AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0867400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867400 MtrunA17_Chr7g0262001 89.540 717 34 9 1 680 1 713 0.0 1229
Msa0867400 MtrunA17_Chr1g0183321 48.787 783 267 21 3 680 5 758 0.0 613
Msa0867400 MtrunA17_Chr1g0190311 38.617 694 348 17 1 666 1 644 8.10e-149 447
Msa0867400 MtrunA17_Chr8g0392541 49.254 201 75 5 362 554 118 299 2.16e-59 202
Msa0867400 MtrunA17_Chr5g0399801 26.911 327 175 9 354 661 803 1084 2.36e-27 118
Msa0867400 MtrunA17_Chr7g0255181 31.190 311 159 10 362 662 436 701 1.18e-25 112
Msa0867400 MtrunA17_Chr8g0354821 28.571 336 168 11 358 664 394 686 7.04e-25 110
Msa0867400 MtrunA17_Chr4g0003511 26.807 332 169 12 354 661 766 1047 2.90e-24 108
Msa0867400 MtrunA17_Chr3g0080761 27.829 327 168 9 362 662 376 660 4.15e-24 107
Msa0867400 MtrunA17_Chr4g0003501 26.748 329 171 10 354 661 671 950 5.13e-24 107
Msa0867400 MtrunA17_Chr8g0373821 36.306 157 94 3 486 638 361 515 9.33e-23 102
Msa0867400 MtrunA17_Chr5g0403241 33.516 182 111 4 486 662 1327 1503 2.96e-20 96.3
Msa0867400 MtrunA17_Chr4g0075321 34.973 183 107 5 486 662 884 1060 2.97e-19 92.8
Msa0867400 MtrunA17_Chr7g0252211 32.850 207 107 8 484 662 551 753 9.64e-18 87.8
Msa0867400 MtrunA17_Chr6g0476111 28.743 334 158 15 362 662 404 690 1.11e-16 84.3
Msa0867400 MtrunA17_Chr6g0476121 31.884 207 109 8 484 662 437 639 1.17e-16 84.0
Msa0867400 MtrunA17_Chr1g0163051 26.168 321 151 15 362 654 396 658 1.36e-15 80.5
Msa0867400 MtrunA17_Chr8g0368901 26.840 231 111 9 351 574 496 675 1.37e-15 80.9
Msa0867400 MtrunA17_Chr6g0467381 25.194 258 127 10 353 605 301 497 1.79e-14 77.0
Msa0867400 MtrunA17_Chr6g0467421 25.194 258 127 10 353 605 301 497 2.04e-14 76.6
Msa0867400 MtrunA17_Chr6g0467531 25.194 258 127 10 353 605 301 497 2.75e-14 76.3
Msa0867400 MtrunA17_Chr6g0467401 24.806 258 128 10 353 605 301 497 2.51e-13 73.2
Msa0867400 MtrunA17_Chr1g0170651 27.848 316 159 12 354 661 287 541 3.96e-13 72.4
Msa0867400 MtrunA17_Chr6g0460921 32.298 161 96 5 488 639 241 397 7.93e-13 70.9
Msa0867400 MtrunA17_Chr6g0467411 21.939 392 209 15 216 602 113 412 9.12e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867400 AT3G04380.2 51.534 326 144 6 362 674 119 443 1.59e-117 360
Msa0867400 AT3G04380.1 52.366 317 137 6 362 665 146 461 2.38e-117 360
Msa0867400 AT3G04380.3 51.534 326 144 6 362 674 130 454 2.79e-117 360
Msa0867400 AT3G04380.4 52.366 317 137 6 362 665 146 461 3.19e-117 360
Msa0867400 AT3G04380.6 51.534 326 144 6 362 674 119 443 3.46e-117 359
Msa0867400 AT3G04380.5 51.534 326 144 6 362 674 103 427 4.81e-117 358
Msa0867400 AT1G04050.3 52.994 334 139 6 352 671 295 624 1.40e-115 360
Msa0867400 AT5G43990.7 52.187 343 145 7 337 666 281 617 3.60e-115 359
Msa0867400 AT5G43990.8 52.187 343 145 7 337 666 301 637 3.67e-115 360
Msa0867400 AT5G43990.12 52.187 343 145 7 337 666 301 637 3.67e-115 360
Msa0867400 AT5G43990.6 52.187 343 145 7 337 666 301 637 3.67e-115 360
Msa0867400 AT5G43990.13 52.187 343 145 7 337 666 301 637 3.67e-115 360
Msa0867400 AT1G04050.2 52.994 334 139 6 352 671 399 728 7.93e-115 362
Msa0867400 AT1G04050.2 54.098 61 28 0 1 61 1 61 2.63e-12 70.5
Msa0867400 AT1G04050.1 52.994 334 139 6 352 671 399 728 7.93e-115 362
Msa0867400 AT1G04050.1 54.098 61 28 0 1 61 1 61 2.63e-12 70.5
Msa0867400 AT5G43990.16 52.187 343 145 7 337 666 350 686 8.50e-115 360
Msa0867400 AT5G43990.16 40.714 140 45 2 1 109 1 133 2.03e-19 93.2
Msa0867400 AT5G43990.5 52.187 343 145 7 337 666 350 686 8.50e-115 360
Msa0867400 AT5G43990.5 40.714 140 45 2 1 109 1 133 2.03e-19 93.2
Msa0867400 AT5G43990.17 52.187 343 145 7 337 666 350 686 8.50e-115 360
Msa0867400 AT5G43990.17 40.714 140 45 2 1 109 1 133 2.03e-19 93.2
Msa0867400 AT5G43990.14 52.187 343 145 7 337 666 350 686 8.50e-115 360
Msa0867400 AT5G43990.14 40.714 140 45 2 1 109 1 133 2.03e-19 93.2
Msa0867400 AT5G43990.3 52.187 343 145 7 337 666 370 706 1.02e-114 361
Msa0867400 AT5G43990.3 40.714 140 45 2 1 109 1 133 2.00e-19 93.6
Msa0867400 AT5G43990.11 52.187 343 145 7 337 666 370 706 1.02e-114 361
Msa0867400 AT5G43990.11 40.714 140 45 2 1 109 1 133 2.00e-19 93.6
Msa0867400 AT5G43990.1 52.187 343 145 7 337 666 370 706 1.02e-114 361
Msa0867400 AT5G43990.1 40.714 140 45 2 1 109 1 133 2.00e-19 93.6
Msa0867400 AT5G43990.4 52.187 343 145 7 337 666 370 706 1.02e-114 361
Msa0867400 AT5G43990.4 40.714 140 45 2 1 109 1 133 2.00e-19 93.6
Msa0867400 AT5G43990.15 52.187 343 145 7 337 666 373 709 1.36e-114 360
Msa0867400 AT5G43990.15 40.714 140 45 2 1 109 24 156 1.72e-19 93.6
Msa0867400 AT5G43990.10 52.187 343 145 7 337 666 373 709 1.36e-114 360
Msa0867400 AT5G43990.10 40.714 140 45 2 1 109 24 156 1.72e-19 93.6
Msa0867400 AT5G43990.9 52.187 343 145 7 337 666 393 729 1.98e-114 361
Msa0867400 AT5G43990.9 40.714 140 45 2 1 109 24 156 1.93e-19 93.6
Msa0867400 AT5G43990.2 52.187 343 145 7 337 666 393 729 1.98e-114 361
Msa0867400 AT5G43990.2 40.714 140 45 2 1 109 24 156 1.93e-19 93.6
Msa0867400 AT1G73100.1 29.394 330 170 11 354 662 378 665 3.90e-27 117
Msa0867400 AT5G04940.2 27.245 323 169 11 362 662 388 666 1.45e-24 109
Msa0867400 AT5G04940.1 27.245 323 169 11 362 662 388 666 1.45e-24 109
Msa0867400 AT2G23740.1 35.326 184 110 6 487 664 1193 1373 1.21e-21 101
Msa0867400 AT2G23740.3 35.326 184 110 6 487 664 1200 1380 1.48e-21 100
Msa0867400 AT2G23740.6 35.326 184 110 6 487 664 1200 1380 1.48e-21 100
Msa0867400 AT2G23740.2 35.326 184 110 6 487 664 1200 1380 1.48e-21 100
Msa0867400 AT1G17770.1 25.740 338 188 10 348 662 392 689 1.80e-20 96.7
Msa0867400 AT2G35160.2 26.710 307 158 11 362 661 543 789 2.02e-19 93.6
Msa0867400 AT2G35160.3 26.710 307 158 11 362 661 543 789 2.02e-19 93.6
Msa0867400 AT2G35160.1 26.710 307 158 11 362 661 543 789 2.02e-19 93.6
Msa0867400 AT2G35160.4 26.710 307 158 11 362 661 543 789 2.02e-19 93.6
Msa0867400 AT2G35160.5 26.710 307 158 11 362 661 507 753 2.30e-19 93.2
Msa0867400 AT2G22740.2 25.153 326 171 12 362 662 509 786 4.29e-18 89.4
Msa0867400 AT2G22740.1 25.153 326 171 12 362 662 509 786 4.29e-18 89.4
Msa0867400 AT3G03750.2 32.086 187 103 8 489 661 169 345 6.60e-16 80.5
Msa0867400 AT2G23740.4 37.069 116 69 4 487 600 1200 1313 4.19e-15 80.1
Msa0867400 AT2G23740.5 37.069 116 69 4 487 600 1200 1313 4.19e-15 80.1
Msa0867400 AT2G24740.1 25.740 338 175 14 348 662 467 751 2.70e-14 77.0

Find 203 sgRNAs with CRISPR-Local

Find 493 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAATATTGCACATGTTTC+TGG 0.088464 6_1:+168861 Msa0867400:three_prime_UTR
CATTCTGCATCCAATAAAAT+TGG 0.191716 6_1:-165553 None:intergenic
TGAAACATTGTTTGTTGGTT+AGG 0.263278 6_1:+162631 Msa0867400:five_prime_UTR
AATGGTGGTGGGAAGGAGTC+AGG 0.273158 6_1:+164655 Msa0867400:intron
TCATTCTTCGTTGAAGAATC+TGG 0.289372 6_1:-164117 None:intergenic
CCACTTTCAATTATTCTTCC+TGG 0.302409 6_1:+163605 Msa0867400:CDS
CTCCCTCTTAGAGGTTCTTC+AGG 0.302519 6_1:-163425 None:intergenic
ATCTCGGAACACCAAGTTTC+GGG 0.305414 6_1:-164854 None:intergenic
TTCTCCCTTTGTTAGGTCAT+TGG 0.308919 6_1:-164764 None:intergenic
TGGAATAACTTGCAACTTGC+AGG 0.315365 6_1:+165221 Msa0867400:CDS
AAAGGCCTCACTCGCTCTTC+TGG 0.320726 6_1:-163227 None:intergenic
ATAGATCTTCTCCCTCTTAG+AGG 0.322837 6_1:-163434 None:intergenic
TCGGGTACTGTACCAGGTTC+TGG 0.322983 6_1:-163338 None:intergenic
TCCAACCCACAACATGAGTT+TGG 0.324150 6_1:-168967 None:intergenic
TCGCATACAAATGCACCTTT+TGG 0.332075 6_1:-165451 None:intergenic
GTTTGTTGATCATAGCAAAA+TGG 0.336720 6_1:-169184 None:intergenic
GAGGCTAGCTCGGCATTAAA+AGG 0.339128 6_1:-164240 None:intergenic
CTCTTCAAGTGTCCTTTACA+TGG 0.346446 6_1:-165129 None:intergenic
TAGCAGTCTGGAACTACTTT+CGG 0.348541 6_1:-163357 None:intergenic
TGTTCTTGTGCAAATAAAAC+TGG 0.349678 6_1:+164964 Msa0867400:CDS
GAAGAATCTGGAACACTTGA+TGG 0.355050 6_1:-164105 None:intergenic
TCATCAACAGGCTCATCCTT+GGG 0.358814 6_1:-163563 None:intergenic
AAGTGGGCATTCTGTACAAT+AGG 0.359673 6_1:-165076 None:intergenic
TGCTTATATGCGGCATCATA+TGG 0.364693 6_1:+165610 Msa0867400:CDS
TAGTTTCCGGACAACATAAA+TGG 0.365456 6_1:+168889 Msa0867400:three_prime_UTR
TGGAGCATTCATTACATTGC+AGG 0.368904 6_1:-164698 None:intergenic
TTTCGACGAAGATGATAATC+AGG 0.370945 6_1:+162845 Msa0867400:CDS
AACACCAACTTTGTGCTGTC+TGG 0.372702 6_1:-168927 None:intergenic
GAAACTAGTACAGCATCATT+TGG 0.385206 6_1:-164604 None:intergenic
CGGAACGCAGCTACAACTTT+GGG 0.385346 6_1:-162696 None:intergenic
TTCAGTAGCCTGGGTCTTGT+TGG 0.388395 6_1:-168725 None:intergenic
CTACAGCCCTCCGAAAACTA+TGG 0.389476 6_1:+168811 Msa0867400:three_prime_UTR
TAAATCATTCATTACATCCT+TGG 0.389569 6_1:-164626 None:intergenic
GAAACATTGTTTGTTGGTTA+GGG 0.389918 6_1:+162632 Msa0867400:five_prime_UTR
ATCAGTCTGTGGAGCTGTTT+CGG 0.391115 6_1:+167509 Msa0867400:CDS
CGCAGCTACAACTTTGGGAT+TGG 0.391553 6_1:-162691 None:intergenic
AAAGATTCTTCTGTTGCAAA+TGG 0.393792 6_1:+164508 Msa0867400:CDS
TGTTCAGAAGGCGCCCGTCT+TGG 0.394036 6_1:-163271 None:intergenic
ATAGGAAGGGGAGGTGGATG+AGG 0.395095 6_1:+163196 Msa0867400:intron
GTTTCTGGAAGTGTAGTTTC+CGG 0.396788 6_1:+168876 Msa0867400:three_prime_UTR
ACGGAACGCAGCTACAACTT+TGG 0.397209 6_1:-162697 None:intergenic
TCAATTGCTGGGTGATAGAT+AGG 0.398723 6_1:+168647 Msa0867400:exon
ATATGTCTCTATCTCGTATT+GGG 0.401728 6_1:+164887 Msa0867400:CDS
CCAAAAGTGAAAATAACCTT+TGG 0.405264 6_1:+169026 Msa0867400:three_prime_UTR
GTGGGGTCTTCGTACCTTAG+AGG 0.409194 6_1:+165423 Msa0867400:CDS
CATCTCGGAACACCAAGTTT+CGG 0.414194 6_1:-164855 None:intergenic
TTGAAGAGGTTGAAATTAAG+AGG 0.415530 6_1:+163248 Msa0867400:CDS
ACTGTACCAGGTTCTGGTTT+CGG 0.417572 6_1:-163332 None:intergenic
TCTAGACCATTTATGTTGTC+CGG 0.423951 6_1:-168895 None:intergenic
TCTTGTTGGTCATTACTAAT+CGG 0.428446 6_1:-168711 None:intergenic
TTCCGTGCAATGTCGTGCCT+TGG 0.428506 6_1:+162714 Msa0867400:CDS
TCCGTGCAATGTCGTGCCTT+GGG 0.429548 6_1:+162715 Msa0867400:CDS
AAAAGGCACTTCTACATTTG+AGG 0.429762 6_1:-164223 None:intergenic
AATATGTCTCTATCTCGTAT+TGG 0.433955 6_1:+164886 Msa0867400:CDS
AGAGGTTCTTCAGGTGATGC+AGG 0.434234 6_1:-163416 None:intergenic
CTACTTTCGGGTACTGTACC+AGG 0.435962 6_1:-163344 None:intergenic
AGCAGTCTGGAACTACTTTC+GGG 0.436072 6_1:-163356 None:intergenic
GATGGACCCTCAACTTCAAC+CGG 0.436131 6_1:-167021 None:intergenic
TTCATCAACAGGCTCATCCT+TGG 0.443753 6_1:-163564 None:intergenic
TCATATTCCACTTCATCAAC+AGG 0.444462 6_1:-163575 None:intergenic
GGAAGTTTATTAAAGAGTGC+TGG 0.444835 6_1:+165151 Msa0867400:CDS
TTATTGAAGAAGAGAATTAT+CGG 0.445191 6_1:+162805 Msa0867400:CDS
TGCAAACTTGATTGAGATCC+CGG 0.450718 6_1:+167002 Msa0867400:CDS
TCAATTGTATGATGATGGTT+TGG 0.450870 6_1:-164718 None:intergenic
AGCATCAGATCGTCAATTGC+TGG 0.451142 6_1:+168635 Msa0867400:CDS
TGCAGTCGCGTTTAGAGAAC+CGG 0.451236 6_1:+163475 Msa0867400:CDS
ATAATTGAAACATTGTTTGT+TGG 0.460542 6_1:+162626 Msa0867400:five_prime_UTR
CCACTACATACCCCGAAACT+TGG 0.462264 6_1:+164843 Msa0867400:CDS
ATTCTGCATCCAATAAAATT+GGG 0.465274 6_1:-165552 None:intergenic
GGTATGTAGTGGAACGGAGG+TGG 0.467193 6_1:-164832 None:intergenic
AAGAGGCTGATTCAGTAGCC+TGG 0.469119 6_1:-168735 None:intergenic
GCAGCTACAACTTTGGGATT+GGG 0.472622 6_1:-162690 None:intergenic
GTGGGAAACATTGTGGCAAT+CGG 0.474223 6_1:+165187 Msa0867400:CDS
GTCAACAACGGCATTTCCAT+TGG 0.474546 6_1:-163381 None:intergenic
AACTTCAAACGGAAAAGGGT+GGG 0.474771 6_1:+165405 Msa0867400:CDS
ACAACCTCAGTTTCTGTCCT+CGG 0.476965 6_1:+162593 Msa0867400:five_prime_UTR
TATCATCAATTGTATGATGA+TGG 0.484509 6_1:-164723 None:intergenic
CTTAATTTCAACCTCTTCAA+AGG 0.485472 6_1:-163245 None:intergenic
AGATTGTTGTTCTACCTGTA+TGG 0.486001 6_1:+164915 Msa0867400:intron
TGTCAAGTCTTCTTCTGCCT+CGG 0.486075 6_1:+164540 Msa0867400:CDS
ATGGTGGTGGGAAGGAGTCA+GGG 0.489169 6_1:+164656 Msa0867400:intron
CAAAAGTGAAAATAACCTTT+GGG 0.493527 6_1:+169027 Msa0867400:three_prime_UTR
TTGTGAGAAAAGGGAATGGA+GGG 0.494511 6_1:-162335 None:intergenic
TACAGAAACGAAAATGTTGA+AGG 0.496217 6_1:+164183 Msa0867400:CDS
ATTGGATGCAGAATGGGACT+CGG 0.501646 6_1:+165561 Msa0867400:CDS
CGAGCTAGCCTCATCGTCTA+CGG 0.501846 6_1:+164251 Msa0867400:CDS
TGCTGGAGCAAATGTGGTTG+TGG 0.502795 6_1:+165168 Msa0867400:CDS
ACTTCAAACGGAAAAGGGTG+GGG 0.508982 6_1:+165406 Msa0867400:CDS
TCAAAAGAATCCGAGGCAAA+TGG 0.511223 6_1:+164463 Msa0867400:CDS
TGAGATCCCGGTTGAAGTTG+AGG 0.511676 6_1:+167014 Msa0867400:CDS
ATTTCCATTGGATAGCAGTC+TGG 0.512156 6_1:-163369 None:intergenic
TATTGAAGAAGAGAATTATC+GGG 0.513070 6_1:+162806 Msa0867400:CDS
TTAAGCAGTTTCTTCAACAC+AGG 0.513595 6_1:-162759 None:intergenic
TTTGACAACAGAGAGGCTCC+TGG 0.514647 6_1:-163506 None:intergenic
AGAGAACCGGCTGTTGAACC+AGG 0.516917 6_1:+163488 Msa0867400:CDS
CAGCACAGGAAGAGTTGACC+TGG 0.518514 6_1:+167203 Msa0867400:CDS
TGAAATTAAGAGGCCAAGAC+GGG 0.518857 6_1:+163258 Msa0867400:CDS
TTGTTGTTCTGTCAGGAGGT+TGG 0.519762 6_1:+168779 Msa0867400:three_prime_UTR
CCACGCTCTTCGACTCTCCA+AGG 0.522449 6_1:+162434 Msa0867400:five_prime_UTR
AGCCTCATCGTCTACGGGAG+AGG 0.522947 6_1:+164257 Msa0867400:CDS
GAGGCTCCTGGTTCAACAGC+CGG 0.523530 6_1:-163494 None:intergenic
ATGGGACTCGGGAGTTGTAA+AGG 0.526930 6_1:+165573 Msa0867400:CDS
TCCCAAGGCACGACATTGCA+CGG 0.527590 6_1:-162716 None:intergenic
CACTGCACAAGGTGTACTAA+AGG 0.528767 6_1:+165002 Msa0867400:CDS
TTTGTGAGAAAAGGGAATGG+AGG 0.528987 6_1:-162336 None:intergenic
ATCATACAATTGATGATACA+AGG 0.530123 6_1:+164728 Msa0867400:CDS
ACAGCATCATTTGGACCACT+TGG 0.530441 6_1:-164595 None:intergenic
CCAGGAAGAATAATTGAAAG+TGG 0.531870 6_1:-163605 None:intergenic
TTGAGCCACCGCTGTTCAGA+AGG 0.534992 6_1:-163283 None:intergenic
AATTAGTGTGCCATTTGCCT+CGG 0.535283 6_1:-164473 None:intergenic
GAGATCCCGGTTGAAGTTGA+GGG 0.535502 6_1:+167015 Msa0867400:CDS
GCATTTGTATGCGAGTTTGT+TGG 0.535737 6_1:+165460 Msa0867400:CDS
TCACCTGAAGAACCTCTAAG+AGG 0.535998 6_1:+163422 Msa0867400:CDS
CTTGAAATATCAAAGAATGA+TGG 0.536228 6_1:+165096 Msa0867400:CDS
TCATTCTTTGATATTTCAAG+TGG 0.536998 6_1:-165093 None:intergenic
ACCTTAGAGGATCTTCCAAA+AGG 0.538142 6_1:+165436 Msa0867400:CDS
CATCAACAGGCTCATCCTTG+GGG 0.539530 6_1:-163562 None:intergenic
CTTTGTGTTCCTCAATCCCA+AGG 0.541861 6_1:-162731 None:intergenic
AATGTGGTCAAGAATCTTGA+GGG 0.542538 6_1:-162410 None:intergenic
AAACATATAGGAAGGGGAGG+TGG 0.546203 6_1:+163190 Msa0867400:intron
TAAGACACAATTGCCCATAC+AGG 0.549177 6_1:-164929 None:intergenic
GGTTCTCTAAACGCGACTGC+AGG 0.550580 6_1:-163473 None:intergenic
AGCGAGTGAGGCCTTTGAAG+AGG 0.550939 6_1:+163234 Msa0867400:CDS
GTTGTTGCCATCTTGCTCTC+CGG 0.550961 6_1:-164145 None:intergenic
GAGCTAGCCTCATCGTCTAC+GGG 0.550975 6_1:+164252 Msa0867400:CDS
TGATGCTGTACTAGTTTCCA+AGG 0.551345 6_1:+164609 Msa0867400:CDS
GGCACTTCTACATTTGAGGA+AGG 0.554254 6_1:-164219 None:intergenic
TGTACTAAAGGAAGAGTTCG+TGG 0.555497 6_1:+165014 Msa0867400:CDS
CTCGTCCAGAAGAGCGAGTG+AGG 0.555750 6_1:+163222 Msa0867400:CDS
ACATGATAATAGTGATGAGA+TGG 0.557142 6_1:-167039 None:intergenic
TGCATCCAAACTCATGTTGT+GGG 0.558344 6_1:+168962 Msa0867400:three_prime_UTR
TTGAAATTAAGAGGCCAAGA+CGG 0.558896 6_1:+163257 Msa0867400:CDS
AGAGGCTGATTCAGTAGCCT+GGG 0.562283 6_1:-168734 None:intergenic
TAGTACACCTTGTGCAGTGT+AGG 0.562647 6_1:-164998 None:intergenic
CATCATATGGAAATGCTGCT+AGG 0.565185 6_1:+165623 Msa0867400:CDS
GATTGTTGTTCTACCTGTAT+GGG 0.567191 6_1:+164916 Msa0867400:intron
AATGCGGCAGTAAATTCTGC+AGG 0.567559 6_1:+167536 Msa0867400:CDS
TTCAAACATATAGGAAGGGG+AGG 0.567942 6_1:+163187 Msa0867400:intron
GTCATTACTAATCGGCAACA+TGG 0.573302 6_1:-168703 None:intergenic
CCGTCGAAGAGTTGCATGAG+AGG 0.574986 6_1:+165494 Msa0867400:CDS
CCAAGTTTCGGGGTATGTAG+TGG 0.575383 6_1:-164843 None:intergenic
CCTCTCATGCAACTCTTCGA+CGG 0.575833 6_1:-165494 None:intergenic
TAACTTCAAACGGAAAAGGG+TGG 0.576424 6_1:+165404 Msa0867400:CDS
GCTGGAGCAAATGTGGTTGT+GGG 0.576532 6_1:+165169 Msa0867400:CDS
AATGTCGTGCCTTGGGATTG+AGG 0.578104 6_1:+162722 Msa0867400:CDS
GCATCAGATCGTCAATTGCT+GGG 0.579660 6_1:+168636 Msa0867400:CDS
TCAGATTTGCTTGTGCCCAA+AGG 0.580632 6_1:-169042 None:intergenic
CAATGTGGTCAAGAATCTTG+AGG 0.581924 6_1:-162411 None:intergenic
TCCAAACTCATGTTGTGGGT+TGG 0.583738 6_1:+168966 Msa0867400:three_prime_UTR
AGTTCCAGACTGCTATCCAA+TGG 0.584444 6_1:+163365 Msa0867400:CDS
GCTACCAATGACCTAACAAA+GGG 0.586822 6_1:+164760 Msa0867400:CDS
GGTTGTTTAGAACCATGTAA+AGG 0.588108 6_1:+165117 Msa0867400:intron
TTGGATGCAGAATGGGACTC+GGG 0.591262 6_1:+165562 Msa0867400:CDS
CCGCATATAAGCAAAGAGCT+TGG 0.591694 6_1:-165600 None:intergenic
GGATGAGCCTGTTGATGAAG+TGG 0.592139 6_1:+163568 Msa0867400:CDS
TGGTGGTGGGAAGGAGTCAG+GGG 0.592292 6_1:+164657 Msa0867400:intron
CGTAGACGATGAGGCTAGCT+CGG 0.592376 6_1:-164250 None:intergenic
GCAAATGGCACACTAATTGA+CGG 0.593143 6_1:+164478 Msa0867400:CDS
GTTTCTTCACACTGCCCAAG+TGG 0.593879 6_1:+164580 Msa0867400:CDS
CAGCATCATTTGGACCACTT+GGG 0.595553 6_1:-164594 None:intergenic
GTATGTAGTGGAACGGAGGT+GGG 0.595993 6_1:-164831 None:intergenic
CCAAGCTCTTTGCTTATATG+CGG 0.599852 6_1:+165600 Msa0867400:CDS
GTAAAGATAACGCCAACAGT+TGG 0.607022 6_1:+164436 Msa0867400:CDS
TCAACGAAGAATGATACAGC+CGG 0.609769 6_1:+164126 Msa0867400:CDS
GATACAGCCGGAGAGCAAGA+TGG 0.613302 6_1:+164138 Msa0867400:CDS
ACTTCCAGACAGCACAAAGT+TGG 0.613527 6_1:+168923 Msa0867400:three_prime_UTR
CAGGAAGAATAATTGAAAGT+GGG 0.614074 6_1:-163604 None:intergenic
CACCTGAAGAACCTCTAAGA+GGG 0.617054 6_1:+163423 Msa0867400:CDS
TTGTGCAAATAAAACTGGAG+GGG 0.619905 6_1:+164969 Msa0867400:CDS
GTGATAAAAGGGTAAGCATG+AGG 0.620989 6_1:-163539 None:intergenic
GTGCATCCAAACTCATGTTG+TGG 0.621098 6_1:+168961 Msa0867400:three_prime_UTR
CTTGTGCAAATAAAACTGGA+GGG 0.623879 6_1:+164968 Msa0867400:CDS
CATTCTTTGATATTTCAAGT+GGG 0.624513 6_1:-165092 None:intergenic
ACATATTAACATATGCATCT+CGG 0.625013 6_1:-164870 None:intergenic
CATGTAAAGGACACTTGAAG+AGG 0.627286 6_1:+165130 Msa0867400:CDS
AAAACACCGAAACCAGAACC+TGG 0.629811 6_1:+163326 Msa0867400:CDS
CGGGGTATGTAGTGGAACGG+AGG 0.630898 6_1:-164835 None:intergenic
ATCAACAGGCTCATCCTTGG+GGG 0.632661 6_1:-163561 None:intergenic
TGGCCTTTCAAAAGAATCCG+AGG 0.635568 6_1:+164456 Msa0867400:CDS
TGTGAAGAAACGAGAGCTTG+AGG 0.636405 6_1:-164568 None:intergenic
TCTTGTGCAAATAAAACTGG+AGG 0.636661 6_1:+164967 Msa0867400:CDS
TCATACAATTGATGATACAA+GGG 0.638178 6_1:+164729 Msa0867400:CDS
TTTCGGGGTATGTAGTGGAA+CGG 0.641425 6_1:-164838 None:intergenic
TGCTACCAATGACCTAACAA+AGG 0.641969 6_1:+164759 Msa0867400:CDS
AAAGAGTGCTGGAGCAAATG+TGG 0.647429 6_1:+165162 Msa0867400:CDS
AGTTGCAAGTTATTCCACGT+TGG 0.647632 6_1:-165215 None:intergenic
TACCTCTCCCGTAGACGATG+AGG 0.655521 6_1:-164259 None:intergenic
CCTTGGAGAGTCGAAGAGCG+TGG 0.657116 6_1:-162434 None:intergenic
GAGCTGTTTCGGTGCAAATG+CGG 0.659533 6_1:+167520 Msa0867400:CDS
ATTGTCTGTCTCATCAACAA+TGG 0.660227 6_1:+162665 Msa0867400:exon
AGTAATGACCAACAAGACCC+AGG 0.660917 6_1:+168717 Msa0867400:three_prime_UTR
GACGGGCGCCTTCTGAACAG+CGG 0.662137 6_1:+163275 Msa0867400:CDS
AGTCGAAGAGCGTGGCAATG+TGG 0.663529 6_1:-162426 None:intergenic
TGTGGTTGTGGGAAACATTG+TGG 0.665887 6_1:+165180 Msa0867400:CDS
TGATGACGATGATCAGTCTG+TGG 0.667712 6_1:+167498 Msa0867400:CDS
TCTCGGAACACCAAGTTTCG+GGG 0.678594 6_1:-164853 None:intergenic
GGCAATCGGATTGTCCAACG+TGG 0.681486 6_1:+165201 Msa0867400:CDS
AGCACAGGAAGAGTTGACCT+GGG 0.686803 6_1:+167204 Msa0867400:CDS
CAATTATTACACGAAAACCG+AGG 0.695004 6_1:-162610 None:intergenic
AAAACCGAGGACAGAAACTG+AGG 0.707531 6_1:-162597 None:intergenic
ATGGACCCTCAACTTCAACC+GGG 0.708842 6_1:-167020 None:intergenic
AATGGCACACTAATTGACGG+AGG 0.733922 6_1:+164481 Msa0867400:CDS
GCAAGATGGCAACAACACTG+TGG 0.769030 6_1:+164152 Msa0867400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAATAAAAAAAATATGC+AGG + chr6_1:162368-162387 Msa0867400:five_prime_UTR 10.0%
!!! TTTTTTTTTTTGTGAGAAAA+GGG - chr6_1:162347-162366 None:intergenic 15.0%
!!! TTTTTTTTTTTTGTGAGAAA+AGG - chr6_1:162348-162367 None:intergenic 15.0%
!! TTAAATTGTATGATAAAAAC+TGG + chr6_1:162778-162797 Msa0867400:CDS 15.0%
!! TAAATTGTATGATAAAAACT+GGG + chr6_1:162779-162798 Msa0867400:CDS 15.0%
!! CAATATACAATACTTATTAT+TGG - chr6_1:163728-163747 None:intergenic 15.0%
!!! TTTTTTGAAAAGTAATTACT+TGG + chr6_1:165703-165722 Msa0867400:intron 15.0%
!!! TTGAGTTGAAATTAATTATA+AGG - chr6_1:165874-165893 None:intergenic 15.0%
!!! AATAATTTATTTTGAGAAAG+TGG + chr6_1:166527-166546 Msa0867400:intron 15.0%
!!! TGGTTTTTAATTTTTGAATA+AGG + chr6_1:166660-166679 Msa0867400:intron 15.0%
!! ATAAAATATGAAGCATAATT+AGG + chr6_1:166766-166785 Msa0867400:intron 15.0%
!! TAAAATATGAAGCATAATTA+GGG + chr6_1:166767-166786 Msa0867400:intron 15.0%
!!! TTGATATAAAGCTTTTTATT+TGG + chr6_1:167276-167295 Msa0867400:intron 15.0%
!!! TGTTGTTTAAAAATTTGTTT+TGG + chr6_1:167694-167713 Msa0867400:intron 15.0%
!! ATTAATTCAAAAAAATCACA+TGG + chr6_1:167895-167914 Msa0867400:intron 15.0%
!! AATAAAAAATAAAACAGAAG+AGG - chr6_1:168755-168774 None:intergenic 15.0%
!!! AAAACTTTTATGGTATTTTT+TGG + chr6_1:169137-169156 Msa0867400:three_prime_UTR 15.0%
!! GAACAAAAACGTAAATTAAT+CGG - chr6_1:162526-162545 None:intergenic 20.0%
!! ATAATTGAAACATTGTTTGT+TGG + chr6_1:162626-162645 Msa0867400:five_prime_UTR 20.0%
!! TTATTGAAGAAGAGAATTAT+CGG + chr6_1:162805-162824 Msa0867400:CDS 20.0%
!!! ACTGTTTTATATCATTTAAC+AGG + chr6_1:162943-162962 Msa0867400:intron 20.0%
!!! TAATAAGTATTGTATATTGC+TGG + chr6_1:163729-163748 Msa0867400:intron 20.0%
!! ATGAATGATTTATCAGAAAA+TGG + chr6_1:164637-164656 Msa0867400:intron 20.0%
!! AAGAAAAAGTGAAAATTTCA+TGG + chr6_1:164785-164804 Msa0867400:CDS 20.0%
!! AGAAAAAGTGAAAATTTCAT+GGG + chr6_1:164786-164805 Msa0867400:CDS 20.0%
!! AAGATGTCTAAATATGTTAA+GGG - chr6_1:165351-165370 None:intergenic 20.0%
!! AAAGATGTCTAAATATGTTA+AGG - chr6_1:165352-165371 None:intergenic 20.0%
!! TTGTAAAGATTTGAATACTT+TGG + chr6_1:165960-165979 Msa0867400:intron 20.0%
!! TGTAAAGATTTGAATACTTT+GGG + chr6_1:165961-165980 Msa0867400:intron 20.0%
!! TTGTAAAGATTTGAATACTT+TGG + chr6_1:165960-165979 Msa0867400:intron 20.0%
!! TGTAAAGATTTGAATACTTT+GGG + chr6_1:165961-165980 Msa0867400:intron 20.0%
!!! CTTATAACTAAATTTTTCCA+CGG + chr6_1:166142-166161 Msa0867400:intron 20.0%
!! CTATGAAAACAATTAGAAAT+TGG - chr6_1:166312-166331 None:intergenic 20.0%
!!! TATATCAAAATTATTTTCCC+TGG - chr6_1:166427-166446 None:intergenic 20.0%
!!! TAATTTTTGAATAAGGCTTT+TGG + chr6_1:166667-166686 Msa0867400:intron 20.0%
!!! TATGCTTCATATTTTATGTT+AGG - chr6_1:166763-166782 None:intergenic 20.0%
!! TTGAAAGTAAAACAAACTTA+TGG - chr6_1:167612-167631 None:intergenic 20.0%
!!! TTGTTTTGGATTTTGAATTT+TGG + chr6_1:167708-167727 Msa0867400:intron 20.0%
!!! TGTTTTGGATTTTGAATTTT+GGG + chr6_1:167709-167728 Msa0867400:intron 20.0%
!! AACTTGTAATTGTTAATTAC+AGG + chr6_1:167926-167945 Msa0867400:intron 20.0%
!!! AATAAGTTGAAAACAGTTTA+TGG - chr6_1:168112-168131 None:intergenic 20.0%
!! TTACGTTTTTGTTCATTTCT+AGG + chr6_1:162532-162551 Msa0867400:intron 25.0%
! TATTGAAGAAGAGAATTATC+GGG + chr6_1:162806-162825 Msa0867400:CDS 25.0%
!!! TCTTTTCTTATATTTGAGAC+CGG + chr6_1:163083-163102 Msa0867400:intron 25.0%
! ACATTATATAATTCTCCATC+CGG - chr6_1:163105-163124 None:intergenic 25.0%
! CTTTGTTACTGTTAATTCTA+TGG + chr6_1:163142-163161 Msa0867400:intron 25.0%
!!! TTAGGGTTTTTCAAACATAT+AGG + chr6_1:163178-163197 Msa0867400:intron 25.0%
!!! GTTTTTCAAACATATAGGAA+GGG + chr6_1:163183-163202 Msa0867400:intron 25.0%
!!! TTTTTCAAACATATAGGAAG+GGG + chr6_1:163184-163203 Msa0867400:intron 25.0%
!! AAGGAAAAAACTTCTTTTGA+AGG - chr6_1:163647-163666 None:intergenic 25.0%
!!! AAGAAGTTTTTTCCTTTTCA+CGG + chr6_1:163651-163670 Msa0867400:intron 25.0%
!!! TATATTGCTGGTTCAAATTT+TGG + chr6_1:163741-163760 Msa0867400:intron 25.0%
!!! ATTTTTTGCCCTTTAAATTC+CGG + chr6_1:163804-163823 Msa0867400:intron 25.0%
! ATGTGTAGAAGAAAGATAAA+TGG - chr6_1:164005-164024 None:intergenic 25.0%
! TGATTTGAATAATACTTTGC+AGG + chr6_1:164405-164424 Msa0867400:intron 25.0%
! TAAATCATTCATTACATCCT+TGG - chr6_1:164629-164648 None:intergenic 25.0%
! AATGATTTATCAGAAAATGG+TGG + chr6_1:164640-164659 Msa0867400:intron 25.0%
! TATCATCAATTGTATGATGA+TGG - chr6_1:164726-164745 None:intergenic 25.0%
!! ATCATACAATTGATGATACA+AGG + chr6_1:164728-164747 Msa0867400:CDS 25.0%
!! TCATACAATTGATGATACAA+GGG + chr6_1:164729-164748 Msa0867400:CDS 25.0%
! ACATATTAACATATGCATCT+CGG - chr6_1:164873-164892 None:intergenic 25.0%
!! CATTCTTTGATATTTCAAGT+GGG - chr6_1:165095-165114 None:intergenic 25.0%
! TCATTCTTTGATATTTCAAG+TGG - chr6_1:165096-165115 None:intergenic 25.0%
! CTTGAAATATCAAAGAATGA+TGG + chr6_1:165096-165115 Msa0867400:CDS 25.0%
!!! TTTTTAACTTCAAACGGAAA+AGG + chr6_1:165400-165419 Msa0867400:CDS 25.0%
!!! TTTTAACTTCAAACGGAAAA+GGG + chr6_1:165401-165420 Msa0867400:CDS 25.0%
! AACTTGAAATATCCCAAAAA+TGG + chr6_1:165517-165536 Msa0867400:CDS 25.0%
! ACTTGAAATATCCCAAAAAT+GGG + chr6_1:165518-165537 Msa0867400:CDS 25.0%
! ATTCTGCATCCAATAAAATT+GGG - chr6_1:165555-165574 None:intergenic 25.0%
!! AATTTTATTGGATGCAGAAT+GGG + chr6_1:165555-165574 Msa0867400:CDS 25.0%
! TCATTTCTATGGTATGTATT+GGG + chr6_1:166188-166207 Msa0867400:intron 25.0%
!! ACATTTTGTCTTCTTACATT+AGG - chr6_1:166347-166366 None:intergenic 25.0%
! CAATTTAAAAACAACACTCT+TGG - chr6_1:166725-166744 None:intergenic 25.0%
! AAAGTGGTTCAGTTTAATAA+TGG + chr6_1:166792-166811 Msa0867400:intron 25.0%
!!! AGTTTAATAATGGACAGATT+GGG + chr6_1:166802-166821 Msa0867400:intron 25.0%
! TTTACTGTTTACTGTATTTC+TGG + chr6_1:166892-166911 Msa0867400:intron 25.0%
! TTACTGTTTACTGTATTTCT+GGG + chr6_1:166893-166912 Msa0867400:intron 25.0%
!! TATAATTACCTTTGTTGTGT+AGG + chr6_1:167099-167118 Msa0867400:intron 25.0%
!!! ATTTGGTTCTGTAATATGTT+TGG + chr6_1:167234-167253 Msa0867400:intron 25.0%
!!! AAAGCTTTTTATTTGGTACT+TGG + chr6_1:167283-167302 Msa0867400:intron 25.0%
! TTGAAAAATGCCATGTATAA+TGG + chr6_1:167314-167333 Msa0867400:intron 25.0%
! TTTGTGTAATTCACTTTCTT+TGG + chr6_1:167391-167410 Msa0867400:intron 25.0%
! TTATGGACATTACATACAAA+TGG - chr6_1:167595-167614 None:intergenic 25.0%
! GAATAATCTTAAAAGGTAAC+AGG - chr6_1:167649-167668 None:intergenic 25.0%
! AGGAAGTGAATAATCTTAAA+AGG - chr6_1:167656-167675 None:intergenic 25.0%
! TCAAAATTTCGCTATTAATC+AGG - chr6_1:167845-167864 None:intergenic 25.0%
! TAAACTAGCAATTAAGTCAA+TGG - chr6_1:168000-168019 None:intergenic 25.0%
!! GACTTAATTGCTAGTTTAAA+AGG + chr6_1:168002-168021 Msa0867400:intron 25.0%
! TAAATGTAAAACCTCAAGTT+CGG - chr6_1:168039-168058 None:intergenic 25.0%
!! TTTTACATTTACTGGGTATT+TGG + chr6_1:168048-168067 Msa0867400:intron 25.0%
! GCATATGTTATAATAAAACC+AGG - chr6_1:168083-168102 None:intergenic 25.0%
!!! CTGCTTGTATAAGTTATTTT+TGG - chr6_1:168145-168164 None:intergenic 25.0%
! ATCATTTCTGCAATTGAAAA+GGG - chr6_1:168200-168219 None:intergenic 25.0%
! AATCATTTCTGCAATTGAAA+AGG - chr6_1:168201-168220 None:intergenic 25.0%
!!! ATTTTTTTTGTTGTTCTGTC+AGG + chr6_1:168772-168791 Msa0867400:three_prime_UTR 25.0%
! TAAAATATTGCACATGTTTC+TGG + chr6_1:168861-168880 Msa0867400:three_prime_UTR 25.0%
! AGTGTTTCCAAAAAACTATT+AGG + chr6_1:168993-169012 Msa0867400:three_prime_UTR 25.0%
!!! ATGAATGCCTAATAGTTTTT+TGG - chr6_1:169003-169022 None:intergenic 25.0%
!!! CAAAGGTTATTTTCACTTTT+GGG - chr6_1:169028-169047 None:intergenic 25.0%
! CAAAAGTGAAAATAACCTTT+GGG + chr6_1:169027-169046 Msa0867400:three_prime_UTR 25.0%
!! GTTGTCAAAGAAAACTTTTA+TGG + chr6_1:169127-169146 Msa0867400:three_prime_UTR 25.0%
!!! TTTTTTGTGAGAAAAGGGAA+TGG - chr6_1:162342-162361 None:intergenic 30.0%
ATTGAAGTCAAAGCAAGAAA+CGG - chr6_1:162475-162494 None:intergenic 30.0%
! TGAAACATTGTTTGTTGGTT+AGG + chr6_1:162631-162650 Msa0867400:five_prime_UTR 30.0%
! GAAACATTGTTTGTTGGTTA+GGG + chr6_1:162632-162651 Msa0867400:five_prime_UTR 30.0%
TTATATCATTTAACAGGCGT+TGG + chr6_1:162949-162968 Msa0867400:intron 30.0%
! TTGTTAATTGTTATTCCCTC+CGG + chr6_1:163015-163034 Msa0867400:intron 30.0%
CTAATGTATGATGTATAGAC+CGG - chr6_1:163037-163056 None:intergenic 30.0%
!! GGTTTTTCAAACATATAGGA+AGG + chr6_1:163182-163201 Msa0867400:intron 30.0%
CTTAATTTCAACCTCTTCAA+AGG - chr6_1:163248-163267 None:intergenic 30.0%
TTGAAGAGGTTGAAATTAAG+AGG + chr6_1:163248-163267 Msa0867400:CDS 30.0%
CAGGAAGAATAATTGAAAGT+GGG - chr6_1:163607-163626 None:intergenic 30.0%
!! AAAAACTTCTTTTGAAGGCA+TGG - chr6_1:163642-163661 None:intergenic 30.0%
TAAAGGGCAAAAAATCAATC+AGG - chr6_1:163799-163818 None:intergenic 30.0%
ATCAAATGCCGGAATTTAAA+GGG - chr6_1:163815-163834 None:intergenic 30.0%
ATTGCATATAACATAAGCCA+AGG - chr6_1:163857-163876 None:intergenic 30.0%
CACAATAAAAAGACCATTTC+TGG - chr6_1:163954-163973 None:intergenic 30.0%
AAGAAAGATAAATGGCACAA+AGG - chr6_1:163997-164016 None:intergenic 30.0%
TTCTTCTACACATTCTATTG+TGG + chr6_1:164012-164031 Msa0867400:intron 30.0%
! TCAACATTTTCGTTTCTGTA+TGG - chr6_1:164183-164202 None:intergenic 30.0%
TACAGAAACGAAAATGTTGA+AGG + chr6_1:164183-164202 Msa0867400:CDS 30.0%
TGACTAGGCAAAAAAATATC+CGG - chr6_1:164321-164340 None:intergenic 30.0%
!! ACATTGTCAGTTTTTAGACT+TGG - chr6_1:164348-164367 None:intergenic 30.0%
AAAGATTCTTCTGTTGCAAA+TGG + chr6_1:164508-164527 Msa0867400:CDS 30.0%
ATTTATCAGAAAATGGTGGT+GGG + chr6_1:164644-164663 Msa0867400:intron 30.0%
! ATTACATTGCAGGAATTTTG+AGG - chr6_1:164691-164710 None:intergenic 30.0%
!! TCAATTGTATGATGATGGTT+TGG - chr6_1:164721-164740 None:intergenic 30.0%
AATATGTCTCTATCTCGTAT+TGG + chr6_1:164886-164905 Msa0867400:CDS 30.0%
ATATGTCTCTATCTCGTATT+GGG + chr6_1:164887-164906 Msa0867400:CDS 30.0%
!!! GTTTTATTTGCACAAGAACA+TGG - chr6_1:164964-164983 None:intergenic 30.0%
TGTTCTTGTGCAAATAAAAC+TGG + chr6_1:164964-164983 Msa0867400:CDS 30.0%
! GTACAATAGGAATGATTTTG+TGG - chr6_1:165066-165085 None:intergenic 30.0%
!!! CAGGTGTTTTTAACTTCAAA+CGG + chr6_1:165394-165413 Msa0867400:intron 30.0%
!! AACGTATGTTTCCCATTTTT+GGG - chr6_1:165532-165551 None:intergenic 30.0%
! ACATACGTTCCCAATTTTAT+TGG + chr6_1:165543-165562 Msa0867400:CDS 30.0%
CATTCTGCATCCAATAAAAT+TGG - chr6_1:165556-165575 None:intergenic 30.0%
! CAATTTTATTGGATGCAGAA+TGG + chr6_1:165554-165573 Msa0867400:CDS 30.0%
TCAACAAGACTAAATTGCTA+AGG - chr6_1:165764-165783 None:intergenic 30.0%
!! ATAAGGTTGATGAACTAAAC+CGG - chr6_1:165857-165876 None:intergenic 30.0%
!!! AGTTTGATATTTTGACATGG+TGG - chr6_1:165905-165924 None:intergenic 30.0%
!!! CTCAGTTTGATATTTTGACA+TGG - chr6_1:165908-165927 None:intergenic 30.0%
GTCATTTCTATGGTATGTAT+TGG + chr6_1:166187-166206 Msa0867400:intron 30.0%
ATGTAAGAAGACAAAATGTC+AGG + chr6_1:166348-166367 Msa0867400:intron 30.0%
!! TGTTTAAGTTGAATCGTTTC+TGG - chr6_1:166374-166393 None:intergenic 30.0%
AAGCCTGAAACTGATAAAAT+CGG + chr6_1:166587-166606 Msa0867400:intron 30.0%
AAAACAACACTCTTGGAATT+TGG - chr6_1:166718-166737 None:intergenic 30.0%
!! ATGTTAGGTACTTTTTGTCT+GGG - chr6_1:166748-166767 None:intergenic 30.0%
!! TATGTTAGGTACTTTTTGTC+TGG - chr6_1:166749-166768 None:intergenic 30.0%
!! CAGTTTAATAATGGACAGAT+TGG + chr6_1:166801-166820 Msa0867400:intron 30.0%
TATTGTCAATAGCATGCAAA+TGG - chr6_1:166865-166884 None:intergenic 30.0%
ACATGATAATAGTGATGAGA+TGG - chr6_1:167042-167061 None:intergenic 30.0%
ACTATTATCATGTGAGAAGT+TGG + chr6_1:167049-167068 Msa0867400:intron 30.0%
TTTGGATTGTTTACATATGC+AGG + chr6_1:167409-167428 Msa0867400:intron 30.0%
!! ATAGTGTTTTTGCAGGATTA+TGG + chr6_1:167466-167485 Msa0867400:intron 30.0%
AACATAATCATGGACCAATT+TGG - chr6_1:167782-167801 None:intergenic 30.0%
! ACTTGAGGTTTTACATTTAC+TGG + chr6_1:168040-168059 Msa0867400:intron 30.0%
! CTTGAGGTTTTACATTTACT+GGG + chr6_1:168041-168060 Msa0867400:intron 30.0%
TCATTTCTGCAATTGAAAAG+GGG - chr6_1:168199-168218 None:intergenic 30.0%
TCTTGTTGGTCATTACTAAT+CGG - chr6_1:168714-168733 None:intergenic 30.0%
! AAAATAGCGTCCATAGTTTT+CGG - chr6_1:168824-168843 None:intergenic 30.0%
!! CCAAAGGTTATTTTCACTTT+TGG - chr6_1:169029-169048 None:intergenic 30.0%
CCAAAAGTGAAAATAACCTT+TGG + chr6_1:169026-169045 Msa0867400:three_prime_UTR 30.0%
AATGTGGTCAAGAATCTTGA+GGG - chr6_1:162413-162432 None:intergenic 35.0%
!!! TTGTTGATTTTGAAGAGTGG+TGG - chr6_1:162577-162596 None:intergenic 35.0%
!!! AGGTTGTTGATTTTGAAGAG+TGG - chr6_1:162580-162599 None:intergenic 35.0%
CAATTATTACACGAAAACCG+AGG - chr6_1:162613-162632 None:intergenic 35.0%
ATTGTCTGTCTCATCAACAA+TGG + chr6_1:162665-162684 Msa0867400:exon 35.0%
TTAAGCAGTTTCTTCAACAC+AGG - chr6_1:162762-162781 None:intergenic 35.0%
TTTCGACGAAGATGATAATC+AGG + chr6_1:162845-162864 Msa0867400:CDS 35.0%
GCATTCACATGTTATGTATC+TGG + chr6_1:162904-162923 Msa0867400:intron 35.0%
!! TTGTTTTTCTTTTCCTGCTC+CGG - chr6_1:162977-162996 None:intergenic 35.0%
! TTCTTATATTTGAGACCGGA+TGG + chr6_1:163087-163106 Msa0867400:intron 35.0%
TTGAAATTAAGAGGCCAAGA+CGG + chr6_1:163257-163276 Msa0867400:CDS 35.0%
!!! TTTCGGTGTTTTCAATGCAA+AGG - chr6_1:163318-163337 None:intergenic 35.0%
!!! TTTGCTTTTTGACAACAGAG+AGG - chr6_1:163516-163535 None:intergenic 35.0%
TCATATTCCACTTCATCAAC+AGG - chr6_1:163578-163597 None:intergenic 35.0%
CCAGGAAGAATAATTGAAAG+TGG - chr6_1:163608-163627 None:intergenic 35.0%
CCACTTTCAATTATTCTTCC+TGG + chr6_1:163605-163624 Msa0867400:CDS 35.0%
AAACGCTAAAAACCGTGAAA+AGG - chr6_1:163666-163685 None:intergenic 35.0%
!!! TTTTCACGGTTTTTAGCGTT+TGG + chr6_1:163665-163684 Msa0867400:intron 35.0%
CATCAAATGCCGGAATTTAA+AGG - chr6_1:163816-163835 None:intergenic 35.0%
CTTTAAATTCCGGCATTTGA+TGG + chr6_1:163814-163833 Msa0867400:intron 35.0%
GAAGTAGTACAATATGCAAG+TGG - chr6_1:163883-163902 None:intergenic 35.0%
CTGTCTTAAAAAGAGCTTTC+TGG - chr6_1:163913-163932 None:intergenic 35.0%
! GTTTTCTGTTACACCAGAAA+TGG + chr6_1:163938-163957 Msa0867400:intron 35.0%
!! ACACTTGATGGTTCTTTTGA+AGG - chr6_1:164096-164115 None:intergenic 35.0%
TCATTCTTCGTTGAAGAATC+TGG - chr6_1:164120-164139 None:intergenic 35.0%
!! AAAAGGCACTTCTACATTTG+AGG - chr6_1:164226-164245 None:intergenic 35.0%
TTTAGACTTGGATCATGACT+AGG - chr6_1:164336-164355 None:intergenic 35.0%
GAAACTAGTACAGCATCATT+TGG - chr6_1:164607-164626 None:intergenic 35.0%
GATTTATCAGAAAATGGTGG+TGG + chr6_1:164643-164662 Msa0867400:intron 35.0%
! CTTTTTCTTCTCCCTTTGTT+AGG - chr6_1:164774-164793 None:intergenic 35.0%
! AGATTGTTGTTCTACCTGTA+TGG + chr6_1:164915-164934 Msa0867400:intron 35.0%
! GATTGTTGTTCTACCTGTAT+GGG + chr6_1:164916-164935 Msa0867400:intron 35.0%
TCTTGTGCAAATAAAACTGG+AGG + chr6_1:164967-164986 Msa0867400:CDS 35.0%
CTTGTGCAAATAAAACTGGA+GGG + chr6_1:164968-164987 Msa0867400:CDS 35.0%
TTGTGCAAATAAAACTGGAG+GGG + chr6_1:164969-164988 Msa0867400:CDS 35.0%
! AGGAATGATTTTGTGGATCA+CGG - chr6_1:165059-165078 None:intergenic 35.0%
! GGTTGTTTAGAACCATGTAA+AGG + chr6_1:165117-165136 Msa0867400:intron 35.0%
! GGAAGTTTATTAAAGAGTGC+TGG + chr6_1:165151-165170 Msa0867400:CDS 35.0%
TTTCGATGTTGATGTCATTG+AGG + chr6_1:165288-165307 Msa0867400:intron 35.0%
! GAACGTATGTTTCCCATTTT+TGG - chr6_1:165533-165552 None:intergenic 35.0%
CTGCTAGGTTTATTAATCAC+AGG + chr6_1:165638-165657 Msa0867400:intron 35.0%
!! TAAGGTTGATGAACTAAACC+GGG - chr6_1:165856-165875 None:intergenic 35.0%
ACATACCATAGAAATGACAG+AGG - chr6_1:166185-166204 None:intergenic 35.0%
!!! CTTTGCTTGTTTTGACATAC+CGG + chr6_1:166254-166273 Msa0867400:intron 35.0%
TATTCATAATCTACTCCTGC+CGG - chr6_1:166276-166295 None:intergenic 35.0%
GCAGGAGTAGATTATGAATA+AGG + chr6_1:166276-166295 Msa0867400:intron 35.0%
CTTAAACAAGCTGTGTGATA+AGG + chr6_1:166386-166405 Msa0867400:intron 35.0%
AGCCTGAAACTGATAAAATC+GGG + chr6_1:166588-166607 Msa0867400:intron 35.0%
ATGGAATCGGTAAGTATACT+CGG + chr6_1:166616-166635 Msa0867400:intron 35.0%
!!! TGGTTTTGTGTAGTTGAGTT+AGG + chr6_1:166687-166706 Msa0867400:intron 35.0%
AACACTCTTGGAATTTGGTT+TGG - chr6_1:166713-166732 None:intergenic 35.0%
AAGCATAATTAGGGTGAAAG+TGG + chr6_1:166776-166795 Msa0867400:intron 35.0%
TTATGATTTAAGTGTCTGCC+TGG - chr6_1:166922-166941 None:intergenic 35.0%
TCAGTAATTCTATCCCGTTA+TGG + chr6_1:166967-166986 Msa0867400:intron 35.0%
ATCTAAACATCTGCCATAAC+GGG - chr6_1:166983-167002 None:intergenic 35.0%
CATCTAAACATCTGCCATAA+CGG - chr6_1:166984-167003 None:intergenic 35.0%
CAGTTAGCAAGGTTTCTAAA+GGG - chr6_1:167129-167148 None:intergenic 35.0%
TCAGTTAGCAAGGTTTCTAA+AGG - chr6_1:167130-167149 None:intergenic 35.0%
TTCAAAGACATCAGTTAGCA+AGG - chr6_1:167140-167159 None:intergenic 35.0%
! GATTTTTCTGGATGTGAAGA+AGG - chr6_1:167182-167201 None:intergenic 35.0%
TGCCATGTATAATGGTTAGT+TGG + chr6_1:167322-167341 Msa0867400:intron 35.0%
AGCCAACTAACCATTATACA+TGG - chr6_1:167327-167346 None:intergenic 35.0%
! TATAATGGTTAGTTGGCTCT+TGG + chr6_1:167329-167348 Msa0867400:intron 35.0%
!! TATGTGCATAGTGTTTTTGC+AGG + chr6_1:167459-167478 Msa0867400:intron 35.0%
ATCTCATAAGCATGAACCAA+GGG - chr6_1:167744-167763 None:intergenic 35.0%
TATCTCATAAGCATGAACCA+AGG - chr6_1:167745-167764 None:intergenic 35.0%
!! AGTGCTGACTAACATAATCA+TGG - chr6_1:167792-167811 None:intergenic 35.0%
AGTTTATCTAGTGTAGAGCA+CGG - chr6_1:167970-167989 None:intergenic 35.0%
AACTCACAATCTTGTGCTTA+CGG + chr6_1:168484-168503 Msa0867400:intron 35.0%
AACAACATTGTAATGCAAGC+AGG - chr6_1:168589-168608 None:intergenic 35.0%
!!! TTTTTTGTTGTTCTGTCAGG+AGG + chr6_1:168775-168794 Msa0867400:three_prime_UTR 35.0%
!!! TATTTTAATAGCGACGAGGA+TGG - chr6_1:168848-168867 None:intergenic 35.0%
!!! GCAATATTTTAATAGCGACG+AGG - chr6_1:168852-168871 None:intergenic 35.0%
TAGTTTCCGGACAACATAAA+TGG + chr6_1:168889-168908 Msa0867400:three_prime_UTR 35.0%
TCTAGACCATTTATGTTGTC+CGG - chr6_1:168898-168917 None:intergenic 35.0%
!!! GCACAAAGTTGGTGTTTTTT+CGG + chr6_1:168934-168953 Msa0867400:three_prime_UTR 35.0%
TTGTGAGAAAAGGGAATGGA+GGG - chr6_1:162338-162357 None:intergenic 40.0%
TTTGTGAGAAAAGGGAATGG+AGG - chr6_1:162339-162358 None:intergenic 40.0%
CAATGTGGTCAAGAATCTTG+AGG - chr6_1:162414-162433 None:intergenic 40.0%
GGAGCAGGAAAAGAAAAACA+AGG + chr6_1:162976-162995 Msa0867400:intron 40.0%
TGTATGATGTATAGACCGGA+GGG - chr6_1:163033-163052 None:intergenic 40.0%
ATGTATGATGTATAGACCGG+AGG - chr6_1:163034-163053 None:intergenic 40.0%
TATGGCTGCTGAAATGTGTT+AGG + chr6_1:163160-163179 Msa0867400:intron 40.0%
ATGGCTGCTGAAATGTGTTA+GGG + chr6_1:163161-163180 Msa0867400:intron 40.0%
TTCAAACATATAGGAAGGGG+AGG + chr6_1:163187-163206 Msa0867400:intron 40.0%
TGAAATTAAGAGGCCAAGAC+GGG + chr6_1:163258-163277 Msa0867400:CDS 40.0%
! TAGCAGTCTGGAACTACTTT+CGG - chr6_1:163360-163379 None:intergenic 40.0%
ATTTCCATTGGATAGCAGTC+TGG - chr6_1:163372-163391 None:intergenic 40.0%
CTTCTTTCCCTTGTCAACAA+CGG - chr6_1:163396-163415 None:intergenic 40.0%
ATAGATCTTCTCCCTCTTAG+AGG - chr6_1:163437-163456 None:intergenic 40.0%
GTGATAAAAGGGTAAGCATG+AGG - chr6_1:163542-163561 None:intergenic 40.0%
ACATAAGCCAAGGAATCACA+TGG - chr6_1:163847-163866 None:intergenic 40.0%
! GAAGAATCTGGAACACTTGA+TGG - chr6_1:164108-164127 None:intergenic 40.0%
TCAACGAAGAATGATACAGC+CGG + chr6_1:164126-164145 Msa0867400:CDS 40.0%
GAGATATATGTGTGTCTGCT+TGG + chr6_1:164369-164388 Msa0867400:intron 40.0%
ATATATGTGTGTCTGCTTGG+TGG + chr6_1:164372-164391 Msa0867400:intron 40.0%
GTAAAGATAACGCCAACAGT+TGG + chr6_1:164436-164455 Msa0867400:CDS 40.0%
!! TCTTTTGAAAGGCCAACTGT+TGG - chr6_1:164451-164470 None:intergenic 40.0%
! TTGCCTCGGATTCTTTTGAA+AGG - chr6_1:164462-164481 None:intergenic 40.0%
TCAAAAGAATCCGAGGCAAA+TGG + chr6_1:164463-164482 Msa0867400:CDS 40.0%
!! AATTAGTGTGCCATTTGCCT+CGG - chr6_1:164476-164495 None:intergenic 40.0%
GCAAATGGCACACTAATTGA+CGG + chr6_1:164478-164497 Msa0867400:CDS 40.0%
! TGATGCTGTACTAGTTTCCA+AGG + chr6_1:164609-164628 Msa0867400:CDS 40.0%
!!! TTGCAGGAATTTTGAGGCAT+AGG - chr6_1:164685-164704 None:intergenic 40.0%
! TGGAGCATTCATTACATTGC+AGG - chr6_1:164701-164720 None:intergenic 40.0%
TGCTACCAATGACCTAACAA+AGG + chr6_1:164759-164778 Msa0867400:CDS 40.0%
GCTACCAATGACCTAACAAA+GGG + chr6_1:164760-164779 Msa0867400:CDS 40.0%
TTCTCCCTTTGTTAGGTCAT+TGG - chr6_1:164767-164786 None:intergenic 40.0%
TAAGACACAATTGCCCATAC+AGG - chr6_1:164932-164951 None:intergenic 40.0%
TGTACTAAAGGAAGAGTTCG+TGG + chr6_1:165014-165033 Msa0867400:CDS 40.0%
AAGTGGGCATTCTGTACAAT+AGG - chr6_1:165079-165098 None:intergenic 40.0%
CTCTTCAAGTGTCCTTTACA+TGG - chr6_1:165132-165151 None:intergenic 40.0%
CATGTAAAGGACACTTGAAG+AGG + chr6_1:165130-165149 Msa0867400:CDS 40.0%
AGTTGCAAGTTATTCCACGT+TGG - chr6_1:165218-165237 None:intergenic 40.0%
! TGGAATAACTTGCAACTTGC+AGG + chr6_1:165221-165240 Msa0867400:CDS 40.0%
! CTAATGATTACGTGCTACTC+AGG + chr6_1:165375-165394 Msa0867400:intron 40.0%
TAACTTCAAACGGAAAAGGG+TGG + chr6_1:165404-165423 Msa0867400:CDS 40.0%
AACTTCAAACGGAAAAGGGT+GGG + chr6_1:165405-165424 Msa0867400:CDS 40.0%
ACCTTAGAGGATCTTCCAAA+AGG + chr6_1:165436-165455 Msa0867400:CDS 40.0%
!! ACCTTTTGGAAGATCCTCTA+AGG - chr6_1:165440-165459 None:intergenic 40.0%
! TCGCATACAAATGCACCTTT+TGG - chr6_1:165454-165473 None:intergenic 40.0%
GCATTTGTATGCGAGTTTGT+TGG + chr6_1:165460-165479 Msa0867400:CDS 40.0%
CCAAGCTCTTTGCTTATATG+CGG + chr6_1:165600-165619 Msa0867400:CDS 40.0%
TGCTTATATGCGGCATCATA+TGG + chr6_1:165610-165629 Msa0867400:CDS 40.0%
CATCATATGGAAATGCTGCT+AGG + chr6_1:165623-165642 Msa0867400:CDS 40.0%
! CTTGTCAACCTTTTCAACCA+TGG + chr6_1:166107-166126 Msa0867400:intron 40.0%
GTTTCACTCCATGGTTGAAA+AGG - chr6_1:166118-166137 None:intergenic 40.0%
ATAAGACGAGTTTCACTCCA+TGG - chr6_1:166127-166146 None:intergenic 40.0%
! GTGAACCTCTGTCATTTCTA+TGG + chr6_1:166177-166196 Msa0867400:intron 40.0%
AAACAAGCTGTGTGATAAGG+AGG + chr6_1:166389-166408 Msa0867400:intron 40.0%
AACAAGCTGTGTGATAAGGA+GGG + chr6_1:166390-166409 Msa0867400:intron 40.0%
GCCTGAAACTGATAAAATCG+GGG + chr6_1:166589-166608 Msa0867400:intron 40.0%
CCTGAAACTGATAAAATCGG+GGG + chr6_1:166590-166609 Msa0867400:intron 40.0%
TGGAATCGGTAAGTATACTC+GGG + chr6_1:166617-166636 Msa0867400:intron 40.0%
TGGACAGATTGGGAAATTAG+TGG + chr6_1:166812-166831 Msa0867400:intron 40.0%
!! CTGTTTACTGTATTTCTGGG+TGG + chr6_1:166896-166915 Msa0867400:intron 40.0%
TGCAAACTTGATTGAGATCC+CGG + chr6_1:167002-167021 Msa0867400:CDS 40.0%
! GGACTTGATTTTTCGTCTCT+AGG + chr6_1:167430-167449 Msa0867400:intron 40.0%
CATAGAGAATGACACAGTGT+AGG - chr6_1:167676-167695 None:intergenic 40.0%
!!! TTTTGGGTTTCAGATTCCCT+TGG + chr6_1:167725-167744 Msa0867400:intron 40.0%
TACTGCATCCACTTCCAAAT+TGG + chr6_1:167765-167784 Msa0867400:intron 40.0%
ATCATGGACCAATTTGGAAG+TGG - chr6_1:167776-167795 None:intergenic 40.0%
GGTATTTGGAAGATCTTACC+TGG + chr6_1:168062-168081 Msa0867400:intron 40.0%
!! ATGCAATTGAGGGAGCATTT+GGG - chr6_1:168285-168304 None:intergenic 40.0%
! ACGAGAAAGCATGCAATTGA+GGG - chr6_1:168295-168314 None:intergenic 40.0%
! TACGAGAAAGCATGCAATTG+AGG - chr6_1:168296-168315 None:intergenic 40.0%
TAACGAGGCTCAATTAACAG+TGG + chr6_1:168429-168448 Msa0867400:intron 40.0%
CGTAACGTGATTAAGTGTCA+TGG - chr6_1:168547-168566 None:intergenic 40.0%
TTCGTTTACCCTCATAATGC+AGG + chr6_1:168611-168630 Msa0867400:intron 40.0%
TGATGCTTCCTGCATTATGA+GGG - chr6_1:168622-168641 None:intergenic 40.0%
TCAATTGCTGGGTGATAGAT+AGG + chr6_1:168647-168666 Msa0867400:exon 40.0%
GTCATTACTAATCGGCAACA+TGG - chr6_1:168706-168725 None:intergenic 40.0%
! GTTTCTGGAAGTGTAGTTTC+CGG + chr6_1:168876-168895 Msa0867400:three_prime_UTR 40.0%
TGCATCCAAACTCATGTTGT+GGG + chr6_1:168962-168981 Msa0867400:three_prime_UTR 40.0%
GGTGCATAAAGAACGAACCT+TGG - chr6_1:162454-162473 None:intergenic 45.0%
ACAACCTCAGTTTCTGTCCT+CGG + chr6_1:162593-162612 Msa0867400:five_prime_UTR 45.0%
AAAACCGAGGACAGAAACTG+AGG - chr6_1:162600-162619 None:intergenic 45.0%
!! GCAGCTACAACTTTGGGATT+GGG - chr6_1:162693-162712 None:intergenic 45.0%
CTTTGTGTTCCTCAATCCCA+AGG - chr6_1:162734-162753 None:intergenic 45.0%
AAACATATAGGAAGGGGAGG+TGG + chr6_1:163190-163209 Msa0867400:intron 45.0%
AAAACACCGAAACCAGAACC+TGG + chr6_1:163326-163345 Msa0867400:CDS 45.0%
!! ACTGTACCAGGTTCTGGTTT+CGG - chr6_1:163335-163354 None:intergenic 45.0%
! AGCAGTCTGGAACTACTTTC+GGG - chr6_1:163359-163378 None:intergenic 45.0%
AGTTCCAGACTGCTATCCAA+TGG + chr6_1:163365-163384 Msa0867400:CDS 45.0%
GTCAACAACGGCATTTCCAT+TGG - chr6_1:163384-163403 None:intergenic 45.0%
TGGAAATGCCGTTGTTGACA+AGG + chr6_1:163385-163404 Msa0867400:intron 45.0%
GGAAATGCCGTTGTTGACAA+GGG + chr6_1:163386-163405 Msa0867400:intron 45.0%
TCACCTGAAGAACCTCTAAG+AGG + chr6_1:163422-163441 Msa0867400:CDS 45.0%
! CACCTGAAGAACCTCTAAGA+GGG + chr6_1:163423-163442 Msa0867400:CDS 45.0%
! TTACCCTTTTATCACCCCCA+AGG + chr6_1:163547-163566 Msa0867400:CDS 45.0%
CATCCTTGGGGGTGATAAAA+GGG - chr6_1:163553-163572 None:intergenic 45.0%
TCATCCTTGGGGGTGATAAA+AGG - chr6_1:163554-163573 None:intergenic 45.0%
TCATCAACAGGCTCATCCTT+GGG - chr6_1:163566-163585 None:intergenic 45.0%
TTCATCAACAGGCTCATCCT+TGG - chr6_1:163567-163586 None:intergenic 45.0%
GGCATGGTCAGTTAATTACC+AGG - chr6_1:163626-163645 None:intergenic 45.0%
AAGCCAAGGAATCACATGGT+GGG - chr6_1:163843-163862 None:intergenic 45.0%
TAAGCCAAGGAATCACATGG+TGG - chr6_1:163844-163863 None:intergenic 45.0%
GGCACTTCTACATTTGAGGA+AGG - chr6_1:164222-164241 None:intergenic 45.0%
TAAGCTGCACCTCAGTTCTT+TGG + chr6_1:164292-164311 Msa0867400:intron 45.0%
AAGCTGCACCTCAGTTCTTT+GGG + chr6_1:164293-164312 Msa0867400:intron 45.0%
! TGTGTCTGCTTGGTGGAATT+TGG + chr6_1:164379-164398 Msa0867400:intron 45.0%
TGGCCTTTCAAAAGAATCCG+AGG + chr6_1:164456-164475 Msa0867400:CDS 45.0%
AATGGCACACTAATTGACGG+AGG + chr6_1:164481-164500 Msa0867400:CDS 45.0%
TGTCAAGTCTTCTTCTGCCT+CGG + chr6_1:164540-164559 Msa0867400:CDS 45.0%
TGTGAAGAAACGAGAGCTTG+AGG - chr6_1:164571-164590 None:intergenic 45.0%
CAGCATCATTTGGACCACTT+GGG - chr6_1:164597-164616 None:intergenic 45.0%
ACAGCATCATTTGGACCACT+TGG - chr6_1:164598-164617 None:intergenic 45.0%
!! ATCAGAAAATGGTGGTGGGA+AGG + chr6_1:164648-164667 Msa0867400:intron 45.0%
! TTTCGGGGTATGTAGTGGAA+CGG - chr6_1:164841-164860 None:intergenic 45.0%
ATCTCGGAACACCAAGTTTC+GGG - chr6_1:164857-164876 None:intergenic 45.0%
CATCTCGGAACACCAAGTTT+CGG - chr6_1:164858-164877 None:intergenic 45.0%
! GATTTTGCCTACACTGCACA+AGG + chr6_1:164991-165010 Msa0867400:CDS 45.0%
TAGTACACCTTGTGCAGTGT+AGG - chr6_1:165001-165020 None:intergenic 45.0%
CACTGCACAAGGTGTACTAA+AGG + chr6_1:165002-165021 Msa0867400:CDS 45.0%
! ATTTTGTGGATCACGGCTGA+TGG - chr6_1:165052-165071 None:intergenic 45.0%
!! AAAGAGTGCTGGAGCAAATG+TGG + chr6_1:165162-165181 Msa0867400:CDS 45.0%
TGTGGTTGTGGGAAACATTG+TGG + chr6_1:165180-165199 Msa0867400:CDS 45.0%
GTGGGAAACATTGTGGCAAT+CGG + chr6_1:165187-165206 Msa0867400:CDS 45.0%
ATGTCATTGAGGCGACACTA+TGG + chr6_1:165299-165318 Msa0867400:intron 45.0%
TGTCATTGAGGCGACACTAT+GGG + chr6_1:165300-165319 Msa0867400:intron 45.0%
ACTTCAAACGGAAAAGGGTG+GGG + chr6_1:165406-165425 Msa0867400:CDS 45.0%
ATTGGATGCAGAATGGGACT+CGG + chr6_1:165561-165580 Msa0867400:CDS 45.0%
CCGCATATAAGCAAAGAGCT+TGG - chr6_1:165603-165622 None:intergenic 45.0%
! GTACAACGCATTTTGCTTCC+CGG + chr6_1:165835-165854 Msa0867400:intron 45.0%
! ATTTTTCCACGGTGTCCTTG+TGG + chr6_1:166153-166172 Msa0867400:intron 45.0%
! CCCCCGATTTTATCAGTTTC+AGG - chr6_1:166593-166612 None:intergenic 45.0%
CTGATAAAATCGGGGGAACA+TGG + chr6_1:166597-166616 Msa0867400:intron 45.0%
AAATCGGGGGAACATGGAAT+CGG + chr6_1:166603-166622 Msa0867400:intron 45.0%
GGAATCGGTAAGTATACTCG+GGG + chr6_1:166618-166637 Msa0867400:intron 45.0%
GAATCGGTAAGTATACTCGG+GGG + chr6_1:166619-166638 Msa0867400:intron 45.0%
AATCGGTAAGTATACTCGGG+GGG + chr6_1:166620-166639 Msa0867400:intron 45.0%
CATGCAAATGGAACGAACCT+TGG - chr6_1:166853-166872 None:intergenic 45.0%
AGGGTCAACCTACACAACAA+AGG - chr6_1:167110-167129 None:intergenic 45.0%
ATCCAGAAAAATCGCAGCAC+AGG + chr6_1:167189-167208 Msa0867400:CDS 45.0%
! TTCCTGTGCTGCGATTTTTC+TGG - chr6_1:167194-167213 None:intergenic 45.0%
! TTGACCTGGGTATGTCGATT+TGG + chr6_1:167217-167236 Msa0867400:intron 45.0%
AGAACCAAATCGACATACCC+AGG - chr6_1:167224-167243 None:intergenic 45.0%
TGAAGATGTCCACTGACAGA+TGG - chr6_1:167359-167378 None:intergenic 45.0%
! TGATGACGATGATCAGTCTG+TGG + chr6_1:167498-167517 Msa0867400:CDS 45.0%
ATCAGTCTGTGGAGCTGTTT+CGG + chr6_1:167509-167528 Msa0867400:CDS 45.0%
AATGCGGCAGTAAATTCTGC+AGG + chr6_1:167536-167555 Msa0867400:CDS 45.0%
CTTTGCTCATACCGAACTTG+AGG + chr6_1:168025-168044 Msa0867400:intron 45.0%
!! CATGCAATTGAGGGAGCATT+TGG - chr6_1:168286-168305 None:intergenic 45.0%
CACACATATCACTCATCGTC+TGG + chr6_1:168353-168372 Msa0867400:intron 45.0%
AATTGAGCCTCGTTAATGCC+TGG - chr6_1:168424-168443 None:intergenic 45.0%
CTGATGCTTCCTGCATTATG+AGG - chr6_1:168623-168642 None:intergenic 45.0%
AGCATCAGATCGTCAATTGC+TGG + chr6_1:168635-168654 Msa0867400:CDS 45.0%
GCATCAGATCGTCAATTGCT+GGG + chr6_1:168636-168655 Msa0867400:CDS 45.0%
AGTAATGACCAACAAGACCC+AGG + chr6_1:168717-168736 Msa0867400:three_prime_UTR 45.0%
! TTGTTGTTCTGTCAGGAGGT+TGG + chr6_1:168779-168798 Msa0867400:three_prime_UTR 45.0%
! TAGCGTCCATAGTTTTCGGA+GGG - chr6_1:168820-168839 None:intergenic 45.0%
! ATAGCGTCCATAGTTTTCGG+AGG - chr6_1:168821-168840 None:intergenic 45.0%
ACTTCCAGACAGCACAAAGT+TGG + chr6_1:168923-168942 Msa0867400:three_prime_UTR 45.0%
AACACCAACTTTGTGCTGTC+TGG - chr6_1:168930-168949 None:intergenic 45.0%
GTGCATCCAAACTCATGTTG+TGG + chr6_1:168961-168980 Msa0867400:three_prime_UTR 45.0%
TCCAAACTCATGTTGTGGGT+TGG + chr6_1:168966-168985 Msa0867400:three_prime_UTR 45.0%
TCCAACCCACAACATGAGTT+TGG - chr6_1:168970-168989 None:intergenic 45.0%
! TCAGATTTGCTTGTGCCCAA+AGG - chr6_1:169045-169064 None:intergenic 45.0%
!! CGCAGCTACAACTTTGGGAT+TGG - chr6_1:162694-162713 None:intergenic 50.0%
CGGAACGCAGCTACAACTTT+GGG - chr6_1:162699-162718 None:intergenic 50.0%
ACGGAACGCAGCTACAACTT+TGG - chr6_1:162700-162719 None:intergenic 50.0%
AATGTCGTGCCTTGGGATTG+AGG + chr6_1:162722-162741 Msa0867400:CDS 50.0%
!! CATTTAACAGGCGTTGGAGC+CGG + chr6_1:162955-162974 Msa0867400:intron 50.0%
! CTACTTTCGGGTACTGTACC+AGG - chr6_1:163347-163366 None:intergenic 50.0%
AGAGGTTCTTCAGGTGATGC+AGG - chr6_1:163419-163438 None:intergenic 50.0%
CTCCCTCTTAGAGGTTCTTC+AGG - chr6_1:163428-163447 None:intergenic 50.0%
TGCAGTCGCGTTTAGAGAAC+CGG + chr6_1:163475-163494 Msa0867400:CDS 50.0%
TTTGACAACAGAGAGGCTCC+TGG - chr6_1:163509-163528 None:intergenic 50.0%
ATCAACAGGCTCATCCTTGG+GGG - chr6_1:163564-163583 None:intergenic 50.0%
CATCAACAGGCTCATCCTTG+GGG - chr6_1:163565-163584 None:intergenic 50.0%
! GGATGAGCCTGTTGATGAAG+TGG + chr6_1:163568-163587 Msa0867400:CDS 50.0%
CATCCCACCATGTGATTCCT+TGG + chr6_1:163837-163856 Msa0867400:intron 50.0%
GTTGTTGCCATCTTGCTCTC+CGG - chr6_1:164148-164167 None:intergenic 50.0%
GCAAGATGGCAACAACACTG+TGG + chr6_1:164152-164171 Msa0867400:CDS 50.0%
! GAGGCTAGCTCGGCATTAAA+AGG - chr6_1:164243-164262 None:intergenic 50.0%
AGCTGCACCTCAGTTCTTTG+GGG + chr6_1:164294-164313 Msa0867400:intron 50.0%
GTTTCTTCACACTGCCCAAG+TGG + chr6_1:164580-164599 Msa0867400:CDS 50.0%
! GTATGTAGTGGAACGGAGGT+GGG - chr6_1:164834-164853 None:intergenic 50.0%
CCAAGTTTCGGGGTATGTAG+TGG - chr6_1:164846-164865 None:intergenic 50.0%
CCACTACATACCCCGAAACT+TGG + chr6_1:164843-164862 Msa0867400:CDS 50.0%
TCTCGGAACACCAAGTTTCG+GGG - chr6_1:164856-164875 None:intergenic 50.0%
TGCTGGAGCAAATGTGGTTG+TGG + chr6_1:165168-165187 Msa0867400:CDS 50.0%
GCTGGAGCAAATGTGGTTGT+GGG + chr6_1:165169-165188 Msa0867400:CDS 50.0%
CCTCTCATGCAACTCTTCGA+CGG - chr6_1:165497-165516 None:intergenic 50.0%
TTGGATGCAGAATGGGACTC+GGG + chr6_1:165562-165581 Msa0867400:CDS 50.0%
ATGGGACTCGGGAGTTGTAA+AGG + chr6_1:165573-165592 Msa0867400:CDS 50.0%
TGACAGAGGTTCACACCACA+AGG - chr6_1:166171-166190 None:intergenic 50.0%
!!! GCTTGTTTTGACATACCGGC+AGG + chr6_1:166258-166277 Msa0867400:intron 50.0%
AAGCTGTGTGATAAGGAGGG+AGG + chr6_1:166393-166412 Msa0867400:intron 50.0%
AGCTGTGTGATAAGGAGGGA+GGG + chr6_1:166394-166413 Msa0867400:intron 50.0%
GGGCTAGACGTAACTGTACT+TGG + chr6_1:166640-166659 Msa0867400:intron 50.0%
GGCAGCATTTCTGTAGACCA+AGG + chr6_1:166833-166852 Msa0867400:intron 50.0%
!! TACTGTATTTCTGGGTGGCC+AGG + chr6_1:166901-166920 Msa0867400:intron 50.0%
TGAGATCCCGGTTGAAGTTG+AGG + chr6_1:167014-167033 Msa0867400:CDS 50.0%
GAGATCCCGGTTGAAGTTGA+GGG + chr6_1:167015-167034 Msa0867400:CDS 50.0%
ATGGACCCTCAACTTCAACC+GGG - chr6_1:167023-167042 None:intergenic 50.0%
GATGGACCCTCAACTTCAAC+CGG - chr6_1:167024-167043 None:intergenic 50.0%
AGCACAGGAAGAGTTGACCT+GGG + chr6_1:167204-167223 Msa0867400:CDS 50.0%
! ATGGTTAGTTGGCTCTTGGC+CGG + chr6_1:167333-167352 Msa0867400:intron 50.0%
! GAGCTGTTTCGGTGCAAATG+CGG + chr6_1:167520-167539 Msa0867400:CDS 50.0%
CTCGTTAATGCCTGGCATCT+TGG - chr6_1:168416-168435 None:intergenic 50.0%
CAAGATGCCAGGCATTAACG+AGG + chr6_1:168414-168433 Msa0867400:intron 50.0%
AGAGCACGACAGATGTGACT+CGG - chr6_1:168521-168540 None:intergenic 50.0%
! TTCAGTAGCCTGGGTCTTGT+TGG - chr6_1:168728-168747 None:intergenic 50.0%
! AGAGGCTGATTCAGTAGCCT+GGG - chr6_1:168737-168756 None:intergenic 50.0%
! AAGAGGCTGATTCAGTAGCC+TGG - chr6_1:168738-168757 None:intergenic 50.0%
CTACAGCCCTCCGAAAACTA+TGG + chr6_1:168811-168830 Msa0867400:three_prime_UTR 50.0%
! AGTCGAAGAGCGTGGCAATG+TGG - chr6_1:162429-162448 None:intergenic 55.0%
TTCCGTGCAATGTCGTGCCT+TGG + chr6_1:162714-162733 Msa0867400:CDS 55.0%
TCCGTGCAATGTCGTGCCTT+GGG + chr6_1:162715-162734 Msa0867400:CDS 55.0%
TCCCAAGGCACGACATTGCA+CGG - chr6_1:162719-162738 None:intergenic 55.0%
ATAGGAAGGGGAGGTGGATG+AGG + chr6_1:163196-163215 Msa0867400:intron 55.0%
AAAGGCCTCACTCGCTCTTC+TGG - chr6_1:163230-163249 None:intergenic 55.0%
! AGCGAGTGAGGCCTTTGAAG+AGG + chr6_1:163234-163253 Msa0867400:CDS 55.0%
TTGAGCCACCGCTGTTCAGA+AGG - chr6_1:163286-163305 None:intergenic 55.0%
! TCGGGTACTGTACCAGGTTC+TGG - chr6_1:163341-163360 None:intergenic 55.0%
GGTTCTCTAAACGCGACTGC+AGG - chr6_1:163476-163495 None:intergenic 55.0%
AGAGAACCGGCTGTTGAACC+AGG + chr6_1:163488-163507 Msa0867400:CDS 55.0%
GGTGGGATGCCATCAAATGC+CGG - chr6_1:163826-163845 None:intergenic 55.0%
GATACAGCCGGAGAGCAAGA+TGG + chr6_1:164138-164157 Msa0867400:CDS 55.0%
! CGTAGACGATGAGGCTAGCT+CGG - chr6_1:164253-164272 None:intergenic 55.0%
! CGAGCTAGCCTCATCGTCTA+CGG + chr6_1:164251-164270 Msa0867400:CDS 55.0%
! GAGCTAGCCTCATCGTCTAC+GGG + chr6_1:164252-164271 Msa0867400:CDS 55.0%
TACCTCTCCCGTAGACGATG+AGG - chr6_1:164262-164281 None:intergenic 55.0%
! CACCTCAGTTCTTTGGGGAC+CGG + chr6_1:164299-164318 Msa0867400:intron 55.0%
ATCCGGTCCCCAAAGAACTG+AGG - chr6_1:164304-164323 None:intergenic 55.0%
!! AATGGTGGTGGGAAGGAGTC+AGG + chr6_1:164655-164674 Msa0867400:intron 55.0%
!! ATGGTGGTGGGAAGGAGTCA+GGG + chr6_1:164656-164675 Msa0867400:intron 55.0%
! GGTATGTAGTGGAACGGAGG+TGG - chr6_1:164835-164854 None:intergenic 55.0%
GGCAATCGGATTGTCCAACG+TGG + chr6_1:165201-165220 Msa0867400:CDS 55.0%
GTGGGGTCTTCGTACCTTAG+AGG + chr6_1:165423-165442 Msa0867400:CDS 55.0%
CCGTCGAAGAGTTGCATGAG+AGG + chr6_1:165494-165513 Msa0867400:CDS 55.0%
TTCACACCACAAGGACACCG+TGG - chr6_1:166162-166181 None:intergenic 55.0%
AGGAGGGAGGGAATCATTCC+AGG + chr6_1:166406-166425 Msa0867400:intron 55.0%
GGAGGGAGGGAATCATTCCA+GGG + chr6_1:166407-166426 Msa0867400:intron 55.0%
CAGCACAGGAAGAGTTGACC+TGG + chr6_1:167203-167222 Msa0867400:CDS 55.0%
GATGTCCACTGACAGATGGC+CGG - chr6_1:167355-167374 None:intergenic 55.0%
CGCTTGAATGCCAAGATGCC+AGG + chr6_1:168403-168422 Msa0867400:intron 55.0%
CCTTGGAGAGTCGAAGAGCG+TGG - chr6_1:162437-162456 None:intergenic 60.0%
CCACGCTCTTCGACTCTCCA+AGG + chr6_1:162434-162453 Msa0867400:five_prime_UTR 60.0%
CTCGTCCAGAAGAGCGAGTG+AGG + chr6_1:163222-163241 Msa0867400:CDS 60.0%
!! TGTTCAGAAGGCGCCCGTCT+TGG - chr6_1:163274-163293 None:intergenic 60.0%
GAGGCTCCTGGTTCAACAGC+CGG - chr6_1:163497-163516 None:intergenic 60.0%
AGCCTCATCGTCTACGGGAG+AGG + chr6_1:164257-164276 Msa0867400:CDS 60.0%
!! TGGTGGTGGGAAGGAGTCAG+GGG + chr6_1:164657-164676 Msa0867400:intron 60.0%
! CGGGGTATGTAGTGGAACGG+AGG - chr6_1:164838-164857 None:intergenic 60.0%
GACGGGCGCCTTCTGAACAG+CGG + chr6_1:163275-163294 Msa0867400:CDS 65.0%
GAGAGCTTGAGGTGCGACCG+AGG - chr6_1:164560-164579 None:intergenic 65.0%
CTTGGCCGGCCATCTGTCAG+TGG + chr6_1:167347-167366 Msa0867400:intron 65.0%
!! ACAGGCGTTGGAGCCGGAGC+AGG + chr6_1:162961-162980 Msa0867400:intron 70.0%
GGGCGCCTTCTGAACAGCGG+TGG + chr6_1:163278-163297 Msa0867400:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 162303 169192 162303 ID=Msa0867400;Name=Msa0867400
chr6_1 mRNA 162303 169192 162303 ID=Msa0867400-mRNA-1;Parent=Msa0867400;Name=Msa0867400-mRNA-1;_AED=0.11;_eAED=0.11;_QI=283|0.5|0.46|1|0.42|0.26|15|531|680
chr6_1 exon 162303 162455 162303 ID=Msa0867400-mRNA-1:exon:48;Parent=Msa0867400-mRNA-1
chr6_1 exon 162554 162866 162554 ID=Msa0867400-mRNA-1:exon:49;Parent=Msa0867400-mRNA-1
chr6_1 exon 163200 163397 163200 ID=Msa0867400-mRNA-1:exon:50;Parent=Msa0867400-mRNA-1
chr6_1 exon 163407 163626 163407 ID=Msa0867400-mRNA-1:exon:51;Parent=Msa0867400-mRNA-1
chr6_1 exon 164103 164278 164103 ID=Msa0867400-mRNA-1:exon:52;Parent=Msa0867400-mRNA-1
chr6_1 exon 164427 164633 164427 ID=Msa0867400-mRNA-1:exon:53;Parent=Msa0867400-mRNA-1
chr6_1 exon 164670 164910 164670 ID=Msa0867400-mRNA-1:exon:54;Parent=Msa0867400-mRNA-1
chr6_1 exon 164917 165117 164917 ID=Msa0867400-mRNA-1:exon:55;Parent=Msa0867400-mRNA-1
chr6_1 exon 165127 165242 165127 ID=Msa0867400-mRNA-1:exon:56;Parent=Msa0867400-mRNA-1
chr6_1 exon 165397 165644 165397 ID=Msa0867400-mRNA-1:exon:57;Parent=Msa0867400-mRNA-1
chr6_1 exon 166993 167059 166993 ID=Msa0867400-mRNA-1:exon:58;Parent=Msa0867400-mRNA-1
chr6_1 exon 167175 167225 167175 ID=Msa0867400-mRNA-1:exon:59;Parent=Msa0867400-mRNA-1
chr6_1 exon 167481 167577 167481 ID=Msa0867400-mRNA-1:exon:60;Parent=Msa0867400-mRNA-1
chr6_1 exon 167738 167746 167738 ID=Msa0867400-mRNA-1:exon:61;Parent=Msa0867400-mRNA-1
chr6_1 exon 168633 169192 168633 ID=Msa0867400-mRNA-1:exon:62;Parent=Msa0867400-mRNA-1
chr6_1 five_prime_UTR 162303 162455 162303 ID=Msa0867400-mRNA-1:five_prime_utr;Parent=Msa0867400-mRNA-1
chr6_1 five_prime_UTR 162554 162683 162554 ID=Msa0867400-mRNA-1:five_prime_utr;Parent=Msa0867400-mRNA-1
chr6_1 CDS 162684 162866 162684 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 163200 163397 163200 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 163407 163626 163407 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 164103 164278 164103 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 164427 164633 164427 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 164670 164910 164670 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 164917 165117 164917 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 165127 165242 165127 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 165397 165644 165397 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 166993 167059 166993 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 167175 167225 167175 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 167481 167577 167481 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 167738 167746 167738 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 CDS 168633 168661 168633 ID=Msa0867400-mRNA-1:cds;Parent=Msa0867400-mRNA-1
chr6_1 three_prime_UTR 168662 169192 168662 ID=Msa0867400-mRNA-1:three_prime_utr;Parent=Msa0867400-mRNA-1
Gene Sequence

>Msa0867400

ATGGCACCCAATCCCAAAGTTGTAGCTGCGTTCCGTGCAATGTCGTGCCTTGGGATTGAGGAACACAAAGTCAAACCTGTGTTGAAGAAACTGCTTAAATTGTATGATAAAAACTGGGAACTTATTGAAGAAGAGAATTATCGGGCTCTTGCTGATGCTATTTTCGACGAAGATGATAATCAGGAAGGGGAGGTGGATGAGGAAGCTCGTCCAGAAGAGCGAGTGAGGCCTTTGAAGAGGTTGAAATTAAGAGGCCAAGACGGGCGCCTTCTGAACAGCGGTGGCTCAAGTACAGCTGCCTTTGCATTGAAAACACCGAAACCAGAACCTGGTACAGTACCCGAAAGTAGTTCCAGACTGCTATCCAATGGAAATGCCGTTGGAAAGAAGCCTGCATCACCTGAAGAACCTCTAAGAGGGAGAAGATCTATATCTGACAGAACTCAACCTGCAGTCGCGTTTAGAGAACCGGCTGTTGAACCAGGAGCCTCTCTGTTGTCAAAAAGCAAAACGCCTCATGCTTACCCTTTTATCACCCCCAAGGATGAGCCTGTTGATGAAGTGGAATATGATTACGTCCCACTTTCAATTATTCTTCCTGAACCATCAAGTGTTCCAGATTCTTCAACGAAGAATGATACAGCCGGAGAGCAAGATGGCAACAACACTGTGGCATCACCATACAGAAACGAAAATGTTGAAGGTGAAGATATTCTTCCTTCCTCAAATGTAGAAGTGCCTTTTAATGCCGAGCTAGCCTCATCGTCTACGGGAGAGGAAGCATCTGTAAAGATAACGCCAACAGTTGGCCTTTCAAAAGAATCCGAGGCAAATGGCACACTAATTGACGGAGGAAATAAAGATTCTTCTGTTGCAAATGGATCAATCTCTGTCAAGTCTTCTTCTGCCTCGGTCGCACCTCAAGCTCTCGTTTCTTCACACTGCCCAAGTGGTCCAAATGATGCTGTACTAGTTTCCAAGGATGAGTCAGGGGAACCTATGCCTCAAAATTCCTGCAATGTAATGAATGCTCCAAACCATCATCATACAATTGATGATACAAGGGCTGTTTGTGCTACCAATGACCTAACAAAGGGAGAAGAAAAAGTGAAAATTTCATGGGTGAATGATTCTAATAATGATATCCCACCTCCGTTCCACTACATACCCCGAAACTTGGTGTTCCGAGATGCATATGTTAATATGTCTCTATCTCGTATTGGGAATTGTTGTTCTACCTGTATGGGCAATTGTGTCTTATCATCTAAACCATGTTCTTGTGCAAATAAAACTGGAGGGGATTTTGCCTACACTGCACAAGGTGTACTAAAGGAAGAGTTCGTGGAAGAGTGTATTGCCATCAGCCGTGATCCACAAAATCATTCCTATTGTACAGAATGCCCACTTGAAATATCAAAGAATGATGAACCATGTAAAGGACACTTGAAGAGGAAGTTTATTAAAGAGTGCTGGAGCAAATGTGGTTGTGGGAAACATTGTGGCAATCGGATTGTCCAACGTGGAATAACTTGCAACTTGCAGGTGTTTTTAACTTCAAACGGAAAAGGGTGGGGTCTTCGTACCTTAGAGGATCTTCCAAAAGGTGCATTTGTATGCGAGTTTGTTGGAGAAATTTTAACCGTCGAAGAGTTGCATGAGAGGAACTTGAAATATCCCAAAAATGGGAAACATACGTTCCCAATTTTATTGGATGCAGAATGGGACTCGGGAGTTGTAAAGGATAACCAAGCTCTTTGCTTATATGCGGCATCATATGGAAATGCTGCTAGATGTTTAGATGCAAACTTGATTGAGATCCCGGTTGAAGTTGAGGGTCCATCTCATCACTATTATCATTTTGCCTTCTTCACATCCAGAAAAATCGCAGCACAGGAAGAGTTGACCTGGGATTATGGTATCGATTTTGATGACGATGATCAGTCTGTGGAGCTGTTTCGGTGCAAATGCGGCAGTAAATTCTGCAGGAATATGAAGCGCTCAAATAATTCCCTTGGAAGCATCAGATCGTCAATTGCTGGGTGA
Protein sequence

>Msa0867400

MAPNPKVVAAFRAMSCLGIEEHKVKPVLKKLLKLYDKNWELIEEENYRALADAIFDEDDNQEGEVDEEARPEERVRPLKRLKLRGQDGRLLNSGGSSTAAFALKTPKPEPGTVPESSSRLLSNGNAVGKKPASPEEPLRGRRSISDRTQPAVAFREPAVEPGASLLSKSKTPHAYPFITPKDEPVDEVEYDYVPLSIILPEPSSVPDSSTKNDTAGEQDGNNTVASPYRNENVEGEDILPSSNVEVPFNAELASSSTGEEASVKITPTVGLSKESEANGTLIDGGNKDSSVANGSISVKSSSASVAPQALVSSHCPSGPNDAVLVSKDESGEPMPQNSCNVMNAPNHHHTIDDTRAVCATNDLTKGEEKVKISWVNDSNNDIPPPFHYIPRNLVFRDAYVNMSLSRIGNCCSTCMGNCVLSSKPCSCANKTGGDFAYTAQGVLKEEFVEECIAISRDPQNHSYCTECPLEISKNDEPCKGHLKRKFIKECWSKCGCGKHCGNRIVQRGITCNLQVFLTSNGKGWGLRTLEDLPKGAFVCEFVGEILTVEELHERNLKYPKNGKHTFPILLDAEWDSGVVKDNQALCLYAASYGNAARCLDANLIEIPVEVEGPSHHYYHFAFFTSRKIAAQEELTWDYGIDFDDDDQSVELFRCKCGSKFCRNMKRSNNSLGSIRSSIAG*