AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0867330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867330 MtrunA17_Chr6g0484401 97.705 828 19 0 1 828 1 828 0.0 1667
Msa0867330 MtrunA17_Chr8g0391121 72.694 824 209 8 1 816 1 816 0.0 1208
Msa0867330 MtrunA17_Chr4g0064531 23.971 559 337 27 72 595 51 556 1.13e-14 77.8
Msa0867330 MtrunA17_Chr2g0313621 32.759 116 73 2 613 724 285 399 2.80e-14 77.0
Msa0867330 MtrunA17_Chr2g0313621 27.586 261 159 13 31 273 9 257 4.00e-11 67.0
Msa0867330 MtrunA17_Chr1g0156811 20.463 518 338 23 97 595 69 531 5.91e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867330 AT3G18370.1 58.180 813 321 5 15 821 14 813 0.0 896
Msa0867330 AT1G05500.1 23.755 522 327 24 101 595 73 550 3.53e-15 80.1
Msa0867330 AT3G14590.4 33.636 110 68 2 619 724 201 309 9.33e-15 79.0
Msa0867330 AT3G14590.5 33.636 110 68 2 619 724 203 311 9.85e-15 79.0
Msa0867330 AT3G14590.1 33.636 110 68 2 619 724 244 352 1.01e-14 79.0
Msa0867330 AT3G14590.3 33.636 110 68 2 619 724 258 366 1.02e-14 79.0
Msa0867330 AT3G14590.2 33.636 110 68 2 619 724 289 397 1.18e-14 78.6
Msa0867330 AT1G53590.1 34.545 110 67 2 619 724 288 396 1.67e-13 75.1
Msa0867330 AT1G53590.1 26.820 261 161 13 31 273 6 254 6.14e-11 66.6

Find 224 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGCCTCTTCTGCATTTC+TGG 0.020626 6_1:-70591 None:intergenic
CTCTGCCTGCTGTTGATTTA+AGG 0.057497 6_1:+68166 Msa0867330:CDS
TCCTCTTGCACTTGCTGTTT+GGG 0.181803 6_1:+65492 Msa0867330:CDS
ACAAATGTTTGCATCAATTA+AGG 0.222028 6_1:+65044 Msa0867330:five_prime_UTR
ACCTCTTCAAGGTGTGAAAA+AGG 0.223893 6_1:+70536 Msa0867330:CDS
CTCACTCTTGTGTTTGTTGT+AGG 0.236122 6_1:-64954 None:intergenic
TGCTGTTGATTTAAGGAAAA+AGG 0.242580 6_1:+68173 Msa0867330:CDS
ATCTCACCTGGCTAGGAATT+TGG 0.243430 6_1:-70647 None:intergenic
TTCCTCTTGCACTTGCTGTT+TGG 0.250842 6_1:+65491 Msa0867330:CDS
AACTCCAATTGTAACTATAA+AGG 0.264794 6_1:-71474 None:intergenic
TGGTAGTGCACAAGTAAATT+TGG 0.266835 6_1:+69510 Msa0867330:CDS
AACACACCGTTGATCCTTCT+TGG 0.266918 6_1:-69633 None:intergenic
GGAACTCCTATAAAGTTTAT+TGG 0.275244 6_1:-68232 None:intergenic
AGTGGCCCGGTGTTTCTTCT+TGG 0.278181 6_1:+67738 Msa0867330:CDS
TTACAAGAAATCTTGGTTTC+CGG 0.287505 6_1:-67004 None:intergenic
TCTAGGAAGTTGTGAAATTA+AGG 0.289570 6_1:+68497 Msa0867330:CDS
ATGGGATGCACCGTTTAATA+TGG 0.293962 6_1:+68401 Msa0867330:CDS
ATGACTAAACTGTGACAAAA+TGG 0.303136 6_1:+71585 Msa0867330:three_prime_UTR
GTTTGATTCCAAACAGGATT+TGG 0.303221 6_1:-69406 None:intergenic
TAAGAAACATGTACAAAATA+TGG 0.305516 6_1:-71684 None:intergenic
ACTCCAATTGTAACTATAAA+GGG 0.311516 6_1:-71473 None:intergenic
CCATATTGCAATTTAATGTA+TGG 0.314578 6_1:-69271 None:intergenic
TTCAGAATGTCTTCTGCTTA+AGG 0.324131 6_1:-71433 None:intergenic
AGTGAAGTTCCTTTCTTAGT+AGG 0.330215 6_1:+71774 Msa0867330:three_prime_UTR
TATGCATCGACAATGTAAAT+AGG 0.339886 6_1:+71504 Msa0867330:three_prime_UTR
TTCGATAATGACCAGGGTTC+AGG 0.342828 6_1:+70046 Msa0867330:intron
CACTTATCAGCCATCTGGTT+TGG 0.344118 6_1:-70510 None:intergenic
TGGGCAATAGGACCAGATTC+CGG 0.349699 6_1:+68890 Msa0867330:CDS
CCATACATTAAATTGCAATA+TGG 0.350240 6_1:+69271 Msa0867330:CDS
TGCTGTTTGGGCTACTATAC+AGG 0.355018 6_1:+65504 Msa0867330:CDS
GGGCAATAGGACCAGATTCC+GGG 0.357507 6_1:+68891 Msa0867330:CDS
CCAGAGTTGGCACCCTCAAA+TGG 0.360206 6_1:-68965 None:intergenic
GCACAAGTGATCCATATGTT+AGG 0.369223 6_1:+70137 Msa0867330:CDS
GCTTCTTCTCAGCAAGATAA+AGG 0.369968 6_1:+71371 Msa0867330:CDS
GTGACTGCTGAGAGTTGTTT+CGG 0.370904 6_1:-69141 None:intergenic
GACCCCTTTATAGTTACAAT+TGG 0.373367 6_1:+71470 Msa0867330:three_prime_UTR
GCCCGGTGTTTCTTCTTGGC+TGG 0.374401 6_1:+67742 Msa0867330:CDS
ATTAAACGGTGCATCCCATC+TGG 0.374963 6_1:-68397 None:intergenic
CTCATACTCCAAATCCTGTT+TGG 0.378242 6_1:+69398 Msa0867330:CDS
GAGTGAGCTAGAAACTTTAG+AGG 0.379372 6_1:+71305 Msa0867330:CDS
AACTCTCAGCAGTCACTTAA+CGG 0.382207 6_1:+69148 Msa0867330:CDS
ATAGAACTTGTTCTGATTGA+AGG 0.383494 6_1:+70085 Msa0867330:CDS
TAGTCACACTTCACATTGTT+GGG 0.384351 6_1:-68474 None:intergenic
TTGCCTCCTAGATGCCTTGA+AGG 0.385473 6_1:-68253 None:intergenic
ATCAAAGGACTTCCATCATC+AGG 0.388943 6_1:-70408 None:intergenic
CTAGGGTCTGGTTCCATTGA+GGG 0.391061 6_1:-70380 None:intergenic
AATGCAGAAGAGGCAAAGTA+TGG 0.391593 6_1:+70596 Msa0867330:CDS
CCATTTGAGGGTGCCAACTC+TGG 0.399069 6_1:+68965 Msa0867330:CDS
AACAGATGATGATCAAGTTT+AGG 0.410466 6_1:+71238 Msa0867330:CDS
CCTCTTGAAAGAGTGCGTTC+TGG 0.411282 6_1:+69571 Msa0867330:CDS
GAAGCAAAATGCTCATTTCA+TGG 0.412459 6_1:-67445 None:intergenic
TCAACAATAATGTGGGCAAT+AGG 0.413814 6_1:+68878 Msa0867330:CDS
AAGCTTGGGATTAAAATAGT+TGG 0.413925 6_1:-66642 None:intergenic
CCTCCTAGCTTGGCCTTACA+AGG 0.414305 6_1:+67185 Msa0867330:CDS
GCATCTAGGAGGCAACAAAA+TGG 0.417233 6_1:+68261 Msa0867330:CDS
TTTACACAGACGGTGTAAAC+AGG 0.421671 6_1:-71636 None:intergenic
AATGACCAGGGTTCAGGCTC+AGG 0.421962 6_1:+70052 Msa0867330:intron
ACCCAAGCAATCAAAACAAC+TGG 0.423199 6_1:-65433 None:intergenic
ACCAAGGTCAATTACTCAAA+AGG 0.423227 6_1:-65212 None:intergenic
TCAAATATTCAGTTAAGAAC+CGG 0.423889 6_1:+69175 Msa0867330:CDS
TTAATCCCAAGCTTTCTTCA+AGG 0.424545 6_1:+66651 Msa0867330:CDS
TCCAGGCACGTTTGAAGCTC+CGG 0.425153 6_1:+66985 Msa0867330:intron
CCATAGTGTACCCTAACATA+TGG 0.427638 6_1:-70148 None:intergenic
AATTTGGAAGGACTGGTTGA+TGG 0.427955 6_1:+69526 Msa0867330:CDS
TTTGCTATAACCCCGGAATC+TGG 0.428084 6_1:-68902 None:intergenic
ATAAATTGTTGACAGAAATC+TGG 0.428621 6_1:+66618 Msa0867330:CDS
TAGAGGACTTGGATAAGAAA+TGG 0.430980 6_1:+66458 Msa0867330:CDS
ATTCGTGCAGTTCCCATCAA+TGG 0.433397 6_1:-67485 None:intergenic
GTGAAGTTCCTTTCTTAGTA+GGG 0.435098 6_1:+71775 Msa0867330:three_prime_UTR
CCATATGTTAGGGTACACTA+TGG 0.435681 6_1:+70148 Msa0867330:CDS
TGGATCAACCAATGGTTCTT+CGG 0.436795 6_1:+68281 Msa0867330:CDS
ATGTAGGTAGTAACGCATTA+TGG 0.437857 6_1:-70446 None:intergenic
CTTAAAATAACTGTTGTAGA+AGG 0.438546 6_1:+69205 Msa0867330:CDS
ACACCGGGCCACTCGGTAGC+TGG 0.439847 6_1:-67728 None:intergenic
TATTAACAGTCTTCATATCA+AGG 0.439990 6_1:+67511 Msa0867330:CDS
AGGGTTGTTACTAGAAAACT+TGG 0.441259 6_1:-65141 None:intergenic
CTCAGCAAGATAAAGGAACT+TGG 0.444109 6_1:+71378 Msa0867330:CDS
AGCTTGGGATTAAAATAGTT+GGG 0.445097 6_1:-66641 None:intergenic
ATCGAAGATGGAAATCTTGA+AGG 0.445397 6_1:+71267 Msa0867330:CDS
CAGGGTTCAGGCTCAGGAAA+TGG 0.446550 6_1:+70058 Msa0867330:intron
TGATAACCTTGAAGAAAGCT+TGG 0.448246 6_1:-66657 None:intergenic
ATAGTCACACTTCACATTGT+TGG 0.448368 6_1:-68475 None:intergenic
ACTTTATAGGAGTTCCTTCA+AGG 0.448536 6_1:+68239 Msa0867330:CDS
GTGAGAGTTGGAGTTGCCTT+TGG 0.449806 6_1:+67683 Msa0867330:CDS
TGGTGTAATTTACTCAAAGA+AGG 0.451877 6_1:-70627 None:intergenic
AGTGCTCTTCCATCTAAAAT+CGG 0.452353 6_1:-67632 None:intergenic
ATGGATCAGTCAGGGATGTA+TGG 0.453137 6_1:+69545 Msa0867330:CDS
AGGATCATGCCCTCCTAGCT+TGG 0.455732 6_1:+67175 Msa0867330:CDS
AAGGAGAACCGATGTCAGAC+TGG 0.458841 6_1:+68365 Msa0867330:CDS
TCATGCAAAACCATATTAAA+CGG 0.459628 6_1:-68411 None:intergenic
TGACCATCGCATCCCTTGTA+AGG 0.460765 6_1:-67198 None:intergenic
TTGTGGAGATGAAATTGAAA+TGG 0.461121 6_1:+68937 Msa0867330:CDS
TCAATCGTTTGATTCCAAAC+AGG 0.462679 6_1:-69412 None:intergenic
GAGAAGAATTAATGATCTCT+TGG 0.464473 6_1:-71401 None:intergenic
TAAGCTTGCGAAGCCATTGA+TGG 0.465366 6_1:+67472 Msa0867330:CDS
TTCCATCATCAGGGAACTCT+AGG 0.466047 6_1:-70398 None:intergenic
GTATCCACTTATCAGCCATC+TGG 0.470024 6_1:-70515 None:intergenic
GTATGTAGGTCCTTGTCGTC+AGG 0.478539 6_1:-68312 None:intergenic
TCCTTTGATGCTTTATGTGA+AGG 0.479609 6_1:+70422 Msa0867330:CDS
ACCCTAGAGTTCCCTGATGA+TGG 0.482730 6_1:+70396 Msa0867330:CDS
TTATCAGCCATCTGGTTTGG+AGG 0.483822 6_1:-70507 None:intergenic
GTTGGAGTTGCCTTTGGAAG+CGG 0.486786 6_1:+67689 Msa0867330:CDS
ACAAAACTCTAACCCCTCAA+TGG 0.492964 6_1:+70367 Msa0867330:CDS
CATCAGGGAACTCTAGGGTC+TGG 0.493217 6_1:-70392 None:intergenic
GACTGGTTGATGGATCAGTC+AGG 0.494486 6_1:+69536 Msa0867330:CDS
TCTAGGGTCTGGTTCCATTG+AGG 0.494707 6_1:-70381 None:intergenic
TGCTTGCTTTGCTATAACCC+CGG 0.495826 6_1:-68909 None:intergenic
CAAACTACTTGTAGAGGACT+TGG 0.496318 6_1:+66447 Msa0867330:CDS
GATAACCTTGAAGAAAGCTT+GGG 0.498893 6_1:-66656 None:intergenic
AACGTCTTCCGAAGAACCAT+TGG 0.502951 6_1:-68289 None:intergenic
GCCCAAACAGCAAGTGCAAG+AGG 0.503028 6_1:-65493 None:intergenic
TTCGATTGATAGTATTGAAG+AGG 0.504507 6_1:+65351 Msa0867330:CDS
TTTAGGTCTCAAATCGAAGA+TGG 0.504600 6_1:+71255 Msa0867330:CDS
CATATAGCCCATCACACCAT+TGG 0.505510 6_1:+66577 Msa0867330:intron
CATGTACAAGCTATAAGTTA+TGG 0.505918 6_1:-71727 None:intergenic
TATGCATCCCCTACTAAGAA+AGG 0.507734 6_1:-71783 None:intergenic
ACTTGTTCTGATTGAAGGGA+GGG 0.509206 6_1:+70090 Msa0867330:CDS
TAAAATAGAAGCCATAAAAG+TGG 0.509234 6_1:+69606 Msa0867330:CDS
AAGGAAAATCTCACCTGGCT+AGG 0.510015 6_1:-70654 None:intergenic
CACAAGTGATCCATATGTTA+GGG 0.511301 6_1:+70138 Msa0867330:CDS
TTACTACCTACATCAAGTAT+AGG 0.513003 6_1:+70456 Msa0867330:CDS
GGAGTTCCTTCAAGGCATCT+AGG 0.513204 6_1:+68247 Msa0867330:CDS
CCAAGGTCAATTACTCAAAA+GGG 0.513856 6_1:-65211 None:intergenic
CAGAGTTGGCACCCTCAAAT+GGG 0.516145 6_1:-68964 None:intergenic
ACGATTGAATTTGATGAGGT+TGG 0.517002 6_1:+69427 Msa0867330:CDS
ATGGTCAACTATCGGCGAGC+AGG 0.517210 6_1:+67214 Msa0867330:CDS
ACAAGTAAATTTGGAAGGAC+TGG 0.517450 6_1:+69519 Msa0867330:CDS
CAAACCAGATGGCTGATAAG+TGG 0.520171 6_1:+70511 Msa0867330:CDS
ATTACACCAAATTCCTAGCC+AGG 0.524902 6_1:+70641 Msa0867330:CDS
GAAATGGTTGTCCCATTTGA+GGG 0.525655 6_1:+68953 Msa0867330:CDS
CATAACTTATAGCTTGTACA+TGG 0.527824 6_1:+71728 Msa0867330:three_prime_UTR
AATAACTGTTGTAGAAGGAA+AGG 0.529513 6_1:+69210 Msa0867330:CDS
GGAGTTGCCTTTGGAAGCGG+TGG 0.531014 6_1:+67692 Msa0867330:CDS
AAGTTCCAGAAATGCAGAAG+AGG 0.531109 6_1:+70586 Msa0867330:CDS
GATAAGTGGATACCTCTTCA+AGG 0.532440 6_1:+70525 Msa0867330:CDS
CCTCTACAAGTAGTTTGCGT+TGG 0.534467 6_1:-66441 None:intergenic
TGAAATGGTTGTCCCATTTG+AGG 0.535808 6_1:+68952 Msa0867330:CDS
TAGAACTTGTTCTGATTGAA+GGG 0.536589 6_1:+70086 Msa0867330:CDS
ACAACAGTTGAATTGAAAAG+TGG 0.540579 6_1:-65000 None:intergenic
CAGTGCTCCAATGGTGTGAT+GGG 0.541796 6_1:-66584 None:intergenic
CACCAGCCAAGAAGAAACAC+CGG 0.542319 6_1:-67744 None:intergenic
ACAGTGCTCCAATGGTGTGA+TGG 0.543090 6_1:-66585 None:intergenic
TTACAGCGAGTCATGCAACT+TGG 0.544870 6_1:+67407 Msa0867330:intron
CTTGTAAGGCCAAGCTAGGA+GGG 0.545845 6_1:-67184 None:intergenic
AGCCATTCACAGTGCTCCAA+TGG 0.546401 6_1:-66593 None:intergenic
ATCACTTGTGCCTCTGAGAT+CGG 0.550679 6_1:-70125 None:intergenic
CACCATTGGAGCACTGTGAA+TGG 0.551781 6_1:+66591 Msa0867330:CDS
TAGGGTCTGGTTCCATTGAG+GGG 0.552252 6_1:-70379 None:intergenic
GAATTTGATGAGGTTGGTGG+CGG 0.552269 6_1:+69433 Msa0867330:CDS
ACCAGCCAAGAAGAAACACC+GGG 0.560295 6_1:-67743 None:intergenic
ATTAACAGTCTTCATATCAA+GGG 0.560450 6_1:+67512 Msa0867330:CDS
TGAAGTTCCTTTCTTAGTAG+GGG 0.560456 6_1:+71776 Msa0867330:three_prime_UTR
CCAGAACGCACTCTTTCAAG+AGG 0.561497 6_1:-69571 None:intergenic
CTACCTCTACAAATGTATGT+AGG 0.562256 6_1:-68326 None:intergenic
AAGCAAAATGCTCATTTCAT+GGG 0.563579 6_1:-67444 None:intergenic
TCAGCTCCTGAGGTGAGAGT+TGG 0.566088 6_1:+67671 Msa0867330:CDS
AAGATGACTCAACAATAATG+TGG 0.566923 6_1:+68870 Msa0867330:CDS
GCAACTCCAACTCTCACCTC+AGG 0.567514 6_1:-67677 None:intergenic
ATATAGTACCTCTCCAGAGT+TGG 0.567676 6_1:-68978 None:intergenic
CATTAAATTGCAATATGGAA+AGG 0.567822 6_1:+69276 Msa0867330:CDS
AGAAGAAACACCGGGCCACT+CGG 0.570094 6_1:-67735 None:intergenic
CCTTGTAAGGCCAAGCTAGG+AGG 0.570679 6_1:-67185 None:intergenic
GTTCAGGCTCAGGAAATGGT+TGG 0.572394 6_1:+70062 Msa0867330:CDS
TAAAGTTTCTAGCTCACTCA+AGG 0.573973 6_1:-71301 None:intergenic
GAATGTCTTCTGCTTAAGGA+AGG 0.575240 6_1:-71429 None:intergenic
TCGTCGTCGCGGCTCCACCA+TGG 0.575472 6_1:-68136 None:intergenic
AAGCTTGCGAAGCCATTGAT+GGG 0.576225 6_1:+67473 Msa0867330:CDS
TCCTTCACATAAAGCATCAA+AGG 0.577767 6_1:-70423 None:intergenic
ATCCCTTGTAAGGCCAAGCT+AGG 0.578635 6_1:-67188 None:intergenic
ATTGAATTTGATGAGGTTGG+TGG 0.579817 6_1:+69430 Msa0867330:CDS
CATTCACCTATACTTGATGT+AGG 0.582110 6_1:-70462 None:intergenic
ACTGGGTTCAACTCCCAGAT+GGG 0.583518 6_1:+68383 Msa0867330:CDS
CTCCTAGCTTGGCCTTACAA+GGG 0.587231 6_1:+67186 Msa0867330:CDS
ACATGTACAAAATATGGCTG+AGG 0.592499 6_1:-71678 None:intergenic
CTGACTCCCACCGCTTCCAA+AGG 0.592548 6_1:-67699 None:intergenic
TTCGTTTGTATCAGCTCCTG+AGG 0.594024 6_1:+67661 Msa0867330:CDS
GACTGGGTTCAACTCCCAGA+TGG 0.594097 6_1:+68382 Msa0867330:CDS
AACTTGTTCTGATTGAAGGG+AGG 0.594772 6_1:+70089 Msa0867330:CDS
AATGTGAAGTGTGACTATCT+AGG 0.596257 6_1:+68480 Msa0867330:CDS
TCAAACGATTGAATTTGATG+AGG 0.602152 6_1:+69423 Msa0867330:CDS
TGGCCTTACAAGGGATGCGA+TGG 0.604038 6_1:+67195 Msa0867330:CDS
GAGTTGCCTTTGGAAGCGGT+GGG 0.609469 6_1:+67693 Msa0867330:CDS
GGGGATGCATAAGCAAAGGA+AGG 0.610855 6_1:+71795 Msa0867330:three_prime_UTR
TAGTATTGAAGAGGTTGCTG+TGG 0.612031 6_1:+65360 Msa0867330:CDS
AGATGACTCAACAATAATGT+GGG 0.612110 6_1:+68871 Msa0867330:CDS
GGGATGCGATGGTCAACTAT+CGG 0.613749 6_1:+67206 Msa0867330:CDS
AGGAGAACCGATGTCAGACT+GGG 0.619323 6_1:+68366 Msa0867330:CDS
CAACAAAATGGATCAACCAA+TGG 0.620358 6_1:+68273 Msa0867330:CDS
GGACACTTTGGTTAAAACCA+TGG 0.620664 6_1:+68119 Msa0867330:CDS
TGAGCATTGTAGTGAAAGAG+TGG 0.621454 6_1:+69083 Msa0867330:CDS
TCCATCATCAGGGAACTCTA+GGG 0.621732 6_1:-70397 None:intergenic
CCAACGCAAACTACTTGTAG+AGG 0.623092 6_1:+66441 Msa0867330:CDS
AGTAGGGGATGCATAAGCAA+AGG 0.623582 6_1:+71791 Msa0867330:three_prime_UTR
TTAAACGGTGCATCCCATCT+GGG 0.624676 6_1:-68396 None:intergenic
TCAAAGGACTTCCATCATCA+GGG 0.626540 6_1:-70407 None:intergenic
CTCCAATTGTAACTATAAAG+GGG 0.627731 6_1:-71472 None:intergenic
AAGGTTGCCTCCAAACCAGA+TGG 0.627979 6_1:+70500 Msa0867330:CDS
AATGTGTTGTAGAATATCAA+AGG 0.628027 6_1:+70481 Msa0867330:CDS
AGTGCACAAGTAAATTTGGA+AGG 0.630076 6_1:+69514 Msa0867330:CDS
AGTTGAACCCAGTCTGACAT+CGG 0.634963 6_1:-68373 None:intergenic
GCGAATCATATTGAATAACT+CGG 0.638317 6_1:+66483 Msa0867330:CDS
ATAAAAGTGGATGACCAAGA+AGG 0.639601 6_1:+69619 Msa0867330:CDS
ACTGGTTGATGGATCAGTCA+GGG 0.640664 6_1:+69537 Msa0867330:CDS
ATTTGTAGAGGTAGAAATCG+AGG 0.643602 6_1:+68335 Msa0867330:CDS
GGACCTACATACATTTGTAG+AGG 0.649209 6_1:+68323 Msa0867330:CDS
CTTGTTGCCGCCGATCTCAG+AGG 0.650591 6_1:+70115 Msa0867330:CDS
ACTTTAGAGGATACACAAGA+AGG 0.650634 6_1:+71318 Msa0867330:CDS
GGAAGACGTTCCTGACGACA+AGG 0.651394 6_1:+68302 Msa0867330:CDS
CACTTTGGTTAAAACCATGG+TGG 0.655161 6_1:+68122 Msa0867330:CDS
GGATGACCAAGAAGGATCAA+CGG 0.659729 6_1:+69627 Msa0867330:CDS
GGCAATAGGACCAGATTCCG+GGG 0.664051 6_1:+68892 Msa0867330:CDS
TGAGGGTGCCAACTCTGGAG+AGG 0.665513 6_1:+68970 Msa0867330:CDS
AAACTTCAAGAAAAGAACAA+AGG 0.670892 6_1:+70171 Msa0867330:CDS
CAATGTAAATAGGTTTACAC+AGG 0.671313 6_1:+71514 Msa0867330:three_prime_UTR
TAGAAATCGAGGAATTAACA+AGG 0.675835 6_1:+68346 Msa0867330:CDS
AAAACTAAAAGTATTTACTG+AGG 0.677275 6_1:+69465 Msa0867330:CDS
AAGGTTATCAGCTATAGTTG+AGG 0.679075 6_1:+66670 Msa0867330:CDS
CTTCTGCTTAAGGAAGGAGA+AGG 0.688266 6_1:-71423 None:intergenic
GTTCCTTCAAGGCATCTAGG+AGG 0.692362 6_1:+68250 Msa0867330:CDS
CTACAACAAACACAAGAGTG+AGG 0.697970 6_1:+64955 Msa0867330:five_prime_UTR
AGAGTGAAACATCGTCGTCG+CGG 0.704416 6_1:-68147 None:intergenic
AGTCACTTCCAGCTACCGAG+TGG 0.722155 6_1:+67720 Msa0867330:CDS
ACTTGTGCCTCTGAGATCGG+CGG 0.725503 6_1:-70122 None:intergenic
AAGTGCAAGAGGAACCCAAG+TGG 0.732154 6_1:-65482 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAATTTTTTTCTTGTTT+TGG - chr6_1:65253-65272 None:intergenic 10.0%
!! TTATCTAAATATGTTTAATT+TGG + chr6_1:65578-65597 Msa0867330:intron 10.0%
!!! TTTTACTTATTTGTTATTTT+TGG + chr6_1:66781-66800 Msa0867330:intron 10.0%
!! AAGTTTAATATTATATTTGT+AGG + chr6_1:67777-67796 Msa0867330:intron 10.0%
!!! ATTGATTCTTTTATTTATTT+AGG + chr6_1:69672-69691 Msa0867330:intron 10.0%
!! AATATAAATAGAAATATCTT+CGG - chr6_1:70685-70704 None:intergenic 10.0%
!!! ATGTTAATTTTCATTGAAAA+TGG - chr6_1:65189-65208 None:intergenic 15.0%
!!! TTTAGTTTTTTGATTGATTT+TGG + chr6_1:65287-65306 Msa0867330:five_prime_UTR 15.0%
!!! TTTTTGGATTTTTGTTAAAT+TGG + chr6_1:65653-65672 Msa0867330:intron 15.0%
!!! TTTTGGATTTTTGTTAAATT+GGG + chr6_1:65654-65673 Msa0867330:intron 15.0%
!! ATTATAACAAACTAACTTAT+TGG - chr6_1:70818-70837 None:intergenic 15.0%
!!! ATTTTCATTGAAAATGGTTT+TGG - chr6_1:65183-65202 None:intergenic 20.0%
!! AAAAATGAGTAGAAAGAAAA+GGG + chr6_1:65324-65343 Msa0867330:exon 20.0%
!! AATGATTGATTAATAGAGTA+AGG - chr6_1:65546-65565 None:intergenic 20.0%
!!! TAAAATGCATTCATTGTTTT+TGG + chr6_1:65637-65656 Msa0867330:intron 20.0%
!!! TTTGGATTTTTGTTAAATTG+GGG + chr6_1:65655-65674 Msa0867330:intron 20.0%
!!! CATGAAATTTATTTTCTTTG+AGG + chr6_1:65684-65703 Msa0867330:intron 20.0%
!!! TTTTGCAATAATGTCAATAT+AGG - chr6_1:65754-65773 None:intergenic 20.0%
!! CTAACAAATTACATATACAA+TGG - chr6_1:66029-66048 None:intergenic 20.0%
!! AGAAATAAGTGTTTAATTGA+AGG + chr6_1:66130-66149 Msa0867330:intron 20.0%
!!! TGTTGTTTAATTTTCAGTAT+GGG + chr6_1:66413-66432 Msa0867330:intron 20.0%
!! AAAACTACAAGTAAAAACTA+GGG - chr6_1:66715-66734 None:intergenic 20.0%
!! AAAAACTACAAGTAAAAACT+AGG - chr6_1:66716-66735 None:intergenic 20.0%
!!! ATTTGTTATTTTTGGAATCA+TGG + chr6_1:66789-66808 Msa0867330:intron 20.0%
!! ATAATTTCATTTATCGAGTT+AGG + chr6_1:67952-67971 Msa0867330:intron 20.0%
!!! TTTTAGCCAATAAACTTTAT+AGG + chr6_1:68226-68245 Msa0867330:CDS 20.0%
!! CTTATCATAGTATAAAAACA+AGG - chr6_1:68814-68833 None:intergenic 20.0%
!!! AGTTATTTTAAGTTTCTTTC+CGG - chr6_1:69197-69216 None:intergenic 20.0%
!!! AAAACTAAAAGTATTTACTG+AGG + chr6_1:69465-69484 Msa0867330:CDS 20.0%
!!! AATAAGTTGAAAACAACTTA+TGG + chr6_1:69834-69853 Msa0867330:intron 20.0%
!! TCTATCATAGTATCTAAATT+TGG - chr6_1:70208-70227 None:intergenic 20.0%
!!! ATGTGATCTTCATTATTTTT+AGG + chr6_1:70774-70793 Msa0867330:intron 20.0%
!! TCCAATAAAAATCACTTATA+TGG - chr6_1:71043-71062 None:intergenic 20.0%
!! TTAGAATAAAATATCTCGAA+GGG + chr6_1:71123-71142 Msa0867330:intron 20.0%
!! TAAGAAACATGTACAAAATA+TGG - chr6_1:71687-71706 None:intergenic 20.0%
! ACAAATGTTTGCATCAATTA+AGG + chr6_1:65044-65063 Msa0867330:five_prime_UTR 25.0%
! CAAAAATGAGTAGAAAGAAA+AGG + chr6_1:65323-65342 Msa0867330:exon 25.0%
! AAAACAACTGGAATGAAAAA+TGG - chr6_1:65424-65443 None:intergenic 25.0%
!! ACGAATCTGATTAACATTTT+GGG - chr6_1:65790-65809 None:intergenic 25.0%
!! TGAAACTATTGACTAATGTT+AGG + chr6_1:65931-65950 Msa0867330:intron 25.0%
!! GAAACTATTGACTAATGTTA+GGG + chr6_1:65932-65951 Msa0867330:intron 25.0%
! GGAAAAGTAAAAATCCAATT+TGG - chr6_1:66008-66027 None:intergenic 25.0%
! TAAATAAGAGTTCCAAAATC+AGG - chr6_1:66102-66121 None:intergenic 25.0%
!! TAAACACTTATTTCTCCAAT+TGG - chr6_1:66125-66144 None:intergenic 25.0%
! CATATATAACAAAACTCCAA+AGG - chr6_1:66219-66238 None:intergenic 25.0%
!!! CTGTTGTTTAATTTTCAGTA+TGG + chr6_1:66412-66431 Msa0867330:intron 25.0%
! CAACTTCATATAAAGAACAT+TGG - chr6_1:66541-66560 None:intergenic 25.0%
! ATAAATTGTTGACAGAAATC+TGG + chr6_1:66618-66637 Msa0867330:CDS 25.0%
! ACAAGATTCGTTTCAAAATT+CGG - chr6_1:66858-66877 None:intergenic 25.0%
!! GTTTTACTTACAAGAAATCT+TGG - chr6_1:67014-67033 None:intergenic 25.0%
! TATTAACAGTCTTCATATCA+AGG + chr6_1:67511-67530 Msa0867330:CDS 25.0%
! ATTAACAGTCTTCATATCAA+GGG + chr6_1:67512-67531 Msa0867330:CDS 25.0%
!! TATGTAGGAAAAACTTTTCA+CGG + chr6_1:68098-68117 Msa0867330:intron 25.0%
! TCATGCAAAACCATATTAAA+CGG - chr6_1:68414-68433 None:intergenic 25.0%
! CTCAAAAGTAGAATATCAAA+AGG - chr6_1:68528-68547 None:intergenic 25.0%
!! AATTGATATTCTTTTGTTGC+TGG - chr6_1:68551-68570 None:intergenic 25.0%
! TCAAATATTCAGTTAAGAAC+CGG + chr6_1:69175-69194 Msa0867330:CDS 25.0%
! CTTAAAATAACTGTTGTAGA+AGG + chr6_1:69205-69224 Msa0867330:CDS 25.0%
! CCATATTGCAATTTAATGTA+TGG - chr6_1:69274-69293 None:intergenic 25.0%
! CCATACATTAAATTGCAATA+TGG + chr6_1:69271-69290 Msa0867330:CDS 25.0%
! CATTAAATTGCAATATGGAA+AGG + chr6_1:69276-69295 Msa0867330:CDS 25.0%
! TAAAATAGAAGCCATAAAAG+TGG + chr6_1:69606-69625 Msa0867330:CDS 25.0%
! TCATATAAGTGCTTATGAAT+AGG + chr6_1:69743-69762 Msa0867330:intron 25.0%
! GATGAAAAAAATGATGCAAA+AGG + chr6_1:69932-69951 Msa0867330:intron 25.0%
!!! ATCACTTTTACTTACTCTTA+TGG + chr6_1:69981-70000 Msa0867330:intron 25.0%
! AAACTTCAAGAAAAGAACAA+AGG + chr6_1:70171-70190 Msa0867330:CDS 25.0%
! AATGTGTTGTAGAATATCAA+AGG + chr6_1:70481-70500 Msa0867330:CDS 25.0%
!! GCCATATAAGTGATTTTTAT+TGG + chr6_1:71039-71058 Msa0867330:intron 25.0%
!! GAATTTGTAAAAAAGTACAG+TGG + chr6_1:71061-71080 Msa0867330:intron 25.0%
! GTTAGAATAAAATATCTCGA+AGG + chr6_1:71122-71141 Msa0867330:intron 25.0%
! ACTCCAATTGTAACTATAAA+GGG - chr6_1:71476-71495 None:intergenic 25.0%
! AACTCCAATTGTAACTATAA+AGG - chr6_1:71477-71496 None:intergenic 25.0%
!!! GTTTTAAGAAACAATATTCG+AGG - chr6_1:71565-71584 None:intergenic 25.0%
!!! GTTTAATAGTTTTACACAGA+CGG - chr6_1:71649-71668 None:intergenic 25.0%
ACAACAGTTGAATTGAAAAG+TGG - chr6_1:65003-65022 None:intergenic 30.0%
! TGGAGTTGACAAATTTTGAA+GGG - chr6_1:65163-65182 None:intergenic 30.0%
! TTGGAGTTGACAAATTTTGA+AGG - chr6_1:65164-65183 None:intergenic 30.0%
! TTCGATTGATAGTATTGAAG+AGG + chr6_1:65351-65370 Msa0867330:CDS 30.0%
! TTTCTTCAACTATGTTTTGC+AGG + chr6_1:65384-65403 Msa0867330:CDS 30.0%
GGAATGAAAAATGGAATCTT+TGG - chr6_1:65415-65434 None:intergenic 30.0%
! TAATTTGGTGAGAATTGTCT+TGG + chr6_1:65593-65612 Msa0867330:intron 30.0%
! CTTTGAGGAAATACTCAATT+TGG + chr6_1:65699-65718 Msa0867330:intron 30.0%
! GACGAATCTGATTAACATTT+TGG - chr6_1:65791-65810 None:intergenic 30.0%
ATGTACTACTGACATTAAGT+TGG + chr6_1:65891-65910 Msa0867330:intron 30.0%
! TGGAACTCTTATTTACCAAT+TGG + chr6_1:66107-66126 Msa0867330:intron 30.0%
!! GCTGGTGCTATATATATATA+AGG + chr6_1:66374-66393 Msa0867330:intron 30.0%
GCGAATCATATTGAATAACT+CGG + chr6_1:66483-66502 Msa0867330:CDS 30.0%
GGCAATTTCATAGGAAAAAT+AGG - chr6_1:66520-66539 None:intergenic 30.0%
AAGAACATTGGCAATTTCAT+AGG - chr6_1:66529-66548 None:intergenic 30.0%
AGCTTGGGATTAAAATAGTT+GGG - chr6_1:66644-66663 None:intergenic 30.0%
AAGCTTGGGATTAAAATAGT+TGG - chr6_1:66645-66664 None:intergenic 30.0%
AGTAAAAACTAGGGAAAAGA+CGG - chr6_1:66706-66725 None:intergenic 30.0%
AGAGTACATTGAATAGAATG+TGG - chr6_1:66924-66943 None:intergenic 30.0%
TTACAAGAAATCTTGGTTTC+CGG - chr6_1:67007-67026 None:intergenic 30.0%
CAGTTTGAACATTTCATAGA+TGG + chr6_1:67074-67093 Msa0867330:intron 30.0%
TTTGAACATTTCATAGATGG+TGG + chr6_1:67077-67096 Msa0867330:intron 30.0%
TCACGTAATCTATACTTTCT+AGG + chr6_1:67311-67330 Msa0867330:intron 30.0%
CACGTAATCTATACTTTCTA+GGG + chr6_1:67312-67331 Msa0867330:intron 30.0%
! TCTATACTTTCTAGGGATAT+TGG + chr6_1:67319-67338 Msa0867330:intron 30.0%
AAGCAAAATGCTCATTTCAT+GGG - chr6_1:67447-67466 None:intergenic 30.0%
!!! ATCTTTACACCGATTTTAGA+TGG + chr6_1:67623-67642 Msa0867330:CDS 30.0%
GTAAAAGAATGAGGTAGTTT+AGG - chr6_1:67832-67851 None:intergenic 30.0%
! CTACCTCATTCTTTTACTTA+TGG + chr6_1:67835-67854 Msa0867330:intron 30.0%
ACTCCATAAGTAAAAGAATG+AGG - chr6_1:67841-67860 None:intergenic 30.0%
! AGCTGATTCTAATGATTCAA+TGG + chr6_1:67929-67948 Msa0867330:intron 30.0%
!!! TTCTACTTTTTCTGCTATGT+AGG + chr6_1:68083-68102 Msa0867330:intron 30.0%
! TTTTTCCTTAAATCAACAGC+AGG - chr6_1:68174-68193 None:intergenic 30.0%
!! TGCTGTTGATTTAAGGAAAA+AGG + chr6_1:68173-68192 Msa0867330:CDS 30.0%
!! TGTTGATTTAAGGAAAAAGG+CGG + chr6_1:68176-68195 Msa0867330:CDS 30.0%
GGAACTCCTATAAAGTTTAT+TGG - chr6_1:68235-68254 None:intergenic 30.0%
TAGAAATCGAGGAATTAACA+AGG + chr6_1:68346-68365 Msa0867330:CDS 30.0%
!! ATGGTTTTGCATGATAATAC+AGG + chr6_1:68420-68439 Msa0867330:CDS 30.0%
TCTAGGAAGTTGTGAAATTA+AGG + chr6_1:68497-68516 Msa0867330:CDS 30.0%
TCTATAACACTATAGCATAG+CGG - chr6_1:68716-68735 None:intergenic 30.0%
AAGATGACTCAACAATAATG+TGG + chr6_1:68870-68889 Msa0867330:CDS 30.0%
AGATGACTCAACAATAATGT+GGG + chr6_1:68871-68890 Msa0867330:CDS 30.0%
TTGTGGAGATGAAATTGAAA+TGG + chr6_1:68937-68956 Msa0867330:CDS 30.0%
!!! CCAATTTTTTCTTCACTCAA+AGG - chr6_1:69008-69027 None:intergenic 30.0%
CCTTTGAGTGAAGAAAAAAT+TGG + chr6_1:69005-69024 Msa0867330:intron 30.0%
GAGTGAAGAAAAAATTGGTA+TGG + chr6_1:69010-69029 Msa0867330:intron 30.0%
AACTGTAATATGAAGAGAAG+AGG - chr6_1:69058-69077 None:intergenic 30.0%
TCTCTTCATATTACAGTTGA+AGG + chr6_1:69060-69079 Msa0867330:intron 30.0%
AATAACTGTTGTAGAAGGAA+AGG + chr6_1:69210-69229 Msa0867330:CDS 30.0%
! CTGTTCTTCATAATCTTTTC+AGG + chr6_1:69354-69373 Msa0867330:intron 30.0%
TCAAACGATTGAATTTGATG+AGG + chr6_1:69423-69442 Msa0867330:CDS 30.0%
! GTATTTACTGAGGAACTTTT+CGG + chr6_1:69475-69494 Msa0867330:CDS 30.0%
TTATTTATTTAGGCCCTGTT+TGG + chr6_1:69682-69701 Msa0867330:intron 30.0%
ATAAGCTGTTTATCCAAACA+GGG - chr6_1:69698-69717 None:intergenic 30.0%
AATAAGCTGTTTATCCAAAC+AGG - chr6_1:69699-69718 None:intergenic 30.0%
ACTTATTTCCAAAAGCTCTT+CGG - chr6_1:69821-69840 None:intergenic 30.0%
! ATAGAACTTGTTCTGATTGA+AGG + chr6_1:70085-70104 Msa0867330:CDS 30.0%
! TAGAACTTGTTCTGATTGAA+GGG + chr6_1:70086-70105 Msa0867330:CDS 30.0%
TTCAAGAAAAGAACAAAGGT+TGG + chr6_1:70175-70194 Msa0867330:intron 30.0%
TTACTACCTACATCAAGTAT+AGG + chr6_1:70456-70475 Msa0867330:CDS 30.0%
TGGTGTAATTTACTCAAAGA+AGG - chr6_1:70630-70649 None:intergenic 30.0%
AGAAATATCTTCGGACATTA+AGG - chr6_1:70676-70695 None:intergenic 30.0%
! TGTGTTGTTATTCAGTTCAA+AGG + chr6_1:70706-70725 Msa0867330:intron 30.0%
! TTCTTTTTCTTTTCCTAGCT+AGG + chr6_1:70854-70873 Msa0867330:intron 30.0%
AAAATCACTTATATGGCTAC+TGG - chr6_1:71036-71055 None:intergenic 30.0%
! GTAAAAAAGTACAGTGGTAT+TGG + chr6_1:71067-71086 Msa0867330:intron 30.0%
AACAGATGATGATCAAGTTT+AGG + chr6_1:71238-71257 Msa0867330:CDS 30.0%
GAGAAGAATTAATGATCTCT+TGG - chr6_1:71404-71423 None:intergenic 30.0%
CTCCAATTGTAACTATAAAG+GGG - chr6_1:71475-71494 None:intergenic 30.0%
! TATGCATCGACAATGTAAAT+AGG + chr6_1:71504-71523 Msa0867330:three_prime_UTR 30.0%
CAATGTAAATAGGTTTACAC+AGG + chr6_1:71514-71533 Msa0867330:three_prime_UTR 30.0%
ATGACTAAACTGTGACAAAA+TGG + chr6_1:71585-71604 Msa0867330:three_prime_UTR 30.0%
CATGTACAAGCTATAAGTTA+TGG - chr6_1:71730-71749 None:intergenic 30.0%
! CATAACTTATAGCTTGTACA+TGG + chr6_1:71728-71747 Msa0867330:three_prime_UTR 30.0%
! CAAATGTTTTATACTTGCAC+AGG + chr6_1:71820-71839 Msa0867330:three_prime_UTR 30.0%
AGGGTTGTTACTAGAAAACT+TGG - chr6_1:65144-65163 None:intergenic 35.0%
CCAAGGTCAATTACTCAAAA+GGG - chr6_1:65214-65233 None:intergenic 35.0%
ACCAAGGTCAATTACTCAAA+AGG - chr6_1:65215-65234 None:intergenic 35.0%
!!! GAAGTTTTGATTGAAGACCA+AGG - chr6_1:65231-65250 None:intergenic 35.0%
!!! TTCCAGTTGTTTTGATTGCT+TGG + chr6_1:65431-65450 Msa0867330:CDS 35.0%
!!! TCCAGTTGTTTTGATTGCTT+GGG + chr6_1:65432-65451 Msa0867330:CDS 35.0%
! TTGCTTGGGTTGTTGAAAAA+TGG + chr6_1:65446-65465 Msa0867330:CDS 35.0%
! TGCTTGGGTTGTTGAAAAAT+GGG + chr6_1:65447-65466 Msa0867330:CDS 35.0%
! GGTCTTTTCTTTTTCCACTT+GGG + chr6_1:65468-65487 Msa0867330:CDS 35.0%
AATTTGGTCACTGAAGTTGT+AGG + chr6_1:65715-65734 Msa0867330:intron 35.0%
TGTTAATCAGATTCGTCGAT+CGG + chr6_1:65794-65813 Msa0867330:intron 35.0%
TGCAATTTCAGTGACCAAAT+TGG + chr6_1:65991-66010 Msa0867330:intron 35.0%
! CAATTGTAGTGACCTGATTT+TGG + chr6_1:66087-66106 Msa0867330:intron 35.0%
! TCCAAAGGTACATAGGAATA+GGG - chr6_1:66204-66223 None:intergenic 35.0%
! ACAAAACTCCAAAGGTACAT+AGG - chr6_1:66211-66230 None:intergenic 35.0%
CGGGTGATAATTTAAGAACA+TGG + chr6_1:66290-66309 Msa0867330:intron 35.0%
! ATTTCAAATCAAAGGTGTGC+CGG - chr6_1:66354-66373 None:intergenic 35.0%
!! ACACCTTTGATTTGAAATGC+TGG + chr6_1:66356-66375 Msa0867330:intron 35.0%
TAGAGGACTTGGATAAGAAA+TGG + chr6_1:66458-66477 Msa0867330:CDS 35.0%
TTAATCCCAAGCTTTCTTCA+AGG + chr6_1:66651-66670 Msa0867330:CDS 35.0%
GATAACCTTGAAGAAAGCTT+GGG - chr6_1:66659-66678 None:intergenic 35.0%
TGATAACCTTGAAGAAAGCT+TGG - chr6_1:66660-66679 None:intergenic 35.0%
AAGGTTATCAGCTATAGTTG+AGG + chr6_1:66670-66689 Msa0867330:CDS 35.0%
! TCTTTTCTTTTTGCGTTTCC+AGG + chr6_1:66968-66987 Msa0867330:intron 35.0%
!! TTCATAGATGGTGGAATGTT+TGG + chr6_1:67086-67105 Msa0867330:intron 35.0%
!!! TCATGCAACTTGGTTTTGAT+TGG + chr6_1:67417-67436 Msa0867330:CDS 35.0%
!!! CATGCAACTTGGTTTTGATT+GGG + chr6_1:67418-67437 Msa0867330:CDS 35.0%
GAAGCAAAATGCTCATTTCA+TGG - chr6_1:67448-67467 None:intergenic 35.0%
! AGTGCTCTTCCATCTAAAAT+CGG - chr6_1:67635-67654 None:intergenic 35.0%
GCCTTATAAGTTCATTGTCT+TGG + chr6_1:68011-68030 Msa0867330:intron 35.0%
GCCAAGACAATGAACTTATA+AGG - chr6_1:68015-68034 None:intergenic 35.0%
! AAAACTTTTCACGGACACTT+TGG + chr6_1:68107-68126 Msa0867330:CDS 35.0%
ACTTTATAGGAGTTCCTTCA+AGG + chr6_1:68239-68258 Msa0867330:CDS 35.0%
CAACAAAATGGATCAACCAA+TGG + chr6_1:68273-68292 Msa0867330:CDS 35.0%
CTACCTCTACAAATGTATGT+AGG - chr6_1:68329-68348 None:intergenic 35.0%
ATTTGTAGAGGTAGAAATCG+AGG + chr6_1:68335-68354 Msa0867330:CDS 35.0%
TAGTCACACTTCACATTGTT+GGG - chr6_1:68477-68496 None:intergenic 35.0%
ATAGTCACACTTCACATTGT+TGG - chr6_1:68478-68497 None:intergenic 35.0%
AATGTGAAGTGTGACTATCT+AGG + chr6_1:68480-68499 Msa0867330:CDS 35.0%
TCACAAATCGCAGAAAATAG+CGG + chr6_1:68606-68625 Msa0867330:intron 35.0%
!!! TCCAGATTTTATTTTCAGCG+AGG + chr6_1:68785-68804 Msa0867330:intron 35.0%
TCCTCGCTGAAAATAAAATC+TGG - chr6_1:68789-68808 None:intergenic 35.0%
TCAACAATAATGTGGGCAAT+AGG + chr6_1:68878-68897 Msa0867330:CDS 35.0%
! AAAGAGTGGCAATTTTCTGA+TGG + chr6_1:69097-69116 Msa0867330:CDS 35.0%
GTTTGATTCCAAACAGGATT+TGG - chr6_1:69409-69428 None:intergenic 35.0%
TCAATCGTTTGATTCCAAAC+AGG - chr6_1:69415-69434 None:intergenic 35.0%
ACGATTGAATTTGATGAGGT+TGG + chr6_1:69427-69446 Msa0867330:CDS 35.0%
ATTGAATTTGATGAGGTTGG+TGG + chr6_1:69430-69449 Msa0867330:CDS 35.0%
! CTTTTCGGAGATGAAAACAT+TGG + chr6_1:69490-69509 Msa0867330:CDS 35.0%
! TGGTAGTGCACAAGTAAATT+TGG + chr6_1:69510-69529 Msa0867330:CDS 35.0%
AGTGCACAAGTAAATTTGGA+AGG + chr6_1:69514-69533 Msa0867330:CDS 35.0%
ACAAGTAAATTTGGAAGGAC+TGG + chr6_1:69519-69538 Msa0867330:CDS 35.0%
!! TTCTTGGTCATCCACTTTTA+TGG - chr6_1:69620-69639 None:intergenic 35.0%
ATAAAAGTGGATGACCAAGA+AGG + chr6_1:69619-69638 Msa0867330:CDS 35.0%
CTTATTTCCAAAAGCTCTTC+GGG - chr6_1:69820-69839 None:intergenic 35.0%
CACAAGTGATCCATATGTTA+GGG + chr6_1:70138-70157 Msa0867330:CDS 35.0%
ATACTAGCTGTGGCATTATT+TGG + chr6_1:70334-70353 Msa0867330:intron 35.0%
TCCTTTGATGCTTTATGTGA+AGG + chr6_1:70422-70441 Msa0867330:CDS 35.0%
! TCCTTCACATAAAGCATCAA+AGG - chr6_1:70426-70445 None:intergenic 35.0%
ATGTAGGTAGTAACGCATTA+TGG - chr6_1:70449-70468 None:intergenic 35.0%
CATTCACCTATACTTGATGT+AGG - chr6_1:70465-70484 None:intergenic 35.0%
ACATTAAGGAAAATCTCACC+TGG - chr6_1:70662-70681 None:intergenic 35.0%
AAACTAACTTATTGGACTGC+AGG - chr6_1:70810-70829 None:intergenic 35.0%
TCATTACAAAAACGTTTGCG+TGG + chr6_1:70925-70944 Msa0867330:intron 35.0%
AGCACAACATGAAAACGATA+GGG - chr6_1:71176-71195 None:intergenic 35.0%
TTTAGGTCTCAAATCGAAGA+TGG + chr6_1:71255-71274 Msa0867330:CDS 35.0%
ATCGAAGATGGAAATCTTGA+AGG + chr6_1:71267-71286 Msa0867330:CDS 35.0%
!! TAAAGTTTCTAGCTCACTCA+AGG - chr6_1:71304-71323 None:intergenic 35.0%
! ACTTTAGAGGATACACAAGA+AGG + chr6_1:71318-71337 Msa0867330:CDS 35.0%
TTCAGAATGTCTTCTGCTTA+AGG - chr6_1:71436-71455 None:intergenic 35.0%
GACCCCTTTATAGTTACAAT+TGG + chr6_1:71470-71489 Msa0867330:three_prime_UTR 35.0%
ACATGTACAAAATATGGCTG+AGG - chr6_1:71681-71700 None:intergenic 35.0%
AGTGAAGTTCCTTTCTTAGT+AGG + chr6_1:71774-71793 Msa0867330:three_prime_UTR 35.0%
GTGAAGTTCCTTTCTTAGTA+GGG + chr6_1:71775-71794 Msa0867330:three_prime_UTR 35.0%
TGAAGTTCCTTTCTTAGTAG+GGG + chr6_1:71776-71795 Msa0867330:three_prime_UTR 35.0%
!! CTCACTCTTGTGTTTGTTGT+AGG - chr6_1:64957-64976 None:intergenic 40.0%
CTACAACAAACACAAGAGTG+AGG + chr6_1:64955-64974 Msa0867330:five_prime_UTR 40.0%
!! CCCTTTTGAGTAATTGACCT+TGG + chr6_1:65211-65230 Msa0867330:five_prime_UTR 40.0%
! TAGTATTGAAGAGGTTGCTG+TGG + chr6_1:65360-65379 Msa0867330:CDS 40.0%
ACCCAAGCAATCAAAACAAC+TGG - chr6_1:65436-65455 None:intergenic 40.0%
! GGGTCTTTTCTTTTTCCACT+TGG + chr6_1:65467-65486 Msa0867330:CDS 40.0%
TTGGTGAGAATTGTCTTGGT+TGG + chr6_1:65597-65616 Msa0867330:intron 40.0%
TATGAAGTACGGACACTCTT+CGG + chr6_1:65818-65837 Msa0867330:intron 40.0%
TAGTACATGATGCACGGATA+CGG - chr6_1:65879-65898 None:intergenic 40.0%
TGTCAGTAGTACATGATGCA+CGG - chr6_1:65885-65904 None:intergenic 40.0%
GGTGAAAAAAACTAAGACCG+AGG + chr6_1:66151-66170 Msa0867330:intron 40.0%
CAAATGCCACAAAACAACCT+CGG - chr6_1:66171-66190 None:intergenic 40.0%
TCCCTATTCCTATGTACCTT+TGG + chr6_1:66200-66219 Msa0867330:intron 40.0%
! CTCCAAAGGTACATAGGAAT+AGG - chr6_1:66205-66224 None:intergenic 40.0%
GCACCAGCATTTCAAATCAA+AGG - chr6_1:66362-66381 None:intergenic 40.0%
CAAACTACTTGTAGAGGACT+TGG + chr6_1:66447-66466 Msa0867330:CDS 40.0%
GCATCAAGTCTTCTGATTCA+TGG - chr6_1:66902-66921 None:intergenic 40.0%
! CTAGAGCAATCCTTTTGTGT+AGG + chr6_1:67124-67143 Msa0867330:intron 40.0%
TCAACTCGTTCCTACACAAA+AGG - chr6_1:67137-67156 None:intergenic 40.0%
! TACTTTCTAGGGATATTGGC+AGG + chr6_1:67323-67342 Msa0867330:intron 40.0%
! ACTTTCTAGGGATATTGGCA+GGG + chr6_1:67324-67343 Msa0867330:intron 40.0%
GGACACTTTGGTTAAAACCA+TGG + chr6_1:68119-68138 Msa0867330:CDS 40.0%
CACTTTGGTTAAAACCATGG+TGG + chr6_1:68122-68141 Msa0867330:CDS 40.0%
GATTTAAGGAAAAAGGCGGT+TGG + chr6_1:68180-68199 Msa0867330:CDS 40.0%
TGGATCAACCAATGGTTCTT+CGG + chr6_1:68281-68300 Msa0867330:CDS 40.0%
GGACCTACATACATTTGTAG+AGG + chr6_1:68323-68342 Msa0867330:CDS 40.0%
ATGGGATGCACCGTTTAATA+TGG + chr6_1:68401-68420 Msa0867330:CDS 40.0%
AATCGCAGAAAATAGCGGTT+TGG + chr6_1:68611-68630 Msa0867330:intron 40.0%
TGACAACACTGTCTTCATTC+AGG + chr6_1:68754-68773 Msa0867330:intron 40.0%
TGAAATGGTTGTCCCATTTG+AGG + chr6_1:68952-68971 Msa0867330:CDS 40.0%
GAAATGGTTGTCCCATTTGA+GGG + chr6_1:68953-68972 Msa0867330:CDS 40.0%
ATATAGTACCTCTCCAGAGT+TGG - chr6_1:68981-69000 None:intergenic 40.0%
! TGAGCATTGTAGTGAAAGAG+TGG + chr6_1:69083-69102 Msa0867330:CDS 40.0%
AACTCTCAGCAGTCACTTAA+CGG + chr6_1:69148-69167 Msa0867330:CDS 40.0%
GCAGCTGCAAAAGAAAAATC+TGG + chr6_1:69238-69257 Msa0867330:CDS 40.0%
! TGGAAAGGTATGTAACACTC+TGG + chr6_1:69291-69310 Msa0867330:intron 40.0%
CTCATACTCCAAATCCTGTT+TGG + chr6_1:69398-69417 Msa0867330:CDS 40.0%
!! AATTTGGAAGGACTGGTTGA+TGG + chr6_1:69526-69545 Msa0867330:CDS 40.0%
! TAAGCACCTTGAGACTGTTT+TGG - chr6_1:69889-69908 None:intergenic 40.0%
TCACTTCTTCGATAATGACC+AGG + chr6_1:70039-70058 Msa0867330:intron 40.0%
CACTTCTTCGATAATGACCA+GGG + chr6_1:70040-70059 Msa0867330:intron 40.0%
! AACTTGTTCTGATTGAAGGG+AGG + chr6_1:70089-70108 Msa0867330:CDS 40.0%
ACTTGTTCTGATTGAAGGGA+GGG + chr6_1:70090-70109 Msa0867330:CDS 40.0%
GCACAAGTGATCCATATGTT+AGG + chr6_1:70137-70156 Msa0867330:CDS 40.0%
CCATAGTGTACCCTAACATA+TGG - chr6_1:70151-70170 None:intergenic 40.0%
CCATATGTTAGGGTACACTA+TGG + chr6_1:70148-70167 Msa0867330:CDS 40.0%
GACTTTACGAGTCAAGTGTA+TGG + chr6_1:70264-70283 Msa0867330:intron 40.0%
CGAGAATCTATGAAAACTCC+TGG - chr6_1:70295-70314 None:intergenic 40.0%
GATTCTCGAGTTCAATAACC+TGG + chr6_1:70307-70326 Msa0867330:intron 40.0%
ACAAAACTCTAACCCCTCAA+TGG + chr6_1:70367-70386 Msa0867330:CDS 40.0%
TCAAAGGACTTCCATCATCA+GGG - chr6_1:70410-70429 None:intergenic 40.0%
ATCAAAGGACTTCCATCATC+AGG - chr6_1:70411-70430 None:intergenic 40.0%
GATAAGTGGATACCTCTTCA+AGG + chr6_1:70525-70544 Msa0867330:CDS 40.0%
ACCTCTTCAAGGTGTGAAAA+AGG + chr6_1:70536-70555 Msa0867330:CDS 40.0%
CCTCTTCAAGGTGTGAAAAA+GGG + chr6_1:70537-70556 Msa0867330:CDS 40.0%
AAGTTCCAGAAATGCAGAAG+AGG + chr6_1:70586-70605 Msa0867330:CDS 40.0%
AATGCAGAAGAGGCAAAGTA+TGG + chr6_1:70596-70615 Msa0867330:CDS 40.0%
ATTACACCAAATTCCTAGCC+AGG + chr6_1:70641-70660 Msa0867330:CDS 40.0%
AACAATGTGCACACATTTGG+AGG - chr6_1:70889-70908 None:intergenic 40.0%
CACAACAATGTGCACACATT+TGG - chr6_1:70892-70911 None:intergenic 40.0%
TGGAAGTTACTGGTATGTCA+CGG + chr6_1:70945-70964 Msa0867330:intron 40.0%
TTACTGGTATGTCACGGATT+AGG + chr6_1:70951-70970 Msa0867330:intron 40.0%
! TATATGGCTACTGGTCTGAT+GGG - chr6_1:71027-71046 None:intergenic 40.0%
! TTATATGGCTACTGGTCTGA+TGG - chr6_1:71028-71047 None:intergenic 40.0%
CAGCACAACATGAAAACGAT+AGG - chr6_1:71177-71196 None:intergenic 40.0%
GAGTGAGCTAGAAACTTTAG+AGG + chr6_1:71305-71324 Msa0867330:CDS 40.0%
GCTTCTTCTCAGCAAGATAA+AGG + chr6_1:71371-71390 Msa0867330:CDS 40.0%
CTCAGCAAGATAAAGGAACT+TGG + chr6_1:71378-71397 Msa0867330:CDS 40.0%
GAATGTCTTCTGCTTAAGGA+AGG - chr6_1:71432-71451 None:intergenic 40.0%
TTTACACAGACGGTGTAAAC+AGG - chr6_1:71639-71658 None:intergenic 40.0%
TATGCATCCCCTACTAAGAA+AGG - chr6_1:71786-71805 None:intergenic 40.0%
!! TTCCTCTTGCACTTGCTGTT+TGG + chr6_1:65491-65510 Msa0867330:CDS 45.0%
!! TCCTCTTGCACTTGCTGTTT+GGG + chr6_1:65492-65511 Msa0867330:CDS 45.0%
! TGCTGTTTGGGCTACTATAC+AGG + chr6_1:65504-65523 Msa0867330:CDS 45.0%
CGTCGATCGGTTATGAAGTA+CGG + chr6_1:65807-65826 Msa0867330:intron 45.0%
!! CTAAGACCGAGGTTGTTTTG+TGG + chr6_1:66162-66181 Msa0867330:intron 45.0%
ATGACCATACAACGAAGCAC+AGG + chr6_1:66265-66284 Msa0867330:intron 45.0%
! CCTCTACAAGTAGTTTGCGT+TGG - chr6_1:66444-66463 None:intergenic 45.0%
CCAACGCAAACTACTTGTAG+AGG + chr6_1:66441-66460 Msa0867330:CDS 45.0%
CATATAGCCCATCACACCAT+TGG + chr6_1:66577-66596 Msa0867330:intron 45.0%
! GAGCTGCAAGAGTTTTCACT+AGG + chr6_1:67155-67174 Msa0867330:CDS 45.0%
TTACAGCGAGTCATGCAACT+TGG + chr6_1:67407-67426 Msa0867330:intron 45.0%
TAAGCTTGCGAAGCCATTGA+TGG + chr6_1:67472-67491 Msa0867330:CDS 45.0%
AAGCTTGCGAAGCCATTGAT+GGG + chr6_1:67473-67492 Msa0867330:CDS 45.0%
ATTCGTGCAGTTCCCATCAA+TGG - chr6_1:67488-67507 None:intergenic 45.0%
TTCGTTTGTATCAGCTCCTG+AGG + chr6_1:67661-67680 Msa0867330:CDS 45.0%
!! CTCTGCCTGCTGTTGATTTA+AGG + chr6_1:68166-68185 Msa0867330:CDS 45.0%
TTAAGGAAAAAGGCGGTTGG+AGG + chr6_1:68183-68202 Msa0867330:CDS 45.0%
TAAGGAAAAAGGCGGTTGGA+GGG + chr6_1:68184-68203 Msa0867330:CDS 45.0%
GCATCTAGGAGGCAACAAAA+TGG + chr6_1:68261-68280 Msa0867330:CDS 45.0%
AACGTCTTCCGAAGAACCAT+TGG - chr6_1:68292-68311 None:intergenic 45.0%
AGTTGAACCCAGTCTGACAT+CGG - chr6_1:68376-68395 None:intergenic 45.0%
TTAAACGGTGCATCCCATCT+GGG - chr6_1:68399-68418 None:intergenic 45.0%
ATTAAACGGTGCATCCCATC+TGG - chr6_1:68400-68419 None:intergenic 45.0%
TTGATGTCTTTGTGCAGCTG+AGG + chr6_1:68840-68859 Msa0867330:intron 45.0%
! TTTGCTATAACCCCGGAATC+TGG - chr6_1:68905-68924 None:intergenic 45.0%
GTGACTGCTGAGAGTTGTTT+CGG - chr6_1:69144-69163 None:intergenic 45.0%
!! GAATTTGATGAGGTTGGTGG+CGG + chr6_1:69433-69452 Msa0867330:CDS 45.0%
!! ACTGGTTGATGGATCAGTCA+GGG + chr6_1:69537-69556 Msa0867330:CDS 45.0%
ATGGATCAGTCAGGGATGTA+TGG + chr6_1:69545-69564 Msa0867330:CDS 45.0%
GGATGACCAAGAAGGATCAA+CGG + chr6_1:69627-69646 Msa0867330:CDS 45.0%
AACACACCGTTGATCCTTCT+TGG - chr6_1:69636-69655 None:intergenic 45.0%
! AAGCTATCCCGAAGAGCTTT+TGG + chr6_1:69810-69829 Msa0867330:intron 45.0%
AGCTCTCCAAAACAGTCTCA+AGG + chr6_1:69880-69899 Msa0867330:intron 45.0%
TTCGATAATGACCAGGGTTC+AGG + chr6_1:70046-70065 Msa0867330:intron 45.0%
!! ATCACTTGTGCCTCTGAGAT+CGG - chr6_1:70128-70147 None:intergenic 45.0%
GTCAAGTGTATGGAGATTCC+AGG + chr6_1:70274-70293 Msa0867330:intron 45.0%
ACCTGGCTTAATACTAGCTG+TGG + chr6_1:70324-70343 Msa0867330:intron 45.0%
TAGCTGTGGCATTATTTGGC+AGG + chr6_1:70338-70357 Msa0867330:intron 45.0%
TCCATCATCAGGGAACTCTA+GGG - chr6_1:70400-70419 None:intergenic 45.0%
TTCCATCATCAGGGAACTCT+AGG - chr6_1:70401-70420 None:intergenic 45.0%
!! TTATCAGCCATCTGGTTTGG+AGG - chr6_1:70510-70529 None:intergenic 45.0%
CACTTATCAGCCATCTGGTT+TGG - chr6_1:70513-70532 None:intergenic 45.0%
CAAACCAGATGGCTGATAAG+TGG + chr6_1:70511-70530 Msa0867330:CDS 45.0%
GTATCCACTTATCAGCCATC+TGG - chr6_1:70518-70537 None:intergenic 45.0%
!! CCCTTTTTCACACCTTGAAG+AGG - chr6_1:70540-70559 None:intergenic 45.0%
CTTTGCCTCTTCTGCATTTC+TGG - chr6_1:70594-70613 None:intergenic 45.0%
ATCTCACCTGGCTAGGAATT+TGG - chr6_1:70650-70669 None:intergenic 45.0%
AAGGAAAATCTCACCTGGCT+AGG - chr6_1:70657-70676 None:intergenic 45.0%
GAGGCTAAAAAGACCTAGCT+AGG - chr6_1:70870-70889 None:intergenic 45.0%
AACGTTTGCGTGGAAGTTAC+TGG + chr6_1:70935-70954 Msa0867330:intron 45.0%
!! GTATTGGTGCGCACATTTTG+AGG + chr6_1:71083-71102 Msa0867330:intron 45.0%
CTTCTGCTTAAGGAAGGAGA+AGG - chr6_1:71426-71445 None:intergenic 45.0%
AGTAGGGGATGCATAAGCAA+AGG + chr6_1:71791-71810 Msa0867330:three_prime_UTR 45.0%
AAGTGCAAGAGGAACCCAAG+TGG - chr6_1:65485-65504 None:intergenic 50.0%
GTACGGACACTCTTCGGATT+AGG + chr6_1:65824-65843 Msa0867330:intron 50.0%
CATACAACGAAGCACAGGCA+CGG + chr6_1:66270-66289 Msa0867330:intron 50.0%
ATACAACGAAGCACAGGCAC+GGG + chr6_1:66271-66290 Msa0867330:intron 50.0%
GTGTTCAACACTGACACGTG+TGG - chr6_1:66332-66351 None:intergenic 50.0%
! CACGTGTCAGTGTTGAACAC+CGG + chr6_1:66332-66351 Msa0867330:intron 50.0%
CAGTGCTCCAATGGTGTGAT+GGG - chr6_1:66587-66606 None:intergenic 50.0%
ACAGTGCTCCAATGGTGTGA+TGG - chr6_1:66588-66607 None:intergenic 50.0%
!! CACCATTGGAGCACTGTGAA+TGG + chr6_1:66591-66610 Msa0867330:CDS 50.0%
AGCCATTCACAGTGCTCCAA+TGG - chr6_1:66596-66615 None:intergenic 50.0%
CTTGTAAGGCCAAGCTAGGA+GGG - chr6_1:67187-67206 None:intergenic 50.0%
!! CTCCTAGCTTGGCCTTACAA+GGG + chr6_1:67186-67205 Msa0867330:CDS 50.0%
ATCCCTTGTAAGGCCAAGCT+AGG - chr6_1:67191-67210 None:intergenic 50.0%
TGACCATCGCATCCCTTGTA+AGG - chr6_1:67201-67220 None:intergenic 50.0%
GGGATGCGATGGTCAACTAT+CGG + chr6_1:67206-67225 Msa0867330:CDS 50.0%
GTGAGAGTTGGAGTTGCCTT+TGG + chr6_1:67683-67702 Msa0867330:CDS 50.0%
! GTTGGAGTTGCCTTTGGAAG+CGG + chr6_1:67689-67708 Msa0867330:CDS 50.0%
ACCAGCCAAGAAGAAACACC+GGG - chr6_1:67746-67765 None:intergenic 50.0%
CACCAGCCAAGAAGAAACAC+CGG - chr6_1:67747-67766 None:intergenic 50.0%
AGAGTGAAACATCGTCGTCG+CGG - chr6_1:68150-68169 None:intergenic 50.0%
! GGAGTTCCTTCAAGGCATCT+AGG + chr6_1:68247-68266 Msa0867330:CDS 50.0%
! GTTCCTTCAAGGCATCTAGG+AGG + chr6_1:68250-68269 Msa0867330:CDS 50.0%
TTGCCTCCTAGATGCCTTGA+AGG - chr6_1:68256-68275 None:intergenic 50.0%
GTATGTAGGTCCTTGTCGTC+AGG - chr6_1:68315-68334 None:intergenic 50.0%
AAGGAGAACCGATGTCAGAC+TGG + chr6_1:68365-68384 Msa0867330:CDS 50.0%
AGGAGAACCGATGTCAGACT+GGG + chr6_1:68366-68385 Msa0867330:CDS 50.0%
ACTGGGTTCAACTCCCAGAT+GGG + chr6_1:68383-68402 Msa0867330:CDS 50.0%
GCTATATCACTGCTGCGTAG+CGG - chr6_1:68644-68663 None:intergenic 50.0%
TGGGCAATAGGACCAGATTC+CGG + chr6_1:68890-68909 Msa0867330:CDS 50.0%
CAGAGTTGGCACCCTCAAAT+GGG - chr6_1:68967-68986 None:intergenic 50.0%
!! GACTGGTTGATGGATCAGTC+AGG + chr6_1:69536-69555 Msa0867330:CDS 50.0%
CCAGAACGCACTCTTTCAAG+AGG - chr6_1:69574-69593 None:intergenic 50.0%
! CCTCTTGAAAGAGTGCGTTC+TGG + chr6_1:69571-69590 Msa0867330:CDS 50.0%
GTTCAGGCTCAGGAAATGGT+TGG + chr6_1:70062-70081 Msa0867330:CDS 50.0%
GCCACAGCTAGTATTAAGCC+AGG - chr6_1:70328-70347 None:intergenic 50.0%
! TAGGGTCTGGTTCCATTGAG+GGG - chr6_1:70382-70401 None:intergenic 50.0%
! CTAGGGTCTGGTTCCATTGA+GGG - chr6_1:70383-70402 None:intergenic 50.0%
! TCTAGGGTCTGGTTCCATTG+AGG - chr6_1:70384-70403 None:intergenic 50.0%
ACCCTAGAGTTCCCTGATGA+TGG + chr6_1:70396-70415 Msa0867330:CDS 50.0%
AAGGTTGCCTCCAAACCAGA+TGG + chr6_1:70500-70519 Msa0867330:CDS 50.0%
! CGGATTAGGCATTGCTGATG+TGG + chr6_1:70965-70984 Msa0867330:intron 50.0%
GGGGATGCATAAGCAAAGGA+AGG + chr6_1:71795-71814 Msa0867330:three_prime_UTR 50.0%
GCCCAAACAGCAAGTGCAAG+AGG - chr6_1:65496-65515 None:intergenic 55.0%
! TCTTCGGATTAGGCGTGTCC+CGG + chr6_1:65834-65853 Msa0867330:intron 55.0%
CGTGCCTGTGCTTCGTTGTA+TGG - chr6_1:66272-66291 None:intergenic 55.0%
! TCCAGGCACGTTTGAAGCTC+CGG + chr6_1:66985-67004 Msa0867330:intron 55.0%
AGGATCATGCCCTCCTAGCT+TGG + chr6_1:67175-67194 Msa0867330:CDS 55.0%
CCTTGTAAGGCCAAGCTAGG+AGG - chr6_1:67188-67207 None:intergenic 55.0%
!! CCTCCTAGCTTGGCCTTACA+AGG + chr6_1:67185-67204 Msa0867330:CDS 55.0%
! TGGCCTTACAAGGGATGCGA+TGG + chr6_1:67195-67214 Msa0867330:CDS 55.0%
ATGGTCAACTATCGGCGAGC+AGG + chr6_1:67214-67233 Msa0867330:CDS 55.0%
TCAGCTCCTGAGGTGAGAGT+TGG + chr6_1:67671-67690 Msa0867330:CDS 55.0%
GCAACTCCAACTCTCACCTC+AGG - chr6_1:67680-67699 None:intergenic 55.0%
! GAGTTGCCTTTGGAAGCGGT+GGG + chr6_1:67693-67712 Msa0867330:CDS 55.0%
AGTCACTTCCAGCTACCGAG+TGG + chr6_1:67720-67739 Msa0867330:CDS 55.0%
AGAAGAAACACCGGGCCACT+CGG - chr6_1:67738-67757 None:intergenic 55.0%
AGTGGCCCGGTGTTTCTTCT+TGG + chr6_1:67738-67757 Msa0867330:CDS 55.0%
GGAAGACGTTCCTGACGACA+AGG + chr6_1:68302-68321 Msa0867330:CDS 55.0%
GACTGGGTTCAACTCCCAGA+TGG + chr6_1:68382-68401 Msa0867330:CDS 55.0%
GGGCAATAGGACCAGATTCC+GGG + chr6_1:68891-68910 Msa0867330:CDS 55.0%
GGCAATAGGACCAGATTCCG+GGG + chr6_1:68892-68911 Msa0867330:CDS 55.0%
CCAGAGTTGGCACCCTCAAA+TGG - chr6_1:68968-68987 None:intergenic 55.0%
!! CCATTTGAGGGTGCCAACTC+TGG + chr6_1:68965-68984 Msa0867330:CDS 55.0%
AATGACCAGGGTTCAGGCTC+AGG + chr6_1:70052-70071 Msa0867330:intron 55.0%
CATTTCCTGAGCCTGAACCC+TGG - chr6_1:70060-70079 None:intergenic 55.0%
CAGGGTTCAGGCTCAGGAAA+TGG + chr6_1:70058-70077 Msa0867330:intron 55.0%
!! ACTTGTGCCTCTGAGATCGG+CGG - chr6_1:70125-70144 None:intergenic 55.0%
!! CATCAGGGAACTCTAGGGTC+TGG - chr6_1:70395-70414 None:intergenic 55.0%
TCCGGAGCTTCAAACGTGCC+TGG - chr6_1:66989-67008 None:intergenic 60.0%
! GGAGTTGCCTTTGGAAGCGG+TGG + chr6_1:67692-67711 Msa0867330:CDS 60.0%
CTGACTCCCACCGCTTCCAA+AGG - chr6_1:67702-67721 None:intergenic 60.0%
GCCCGGTGTTTCTTCTTGGC+TGG + chr6_1:67742-67761 Msa0867330:CDS 60.0%
!! TGAGGGTGCCAACTCTGGAG+AGG + chr6_1:68970-68989 Msa0867330:CDS 60.0%
CTTGTTGCCGCCGATCTCAG+AGG + chr6_1:70115-70134 Msa0867330:CDS 60.0%
GATTAGGCGTGTCCCGGCGT+CGG + chr6_1:65840-65859 Msa0867330:intron 65.0%
ACACGACACGTGTCCGACGC+CGG - chr6_1:65856-65875 None:intergenic 65.0%
CTTCCAGCTACCGAGTGGCC+CGG + chr6_1:67725-67744 Msa0867330:CDS 65.0%
CACGACACGTGTCCGACGCC+GGG - chr6_1:65855-65874 None:intergenic 70.0%
ACACCGGGCCACTCGGTAGC+TGG - chr6_1:67731-67750 None:intergenic 70.0%
TCGTCGTCGCGGCTCCACCA+TGG - chr6_1:68139-68158 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 64931 71938 64931 ID=Msa0867330;Name=Msa0867330
chr6_1 mRNA 64931 71938 64931 ID=Msa0867330-mRNA-1;Parent=Msa0867330;Name=Msa0867330-mRNA-1;_AED=0.08;_eAED=0.08;_QI=397|1|1|1|1|1|14|471|828
chr6_1 exon 64931 65525 64931 ID=Msa0867330-mRNA-1:exon:0;Parent=Msa0867330-mRNA-1
chr6_1 exon 66430 66504 66430 ID=Msa0867330-mRNA-1:exon:1;Parent=Msa0867330-mRNA-1
chr6_1 exon 66584 66691 66584 ID=Msa0867330-mRNA-1:exon:2;Parent=Msa0867330-mRNA-1
chr6_1 exon 66990 67022 66990 ID=Msa0867330-mRNA-1:exon:3;Parent=Msa0867330-mRNA-1
chr6_1 exon 67146 67235 67146 ID=Msa0867330-mRNA-1:exon:4;Parent=Msa0867330-mRNA-1
chr6_1 exon 67413 67538 67413 ID=Msa0867330-mRNA-1:exon:5;Parent=Msa0867330-mRNA-1
chr6_1 exon 67620 67763 67620 ID=Msa0867330-mRNA-1:exon:6;Parent=Msa0867330-mRNA-1
chr6_1 exon 68105 68518 68105 ID=Msa0867330-mRNA-1:exon:7;Parent=Msa0867330-mRNA-1
chr6_1 exon 68857 68991 68857 ID=Msa0867330-mRNA-1:exon:8;Parent=Msa0867330-mRNA-1
chr6_1 exon 69076 69297 69076 ID=Msa0867330-mRNA-1:exon:9;Parent=Msa0867330-mRNA-1
chr6_1 exon 69376 69648 69376 ID=Msa0867330-mRNA-1:exon:10;Parent=Msa0867330-mRNA-1
chr6_1 exon 70061 70192 70061 ID=Msa0867330-mRNA-1:exon:11;Parent=Msa0867330-mRNA-1
chr6_1 exon 70360 70662 70360 ID=Msa0867330-mRNA-1:exon:12;Parent=Msa0867330-mRNA-1
chr6_1 exon 71234 71938 71234 ID=Msa0867330-mRNA-1:exon:13;Parent=Msa0867330-mRNA-1
chr6_1 five_prime_UTR 64931 65327 64931 ID=Msa0867330-mRNA-1:five_prime_utr;Parent=Msa0867330-mRNA-1
chr6_1 CDS 65328 65525 65328 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 66430 66504 66430 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 66584 66691 66584 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 66990 67022 66990 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 67146 67235 67146 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 67413 67538 67413 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 67620 67763 67620 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 68105 68518 68105 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 68857 68991 68857 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 69076 69297 69076 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 69376 69648 69376 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 70061 70192 70061 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 70360 70662 70360 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 CDS 71234 71467 71234 ID=Msa0867330-mRNA-1:cds;Parent=Msa0867330-mRNA-1
chr6_1 three_prime_UTR 71468 71938 71468 ID=Msa0867330-mRNA-1:three_prime_utr;Parent=Msa0867330-mRNA-1
Gene Sequence

>Msa0867330

ATGAGTAGAAAGAAAAGGGTATTTTCGATTGATAGTATTGAAGAGGTTGCTGTGGATTTCTTCAACTATGTTTTGCAGGAGAAGCCAAAGATTCCATTTTTCATTCCAGTTGTTTTGATTGCTTGGGTTGTTGAAAAATGGGTCTTTTCTTTTTCCACTTGGGTTCCTCTTGCACTTGCTGTTTGGGCTACTATACAGTATGGGAGATACCAACGCAAACTACTTGTAGAGGACTTGGATAAGAAATGGAAGCGAATCATATTGAATAACTCGCCCATCACACCATTGGAGCACTGTGAATGGCTGAATAAATTGTTGACAGAAATCTGGCCCAACTATTTTAATCCCAAGCTTTCTTCAAGGTTATCAGCTATAGTTGAGGCACGTTTGAAGCTCCGGAAACCAAGATTTCTTGAACGAGTTGAGCTGCAAGAGTTTTCACTAGGATCATGCCCTCCTAGCTTGGCCTTACAAGGGATGCGATGGTCAACTATCGGCGAGCAGCGAGTCATGCAACTTGGTTTTGATTGGGACACCCATGAAATGAGCATTTTGCTTCTTGCTAAGCTTGCGAAGCCATTGATGGGAACTGCACGAATCGTTATTAACAGTCTTCATATCAAGGGAGATCTTATCTTTACACCGATTTTAGATGGAAGAGCACTTTTATATTCGTTTGTATCAGCTCCTGAGGTGAGAGTTGGAGTTGCCTTTGGAAGCGGTGGGAGTCAGTCACTTCCAGCTACCGAGTGGCCCGGTGTTTCTTCTTGGCTGGAAAAACTTTTCACGGACACTTTGGTTAAAACCATGGTGGAGCCGCGACGACGATGTTTCACTCTGCCTGCTGTTGATTTAAGGAAAAAGGCGGTTGGAGGGATCATATATGTTAGAGTGATTTTAGCCAATAAACTTTATAGGAGTTCCTTCAAGGCATCTAGGAGGCAACAAAATGGATCAACCAATGGTTCTTCGGAAGACGTTCCTGACGACAAGGACCTACATACATTTGTAGAGGTAGAAATCGAGGAATTAACAAGGAGAACCGATGTCAGACTGGGTTCAACTCCCAGATGGGATGCACCGTTTAATATGGTTTTGCATGATAATACAGGAACTCTTCGTTTTAATCTTTTCGAGTGTATTCCCAACAATGTGAAGTGTGACTATCTAGGAAGTTGTGAAATTAAGCTGAGGCACGTTGAAGATGACTCAACAATAATGTGGGCAATAGGACCAGATTCCGGGGTTATAGCAAAGCAAGCACAATTTTGTGGAGATGAAATTGAAATGGTTGTCCCATTTGAGGGTGCCAACTCTGGAGAGTTGAAGGTGAGCATTGTAGTGAAAGAGTGGCAATTTTCTGATGGAACACATAGCTTAAACAATCTCCGAAACAACTCTCAGCAGTCACTTAACGGATCATCAAATATTCAGTTAAGAACCGGAAAGAAACTTAAAATAACTGTTGTAGAAGGAAAGGATCTTGCAGCTGCAAAAGAAAAATCTGGAAAATTTGATCCATACATTAAATTGCAATATGGAAAGGTTATGCAGAAAACAAAGACTTCTCATACTCCAAATCCTGTTTGGAATCAAACGATTGAATTTGATGAGGTTGGTGGCGGCGAATACTTAAAACTAAAAGTATTTACTGAGGAACTTTTCGGAGATGAAAACATTGGTAGTGCACAAGTAAATTTGGAAGGACTGGTTGATGGATCAGTCAGGGATGTATGGATTCCTCTTGAAAGAGTGCGTTCTGGAGAAATCAGACTTAAAATAGAAGCCATAAAAGTGGATGACCAAGAAGGATCAACGGGTTCAGGCTCAGGAAATGGTTGGATAGAACTTGTTCTGATTGAAGGGAGGGATCTTGTTGCCGCCGATCTCAGAGGCACAAGTGATCCATATGTTAGGGTACACTATGGAAACTTCAAGAAAAGAACAAAGGTTATATACAAAACTCTAACCCCTCAATGGAACCAGACCCTAGAGTTCCCTGATGATGGAAGTCCTTTGATGCTTTATGTGAAGGACCATAATGCGTTACTACCTACATCAAGTATAGGTGAATGTGTTGTAGAATATCAAAGGTTGCCTCCAAACCAGATGGCTGATAAGTGGATACCTCTTCAAGGTGTGAAAAAGGGTGAAATTCACATTCAAATTACTAGAAAAGTTCCAGAAATGCAGAAGAGGCAAAGTATGGACTCTGAACCTTCTTTGAGTAAATTACACCAAATTCCTAGCCAGATAAAACAGATGATGATCAAGTTTAGGTCTCAAATCGAAGATGGAAATCTTGAAGGACTCACTACAACCTTGAGTGAGCTAGAAACTTTAGAGGATACACAAGAAGGATATGTAGCTCAGCTAGAGACAGAACAAATGCTTCTTCTCAGCAAGATAAAGGAACTTGGCCAAGAGATCATTAATTCTTCTCCTTCTCCTTCCTTAAGCAGAAGACATTCTGAAAGTGTCAACTAA
Protein sequence

>Msa0867330

MSRKKRVFSIDSIEEVAVDFFNYVLQEKPKIPFFIPVVLIAWVVEKWVFSFSTWVPLALAVWATIQYGRYQRKLLVEDLDKKWKRIILNNSPITPLEHCEWLNKLLTEIWPNYFNPKLSSRLSAIVEARLKLRKPRFLERVELQEFSLGSCPPSLALQGMRWSTIGEQRVMQLGFDWDTHEMSILLLAKLAKPLMGTARIVINSLHIKGDLIFTPILDGRALLYSFVSAPEVRVGVAFGSGGSQSLPATEWPGVSSWLEKLFTDTLVKTMVEPRRRCFTLPAVDLRKKAVGGIIYVRVILANKLYRSSFKASRRQQNGSTNGSSEDVPDDKDLHTFVEVEIEELTRRTDVRLGSTPRWDAPFNMVLHDNTGTLRFNLFECIPNNVKCDYLGSCEIKLRHVEDDSTIMWAIGPDSGVIAKQAQFCGDEIEMVVPFEGANSGELKVSIVVKEWQFSDGTHSLNNLRNNSQQSLNGSSNIQLRTGKKLKITVVEGKDLAAAKEKSGKFDPYIKLQYGKVMQKTKTSHTPNPVWNQTIEFDEVGGGEYLKLKVFTEELFGDENIGSAQVNLEGLVDGSVRDVWIPLERVRSGEIRLKIEAIKVDDQEGSTGSGSGNGWIELVLIEGRDLVAADLRGTSDPYVRVHYGNFKKRTKVIYKTLTPQWNQTLEFPDDGSPLMLYVKDHNALLPTSSIGECVVEYQRLPPNQMADKWIPLQGVKKGEIHIQITRKVPEMQKRQSMDSEPSLSKLHQIPSQIKQMMIKFRSQIEDGNLEGLTTTLSELETLEDTQEGYVAQLETEQMLLLSKIKELGQEIINSSPSPSLSRRHSESVN*