%
CCACCTCACCTTTGCCTATC+AGG + chr5_4:61661449-61661468 Msa0862090:five_prime_UTR 55.0%
TGTGTGGGCCTGATAGGCAA+AGG - chr5_4:61661460-61661479 None:intergenic 55.0%
AGAGTGTGTGTGGGCCTGAT+AGG - chr5_4:61661466-61661485 None:intergenic 55.0%
! GGTGGTGGTAGAGTGTGTGT+GGG - chr5_4:61661475-61661494 None:intergenic 55.0%
!! TGGTGGTGGTAGAGTGTGTG+TGG - chr5_4:61661476-61661495 None:intergenic 55.0%
GGCAGCAGAAGGAGATGGAT+TGG - chr5_4:61665016-61665035 None:intergenic 55.0%
AATGTGACAGGGGCAGCAGA+AGG - chr5_4:61665027-61665046 None:intergenic 55.0%
GGGCCTGATAGGCAAAGGTG+AGG - chr5_4:61661455-61661474 None:intergenic 60.0%
!! GGAGATGGATTGGTGGGCAC+TGG - chr5_4:61665006-61665025 None:intergenic 60.0%
ACAGGGGCAGCAGAAGGAGA+TGG - chr5_4:61665021-61665040 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 61661427 61665192 61661427 ID=Msa0862090;Name=Msa0862090
chr5_4 mRNA 61661427 61665192 61661427 ID=Msa0862090-mRNA-1;Parent=Msa0862090;Name=Msa0862090-mRNA-1;_AED=0.11;_eAED=0.11;_QI=180|0.5|0.6|0.8|0.5|0.6|5|22|318
chr5_4 exon 61661427 61661667 61661427 ID=Msa0862090-mRNA-1:exon:19113;Parent=Msa0862090-mRNA-1
chr5_4 exon 61662210 61662310 61662210 ID=Msa0862090-mRNA-1:exon:19114;Parent=Msa0862090-mRNA-1
chr5_4 exon 61663210 61663744 61663210 ID=Msa0862090-mRNA-1:exon:19115;Parent=Msa0862090-mRNA-1
chr5_4 exon 61664811 61664841 61664811 ID=Msa0862090-mRNA-1:exon:19116;Parent=Msa0862090-mRNA-1
chr5_4 exon 61664942 61665192 61664942 ID=Msa0862090-mRNA-1:exon:19117;Parent=Msa0862090-mRNA-1
chr5_4 five_prime_UTR 61661427 61661606 61661427 ID=Msa0862090-mRNA-1:five_prime_utr;Parent=Msa0862090-mRNA-1
chr5_4 CDS 61661607 61661667 61661607 ID=Msa0862090-mRNA-1:cds;Parent=Msa0862090-mRNA-1
chr5_4 CDS 61662210 61662310 61662210 ID=Msa0862090-mRNA-1:cds;Parent=Msa0862090-mRNA-1
chr5_4 CDS 61663210 61663744 61663210 ID=Msa0862090-mRNA-1:cds;Parent=Msa0862090-mRNA-1
chr5_4 CDS 61664811 61664841 61664811 ID=Msa0862090-mRNA-1:cds;Parent=Msa0862090-mRNA-1
chr5_4 CDS 61664942 61665170 61664942 ID=Msa0862090-mRNA-1:cds;Parent=Msa0862090-mRNA-1
chr5_4 three_prime_UTR 61665171 61665192 61665171 ID=Msa0862090-mRNA-1:three_prime_utr;Parent=Msa0862090-mRNA-1
Gene Sequence

>Msa0862090

ATGAAAAGGAGTGTATATCACTATGCAATTTTTCTCCTACTAACTCAAATCCTTTGCTCAGTTGAATCCAACCTTTTCTCCAGTACTTCCACATGCAGTTTCTTGAAAACATACAAGGGTCCAACTGCTTTGACTGTTACATATAGGGGTCTCGGTACAGAGAATCAGAACAGACAAAGTAATTCAATTATGTTTTCAAATTCAGGTTCAAGTAGGACAGAAAAGGAAGCACAAAGACATGTTAATGTACTACAAAGACATGAAGTGAAACAAGAATTTATCACTGACAAAATTTCTACTGTCCAAAAGGATATTACCACTCCAATTACTATCATTCCAACAATTACAACACCTGATCCATTTCTGAATCCTAATTCCAATCCAGACACAGTTTCTCCAACTTCAACACTTCCATATACCAATCCAACCACAGTGAACTCTTTTCCAATCTCTTCAGGTTCAAGTTGGTGTGTTGCAAGTCCAAGTGCGTCGCAAATTGGTTTACAAGTTGCATTGGACTATGCTTGTGGATATGGTGGCACTGATTGTTCAGCAATTCAACCAGGTGGAAGCTGTTACAATCCAAATTCTATTCATGATCTTGCTTCTTATGCCTTTAATAAGTATTATCATAAGAATCCTGTTCCAAATAGCTGCAATTTTGGTGGAACTGCTGTCATCACTAGCACTAATCCAAGCACGGGAACATGTCAATATCCATCAACAAGTACAAGTTCATCAATCTTGAACACGACAAACTCAAGTGGTGCCAACGTCTTTGGTTCAGTGCCAGTGCCCACCAATCCATCTCCTTCTGCTGCCCCTGTCACATTTAATAGCTTTCCAAATTTTTGTGTCATTCTTTGGATTATATCATTTCTGGAAAATAATTTTTCCATAATCATCAATTTTGAAAAATATGGATATGAGATTGAGAGCTACATTTTGCTGATTTAA
Protein sequence

>Msa0862090

MKRSVYHYAIFLLLTQILCSVESNLFSSTSTCSFLKTYKGPTALTVTYRGLGTENQNRQSNSIMFSNSGSSRTEKEAQRHVNVLQRHEVKQEFITDKISTVQKDITTPITIIPTITTPDPFLNPNSNPDTVSPTSTLPYTNPTTVNSFPISSGSSWCVASPSASQIGLQVALDYACGYGGTDCSAIQPGGSCYNPNSIHDLASYAFNKYYHKNPVPNSCNFGGTAVITSTNPSTGTCQYPSTSTSSSILNTTNSSGANVFGSVPVPTNPSPSAAPVTFNSFPNFCVILWIISFLENNFSIIINFEKYGYEIESYILLI*