AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0862210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 107 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAGAAACTTGGAGAATTT+TGG 0.170667 5_4:-61832653 Msa0862210:three_prime_UTR
GCTAGTGAGTAAAGACTTAA+AGG 0.190975 5_4:+61833197 None:intergenic
GTTGCTCGTGTGAAAGATTT+TGG 0.226593 5_4:-61833081 Msa0862210:three_prime_UTR
GACGCTTCCCGCGTTTCTTC+TGG 0.262645 5_4:+61832884 None:intergenic
TCCTAAAGTTGCTTCGAGTT+TGG 0.279185 5_4:-61833331 Msa0862210:three_prime_UTR
TATGCGCACTATATTTGATT+TGG 0.290390 5_4:-61833610 Msa0862210:three_prime_UTR
CCTAAAGTTGCTTCGAGTTT+GGG 0.302689 5_4:-61833330 Msa0862210:three_prime_UTR
CCCAAACTCGAAGCAACTTT+AGG 0.324461 5_4:+61833330 None:intergenic
TATAATAATTCGATATTAAG+AGG 0.324633 5_4:+61834471 None:intergenic
ACAACAGCACTCCATTGATT+AGG 0.327716 5_4:+61833657 None:intergenic
CATTCAGAGGTTACTGTTGA+TGG 0.334111 5_4:-61833132 Msa0862210:three_prime_UTR
GAGTAAACCTTGTGTGATAT+TGG 0.347782 5_4:+61833995 None:intergenic
GCTTCGAGTTTGGGAAATAT+TGG 0.355075 5_4:-61833321 Msa0862210:three_prime_UTR
ATATGAAATTCCAGAGAGTT+AGG 0.359653 5_4:-61833848 Msa0862210:three_prime_UTR
TGGAGACGCGCATTGGCAAC+AGG 0.362282 5_4:+61834067 None:intergenic
TGATCTATTGGAGGAGCAGC+TGG 0.364240 5_4:-61832785 Msa0862210:three_prime_UTR
CACTATATTTGATTTGGAAC+AGG 0.370247 5_4:-61833604 Msa0862210:three_prime_UTR
ACTCACTAGCAAAGAGTTAG+TGG 0.372541 5_4:-61833184 Msa0862210:three_prime_UTR
AAATTTGGTGACCATGCTTT+TGG 0.374828 5_4:-61833009 Msa0862210:three_prime_UTR
CAACAGCACTCCATTGATTA+GGG 0.376117 5_4:+61833658 None:intergenic
ATTTAATATCAAGACTCATC+TGG 0.383930 5_4:-61833043 Msa0862210:three_prime_UTR
AGTTTCTATATCAGCTTGTC+AGG 0.408572 5_4:+61832666 None:intergenic
GATTCCTTCTAGATCATTTG+AGG 0.411291 5_4:+61832855 None:intergenic
GTTCAGAAAGAGGTTATGAA+TGG 0.422109 5_4:-61833762 Msa0862210:three_prime_UTR
AAACAGCGTGCCGATGTAAT+CGG 0.426263 5_4:+61833249 None:intergenic
GTCCTATTGTGATTTGTACT+AGG 0.431373 5_4:-61833299 Msa0862210:three_prime_UTR
TCCTATTGTGATTTGTACTA+GGG 0.431610 5_4:-61833298 Msa0862210:three_prime_UTR
TCTTAGTTGGTGATATGTAT+TGG 0.440006 5_4:-61833227 Msa0862210:three_prime_UTR
TGCTCCTCCAATAGATCATA+AGG 0.440638 5_4:+61832790 None:intergenic
AAGATGATCGGCTTATCATT+AGG 0.441042 5_4:-61832826 Msa0862210:three_prime_UTR
TCGTCCTCAAATGATCTAGA+AGG 0.441149 5_4:-61832859 Msa0862210:three_prime_UTR
AGAGCTGCCTTATGATCTAT+TGG 0.442581 5_4:-61832797 Msa0862210:three_prime_UTR
ATCAAATCCCCACGACAAAC+AGG 0.446099 5_4:+61833363 None:intergenic
TTGCTTATTGCGGCGCCGTA+AGG 0.457438 5_4:+61834330 None:intergenic
TCGAGTCGGGTTCAGTTGGA+AGG 0.458339 5_4:+61833808 None:intergenic
TCGGCACGCTGTTTCTTAGT+TGG 0.464891 5_4:-61833240 Msa0862210:three_prime_UTR
TGGTGATAGTGAGATTGAAT+TGG 0.470003 5_4:-61832962 Msa0862210:three_prime_UTR
CTAGTGAGTAAAGACTTAAA+GGG 0.474026 5_4:+61833198 None:intergenic
TTGTAAATAGCATTCGCATT+CGG 0.479845 5_4:+61833947 None:intergenic
CGCGCATTGGCAACAGGGAA+TGG 0.483285 5_4:+61834073 None:intergenic
GACTTGTGTGGGGTGAATAG+TGG 0.483488 5_4:-61832982 Msa0862210:three_prime_UTR
CATGTACTAACCTAACTCTC+TGG 0.498661 5_4:+61833838 None:intergenic
TTTAATATCAAGACTCATCT+GGG 0.499567 5_4:-61833042 Msa0862210:three_prime_UTR
ACCCTAGTACAAATCACAAT+AGG 0.501185 5_4:+61833297 None:intergenic
AAATTTGTCCTGTTTGTCGT+GGG 0.512966 5_4:-61833371 Msa0862210:three_prime_UTR
CGAGTCGGGTTCAGTTGGAA+GGG 0.523460 5_4:+61833809 None:intergenic
ATTGAATTGGAGGAGTACAT+AGG 0.524126 5_4:-61832949 Msa0862210:three_prime_UTR
GTATTTGTCAAAATTGTACT+CGG 0.533454 5_4:-61833692 Msa0862210:three_prime_UTR
TGATAGTGAGATTGAATTGG+AGG 0.536096 5_4:-61832959 Msa0862210:three_prime_UTR
ACATTTGACACACATGTTAG+CGG 0.536562 5_4:+61834031 None:intergenic
TATTAGTTTGATCCAAGTAG+TGG 0.540633 5_4:+61833920 None:intergenic
GACAAGCTGATATAGAAACT+TGG 0.543983 5_4:-61832663 Msa0862210:three_prime_UTR
ACAACCACCTCCTCCTTCAC+AGG 0.545135 5_4:-61834298 Msa0862210:intron
TGTGAGGATTTGTGATGGTA+AGG 0.546264 5_4:-61833454 Msa0862210:three_prime_UTR
GTTCGGTTTGGCTAATGTTG+AGG 0.547278 5_4:-61833103 Msa0862210:three_prime_UTR
TGTTGCCACTCCATTGCAGA+GGG 0.547819 5_4:+61834356 None:intergenic
AATGTCAAGATGCATACCAT+TGG 0.548934 5_4:-61834123 Msa0862210:CDS
GTTCGAGTGGAGACGCGCAT+TGG 0.549381 5_4:+61834060 None:intergenic
ATTAGTTTGATCCAAGTAGT+GGG 0.552372 5_4:+61833921 None:intergenic
GAAATTTGTCCTGTTTGTCG+TGG 0.553561 5_4:-61833372 Msa0862210:three_prime_UTR
TGAATGCTAACCCTAATCAA+TGG 0.555269 5_4:-61833668 Msa0862210:three_prime_UTR
GGAATCTATGATAAGATGAT+CGG 0.567757 5_4:-61832838 Msa0862210:three_prime_UTR
TTAGCGGTGTTTAGTTCGAG+TGG 0.569875 5_4:+61834047 None:intergenic
GTGTTGCCACTCCATTGCAG+AGG 0.575146 5_4:+61834355 None:intergenic
AGAAACGCCAGAAGAAACGC+GGG 0.576178 5_4:-61832891 Msa0862210:three_prime_UTR
TAGTTTGATCCAAGTAGTGG+GGG 0.576339 5_4:+61833923 None:intergenic
TAGTTGGTGATATGTATTGG+AGG 0.578584 5_4:-61833224 Msa0862210:three_prime_UTR
GCTGCCTTATGATCTATTGG+AGG 0.582774 5_4:-61832794 Msa0862210:three_prime_UTR
ATGATAACCCTAACCTGTGA+AGG 0.584574 5_4:+61834285 None:intergenic
GCATCAGAAACCCTCTGCAA+TGG 0.586753 5_4:-61834366 Msa0862210:CDS
GGTTATGAATGGAACAGTAG+TGG 0.587627 5_4:-61833751 Msa0862210:three_prime_UTR
TATTTGTCAAAATTGTACTC+GGG 0.589875 5_4:-61833691 Msa0862210:three_prime_UTR
TTGGAGGAGTACATAGGAGG+TGG 0.593850 5_4:-61832943 Msa0862210:three_prime_UTR
TCGTTGCGAGTTGCTTATTG+CGG 0.596684 5_4:+61834320 None:intergenic
ATTGCAGAGGGTTTCTGATG+CGG 0.597516 5_4:+61834368 None:intergenic
ACAGGGAATGGTGTGGAATG+TGG 0.599860 5_4:+61834085 None:intergenic
CTAACCTGTGAAGGAGGAGG+TGG 0.600100 5_4:+61834294 None:intergenic
TGTCGAGGAGGTTCATTCAG+AGG 0.600213 5_4:-61833145 Msa0862210:three_prime_UTR
AGTTGGTGATATGTATTGGA+GGG 0.602581 5_4:-61833223 Msa0862210:three_prime_UTR
AAACTCGAAGCAACTTTAGG+AGG 0.606354 5_4:+61833333 None:intergenic
CGAAGAGTAAGAAAGTGAGG+AGG 0.607260 5_4:-61832723 Msa0862210:three_prime_UTR
GAATTGGAGGAGTACATAGG+AGG 0.608809 5_4:-61832946 Msa0862210:three_prime_UTR
TTACCATCACAAATCCTCAC+AGG 0.611825 5_4:+61833456 None:intergenic
ACCCTAACCTGTGAAGGAGG+AGG 0.611880 5_4:+61834291 None:intergenic
ATCAAACAAAGCAATCGTGT+TGG 0.612522 5_4:+61833272 None:intergenic
AGGCGAAGAGTAAGAAAGTG+AGG 0.612790 5_4:-61832726 Msa0862210:three_prime_UTR
GATCTATTGGAGGAGCAGCT+GGG 0.615705 5_4:-61832784 Msa0862210:three_prime_UTR
GGTAAGGAGCTTGTTTCTCG+TGG 0.619320 5_4:-61833438 Msa0862210:three_prime_UTR
TTTGTTTGATCCGATTACAT+CGG 0.620703 5_4:-61833259 Msa0862210:three_prime_UTR
ATAACCCTAACCTGTGAAGG+AGG 0.627381 5_4:+61834288 None:intergenic
TCTGAATGATGAGGAATCTG+AGG 0.627809 5_4:-61832746 Msa0862210:three_prime_UTR
TTAGTTTGATCCAAGTAGTG+GGG 0.628627 5_4:+61833922 None:intergenic
ATATGCTGTGCTTGATGTCG+AGG 0.630950 5_4:-61833160 Msa0862210:three_prime_UTR
AAGTCTTCATCTGAATGATG+AGG 0.634247 5_4:-61832755 Msa0862210:three_prime_UTR
GAGAAACGCCAGAAGAAACG+CGG 0.636478 5_4:-61832892 Msa0862210:three_prime_UTR
GGAGACGCGCATTGGCAACA+GGG 0.637001 5_4:+61834068 None:intergenic
ACAAGTCATAACCAAAAGCA+TGG 0.643564 5_4:+61832998 None:intergenic
AGTTTGATCCAAGTAGTGGG+GGG 0.647450 5_4:+61833924 None:intergenic
AGAAACCCTCTGCAATGGAG+TGG 0.649231 5_4:-61834361 Msa0862210:CDS
CTATTGGAGGAGCAGCTGGG+TGG 0.657467 5_4:-61832781 Msa0862210:three_prime_UTR
GGAGTGGCAACACCACCTTA+CGG 0.660886 5_4:-61834345 Msa0862210:CDS
ATGATCGGCTTATCATTAGG+TGG 0.673199 5_4:-61832823 Msa0862210:three_prime_UTR
TGCTGTGCTTGATGTCGAGG+AGG 0.696765 5_4:-61833157 Msa0862210:three_prime_UTR
TAAAGGCACAGGTTCCTGTG+AGG 0.699737 5_4:-61833470 Msa0862210:three_prime_UTR
ATTGGCAACAGGGAATGGTG+TGG 0.703792 5_4:+61834078 None:intergenic
GTTCCTGTGAGGATTTGTGA+TGG 0.713156 5_4:-61833459 Msa0862210:three_prime_UTR
AATTTGTCCTGTTTGTCGTG+GGG 0.713440 5_4:-61833370 Msa0862210:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTAATATATTTTAA+AGG - chr5_4:61832671-61832690 Msa0862210:three_prime_UTR 0.0%
!!! TTATTTTTAATATATTTTAA+AGG - chr5_4:61832671-61832690 Msa0862210:three_prime_UTR 0.0%
!! TATAATAATTCGATATTAAG+AGG + chr5_4:61832620-61832639 None:intergenic 15.0%
!! TATAATAATTCGATATTAAG+AGG + chr5_4:61832620-61832639 None:intergenic 15.0%
!! GAAAATTGAATGAATGAAAA+AGG + chr5_4:61832843-61832862 None:intergenic 20.0%
!!! ATCTCAATTTTTCTCTTTTT+CGG - chr5_4:61832865-61832884 Msa0862210:three_prime_UTR 20.0%
!! GAAAATTGAATGAATGAAAA+AGG + chr5_4:61832843-61832862 None:intergenic 20.0%
!!! ATCTCAATTTTTCTCTTTTT+CGG - chr5_4:61832865-61832884 Msa0862210:three_prime_UTR 20.0%
! GTATTTGTCAAAATTGTACT+CGG - chr5_4:61833396-61833415 Msa0862210:three_prime_UTR 25.0%
! TATTTGTCAAAATTGTACTC+GGG - chr5_4:61833397-61833416 Msa0862210:three_prime_UTR 25.0%
! AGAATCAAAAAGATGAAACA+AGG - chr5_4:61833542-61833561 Msa0862210:three_prime_UTR 25.0%
!!! GAAGTTTGTTGATTTTGTAA+AGG - chr5_4:61833601-61833620 Msa0862210:three_prime_UTR 25.0%
! ATTTAATATCAAGACTCATC+TGG - chr5_4:61834045-61834064 Msa0862210:exon 25.0%
! TTTAATATCAAGACTCATCT+GGG - chr5_4:61834046-61834065 Msa0862210:exon 25.0%
!!! GTGCAATTTTAATAAAGAAG+AGG - chr5_4:61834167-61834186 Msa0862210:intron 25.0%
!! TATAGAAACTTGGAGAATTT+TGG - chr5_4:61834435-61834454 Msa0862210:five_prime_UTR 25.0%
!!! TTTTGGTTTTGTTTATGTCT+AGG - chr5_4:61834452-61834471 Msa0862210:five_prime_UTR 25.0%
!!! GCTGTCTTTTATTTTTGTTT+AGG - chr5_4:61834474-61834493 Msa0862210:five_prime_UTR 25.0%
! GTATTTGTCAAAATTGTACT+CGG - chr5_4:61833396-61833415 Msa0862210:three_prime_UTR 25.0%
! TATTTGTCAAAATTGTACTC+GGG - chr5_4:61833397-61833416 Msa0862210:three_prime_UTR 25.0%
! AGAATCAAAAAGATGAAACA+AGG - chr5_4:61833542-61833561 Msa0862210:three_prime_UTR 25.0%
!!! GAAGTTTGTTGATTTTGTAA+AGG - chr5_4:61833601-61833620 Msa0862210:three_prime_UTR 25.0%
! ATTTAATATCAAGACTCATC+TGG - chr5_4:61834045-61834064 Msa0862210:exon 25.0%
! TTTAATATCAAGACTCATCT+GGG - chr5_4:61834046-61834065 Msa0862210:exon 25.0%
!!! GTGCAATTTTAATAAAGAAG+AGG - chr5_4:61834167-61834186 Msa0862210:intron 25.0%
!! TATAGAAACTTGGAGAATTT+TGG - chr5_4:61834435-61834454 Msa0862210:five_prime_UTR 25.0%
!!! TTTTGGTTTTGTTTATGTCT+AGG - chr5_4:61834452-61834471 Msa0862210:five_prime_UTR 25.0%
!!! GCTGTCTTTTATTTTTGTTT+AGG - chr5_4:61834474-61834493 Msa0862210:five_prime_UTR 25.0%
TACACTTTCGATTTCAAACA+GGG - chr5_4:61832913-61832932 Msa0862210:three_prime_UTR 30.0%
TCAAAAACCAATATCACACA+AGG - chr5_4:61833086-61833105 Msa0862210:three_prime_UTR 30.0%
TTGTAAATAGCATTCGCATT+CGG + chr5_4:61833144-61833163 None:intergenic 30.0%
! ATTAGTTTGATCCAAGTAGT+GGG + chr5_4:61833170-61833189 None:intergenic 30.0%
! TATTAGTTTGATCCAAGTAG+TGG + chr5_4:61833171-61833190 None:intergenic 30.0%
ATATGAAATTCCAGAGAGTT+AGG - chr5_4:61833240-61833259 Msa0862210:three_prime_UTR 30.0%
! CTGAACAAAAACCTTGATTT+TGG + chr5_4:61833312-61833331 None:intergenic 30.0%
TATGCGCACTATATTTGATT+TGG - chr5_4:61833478-61833497 Msa0862210:three_prime_UTR 30.0%
!! CACTATATTTGATTTGGAAC+AGG - chr5_4:61833484-61833503 Msa0862210:three_prime_UTR 30.0%
! TCCTATTGTGATTTGTACTA+GGG - chr5_4:61833790-61833809 Msa0862210:three_prime_UTR 30.0%
TTTGTTTGATCCGATTACAT+CGG - chr5_4:61833829-61833848 Msa0862210:three_prime_UTR 30.0%
!! TCTTAGTTGGTGATATGTAT+TGG - chr5_4:61833861-61833880 Msa0862210:three_prime_UTR 30.0%
CTAGTGAGTAAAGACTTAAA+GGG + chr5_4:61833893-61833912 None:intergenic 30.0%
!!! CTGGGTTATCTTTTGAAATT+TGG - chr5_4:61834064-61834083 Msa0862210:CDS 30.0%
GGAATCTATGATAAGATGAT+CGG - chr5_4:61834250-61834269 Msa0862210:intron 30.0%
TACACTTTCGATTTCAAACA+GGG - chr5_4:61832913-61832932 Msa0862210:three_prime_UTR 30.0%
TCAAAAACCAATATCACACA+AGG - chr5_4:61833086-61833105 Msa0862210:three_prime_UTR 30.0%
TTGTAAATAGCATTCGCATT+CGG + chr5_4:61833144-61833163 None:intergenic 30.0%
! ATTAGTTTGATCCAAGTAGT+GGG + chr5_4:61833170-61833189 None:intergenic 30.0%
! TATTAGTTTGATCCAAGTAG+TGG + chr5_4:61833171-61833190 None:intergenic 30.0%
ATATGAAATTCCAGAGAGTT+AGG - chr5_4:61833240-61833259 Msa0862210:three_prime_UTR 30.0%
! CTGAACAAAAACCTTGATTT+TGG + chr5_4:61833312-61833331 None:intergenic 30.0%
TATGCGCACTATATTTGATT+TGG - chr5_4:61833478-61833497 Msa0862210:three_prime_UTR 30.0%
!! CACTATATTTGATTTGGAAC+AGG - chr5_4:61833484-61833503 Msa0862210:three_prime_UTR 30.0%
! TCCTATTGTGATTTGTACTA+GGG - chr5_4:61833790-61833809 Msa0862210:three_prime_UTR 30.0%
TTTGTTTGATCCGATTACAT+CGG - chr5_4:61833829-61833848 Msa0862210:three_prime_UTR 30.0%
!! TCTTAGTTGGTGATATGTAT+TGG - chr5_4:61833861-61833880 Msa0862210:three_prime_UTR 30.0%
CTAGTGAGTAAAGACTTAAA+GGG + chr5_4:61833893-61833912 None:intergenic 30.0%
!!! CTGGGTTATCTTTTGAAATT+TGG - chr5_4:61834064-61834083 Msa0862210:CDS 30.0%
GGAATCTATGATAAGATGAT+CGG - chr5_4:61834250-61834269 Msa0862210:intron 30.0%
CTACACTTTCGATTTCAAAC+AGG - chr5_4:61832912-61832931 Msa0862210:three_prime_UTR 35.0%
ACACTTTCGATTTCAAACAG+GGG - chr5_4:61832914-61832933 Msa0862210:three_prime_UTR 35.0%
AATGTCAAGATGCATACCAT+TGG - chr5_4:61832965-61832984 Msa0862210:three_prime_UTR 35.0%
! GCAAGATTTTGTTGATCCAA+TGG + chr5_4:61832984-61833003 None:intergenic 35.0%
ACATTTGACACACATGTTAG+CGG + chr5_4:61833060-61833079 None:intergenic 35.0%
GAGTAAACCTTGTGTGATAT+TGG + chr5_4:61833096-61833115 None:intergenic 35.0%
! TTAGTTTGATCCAAGTAGTG+GGG + chr5_4:61833169-61833188 None:intergenic 35.0%
!!! GCAAGAAACTGTTTTGATTG+TGG + chr5_4:61833194-61833213 None:intergenic 35.0%
!!! ATTTTGGTCTTTTTCGAGTC+GGG + chr5_4:61833296-61833315 None:intergenic 35.0%
!!! GATTTTGGTCTTTTTCGAGT+CGG + chr5_4:61833297-61833316 None:intergenic 35.0%
CTCGAAAAAGACCAAAATCA+AGG - chr5_4:61833298-61833317 Msa0862210:three_prime_UTR 35.0%
! CAAGGTTTTTGTTCAGAAAG+AGG - chr5_4:61833316-61833335 Msa0862210:three_prime_UTR 35.0%
GTTCAGAAAGAGGTTATGAA+TGG - chr5_4:61833326-61833345 Msa0862210:three_prime_UTR 35.0%
TGAATGCTAACCCTAATCAA+TGG - chr5_4:61833420-61833439 Msa0862210:three_prime_UTR 35.0%
!!! GAACAGGCTATTTTGAAACA+TGG - chr5_4:61833500-61833519 Msa0862210:three_prime_UTR 35.0%
!!! GCTATTTTGAAACATGGTGT+TGG - chr5_4:61833506-61833525 Msa0862210:three_prime_UTR 35.0%
!!! TTTTGAAACATGGTGTTGGT+AGG - chr5_4:61833510-61833529 Msa0862210:three_prime_UTR 35.0%
!!! TGTTGATTTTGTAAAGGCAC+AGG - chr5_4:61833607-61833626 Msa0862210:three_prime_UTR 35.0%
AAATTTGTCCTGTTTGTCGT+GGG - chr5_4:61833717-61833736 Msa0862210:three_prime_UTR 35.0%
! GTCCTATTGTGATTTGTACT+AGG - chr5_4:61833789-61833808 Msa0862210:three_prime_UTR 35.0%
ACCCTAGTACAAATCACAAT+AGG + chr5_4:61833794-61833813 None:intergenic 35.0%
ATCAAACAAAGCAATCGTGT+TGG + chr5_4:61833819-61833838 None:intergenic 35.0%
!! TAGTTGGTGATATGTATTGG+AGG - chr5_4:61833864-61833883 Msa0862210:three_prime_UTR 35.0%
!! AGTTGGTGATATGTATTGGA+GGG - chr5_4:61833865-61833884 Msa0862210:three_prime_UTR 35.0%
GCTAGTGAGTAAAGACTTAA+AGG + chr5_4:61833894-61833913 None:intergenic 35.0%
!! ACTGTTGATGGCAAAAAGTT+CGG - chr5_4:61833968-61833987 Msa0862210:three_prime_UTR 35.0%
!! AAATTTGGTGACCATGCTTT+TGG - chr5_4:61834079-61834098 Msa0862210:CDS 35.0%
ACAAGTCATAACCAAAAGCA+TGG + chr5_4:61834093-61834112 None:intergenic 35.0%
!! CTTTTGGTTATGACTTGTGT+GGG - chr5_4:61834095-61834114 Msa0862210:CDS 35.0%
!! TTTTGGTTATGACTTGTGTG+GGG - chr5_4:61834096-61834115 Msa0862210:CDS 35.0%
! TGGTGATAGTGAGATTGAAT+TGG - chr5_4:61834126-61834145 Msa0862210:CDS 35.0%
! TGATAGTGAGATTGAATTGG+AGG - chr5_4:61834129-61834148 Msa0862210:CDS 35.0%
! ATTGAATTGGAGGAGTACAT+AGG - chr5_4:61834139-61834158 Msa0862210:CDS 35.0%
GATTCCTTCTAGATCATTTG+AGG + chr5_4:61834236-61834255 None:intergenic 35.0%
! AAGATGATCGGCTTATCATT+AGG - chr5_4:61834262-61834281 Msa0862210:intron 35.0%
AAGTCTTCATCTGAATGATG+AGG - chr5_4:61834333-61834352 Msa0862210:CDS 35.0%
AGTTTCTATATCAGCTTGTC+AGG + chr5_4:61834425-61834444 None:intergenic 35.0%
GACAAGCTGATATAGAAACT+TGG - chr5_4:61834425-61834444 Msa0862210:five_prime_UTR 35.0%
CTACACTTTCGATTTCAAAC+AGG - chr5_4:61832912-61832931 Msa0862210:three_prime_UTR 35.0%
ACACTTTCGATTTCAAACAG+GGG - chr5_4:61832914-61832933 Msa0862210:three_prime_UTR 35.0%
AATGTCAAGATGCATACCAT+TGG - chr5_4:61832965-61832984 Msa0862210:three_prime_UTR 35.0%
! GCAAGATTTTGTTGATCCAA+TGG + chr5_4:61832984-61833003 None:intergenic 35.0%
ACATTTGACACACATGTTAG+CGG + chr5_4:61833060-61833079 None:intergenic 35.0%
GAGTAAACCTTGTGTGATAT+TGG + chr5_4:61833096-61833115 None:intergenic 35.0%
! TTAGTTTGATCCAAGTAGTG+GGG + chr5_4:61833169-61833188 None:intergenic 35.0%
!!! GCAAGAAACTGTTTTGATTG+TGG + chr5_4:61833194-61833213 None:intergenic 35.0%
!!! ATTTTGGTCTTTTTCGAGTC+GGG + chr5_4:61833296-61833315 None:intergenic 35.0%
!!! GATTTTGGTCTTTTTCGAGT+CGG + chr5_4:61833297-61833316 None:intergenic 35.0%
CTCGAAAAAGACCAAAATCA+AGG - chr5_4:61833298-61833317 Msa0862210:three_prime_UTR 35.0%
! CAAGGTTTTTGTTCAGAAAG+AGG - chr5_4:61833316-61833335 Msa0862210:three_prime_UTR 35.0%
GTTCAGAAAGAGGTTATGAA+TGG - chr5_4:61833326-61833345 Msa0862210:three_prime_UTR 35.0%
TGAATGCTAACCCTAATCAA+TGG - chr5_4:61833420-61833439 Msa0862210:three_prime_UTR 35.0%
!!! GAACAGGCTATTTTGAAACA+TGG - chr5_4:61833500-61833519 Msa0862210:three_prime_UTR 35.0%
!!! GCTATTTTGAAACATGGTGT+TGG - chr5_4:61833506-61833525 Msa0862210:three_prime_UTR 35.0%
!!! TTTTGAAACATGGTGTTGGT+AGG - chr5_4:61833510-61833529 Msa0862210:three_prime_UTR 35.0%
!!! TGTTGATTTTGTAAAGGCAC+AGG - chr5_4:61833607-61833626 Msa0862210:three_prime_UTR 35.0%
AAATTTGTCCTGTTTGTCGT+GGG - chr5_4:61833717-61833736 Msa0862210:three_prime_UTR 35.0%
! GTCCTATTGTGATTTGTACT+AGG - chr5_4:61833789-61833808 Msa0862210:three_prime_UTR 35.0%
ACCCTAGTACAAATCACAAT+AGG + chr5_4:61833794-61833813 None:intergenic 35.0%
ATCAAACAAAGCAATCGTGT+TGG + chr5_4:61833819-61833838 None:intergenic 35.0%
!! TAGTTGGTGATATGTATTGG+AGG - chr5_4:61833864-61833883 Msa0862210:three_prime_UTR 35.0%
!! AGTTGGTGATATGTATTGGA+GGG - chr5_4:61833865-61833884 Msa0862210:three_prime_UTR 35.0%
GCTAGTGAGTAAAGACTTAA+AGG + chr5_4:61833894-61833913 None:intergenic 35.0%
!! ACTGTTGATGGCAAAAAGTT+CGG - chr5_4:61833968-61833987 Msa0862210:three_prime_UTR 35.0%
!! AAATTTGGTGACCATGCTTT+TGG - chr5_4:61834079-61834098 Msa0862210:CDS 35.0%
ACAAGTCATAACCAAAAGCA+TGG + chr5_4:61834093-61834112 None:intergenic 35.0%
!! CTTTTGGTTATGACTTGTGT+GGG - chr5_4:61834095-61834114 Msa0862210:CDS 35.0%
!! TTTTGGTTATGACTTGTGTG+GGG - chr5_4:61834096-61834115 Msa0862210:CDS 35.0%
! TGGTGATAGTGAGATTGAAT+TGG - chr5_4:61834126-61834145 Msa0862210:CDS 35.0%
! TGATAGTGAGATTGAATTGG+AGG - chr5_4:61834129-61834148 Msa0862210:CDS 35.0%
! ATTGAATTGGAGGAGTACAT+AGG - chr5_4:61834139-61834158 Msa0862210:CDS 35.0%
GATTCCTTCTAGATCATTTG+AGG + chr5_4:61834236-61834255 None:intergenic 35.0%
! AAGATGATCGGCTTATCATT+AGG - chr5_4:61834262-61834281 Msa0862210:intron 35.0%
AAGTCTTCATCTGAATGATG+AGG - chr5_4:61834333-61834352 Msa0862210:CDS 35.0%
AGTTTCTATATCAGCTTGTC+AGG + chr5_4:61834425-61834444 None:intergenic 35.0%
GACAAGCTGATATAGAAACT+TGG - chr5_4:61834425-61834444 Msa0862210:five_prime_UTR 35.0%
ATGATAACCCTAACCTGTGA+AGG + chr5_4:61832806-61832825 None:intergenic 40.0%
TAGTTTGATCCAAGTAGTGG+GGG + chr5_4:61833168-61833187 None:intergenic 40.0%
CATGTACTAACCTAACTCTC+TGG + chr5_4:61833253-61833272 None:intergenic 40.0%
GGTTATGAATGGAACAGTAG+TGG - chr5_4:61833337-61833356 Msa0862210:three_prime_UTR 40.0%
! CAACAGCACTCCATTGATTA+GGG + chr5_4:61833433-61833452 None:intergenic 40.0%
! ACAACAGCACTCCATTGATT+AGG + chr5_4:61833434-61833453 None:intergenic 40.0%
TTACCATCACAAATCCTCAC+AGG + chr5_4:61833635-61833654 None:intergenic 40.0%
TGTGAGGATTTGTGATGGTA+AGG - chr5_4:61833634-61833653 Msa0862210:three_prime_UTR 40.0%
GAAATTTGTCCTGTTTGTCG+TGG - chr5_4:61833716-61833735 Msa0862210:three_prime_UTR 40.0%
AATTTGTCCTGTTTGTCGTG+GGG - chr5_4:61833718-61833737 Msa0862210:three_prime_UTR 40.0%
AAACTCGAAGCAACTTTAGG+AGG + chr5_4:61833758-61833777 None:intergenic 40.0%
! TCCTAAAGTTGCTTCGAGTT+TGG - chr5_4:61833757-61833776 Msa0862210:three_prime_UTR 40.0%
! CCTAAAGTTGCTTCGAGTTT+GGG - chr5_4:61833758-61833777 Msa0862210:three_prime_UTR 40.0%
! GCTTCGAGTTTGGGAAATAT+TGG - chr5_4:61833767-61833786 Msa0862210:three_prime_UTR 40.0%
ACTCACTAGCAAAGAGTTAG+TGG - chr5_4:61833904-61833923 Msa0862210:three_prime_UTR 40.0%
CATTCAGAGGTTACTGTTGA+TGG - chr5_4:61833956-61833975 Msa0862210:three_prime_UTR 40.0%
TGATGGCAAAAAGTTCGGTT+TGG - chr5_4:61833973-61833992 Msa0862210:three_prime_UTR 40.0%
! GTTGCTCGTGTGAAAGATTT+TGG - chr5_4:61834007-61834026 Msa0862210:three_prime_UTR 40.0%
!! GCTTTTGGTTATGACTTGTG+TGG - chr5_4:61834094-61834113 Msa0862210:CDS 40.0%
TCGTCCTCAAATGATCTAGA+AGG - chr5_4:61834229-61834248 Msa0862210:intron 40.0%
! ATGATCGGCTTATCATTAGG+TGG - chr5_4:61834265-61834284 Msa0862210:intron 40.0%
AGAGCTGCCTTATGATCTAT+TGG - chr5_4:61834291-61834310 Msa0862210:intron 40.0%
TGCTCCTCCAATAGATCATA+AGG + chr5_4:61834301-61834320 None:intergenic 40.0%
TCTGAATGATGAGGAATCTG+AGG - chr5_4:61834342-61834361 Msa0862210:CDS 40.0%
ATGATAACCCTAACCTGTGA+AGG + chr5_4:61832806-61832825 None:intergenic 40.0%
TAGTTTGATCCAAGTAGTGG+GGG + chr5_4:61833168-61833187 None:intergenic 40.0%
CATGTACTAACCTAACTCTC+TGG + chr5_4:61833253-61833272 None:intergenic 40.0%
GGTTATGAATGGAACAGTAG+TGG - chr5_4:61833337-61833356 Msa0862210:three_prime_UTR 40.0%
! CAACAGCACTCCATTGATTA+GGG + chr5_4:61833433-61833452 None:intergenic 40.0%
! ACAACAGCACTCCATTGATT+AGG + chr5_4:61833434-61833453 None:intergenic 40.0%
TTACCATCACAAATCCTCAC+AGG + chr5_4:61833635-61833654 None:intergenic 40.0%
TGTGAGGATTTGTGATGGTA+AGG - chr5_4:61833634-61833653 Msa0862210:three_prime_UTR 40.0%
GAAATTTGTCCTGTTTGTCG+TGG - chr5_4:61833716-61833735 Msa0862210:three_prime_UTR 40.0%
AATTTGTCCTGTTTGTCGTG+GGG - chr5_4:61833718-61833737 Msa0862210:three_prime_UTR 40.0%
AAACTCGAAGCAACTTTAGG+AGG + chr5_4:61833758-61833777 None:intergenic 40.0%
! TCCTAAAGTTGCTTCGAGTT+TGG - chr5_4:61833757-61833776 Msa0862210:three_prime_UTR 40.0%
! CCTAAAGTTGCTTCGAGTTT+GGG - chr5_4:61833758-61833777 Msa0862210:three_prime_UTR 40.0%
! GCTTCGAGTTTGGGAAATAT+TGG - chr5_4:61833767-61833786 Msa0862210:three_prime_UTR 40.0%
ACTCACTAGCAAAGAGTTAG+TGG - chr5_4:61833904-61833923 Msa0862210:three_prime_UTR 40.0%
CATTCAGAGGTTACTGTTGA+TGG - chr5_4:61833956-61833975 Msa0862210:three_prime_UTR 40.0%
TGATGGCAAAAAGTTCGGTT+TGG - chr5_4:61833973-61833992 Msa0862210:three_prime_UTR 40.0%
! GTTGCTCGTGTGAAAGATTT+TGG - chr5_4:61834007-61834026 Msa0862210:three_prime_UTR 40.0%
!! GCTTTTGGTTATGACTTGTG+TGG - chr5_4:61834094-61834113 Msa0862210:CDS 40.0%
TCGTCCTCAAATGATCTAGA+AGG - chr5_4:61834229-61834248 Msa0862210:intron 40.0%
! ATGATCGGCTTATCATTAGG+TGG - chr5_4:61834265-61834284 Msa0862210:intron 40.0%
AGAGCTGCCTTATGATCTAT+TGG - chr5_4:61834291-61834310 Msa0862210:intron 40.0%
TGCTCCTCCAATAGATCATA+AGG + chr5_4:61834301-61834320 None:intergenic 40.0%
TCTGAATGATGAGGAATCTG+AGG - chr5_4:61834342-61834361 Msa0862210:CDS 40.0%
ATTGCAGAGGGTTTCTGATG+CGG + chr5_4:61832723-61832742 None:intergenic 45.0%
TCGTTGCGAGTTGCTTATTG+CGG + chr5_4:61832771-61832790 None:intergenic 45.0%
ATAACCCTAACCTGTGAAGG+AGG + chr5_4:61832803-61832822 None:intergenic 45.0%
! TTAGCGGTGTTTAGTTCGAG+TGG + chr5_4:61833044-61833063 None:intergenic 45.0%
ATTTACAACCCCCCACTACT+TGG - chr5_4:61833156-61833175 Msa0862210:three_prime_UTR 45.0%
! AGTTTGATCCAAGTAGTGGG+GGG + chr5_4:61833167-61833186 None:intergenic 45.0%
!!! TTTTTCGAGTCGGGTTCAGT+TGG + chr5_4:61833287-61833306 None:intergenic 45.0%
GTTCCTGTGAGGATTTGTGA+TGG - chr5_4:61833629-61833648 Msa0862210:three_prime_UTR 45.0%
ATCAAATCCCCACGACAAAC+AGG + chr5_4:61833728-61833747 None:intergenic 45.0%
CCCAAACTCGAAGCAACTTT+AGG + chr5_4:61833761-61833780 None:intergenic 45.0%
! AAACAGCGTGCCGATGTAAT+CGG + chr5_4:61833842-61833861 None:intergenic 45.0%
ATATGCTGTGCTTGATGTCG+AGG - chr5_4:61833928-61833947 Msa0862210:three_prime_UTR 45.0%
!! GTTCGGTTTGGCTAATGTTG+AGG - chr5_4:61833985-61834004 Msa0862210:three_prime_UTR 45.0%
! GAATTGGAGGAGTACATAGG+AGG - chr5_4:61834142-61834161 Msa0862210:CDS 45.0%
GCTGCCTTATGATCTATTGG+AGG - chr5_4:61834294-61834313 Msa0862210:intron 45.0%
AGGCGAAGAGTAAGAAAGTG+AGG - chr5_4:61834362-61834381 Msa0862210:CDS 45.0%
CGAAGAGTAAGAAAGTGAGG+AGG - chr5_4:61834365-61834384 Msa0862210:CDS 45.0%
ATTGCAGAGGGTTTCTGATG+CGG + chr5_4:61832723-61832742 None:intergenic 45.0%
TCGTTGCGAGTTGCTTATTG+CGG + chr5_4:61832771-61832790 None:intergenic 45.0%
ATAACCCTAACCTGTGAAGG+AGG + chr5_4:61832803-61832822 None:intergenic 45.0%
! TTAGCGGTGTTTAGTTCGAG+TGG + chr5_4:61833044-61833063 None:intergenic 45.0%
ATTTACAACCCCCCACTACT+TGG - chr5_4:61833156-61833175 Msa0862210:three_prime_UTR 45.0%
! AGTTTGATCCAAGTAGTGGG+GGG + chr5_4:61833167-61833186 None:intergenic 45.0%
!!! TTTTTCGAGTCGGGTTCAGT+TGG + chr5_4:61833287-61833306 None:intergenic 45.0%
GTTCCTGTGAGGATTTGTGA+TGG - chr5_4:61833629-61833648 Msa0862210:three_prime_UTR 45.0%
ATCAAATCCCCACGACAAAC+AGG + chr5_4:61833728-61833747 None:intergenic 45.0%
CCCAAACTCGAAGCAACTTT+AGG + chr5_4:61833761-61833780 None:intergenic 45.0%
! AAACAGCGTGCCGATGTAAT+CGG + chr5_4:61833842-61833861 None:intergenic 45.0%
ATATGCTGTGCTTGATGTCG+AGG - chr5_4:61833928-61833947 Msa0862210:three_prime_UTR 45.0%
!! GTTCGGTTTGGCTAATGTTG+AGG - chr5_4:61833985-61834004 Msa0862210:three_prime_UTR 45.0%
! GAATTGGAGGAGTACATAGG+AGG - chr5_4:61834142-61834161 Msa0862210:CDS 45.0%
GCTGCCTTATGATCTATTGG+AGG - chr5_4:61834294-61834313 Msa0862210:intron 45.0%
AGGCGAAGAGTAAGAAAGTG+AGG - chr5_4:61834362-61834381 Msa0862210:CDS 45.0%
CGAAGAGTAAGAAAGTGAGG+AGG - chr5_4:61834365-61834384 Msa0862210:CDS 45.0%
GCATCAGAAACCCTCTGCAA+TGG - chr5_4:61832722-61832741 Msa0862210:three_prime_UTR 50.0%
AGAAACCCTCTGCAATGGAG+TGG - chr5_4:61832727-61832746 Msa0862210:three_prime_UTR 50.0%
TGTTGCCACTCCATTGCAGA+GGG + chr5_4:61832735-61832754 None:intergenic 50.0%
ACCTCCTCCTTCACAGGTTA+GGG - chr5_4:61832796-61832815 Msa0862210:three_prime_UTR 50.0%
ACAGGGAATGGTGTGGAATG+TGG + chr5_4:61833006-61833025 None:intergenic 50.0%
ATTGGCAACAGGGAATGGTG+TGG + chr5_4:61833013-61833032 None:intergenic 50.0%
! TAAAGGCACAGGTTCCTGTG+AGG - chr5_4:61833618-61833637 Msa0862210:three_prime_UTR 50.0%
! GGTAAGGAGCTTGTTTCTCG+TGG - chr5_4:61833650-61833669 Msa0862210:three_prime_UTR 50.0%
!! TCGGCACGCTGTTTCTTAGT+TGG - chr5_4:61833848-61833867 Msa0862210:three_prime_UTR 50.0%
TGTCGAGGAGGTTCATTCAG+AGG - chr5_4:61833943-61833962 Msa0862210:three_prime_UTR 50.0%
GACTTGTGTGGGGTGAATAG+TGG - chr5_4:61834106-61834125 Msa0862210:CDS 50.0%
! TTGGAGGAGTACATAGGAGG+TGG - chr5_4:61834145-61834164 Msa0862210:CDS 50.0%
GAGAAACGCCAGAAGAAACG+CGG - chr5_4:61834196-61834215 Msa0862210:intron 50.0%
AGAAACGCCAGAAGAAACGC+GGG - chr5_4:61834197-61834216 Msa0862210:intron 50.0%
TGATCTATTGGAGGAGCAGC+TGG - chr5_4:61834303-61834322 Msa0862210:CDS 50.0%
GATCTATTGGAGGAGCAGCT+GGG - chr5_4:61834304-61834323 Msa0862210:CDS 50.0%
GCATCAGAAACCCTCTGCAA+TGG - chr5_4:61832722-61832741 Msa0862210:three_prime_UTR 50.0%
AGAAACCCTCTGCAATGGAG+TGG - chr5_4:61832727-61832746 Msa0862210:three_prime_UTR 50.0%
TGTTGCCACTCCATTGCAGA+GGG + chr5_4:61832735-61832754 None:intergenic 50.0%
ACCTCCTCCTTCACAGGTTA+GGG - chr5_4:61832796-61832815 Msa0862210:three_prime_UTR 50.0%
ACAGGGAATGGTGTGGAATG+TGG + chr5_4:61833006-61833025 None:intergenic 50.0%
ATTGGCAACAGGGAATGGTG+TGG + chr5_4:61833013-61833032 None:intergenic 50.0%
! TAAAGGCACAGGTTCCTGTG+AGG - chr5_4:61833618-61833637 Msa0862210:three_prime_UTR 50.0%
! GGTAAGGAGCTTGTTTCTCG+TGG - chr5_4:61833650-61833669 Msa0862210:three_prime_UTR 50.0%
!! TCGGCACGCTGTTTCTTAGT+TGG - chr5_4:61833848-61833867 Msa0862210:three_prime_UTR 50.0%
TGTCGAGGAGGTTCATTCAG+AGG - chr5_4:61833943-61833962 Msa0862210:three_prime_UTR 50.0%
GACTTGTGTGGGGTGAATAG+TGG - chr5_4:61834106-61834125 Msa0862210:CDS 50.0%
! TTGGAGGAGTACATAGGAGG+TGG - chr5_4:61834145-61834164 Msa0862210:CDS 50.0%
GAGAAACGCCAGAAGAAACG+CGG - chr5_4:61834196-61834215 Msa0862210:intron 50.0%
AGAAACGCCAGAAGAAACGC+GGG - chr5_4:61834197-61834216 Msa0862210:intron 50.0%
TGATCTATTGGAGGAGCAGC+TGG - chr5_4:61834303-61834322 Msa0862210:CDS 50.0%
GATCTATTGGAGGAGCAGCT+GGG - chr5_4:61834304-61834323 Msa0862210:CDS 50.0%
GTGTTGCCACTCCATTGCAG+AGG + chr5_4:61832736-61832755 None:intergenic 55.0%
GGAGTGGCAACACCACCTTA+CGG - chr5_4:61832743-61832762 Msa0862210:three_prime_UTR 55.0%
TTGCTTATTGCGGCGCCGTA+AGG + chr5_4:61832761-61832780 None:intergenic 55.0%
ACAACCACCTCCTCCTTCAC+AGG - chr5_4:61832790-61832809 Msa0862210:three_prime_UTR 55.0%
CTAACCTGTGAAGGAGGAGG+TGG + chr5_4:61832797-61832816 None:intergenic 55.0%
CACCTCCTCCTTCACAGGTT+AGG - chr5_4:61832795-61832814 Msa0862210:three_prime_UTR 55.0%
ACCCTAACCTGTGAAGGAGG+AGG + chr5_4:61832800-61832819 None:intergenic 55.0%
CGAGTCGGGTTCAGTTGGAA+GGG + chr5_4:61833282-61833301 None:intergenic 55.0%
TCGAGTCGGGTTCAGTTGGA+AGG + chr5_4:61833283-61833302 None:intergenic 55.0%
TGCTGTGCTTGATGTCGAGG+AGG - chr5_4:61833931-61833950 Msa0862210:three_prime_UTR 55.0%
GTGTTGCCACTCCATTGCAG+AGG + chr5_4:61832736-61832755 None:intergenic 55.0%
GGAGTGGCAACACCACCTTA+CGG - chr5_4:61832743-61832762 Msa0862210:three_prime_UTR 55.0%
TTGCTTATTGCGGCGCCGTA+AGG + chr5_4:61832761-61832780 None:intergenic 55.0%
ACAACCACCTCCTCCTTCAC+AGG - chr5_4:61832790-61832809 Msa0862210:three_prime_UTR 55.0%
CTAACCTGTGAAGGAGGAGG+TGG + chr5_4:61832797-61832816 None:intergenic 55.0%
CACCTCCTCCTTCACAGGTT+AGG - chr5_4:61832795-61832814 Msa0862210:three_prime_UTR 55.0%
ACCCTAACCTGTGAAGGAGG+AGG + chr5_4:61832800-61832819 None:intergenic 55.0%
CGAGTCGGGTTCAGTTGGAA+GGG + chr5_4:61833282-61833301 None:intergenic 55.0%
TCGAGTCGGGTTCAGTTGGA+AGG + chr5_4:61833283-61833302 None:intergenic 55.0%
TGCTGTGCTTGATGTCGAGG+AGG - chr5_4:61833931-61833950 Msa0862210:three_prime_UTR 55.0%
CTTATTGCGGCGCCGTAAGG+TGG + chr5_4:61832758-61832777 None:intergenic 60.0%
! CGCGCATTGGCAACAGGGAA+TGG + chr5_4:61833018-61833037 None:intergenic 60.0%
! GGAGACGCGCATTGGCAACA+GGG + chr5_4:61833023-61833042 None:intergenic 60.0%
! TGGAGACGCGCATTGGCAAC+AGG + chr5_4:61833024-61833043 None:intergenic 60.0%
GTTCGAGTGGAGACGCGCAT+TGG + chr5_4:61833031-61833050 None:intergenic 60.0%
GACGCTTCCCGCGTTTCTTC+TGG + chr5_4:61834207-61834226 None:intergenic 60.0%
CTATTGGAGGAGCAGCTGGG+TGG - chr5_4:61834307-61834326 Msa0862210:CDS 60.0%
CTTATTGCGGCGCCGTAAGG+TGG + chr5_4:61832758-61832777 None:intergenic 60.0%
! CGCGCATTGGCAACAGGGAA+TGG + chr5_4:61833018-61833037 None:intergenic 60.0%
! GGAGACGCGCATTGGCAACA+GGG + chr5_4:61833023-61833042 None:intergenic 60.0%
! TGGAGACGCGCATTGGCAAC+AGG + chr5_4:61833024-61833043 None:intergenic 60.0%
GTTCGAGTGGAGACGCGCAT+TGG + chr5_4:61833031-61833050 None:intergenic 60.0%
GACGCTTCCCGCGTTTCTTC+TGG + chr5_4:61834207-61834226 None:intergenic 60.0%
CTATTGGAGGAGCAGCTGGG+TGG - chr5_4:61834307-61834326 Msa0862210:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 61832609 61834501 61832609 ID=Msa0862210;Name=Msa0862210
chr5_4 mRNA 61832609 61834501 61832609 ID=Msa0862210-mRNA-1;Parent=Msa0862210;Name=Msa0862210-mRNA-1;_AED=0.00;_eAED=0.00;_QI=101|1|1|1|0|0.5|2|1448|73
chr5_4 exon 61832609 61834176 61832609 ID=Msa0862210-mRNA-1:exon:19201;Parent=Msa0862210-mRNA-1
chr5_4 exon 61834299 61834501 61834299 ID=Msa0862210-mRNA-1:exon:19200;Parent=Msa0862210-mRNA-1
chr5_4 five_prime_UTR 61834401 61834501 61834401 ID=Msa0862210-mRNA-1:five_prime_utr;Parent=Msa0862210-mRNA-1
chr5_4 CDS 61834299 61834400 61834299 ID=Msa0862210-mRNA-1:cds;Parent=Msa0862210-mRNA-1
chr5_4 CDS 61834057 61834176 61834057 ID=Msa0862210-mRNA-1:cds;Parent=Msa0862210-mRNA-1
chr5_4 three_prime_UTR 61832609 61834056 61832609 ID=Msa0862210-mRNA-1:three_prime_utr;Parent=Msa0862210-mRNA-1
Gene Sequence

>Msa0862210

ATGCACAAAGCCGCATCAGAAACCCTCTGCAATGGAGTGGCAACACCACCTTACGGCGCCGCAATAAGCAACTCGCAACGACAACCACCTCCTCCTTCACAGGGGAACACACTTTTTTCTTTCGATCATCGAAAATGTCAAGATGCATACCATTGGATCAACAAAATCTTGCCACATTCCACACCATTCCCTGTTGCCAATGCGCGTCTCCACTCGAACTAA
Protein sequence

>Msa0862210

MHKAASETLCNGVATPPYGAAISNSQRQPPPPSQGNTLFSFDHRKCQDAYHWINKILPHSTPFPVANARLHSN*