Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0867490 | XP_013445507.1 | 93.607 | 438 | 16 | 5 | 136 | 566 | 1 | 433 | 0.0 | 694 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0867490 | sp|Q9MAH8|TCP3_ARATH | 47.722 | 417 | 141 | 18 | 173 | 566 | 29 | 391 | 1.57e-92 | 292 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0867490 | A0A072TRR1 | 93.607 | 438 | 16 | 5 | 136 | 566 | 1 | 433 | 0.0 | 694 |
Gene ID | Type | Classification |
---|---|---|
Msa0867490 | TF | TCP |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0867490 | Msa1191020 | 0.813591 | 2.368824e-51 | -8.615850e-47 |
Msa0867490 | Msa1326450 | 0.820776 | 5.737754e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0867490 | MtrunA17_Chr8g0360441 | 93.607 | 438 | 16 | 5 | 136 | 566 | 1 | 433 | 0.0 | 694 |
Msa0867490 | MtrunA17_Chr2g0325171 | 43.445 | 389 | 139 | 13 | 176 | 557 | 7 | 321 | 6.77e-78 | 249 |
Msa0867490 | MtrunA17_Chr4g0040921 | 36.198 | 384 | 166 | 10 | 176 | 549 | 5 | 319 | 1.11e-53 | 185 |
Msa0867490 | MtrunA17_Chr2g0316391 | 87.059 | 85 | 11 | 0 | 176 | 260 | 3 | 87 | 9.88e-47 | 165 |
Msa0867490 | MtrunA17_Chr2g0316391 | 47.407 | 135 | 58 | 5 | 441 | 566 | 164 | 294 | 2.59e-13 | 70.9 |
Msa0867490 | MtrunA17_Chr7g0219461 | 61.842 | 76 | 29 | 0 | 187 | 262 | 51 | 126 | 2.27e-25 | 107 |
Msa0867490 | MtrunA17_Chr8g0376571 | 64.198 | 81 | 26 | 1 | 187 | 267 | 55 | 132 | 3.04e-25 | 109 |
Msa0867490 | MtrunA17_Chr4g0061561 | 62.319 | 69 | 26 | 0 | 186 | 254 | 50 | 118 | 5.38e-22 | 97.1 |
Msa0867490 | MtrunA17_Chr6g0454781 | 64.706 | 68 | 24 | 0 | 187 | 254 | 43 | 110 | 4.86e-21 | 94.7 |
Msa0867490 | MtrunA17_Chr3g0086961 | 58.824 | 68 | 28 | 0 | 187 | 254 | 51 | 118 | 1.27e-20 | 94.0 |
Msa0867490 | MtrunA17_Chr4g0062691 | 42.424 | 99 | 54 | 2 | 171 | 268 | 112 | 208 | 3.92e-17 | 83.6 |
Msa0867490 | MtrunA17_Chr1g0205131 | 55.738 | 61 | 27 | 0 | 192 | 252 | 108 | 168 | 1.27e-16 | 82.0 |
Msa0867490 | MtrunA17_Chr6g0456881 | 55.932 | 59 | 26 | 0 | 193 | 251 | 126 | 184 | 8.62e-16 | 79.7 |
Msa0867490 | MtrunA17_Chr7g0220931 | 37.391 | 115 | 68 | 2 | 138 | 252 | 69 | 179 | 7.22e-15 | 76.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0867490 | AT1G53230.1 | 47.722 | 417 | 141 | 18 | 173 | 566 | 29 | 391 | 1.60e-93 | 292 |
Msa0867490 | AT1G53230.2 | 47.722 | 417 | 141 | 18 | 173 | 566 | 29 | 391 | 1.60e-93 | 292 |
Msa0867490 | AT3G15030.2 | 47.991 | 448 | 141 | 20 | 166 | 566 | 18 | 420 | 1.77e-92 | 290 |
Msa0867490 | AT3G15030.4 | 47.991 | 448 | 141 | 20 | 166 | 566 | 18 | 420 | 1.77e-92 | 290 |
Msa0867490 | AT3G15030.3 | 47.991 | 448 | 141 | 20 | 166 | 566 | 18 | 420 | 1.77e-92 | 290 |
Msa0867490 | AT3G15030.1 | 47.991 | 448 | 141 | 20 | 166 | 566 | 18 | 420 | 1.77e-92 | 290 |
Msa0867490 | AT2G31070.1 | 45.652 | 230 | 67 | 7 | 171 | 390 | 7 | 188 | 9.99e-45 | 162 |
Msa0867490 | AT4G18390.1 | 70.588 | 68 | 20 | 0 | 187 | 254 | 36 | 103 | 9.52e-26 | 109 |
Msa0867490 | AT4G18390.2 | 70.588 | 68 | 20 | 0 | 187 | 254 | 36 | 103 | 9.52e-26 | 109 |
Msa0867490 | AT3G02150.1 | 50.000 | 122 | 56 | 1 | 134 | 255 | 20 | 136 | 4.36e-25 | 105 |
Msa0867490 | AT3G02150.2 | 49.593 | 123 | 57 | 1 | 133 | 255 | 19 | 136 | 2.40e-24 | 105 |
Msa0867490 | AT1G30210.2 | 63.768 | 69 | 25 | 0 | 186 | 254 | 43 | 111 | 1.49e-22 | 99.4 |
Msa0867490 | AT1G30210.1 | 63.768 | 69 | 25 | 0 | 186 | 254 | 43 | 111 | 1.49e-22 | 99.4 |
Msa0867490 | AT5G60970.1 | 61.538 | 65 | 25 | 0 | 187 | 251 | 57 | 121 | 1.49e-21 | 97.1 |
Msa0867490 | AT5G08070.2 | 60.000 | 65 | 26 | 0 | 187 | 251 | 27 | 91 | 3.48e-21 | 93.6 |
Msa0867490 | AT5G08070.1 | 60.000 | 65 | 26 | 0 | 187 | 251 | 27 | 91 | 3.48e-21 | 93.6 |
Msa0867490 | AT1G68800.1 | 51.471 | 68 | 33 | 0 | 189 | 256 | 108 | 175 | 2.03e-19 | 90.5 |
Msa0867490 | AT1G68800.2 | 51.471 | 68 | 33 | 0 | 189 | 256 | 108 | 175 | 2.32e-19 | 90.5 |
Msa0867490 | AT1G67260.2 | 52.113 | 71 | 34 | 0 | 188 | 258 | 82 | 152 | 6.80e-19 | 89.0 |
Msa0867490 | AT1G67260.3 | 52.113 | 71 | 34 | 0 | 188 | 258 | 82 | 152 | 6.80e-19 | 89.0 |
Msa0867490 | AT1G67260.1 | 52.113 | 71 | 34 | 0 | 188 | 258 | 82 | 152 | 1.00e-18 | 88.6 |
Msa0867490 | AT3G18550.2 | 52.459 | 61 | 29 | 0 | 192 | 252 | 147 | 207 | 8.89e-14 | 73.9 |
Msa0867490 | AT3G18550.1 | 52.459 | 61 | 29 | 0 | 192 | 252 | 147 | 207 | 9.13e-14 | 73.9 |
Msa0867490 | AT3G18550.4 | 52.459 | 61 | 29 | 0 | 192 | 252 | 147 | 207 | 9.13e-14 | 73.9 |
Msa0867490 | AT3G18550.3 | 52.459 | 61 | 29 | 0 | 192 | 252 | 147 | 207 | 1.04e-13 | 73.9 |
Find 170 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGGTGGTGGTGGTTGATT+AGG | 0.182690 | 6_1:-357517 | None:intergenic |
TCGTATACCAGCACGAATTC+AGG | 0.286283 | 6_1:+358782 | Msa0867490:CDS |
GTCTCTGGTGGTGGATTCTC+AGG | 0.305280 | 6_1:+358756 | Msa0867490:CDS |
ATCCATCAGGCTTCTGTCTC+TGG | 0.306407 | 6_1:+358741 | Msa0867490:CDS |
ATGATGATGATGATTTGTTC+TGG | 0.308723 | 6_1:-357209 | None:intergenic |
GACGTCGTGGGCGTTTCAAC+TGG | 0.345584 | 6_1:-358219 | None:intergenic |
TTGGTGGTGGTGGTTGATTA+GGG | 0.346128 | 6_1:-357516 | None:intergenic |
TCCGCTGCCGCTGATTCTCT+TGG | 0.351084 | 6_1:-357662 | None:intergenic |
AGCGGCAGCGGAGGAGGAGG+AGG | 0.358889 | 6_1:+357673 | Msa0867490:CDS |
GCACAGGCGTTTGGCGGTTA+TGG | 0.359637 | 6_1:+358594 | Msa0867490:CDS |
GTTCTAAATTCAAGTTATGT+AGG | 0.363850 | 6_1:+357286 | Msa0867490:CDS |
TGGTGGCTCTGAAGCATAAT+AGG | 0.365493 | 6_1:-358342 | None:intergenic |
CTTGGTGTTGGTGTTGGTGT+TGG | 0.370315 | 6_1:-357384 | None:intergenic |
ATCAGCGGCAGCGGAGGAGG+AGG | 0.374612 | 6_1:+357670 | Msa0867490:CDS |
GGCAGCGGAGGAGGAGGAGG+AGG | 0.377059 | 6_1:+357676 | Msa0867490:CDS |
TTGGGTCTTGGTGTTGGTGT+TGG | 0.377262 | 6_1:-357390 | None:intergenic |
AGCCAATCGACTGCTTTACT+TGG | 0.379997 | 6_1:-357865 | None:intergenic |
ATAACCAAGGGAGGAGTTTC+CGG | 0.384724 | 6_1:-358403 | None:intergenic |
GGAAGCAGAGGACGGTTTAT+CGG | 0.389422 | 6_1:-358829 | None:intergenic |
TATGGTGATGAGGGTCTTGT+TGG | 0.390978 | 6_1:-357258 | None:intergenic |
TGACTGGTAGAAGCGGTTAC+TGG | 0.399280 | 6_1:-358033 | None:intergenic |
GCAGAACAAGGGTCTGAGTC+TGG | 0.410070 | 6_1:+357180 | Msa0867490:CDS |
TGTTGTGGTTGTTGAAAGTA+GGG | 0.411278 | 6_1:-357430 | None:intergenic |
GGTCACATTGTCCGTTCAAC+AGG | 0.417152 | 6_1:+357721 | Msa0867490:CDS |
TGTTGTCCACCGGAGATTGC+CGG | 0.418132 | 6_1:-358008 | None:intergenic |
AGTACACCGGCACAGGCGTT+TGG | 0.420787 | 6_1:+358585 | Msa0867490:CDS |
CTGTTGCTGTTCCTGTGTGC+TGG | 0.422018 | 6_1:-357594 | None:intergenic |
CAGGCTTCTGTCTCTGGTGG+TGG | 0.423247 | 6_1:+358747 | Msa0867490:CDS |
AGAATCAGCGGCAGCGGAGG+AGG | 0.424143 | 6_1:+357667 | Msa0867490:CDS |
CTTGGTTGTTGTTGTGGTGG+TGG | 0.431039 | 6_1:-358371 | None:intergenic |
AACTCGCTCACCTCCCCGCT+TGG | 0.440715 | 6_1:+357917 | Msa0867490:CDS |
TTGTTGTGGTTGTTGAAAGT+AGG | 0.441495 | 6_1:-357431 | None:intergenic |
AGGAGGAGGAGGAGAAATCG+TGG | 0.443308 | 6_1:+357687 | Msa0867490:CDS |
TTGAATTTAGAACAGAGTTA+TGG | 0.443407 | 6_1:-357276 | None:intergenic |
CTATCTCCAACTGTTGTTGT+TGG | 0.445345 | 6_1:-358110 | None:intergenic |
GGTAACAGTGGCCATGGTGC+TGG | 0.446213 | 6_1:+358552 | Msa0867490:CDS |
ACGAACTGAAGGATTGTAAC+TGG | 0.446835 | 6_1:-358649 | None:intergenic |
GAGTCGTACGCGGCGGTCAC+GGG | 0.446966 | 6_1:-357785 | None:intergenic |
TATCTCCAACTGTTGTTGTT+GGG | 0.450024 | 6_1:-358109 | None:intergenic |
CATCGAATATGCAAGAAAGA+TGG | 0.450776 | 6_1:+357555 | Msa0867490:CDS |
TTCGCCGGAAACTCCTCCCT+TGG | 0.457148 | 6_1:+358399 | Msa0867490:CDS |
TGTTGTGGTGGTGGTTGTCA+TGG | 0.458311 | 6_1:-358362 | None:intergenic |
AATGATAGTGTTGGTGGTGG+TGG | 0.459132 | 6_1:-357526 | None:intergenic |
TTCTAAATTCAAGTTATGTA+GGG | 0.459287 | 6_1:+357287 | Msa0867490:CDS |
ACAGAAGCCTGATGGATCAT+TGG | 0.470560 | 6_1:-358735 | None:intergenic |
AGAGGCGGAGATCTTGCTGC+TGG | 0.481925 | 6_1:-358299 | None:intergenic |
TGTTGATGTGGGTGATAAAG+AGG | 0.483732 | 6_1:-357232 | None:intergenic |
TAATGCCGCTGAGCGGTGAC+TGG | 0.483807 | 6_1:-358049 | None:intergenic |
TGATGATGATGATTTGTTCT+GGG | 0.484606 | 6_1:-357208 | None:intergenic |
ATATTCGCCGTCGCCATTGA+AGG | 0.485547 | 6_1:-358684 | None:intergenic |
CATCTTTCTTGCATATTCGA+TGG | 0.485881 | 6_1:-357554 | None:intergenic |
ACAATCCTTCAGTTCGTGCT+TGG | 0.487224 | 6_1:+358655 | Msa0867490:CDS |
CGTATACCAGCACGAATTCA+GGG | 0.492711 | 6_1:+358783 | Msa0867490:CDS |
TCCTTCCCAACAACAACAGT+TGG | 0.493806 | 6_1:+358104 | Msa0867490:CDS |
GTCGTTCGAGAGAGTAAATC+CGG | 0.495710 | 6_1:-358264 | None:intergenic |
TCTTTCGCCAATGATCCATC+AGG | 0.495748 | 6_1:+358728 | Msa0867490:CDS |
TCCAAGAGAATCAGCGGCAG+CGG | 0.496376 | 6_1:+357661 | Msa0867490:CDS |
GTAGCTGTGGGGTTCCAAGC+GGG | 0.497547 | 6_1:-357931 | None:intergenic |
TTTGGTGGTTCAAGTGACTC+TGG | 0.503205 | 6_1:-357475 | None:intergenic |
AAGAGAATCAGCGGCAGCGG+AGG | 0.505536 | 6_1:+357664 | Msa0867490:CDS |
GGGTGATGAAAATGAAAGGT+TGG | 0.506158 | 6_1:-357409 | None:intergenic |
GGTTGATTAGGGTGTGGTAG+TGG | 0.510281 | 6_1:-357505 | None:intergenic |
TCCAACTGTTGTTGTTGGGA+AGG | 0.512262 | 6_1:-358105 | None:intergenic |
AATGTTTCACCGGCAATCTC+CGG | 0.513568 | 6_1:+357999 | Msa0867490:CDS |
GAAGGAAATTGTTGTTCTTG+TGG | 0.514512 | 6_1:-358087 | None:intergenic |
GGTTCAAGTGACTCTGGTTG+TGG | 0.517272 | 6_1:-357469 | None:intergenic |
GGAGAAATCGTGGAGGTACA+AGG | 0.518138 | 6_1:+357697 | Msa0867490:CDS |
AAAGCACTTGGTTGTTGTTG+TGG | 0.519575 | 6_1:-358377 | None:intergenic |
GTCATGATAGTGAGGATGCA+GGG | 0.520691 | 6_1:-357362 | None:intergenic |
GGTTATGACGGTGGTGGAAG+TGG | 0.521829 | 6_1:+358420 | Msa0867490:CDS |
TGTGTTCAGTACACCGGCAC+AGG | 0.522077 | 6_1:+358578 | Msa0867490:CDS |
ACACCGGCACAGGCGTTTGG+CGG | 0.524346 | 6_1:+358588 | Msa0867490:CDS |
GAACAGAGTTATGGTGATGA+GGG | 0.526425 | 6_1:-357267 | None:intergenic |
TCCCTTGGTTATGACGGTGG+TGG | 0.526752 | 6_1:+358414 | Msa0867490:CDS |
AACTCCTCCCTTGGTTATGA+CGG | 0.526876 | 6_1:+358408 | Msa0867490:CDS |
GAAAGGTTGGGTCTTGGTGT+TGG | 0.527721 | 6_1:-357396 | None:intergenic |
AGTTTCCGGCGAAAAGCACT+TGG | 0.528802 | 6_1:-358389 | None:intergenic |
ATCGAATATGCAAGAAAGAT+GGG | 0.531805 | 6_1:+357556 | Msa0867490:CDS |
TCTTCACCCTGAATTCGTGC+TGG | 0.532864 | 6_1:-358789 | None:intergenic |
GGTCTTTGCGTCCTGTTGAA+CGG | 0.539979 | 6_1:-357732 | None:intergenic |
TGCTTGGATAGATCCTTCAA+TGG | 0.540229 | 6_1:+358671 | Msa0867490:CDS |
CGGCAGATTGCATAGAATGA+TGG | 0.543570 | 6_1:+358488 | Msa0867490:CDS |
GGTGATGAAAATGAAAGGTT+GGG | 0.543954 | 6_1:-357408 | None:intergenic |
GAAAATGAAAGGTTGGGTCT+TGG | 0.547100 | 6_1:-357402 | None:intergenic |
AGGATTGTAACTGGACTGAA+GGG | 0.547857 | 6_1:-358640 | None:intergenic |
CACCAGAGACAGAAGCCTGA+TGG | 0.548735 | 6_1:-358743 | None:intergenic |
TAACCGCCAAACGCCTGTGC+CGG | 0.552179 | 6_1:-358591 | None:intergenic |
GTTACTGGATTGTTGTCCAC+CGG | 0.554367 | 6_1:-358018 | None:intergenic |
GCACTTGGTTGTTGTTGTGG+TGG | 0.555413 | 6_1:-358374 | None:intergenic |
GGCCAAGTAAAGCAGTCGAT+TGG | 0.560622 | 6_1:+357863 | Msa0867490:CDS |
ACAACACACGACCAGCACAC+AGG | 0.563376 | 6_1:+357583 | Msa0867490:CDS |
AGAACAGAGTTATGGTGATG+AGG | 0.565201 | 6_1:-357268 | None:intergenic |
GATTGCATAGAATGATGGCT+TGG | 0.567846 | 6_1:+358493 | Msa0867490:CDS |
GCGAGAGTCGGAGGAAGCAG+AGG | 0.568701 | 6_1:-358841 | None:intergenic |
AGTAAAGTATGCACCGCGAA+AGG | 0.570958 | 6_1:+357760 | Msa0867490:CDS |
AAACAAATGAAATGTTTCAC+CGG | 0.571359 | 6_1:+357989 | Msa0867490:CDS |
GCCGCTGATTCTCTTGGACG+AGG | 0.572452 | 6_1:-357656 | None:intergenic |
CATCAAGAGGAACATGATAA+CGG | 0.573201 | 6_1:+358468 | Msa0867490:CDS |
AAGGATTGTAACTGGACTGA+AGG | 0.573483 | 6_1:-358641 | None:intergenic |
GGTCATGATAGTGAGGATGC+AGG | 0.573744 | 6_1:-357363 | None:intergenic |
TGGTGTTGGTCATGATAGTG+AGG | 0.577626 | 6_1:-357370 | None:intergenic |
GAAGAGAATGATAGTGTTGG+TGG | 0.577778 | 6_1:-357532 | None:intergenic |
GGAAGAAGATAAGCAGAACA+AGG | 0.578458 | 6_1:+357168 | Msa0867490:intron |
GTAGAATTGAATCGCAGTGT+GGG | 0.579117 | 6_1:-357812 | None:intergenic |
GGTGGTGGTTGATTAGGGTG+TGG | 0.581421 | 6_1:-357511 | None:intergenic |
GAGGCGGAGATCTTGCTGCT+GGG | 0.582996 | 6_1:-358298 | None:intergenic |
AAGATCGTCTCGGCTATGAC+AGG | 0.584840 | 6_1:+357842 | Msa0867490:CDS |
CAATCAATGGCGAGAGTCGG+AGG | 0.587240 | 6_1:-358850 | None:intergenic |
CGTAGAATTGAATCGCAGTG+TGG | 0.587501 | 6_1:-357813 | None:intergenic |
CATCAGGCTTCTGTCTCTGG+TGG | 0.590853 | 6_1:+358744 | Msa0867490:CDS |
TCTATCCAAGCACGAACTGA+AGG | 0.592530 | 6_1:-358660 | None:intergenic |
AGTAGTAGCAGTGGGAAACA+TGG | 0.592595 | 6_1:+358141 | Msa0867490:CDS |
GGAAATTGTTGTTCTTGTGG+TGG | 0.596044 | 6_1:-358084 | None:intergenic |
ATGCTGCTGCTCAGACCACA+AGG | 0.600677 | 6_1:-358448 | None:intergenic |
TGTGGTGGTGGTTGTCATGG+TGG | 0.600873 | 6_1:-358359 | None:intergenic |
TTCCAATCAATGGCGAGAGT+CGG | 0.602863 | 6_1:-358853 | None:intergenic |
AGCACGAATTCAGGGTGAAG+AGG | 0.603117 | 6_1:+358791 | Msa0867490:CDS |
CTGTGGGGTTCCAAGCGGGG+AGG | 0.605239 | 6_1:-357927 | None:intergenic |
TCTAAATTCAAGTTATGTAG+GGG | 0.605920 | 6_1:+357288 | Msa0867490:CDS |
GATGGTGGTAACAGTGGCCA+TGG | 0.608651 | 6_1:+358546 | Msa0867490:CDS |
GATAGATCCTTCAATGGCGA+CGG | 0.613580 | 6_1:+358677 | Msa0867490:CDS |
GACTACAACAGTAGTAGCAG+TGG | 0.615455 | 6_1:+358132 | Msa0867490:CDS |
GTTTCACCGGCAATCTCCGG+TGG | 0.616152 | 6_1:+358002 | Msa0867490:CDS |
TACGACGTGCAAGATCGTCT+CGG | 0.617162 | 6_1:+357832 | Msa0867490:CDS |
CGGTGCATACTTTACTGTGA+CGG | 0.619367 | 6_1:-357753 | None:intergenic |
GTCTGAGCAGCAGCATCAAG+AGG | 0.619394 | 6_1:+358455 | Msa0867490:CDS |
TTCCACCACCGTCATAACCA+AGG | 0.620568 | 6_1:-358416 | None:intergenic |
ATAACTGTGAAACGACGTCG+TGG | 0.622223 | 6_1:-358232 | None:intergenic |
CTTGAAAAGATTGCAATGAG+AGG | 0.622677 | 6_1:-358317 | None:intergenic |
GAGTCGGAGGAAGCAGAGGA+CGG | 0.623160 | 6_1:-358837 | None:intergenic |
TCTAAATCTAGATATTGTTG+TGG | 0.625239 | 6_1:-357445 | None:intergenic |
ACCTCGTCCAAGAGAATCAG+CGG | 0.626058 | 6_1:+357655 | Msa0867490:CDS |
TGTTGAAGAACATGTAGCTG+TGG | 0.626291 | 6_1:-357944 | None:intergenic |
GTAGGGGTGATGAAAATGAA+AGG | 0.628405 | 6_1:-357413 | None:intergenic |
GTTGAAGAACATGTAGCTGT+GGG | 0.630226 | 6_1:-357943 | None:intergenic |
TCCTCCCTTGGTTATGACGG+TGG | 0.633414 | 6_1:+358411 | Msa0867490:CDS |
TGGATTTGTGTTCAGTACAC+CGG | 0.633611 | 6_1:+358572 | Msa0867490:CDS |
GAAAAGATTGCAATGAGAGG+CGG | 0.637117 | 6_1:-358314 | None:intergenic |
TCACAGTTATCAACAACCGC+CGG | 0.637674 | 6_1:+358245 | Msa0867490:CDS |
ATGGAAGAGAATGATAGTGT+TGG | 0.638781 | 6_1:-357535 | None:intergenic |
GGATTTACTCTCTCGAACGA+CGG | 0.642953 | 6_1:+358266 | Msa0867490:CDS |
TCATGATAGTGAGGATGCAG+GGG | 0.644305 | 6_1:-357361 | None:intergenic |
GCGGAGATCTTGCTGCTGGG+TGG | 0.647953 | 6_1:-358295 | None:intergenic |
GTTGTGGTTGTTGAAAGTAG+GGG | 0.648030 | 6_1:-357429 | None:intergenic |
TCCACCACCGTCATAACCAA+GGG | 0.649518 | 6_1:-358415 | None:intergenic |
GTGGAAGTGGAAGCACCTTG+TGG | 0.652297 | 6_1:+358433 | Msa0867490:CDS |
GAGAATGATAGTGTTGGTGG+TGG | 0.653363 | 6_1:-357529 | None:intergenic |
GTTAATGCTAATGCTGCAGA+TGG | 0.654669 | 6_1:+358528 | Msa0867490:CDS |
ACTACAACAGTAGTAGCAGT+GGG | 0.659751 | 6_1:+358133 | Msa0867490:CDS |
AATGCTAATGCTGCAGATGG+TGG | 0.664064 | 6_1:+358531 | Msa0867490:CDS |
TAACTGTGAAACGACGTCGT+GGG | 0.673437 | 6_1:-358231 | None:intergenic |
TGAGCGGTGACTGGTAGAAG+CGG | 0.674706 | 6_1:-358040 | None:intergenic |
ACCACCGTCATAACCAAGGG+AGG | 0.674731 | 6_1:-358412 | None:intergenic |
TTCGCTCTAATGCCGCTGAG+CGG | 0.675852 | 6_1:-358056 | None:intergenic |
TGTAGCTGTGGGGTTCCAAG+CGG | 0.687312 | 6_1:-357932 | None:intergenic |
GAAGAAGATAAGCAGAACAA+GGG | 0.698733 | 6_1:+357169 | Msa0867490:intron |
GCTGCAGATGGTGGTAACAG+TGG | 0.701228 | 6_1:+358540 | Msa0867490:CDS |
GGATTGTAACTGGACTGAAG+GGG | 0.704803 | 6_1:-358639 | None:intergenic |
TGAACACAAATCCAGCACCA+TGG | 0.705786 | 6_1:-358563 | None:intergenic |
TGATGATGATTTGTTCTGGG+AGG | 0.715838 | 6_1:-357205 | None:intergenic |
TGTGGGCTGAGAGTCGTACG+CGG | 0.717449 | 6_1:-357795 | None:intergenic |
AGGAGGAGGAGAAATCGTGG+AGG | 0.725082 | 6_1:+357690 | Msa0867490:CDS |
TTGGCGAAAGATAGTGATGG+TGG | 0.728203 | 6_1:-358716 | None:intergenic |
TTTACTCTCTCGAACGACGG+CGG | 0.728543 | 6_1:+358269 | Msa0867490:CDS |
GTTCGAGAGAGTAAATCCGG+CGG | 0.739877 | 6_1:-358261 | None:intergenic |
GAAATCGTGGAGGTACAAGG+AGG | 0.742186 | 6_1:+357700 | Msa0867490:CDS |
GGGCTGAGAGTCGTACGCGG+CGG | 0.755550 | 6_1:-357792 | None:intergenic |
TTGAAGAACATGTAGCTGTG+GGG | 0.767979 | 6_1:-357942 | None:intergenic |
CAGGGTGAAGAGGAACACGA+CGG | 0.776987 | 6_1:+358801 | Msa0867490:CDS |
TCATTGGCGAAAGATAGTGA+TGG | 0.785439 | 6_1:-358719 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTCTAAATTCAAGTTATGTA+GGG | + | chr6_1:357287-357306 | Msa0867490:CDS | 20.0% |
!!! | TTCTAAATTCAAGTTATGTA+GGG | + | chr6_1:357287-357306 | Msa0867490:CDS | 20.0% |
!! | AAAACTGATAAAGCATTCTT+GGG | + | chr6_1:357009-357028 | Msa0867490:intron | 25.0% |
! | ATGGAAATGGGAAAATTTAA+TGG | + | chr6_1:357045-357064 | Msa0867490:intron | 25.0% |
!! | TTGAATTTAGAACAGAGTTA+TGG | - | chr6_1:357279-357298 | None:intergenic | 25.0% |
!! | GTTCTAAATTCAAGTTATGT+AGG | + | chr6_1:357286-357305 | Msa0867490:CDS | 25.0% |
!! | TCTAAATTCAAGTTATGTAG+GGG | + | chr6_1:357288-357307 | Msa0867490:CDS | 25.0% |
! | TCTAAATCTAGATATTGTTG+TGG | - | chr6_1:357448-357467 | None:intergenic | 25.0% |
! | AAACAAATGAAATGTTTCAC+CGG | + | chr6_1:357989-358008 | Msa0867490:CDS | 25.0% |
!! | AAAACTGATAAAGCATTCTT+GGG | + | chr6_1:357009-357028 | Msa0867490:intron | 25.0% |
! | ATGGAAATGGGAAAATTTAA+TGG | + | chr6_1:357045-357064 | Msa0867490:intron | 25.0% |
!! | TTGAATTTAGAACAGAGTTA+TGG | - | chr6_1:357279-357298 | None:intergenic | 25.0% |
!! | GTTCTAAATTCAAGTTATGT+AGG | + | chr6_1:357286-357305 | Msa0867490:CDS | 25.0% |
!! | TCTAAATTCAAGTTATGTAG+GGG | + | chr6_1:357288-357307 | Msa0867490:CDS | 25.0% |
! | TCTAAATCTAGATATTGTTG+TGG | - | chr6_1:357448-357467 | None:intergenic | 25.0% |
! | AAACAAATGAAATGTTTCAC+CGG | + | chr6_1:357989-358008 | Msa0867490:CDS | 25.0% |
! | CAAAACTGATAAAGCATTCT+TGG | + | chr6_1:357008-357027 | Msa0867490:intron | 30.0% |
! | AATTTAATGGCAGCAAGTTT+TGG | + | chr6_1:357058-357077 | Msa0867490:intron | 30.0% |
! | ATTTAATGGCAGCAAGTTTT+GGG | + | chr6_1:357059-357078 | Msa0867490:intron | 30.0% |
GAACAACACTACTAAATCAA+TGG | - | chr6_1:357137-357156 | None:intergenic | 30.0% | |
!! | TGATGATGATGATTTGTTCT+GGG | - | chr6_1:357211-357230 | None:intergenic | 30.0% |
!! | ATGATGATGATGATTTGTTC+TGG | - | chr6_1:357212-357231 | None:intergenic | 30.0% |
ATCGAATATGCAAGAAAGAT+GGG | + | chr6_1:357556-357575 | Msa0867490:CDS | 30.0% | |
! | CAAAACTGATAAAGCATTCT+TGG | + | chr6_1:357008-357027 | Msa0867490:intron | 30.0% |
! | AATTTAATGGCAGCAAGTTT+TGG | + | chr6_1:357058-357077 | Msa0867490:intron | 30.0% |
! | ATTTAATGGCAGCAAGTTTT+GGG | + | chr6_1:357059-357078 | Msa0867490:intron | 30.0% |
GAACAACACTACTAAATCAA+TGG | - | chr6_1:357137-357156 | None:intergenic | 30.0% | |
!! | TGATGATGATGATTTGTTCT+GGG | - | chr6_1:357211-357230 | None:intergenic | 30.0% |
!! | ATGATGATGATGATTTGTTC+TGG | - | chr6_1:357212-357231 | None:intergenic | 30.0% |
ATCGAATATGCAAGAAAGAT+GGG | + | chr6_1:357556-357575 | Msa0867490:CDS | 30.0% | |
! | TGATAAAGCATTCTTGGGTT+TGG | + | chr6_1:357014-357033 | Msa0867490:intron | 35.0% |
ACAACTAGAGTGTGAGAAAA+AGG | + | chr6_1:357104-357123 | Msa0867490:intron | 35.0% | |
GAAGAAGATAAGCAGAACAA+GGG | + | chr6_1:357169-357188 | Msa0867490:intron | 35.0% | |
!!! | CTTGTTGGTTTTGTTGATGT+GGG | - | chr6_1:357246-357265 | None:intergenic | 35.0% |
!!! | TCTTGTTGGTTTTGTTGATG+TGG | - | chr6_1:357247-357266 | None:intergenic | 35.0% |
GGTGATGAAAATGAAAGGTT+GGG | - | chr6_1:357411-357430 | None:intergenic | 35.0% | |
TGTTGTGGTTGTTGAAAGTA+GGG | - | chr6_1:357433-357452 | None:intergenic | 35.0% | |
TTGTTGTGGTTGTTGAAAGT+AGG | - | chr6_1:357434-357453 | None:intergenic | 35.0% | |
! | ATGGAAGAGAATGATAGTGT+TGG | - | chr6_1:357538-357557 | None:intergenic | 35.0% |
CATCTTTCTTGCATATTCGA+TGG | - | chr6_1:357557-357576 | None:intergenic | 35.0% | |
CATCGAATATGCAAGAAAGA+TGG | + | chr6_1:357555-357574 | Msa0867490:CDS | 35.0% | |
! | GAAGGAAATTGTTGTTCTTG+TGG | - | chr6_1:358090-358109 | None:intergenic | 35.0% |
! | TATCTCCAACTGTTGTTGTT+GGG | - | chr6_1:358112-358131 | None:intergenic | 35.0% |
CTTGAAAAGATTGCAATGAG+AGG | - | chr6_1:358320-358339 | None:intergenic | 35.0% | |
CATCAAGAGGAACATGATAA+CGG | + | chr6_1:358468-358487 | Msa0867490:CDS | 35.0% | |
!!! | ATGGTCAGTTTTTTACTCAG+AGG | + | chr6_1:358613-358632 | Msa0867490:CDS | 35.0% |
!!! | TGGTCAGTTTTTTACTCAGA+GGG | + | chr6_1:358614-358633 | Msa0867490:CDS | 35.0% |
! | TGATAAAGCATTCTTGGGTT+TGG | + | chr6_1:357014-357033 | Msa0867490:intron | 35.0% |
ACAACTAGAGTGTGAGAAAA+AGG | + | chr6_1:357104-357123 | Msa0867490:intron | 35.0% | |
GAAGAAGATAAGCAGAACAA+GGG | + | chr6_1:357169-357188 | Msa0867490:intron | 35.0% | |
!!! | CTTGTTGGTTTTGTTGATGT+GGG | - | chr6_1:357246-357265 | None:intergenic | 35.0% |
!!! | TCTTGTTGGTTTTGTTGATG+TGG | - | chr6_1:357247-357266 | None:intergenic | 35.0% |
GGTGATGAAAATGAAAGGTT+GGG | - | chr6_1:357411-357430 | None:intergenic | 35.0% | |
TGTTGTGGTTGTTGAAAGTA+GGG | - | chr6_1:357433-357452 | None:intergenic | 35.0% | |
TTGTTGTGGTTGTTGAAAGT+AGG | - | chr6_1:357434-357453 | None:intergenic | 35.0% | |
! | ATGGAAGAGAATGATAGTGT+TGG | - | chr6_1:357538-357557 | None:intergenic | 35.0% |
CATCTTTCTTGCATATTCGA+TGG | - | chr6_1:357557-357576 | None:intergenic | 35.0% | |
CATCGAATATGCAAGAAAGA+TGG | + | chr6_1:357555-357574 | Msa0867490:CDS | 35.0% | |
! | GAAGGAAATTGTTGTTCTTG+TGG | - | chr6_1:358090-358109 | None:intergenic | 35.0% |
! | TATCTCCAACTGTTGTTGTT+GGG | - | chr6_1:358112-358131 | None:intergenic | 35.0% |
CTTGAAAAGATTGCAATGAG+AGG | - | chr6_1:358320-358339 | None:intergenic | 35.0% | |
CATCAAGAGGAACATGATAA+CGG | + | chr6_1:358468-358487 | Msa0867490:CDS | 35.0% | |
!!! | ATGGTCAGTTTTTTACTCAG+AGG | + | chr6_1:358613-358632 | Msa0867490:CDS | 35.0% |
!!! | TGGTCAGTTTTTTACTCAGA+GGG | + | chr6_1:358614-358633 | Msa0867490:CDS | 35.0% |
! | TAAAGCATTCTTGGGTTTGG+TGG | + | chr6_1:357017-357036 | Msa0867490:intron | 40.0% |
!! | TTTGGTGGTGATGATGGAAA+TGG | + | chr6_1:357032-357051 | Msa0867490:intron | 40.0% |
!! | TTGGTGGTGATGATGGAAAT+GGG | + | chr6_1:357033-357052 | Msa0867490:intron | 40.0% |
! | AGTGTTGTTCTGTTGAAAGC+TGG | + | chr6_1:357147-357166 | Msa0867490:intron | 40.0% |
GGAAGAAGATAAGCAGAACA+AGG | + | chr6_1:357168-357187 | Msa0867490:intron | 40.0% | |
!! | TGATGATGATTTGTTCTGGG+AGG | - | chr6_1:357208-357227 | None:intergenic | 40.0% |
TGTTGATGTGGGTGATAAAG+AGG | - | chr6_1:357235-357254 | None:intergenic | 40.0% | |
! | GAACAGAGTTATGGTGATGA+GGG | - | chr6_1:357270-357289 | None:intergenic | 40.0% |
! | AGAACAGAGTTATGGTGATG+AGG | - | chr6_1:357271-357290 | None:intergenic | 40.0% |
GAAAATGAAAGGTTGGGTCT+TGG | - | chr6_1:357405-357424 | None:intergenic | 40.0% | |
GGGTGATGAAAATGAAAGGT+TGG | - | chr6_1:357412-357431 | None:intergenic | 40.0% | |
GTAGGGGTGATGAAAATGAA+AGG | - | chr6_1:357416-357435 | None:intergenic | 40.0% | |
GTTGTGGTTGTTGAAAGTAG+GGG | - | chr6_1:357432-357451 | None:intergenic | 40.0% | |
!!! | TGTGGTAGTGGTCGTTTTTT+TGG | - | chr6_1:357496-357515 | None:intergenic | 40.0% |
! | GAAGAGAATGATAGTGTTGG+TGG | - | chr6_1:357535-357554 | None:intergenic | 40.0% |
GTAGAATTGAATCGCAGTGT+GGG | - | chr6_1:357815-357834 | None:intergenic | 40.0% | |
TTGAAGAACATGTAGCTGTG+GGG | - | chr6_1:357945-357964 | None:intergenic | 40.0% | |
GTTGAAGAACATGTAGCTGT+GGG | - | chr6_1:357946-357965 | None:intergenic | 40.0% | |
TGTTGAAGAACATGTAGCTG+TGG | - | chr6_1:357947-357966 | None:intergenic | 40.0% | |
! | GGAAATTGTTGTTCTTGTGG+TGG | - | chr6_1:358087-358106 | None:intergenic | 40.0% |
CTATCTCCAACTGTTGTTGT+TGG | - | chr6_1:358113-358132 | None:intergenic | 40.0% | |
ACTACAACAGTAGTAGCAGT+GGG | + | chr6_1:358133-358152 | Msa0867490:CDS | 40.0% | |
! | GGGAAACATGGTTTTCTTCA+AGG | + | chr6_1:358153-358172 | Msa0867490:CDS | 40.0% |
GAAAAGATTGCAATGAGAGG+CGG | - | chr6_1:358317-358336 | None:intergenic | 40.0% | |
! | AAAGCACTTGGTTGTTGTTG+TGG | - | chr6_1:358380-358399 | None:intergenic | 40.0% |
GATTGCATAGAATGATGGCT+TGG | + | chr6_1:358493-358512 | Msa0867490:CDS | 40.0% | |
GTTAATGCTAATGCTGCAGA+TGG | + | chr6_1:358528-358547 | Msa0867490:CDS | 40.0% | |
TGGATTTGTGTTCAGTACAC+CGG | + | chr6_1:358572-358591 | Msa0867490:CDS | 40.0% | |
!!! | GGTCAGTTTTTTACTCAGAG+GGG | + | chr6_1:358615-358634 | Msa0867490:CDS | 40.0% |
AGGATTGTAACTGGACTGAA+GGG | - | chr6_1:358643-358662 | None:intergenic | 40.0% | |
AAGGATTGTAACTGGACTGA+AGG | - | chr6_1:358644-358663 | None:intergenic | 40.0% | |
ACGAACTGAAGGATTGTAAC+TGG | - | chr6_1:358652-358671 | None:intergenic | 40.0% | |
TGCTTGGATAGATCCTTCAA+TGG | + | chr6_1:358671-358690 | Msa0867490:CDS | 40.0% | |
TCATTGGCGAAAGATAGTGA+TGG | - | chr6_1:358722-358741 | None:intergenic | 40.0% | |
! | TAAAGCATTCTTGGGTTTGG+TGG | + | chr6_1:357017-357036 | Msa0867490:intron | 40.0% |
!! | TTTGGTGGTGATGATGGAAA+TGG | + | chr6_1:357032-357051 | Msa0867490:intron | 40.0% |
!! | TTGGTGGTGATGATGGAAAT+GGG | + | chr6_1:357033-357052 | Msa0867490:intron | 40.0% |
! | AGTGTTGTTCTGTTGAAAGC+TGG | + | chr6_1:357147-357166 | Msa0867490:intron | 40.0% |
GGAAGAAGATAAGCAGAACA+AGG | + | chr6_1:357168-357187 | Msa0867490:intron | 40.0% | |
!! | TGATGATGATTTGTTCTGGG+AGG | - | chr6_1:357208-357227 | None:intergenic | 40.0% |
TGTTGATGTGGGTGATAAAG+AGG | - | chr6_1:357235-357254 | None:intergenic | 40.0% | |
! | GAACAGAGTTATGGTGATGA+GGG | - | chr6_1:357270-357289 | None:intergenic | 40.0% |
! | AGAACAGAGTTATGGTGATG+AGG | - | chr6_1:357271-357290 | None:intergenic | 40.0% |
GAAAATGAAAGGTTGGGTCT+TGG | - | chr6_1:357405-357424 | None:intergenic | 40.0% | |
GGGTGATGAAAATGAAAGGT+TGG | - | chr6_1:357412-357431 | None:intergenic | 40.0% | |
GTAGGGGTGATGAAAATGAA+AGG | - | chr6_1:357416-357435 | None:intergenic | 40.0% | |
GTTGTGGTTGTTGAAAGTAG+GGG | - | chr6_1:357432-357451 | None:intergenic | 40.0% | |
!!! | TGTGGTAGTGGTCGTTTTTT+TGG | - | chr6_1:357496-357515 | None:intergenic | 40.0% |
! | GAAGAGAATGATAGTGTTGG+TGG | - | chr6_1:357535-357554 | None:intergenic | 40.0% |
GTAGAATTGAATCGCAGTGT+GGG | - | chr6_1:357815-357834 | None:intergenic | 40.0% | |
TTGAAGAACATGTAGCTGTG+GGG | - | chr6_1:357945-357964 | None:intergenic | 40.0% | |
GTTGAAGAACATGTAGCTGT+GGG | - | chr6_1:357946-357965 | None:intergenic | 40.0% | |
TGTTGAAGAACATGTAGCTG+TGG | - | chr6_1:357947-357966 | None:intergenic | 40.0% | |
! | GGAAATTGTTGTTCTTGTGG+TGG | - | chr6_1:358087-358106 | None:intergenic | 40.0% |
CTATCTCCAACTGTTGTTGT+TGG | - | chr6_1:358113-358132 | None:intergenic | 40.0% | |
ACTACAACAGTAGTAGCAGT+GGG | + | chr6_1:358133-358152 | Msa0867490:CDS | 40.0% | |
! | GGGAAACATGGTTTTCTTCA+AGG | + | chr6_1:358153-358172 | Msa0867490:CDS | 40.0% |
GAAAAGATTGCAATGAGAGG+CGG | - | chr6_1:358317-358336 | None:intergenic | 40.0% | |
! | AAAGCACTTGGTTGTTGTTG+TGG | - | chr6_1:358380-358399 | None:intergenic | 40.0% |
GATTGCATAGAATGATGGCT+TGG | + | chr6_1:358493-358512 | Msa0867490:CDS | 40.0% | |
GTTAATGCTAATGCTGCAGA+TGG | + | chr6_1:358528-358547 | Msa0867490:CDS | 40.0% | |
TGGATTTGTGTTCAGTACAC+CGG | + | chr6_1:358572-358591 | Msa0867490:CDS | 40.0% | |
!!! | GGTCAGTTTTTTACTCAGAG+GGG | + | chr6_1:358615-358634 | Msa0867490:CDS | 40.0% |
AGGATTGTAACTGGACTGAA+GGG | - | chr6_1:358643-358662 | None:intergenic | 40.0% | |
AAGGATTGTAACTGGACTGA+AGG | - | chr6_1:358644-358663 | None:intergenic | 40.0% | |
ACGAACTGAAGGATTGTAAC+TGG | - | chr6_1:358652-358671 | None:intergenic | 40.0% | |
TGCTTGGATAGATCCTTCAA+TGG | + | chr6_1:358671-358690 | Msa0867490:CDS | 40.0% | |
TCATTGGCGAAAGATAGTGA+TGG | - | chr6_1:358722-358741 | None:intergenic | 40.0% | |
!!! | GCAAGTTTTGGGTTTCACTG+TGG | + | chr6_1:357070-357089 | Msa0867490:intron | 45.0% |
!!! | AGTTTTGGGTTTCACTGTGG+TGG | + | chr6_1:357073-357092 | Msa0867490:intron | 45.0% |
! | TATGGTGATGAGGGTCTTGT+TGG | - | chr6_1:357261-357280 | None:intergenic | 45.0% |
!! | TGCAGGGGTTTTTCAGATGA+AGG | - | chr6_1:357349-357368 | None:intergenic | 45.0% |
! | TCATGATAGTGAGGATGCAG+GGG | - | chr6_1:357364-357383 | None:intergenic | 45.0% |
! | GTCATGATAGTGAGGATGCA+GGG | - | chr6_1:357365-357384 | None:intergenic | 45.0% |
!! | TGGTGTTGGTCATGATAGTG+AGG | - | chr6_1:357373-357392 | None:intergenic | 45.0% |
! | TTTGGTGGTTCAAGTGACTC+TGG | - | chr6_1:357478-357497 | None:intergenic | 45.0% |
!!! | GGTAGTGGTCGTTTTTTTGG+TGG | - | chr6_1:357493-357512 | None:intergenic | 45.0% |
!! | TTGGTGGTGGTGGTTGATTA+GGG | - | chr6_1:357519-357538 | None:intergenic | 45.0% |
!! | AATGATAGTGTTGGTGGTGG+TGG | - | chr6_1:357529-357548 | None:intergenic | 45.0% |
!! | GAGAATGATAGTGTTGGTGG+TGG | - | chr6_1:357532-357551 | None:intergenic | 45.0% |
CGGTGCATACTTTACTGTGA+CGG | - | chr6_1:357756-357775 | None:intergenic | 45.0% | |
AGTAAAGTATGCACCGCGAA+AGG | + | chr6_1:357760-357779 | Msa0867490:CDS | 45.0% | |
CGTAGAATTGAATCGCAGTG+TGG | - | chr6_1:357816-357835 | None:intergenic | 45.0% | |
AGCCAATCGACTGCTTTACT+TGG | - | chr6_1:357868-357887 | None:intergenic | 45.0% | |
AATGTTTCACCGGCAATCTC+CGG | + | chr6_1:357999-358018 | Msa0867490:CDS | 45.0% | |
GTTACTGGATTGTTGTCCAC+CGG | - | chr6_1:358021-358040 | None:intergenic | 45.0% | |
TCCTTCCCAACAACAACAGT+TGG | + | chr6_1:358104-358123 | Msa0867490:CDS | 45.0% | |
! | TCCAACTGTTGTTGTTGGGA+AGG | - | chr6_1:358108-358127 | None:intergenic | 45.0% |
GACTACAACAGTAGTAGCAG+TGG | + | chr6_1:358132-358151 | Msa0867490:CDS | 45.0% | |
AGTAGTAGCAGTGGGAAACA+TGG | + | chr6_1:358141-358160 | Msa0867490:CDS | 45.0% | |
TAACTGTGAAACGACGTCGT+GGG | - | chr6_1:358234-358253 | None:intergenic | 45.0% | |
ATAACTGTGAAACGACGTCG+TGG | - | chr6_1:358235-358254 | None:intergenic | 45.0% | |
TCACAGTTATCAACAACCGC+CGG | + | chr6_1:358245-358264 | Msa0867490:CDS | 45.0% | |
GTCGTTCGAGAGAGTAAATC+CGG | - | chr6_1:358267-358286 | None:intergenic | 45.0% | |
GGATTTACTCTCTCGAACGA+CGG | + | chr6_1:358266-358285 | Msa0867490:CDS | 45.0% | |
!! | TGGTGGCTCTGAAGCATAAT+AGG | - | chr6_1:358345-358364 | None:intergenic | 45.0% |
! | AACAACCAAGTGCTTTTCGC+CGG | + | chr6_1:358384-358403 | Msa0867490:CDS | 45.0% |
ATAACCAAGGGAGGAGTTTC+CGG | - | chr6_1:358406-358425 | None:intergenic | 45.0% | |
AACTCCTCCCTTGGTTATGA+CGG | + | chr6_1:358408-358427 | Msa0867490:CDS | 45.0% | |
CGGCAGATTGCATAGAATGA+TGG | + | chr6_1:358488-358507 | Msa0867490:CDS | 45.0% | |
AATGCTAATGCTGCAGATGG+TGG | + | chr6_1:358531-358550 | Msa0867490:CDS | 45.0% | |
TGAACACAAATCCAGCACCA+TGG | - | chr6_1:358566-358585 | None:intergenic | 45.0% | |
GGATTGTAACTGGACTGAAG+GGG | - | chr6_1:358642-358661 | None:intergenic | 45.0% | |
ACAATCCTTCAGTTCGTGCT+TGG | + | chr6_1:358655-358674 | Msa0867490:CDS | 45.0% | |
TCTATCCAAGCACGAACTGA+AGG | - | chr6_1:358663-358682 | None:intergenic | 45.0% | |
GATAGATCCTTCAATGGCGA+CGG | + | chr6_1:358677-358696 | Msa0867490:CDS | 45.0% | |
TTGGCGAAAGATAGTGATGG+TGG | - | chr6_1:358719-358738 | None:intergenic | 45.0% | |
TCTTTCGCCAATGATCCATC+AGG | + | chr6_1:358728-358747 | Msa0867490:CDS | 45.0% | |
! | ACAGAAGCCTGATGGATCAT+TGG | - | chr6_1:358738-358757 | None:intergenic | 45.0% |
TCGTATACCAGCACGAATTC+AGG | + | chr6_1:358782-358801 | Msa0867490:CDS | 45.0% | |
CGTATACCAGCACGAATTCA+GGG | + | chr6_1:358783-358802 | Msa0867490:CDS | 45.0% | |
!!! | GCAAGTTTTGGGTTTCACTG+TGG | + | chr6_1:357070-357089 | Msa0867490:intron | 45.0% |
!!! | AGTTTTGGGTTTCACTGTGG+TGG | + | chr6_1:357073-357092 | Msa0867490:intron | 45.0% |
! | TATGGTGATGAGGGTCTTGT+TGG | - | chr6_1:357261-357280 | None:intergenic | 45.0% |
!! | TGCAGGGGTTTTTCAGATGA+AGG | - | chr6_1:357349-357368 | None:intergenic | 45.0% |
! | TCATGATAGTGAGGATGCAG+GGG | - | chr6_1:357364-357383 | None:intergenic | 45.0% |
! | GTCATGATAGTGAGGATGCA+GGG | - | chr6_1:357365-357384 | None:intergenic | 45.0% |
!! | TGGTGTTGGTCATGATAGTG+AGG | - | chr6_1:357373-357392 | None:intergenic | 45.0% |
! | TTTGGTGGTTCAAGTGACTC+TGG | - | chr6_1:357478-357497 | None:intergenic | 45.0% |
!!! | GGTAGTGGTCGTTTTTTTGG+TGG | - | chr6_1:357493-357512 | None:intergenic | 45.0% |
!! | TTGGTGGTGGTGGTTGATTA+GGG | - | chr6_1:357519-357538 | None:intergenic | 45.0% |
!! | AATGATAGTGTTGGTGGTGG+TGG | - | chr6_1:357529-357548 | None:intergenic | 45.0% |
!! | GAGAATGATAGTGTTGGTGG+TGG | - | chr6_1:357532-357551 | None:intergenic | 45.0% |
CGGTGCATACTTTACTGTGA+CGG | - | chr6_1:357756-357775 | None:intergenic | 45.0% | |
AGTAAAGTATGCACCGCGAA+AGG | + | chr6_1:357760-357779 | Msa0867490:CDS | 45.0% | |
CGTAGAATTGAATCGCAGTG+TGG | - | chr6_1:357816-357835 | None:intergenic | 45.0% | |
AGCCAATCGACTGCTTTACT+TGG | - | chr6_1:357868-357887 | None:intergenic | 45.0% | |
AATGTTTCACCGGCAATCTC+CGG | + | chr6_1:357999-358018 | Msa0867490:CDS | 45.0% | |
GTTACTGGATTGTTGTCCAC+CGG | - | chr6_1:358021-358040 | None:intergenic | 45.0% | |
TCCTTCCCAACAACAACAGT+TGG | + | chr6_1:358104-358123 | Msa0867490:CDS | 45.0% | |
! | TCCAACTGTTGTTGTTGGGA+AGG | - | chr6_1:358108-358127 | None:intergenic | 45.0% |
GACTACAACAGTAGTAGCAG+TGG | + | chr6_1:358132-358151 | Msa0867490:CDS | 45.0% | |
AGTAGTAGCAGTGGGAAACA+TGG | + | chr6_1:358141-358160 | Msa0867490:CDS | 45.0% | |
TAACTGTGAAACGACGTCGT+GGG | - | chr6_1:358234-358253 | None:intergenic | 45.0% | |
ATAACTGTGAAACGACGTCG+TGG | - | chr6_1:358235-358254 | None:intergenic | 45.0% | |
TCACAGTTATCAACAACCGC+CGG | + | chr6_1:358245-358264 | Msa0867490:CDS | 45.0% | |
GTCGTTCGAGAGAGTAAATC+CGG | - | chr6_1:358267-358286 | None:intergenic | 45.0% | |
GGATTTACTCTCTCGAACGA+CGG | + | chr6_1:358266-358285 | Msa0867490:CDS | 45.0% | |
!! | TGGTGGCTCTGAAGCATAAT+AGG | - | chr6_1:358345-358364 | None:intergenic | 45.0% |
! | AACAACCAAGTGCTTTTCGC+CGG | + | chr6_1:358384-358403 | Msa0867490:CDS | 45.0% |
ATAACCAAGGGAGGAGTTTC+CGG | - | chr6_1:358406-358425 | None:intergenic | 45.0% | |
AACTCCTCCCTTGGTTATGA+CGG | + | chr6_1:358408-358427 | Msa0867490:CDS | 45.0% | |
CGGCAGATTGCATAGAATGA+TGG | + | chr6_1:358488-358507 | Msa0867490:CDS | 45.0% | |
AATGCTAATGCTGCAGATGG+TGG | + | chr6_1:358531-358550 | Msa0867490:CDS | 45.0% | |
TGAACACAAATCCAGCACCA+TGG | - | chr6_1:358566-358585 | None:intergenic | 45.0% | |
GGATTGTAACTGGACTGAAG+GGG | - | chr6_1:358642-358661 | None:intergenic | 45.0% | |
ACAATCCTTCAGTTCGTGCT+TGG | + | chr6_1:358655-358674 | Msa0867490:CDS | 45.0% | |
TCTATCCAAGCACGAACTGA+AGG | - | chr6_1:358663-358682 | None:intergenic | 45.0% | |
GATAGATCCTTCAATGGCGA+CGG | + | chr6_1:358677-358696 | Msa0867490:CDS | 45.0% | |
TTGGCGAAAGATAGTGATGG+TGG | - | chr6_1:358719-358738 | None:intergenic | 45.0% | |
TCTTTCGCCAATGATCCATC+AGG | + | chr6_1:358728-358747 | Msa0867490:CDS | 45.0% | |
! | ACAGAAGCCTGATGGATCAT+TGG | - | chr6_1:358738-358757 | None:intergenic | 45.0% |
TCGTATACCAGCACGAATTC+AGG | + | chr6_1:358782-358801 | Msa0867490:CDS | 45.0% | |
CGTATACCAGCACGAATTCA+GGG | + | chr6_1:358783-358802 | Msa0867490:CDS | 45.0% | |
!! | CTTGGGTTTGGTGGTGATGA+TGG | + | chr6_1:357026-357045 | Msa0867490:intron | 50.0% |
! | GGTCATGATAGTGAGGATGC+AGG | - | chr6_1:357366-357385 | None:intergenic | 50.0% |
!! | CTTGGTGTTGGTGTTGGTGT+TGG | - | chr6_1:357387-357406 | None:intergenic | 50.0% |
!! | TTGGGTCTTGGTGTTGGTGT+TGG | - | chr6_1:357393-357412 | None:intergenic | 50.0% |
! | GAAAGGTTGGGTCTTGGTGT+TGG | - | chr6_1:357399-357418 | None:intergenic | 50.0% |
GGTTCAAGTGACTCTGGTTG+TGG | - | chr6_1:357472-357491 | None:intergenic | 50.0% | |
GGTTGATTAGGGTGTGGTAG+TGG | - | chr6_1:357508-357527 | None:intergenic | 50.0% | |
!! | GTTGGTGGTGGTGGTTGATT+AGG | - | chr6_1:357520-357539 | None:intergenic | 50.0% |
ACCTCGTCCAAGAGAATCAG+CGG | + | chr6_1:357655-357674 | Msa0867490:CDS | 50.0% | |
! | GGAGAAATCGTGGAGGTACA+AGG | + | chr6_1:357697-357716 | Msa0867490:CDS | 50.0% |
! | GAAATCGTGGAGGTACAAGG+AGG | + | chr6_1:357700-357719 | Msa0867490:CDS | 50.0% |
GGTCACATTGTCCGTTCAAC+AGG | + | chr6_1:357721-357740 | Msa0867490:CDS | 50.0% | |
GGTCTTTGCGTCCTGTTGAA+CGG | - | chr6_1:357735-357754 | None:intergenic | 50.0% | |
TACGACGTGCAAGATCGTCT+CGG | + | chr6_1:357832-357851 | Msa0867490:CDS | 50.0% | |
AAGATCGTCTCGGCTATGAC+AGG | + | chr6_1:357842-357861 | Msa0867490:CDS | 50.0% | |
GGCCAAGTAAAGCAGTCGAT+TGG | + | chr6_1:357863-357882 | Msa0867490:CDS | 50.0% | |
TGACTGGTAGAAGCGGTTAC+TGG | - | chr6_1:358036-358055 | None:intergenic | 50.0% | |
GTTCGAGAGAGTAAATCCGG+CGG | - | chr6_1:358264-358283 | None:intergenic | 50.0% | |
TTTACTCTCTCGAACGACGG+CGG | + | chr6_1:358269-358288 | Msa0867490:CDS | 50.0% | |
!! | TGTTGTGGTGGTGGTTGTCA+TGG | - | chr6_1:358365-358384 | None:intergenic | 50.0% |
! | CTTGGTTGTTGTTGTGGTGG+TGG | - | chr6_1:358374-358393 | None:intergenic | 50.0% |
! | GCACTTGGTTGTTGTTGTGG+TGG | - | chr6_1:358377-358396 | None:intergenic | 50.0% |
!! | AGTTTCCGGCGAAAAGCACT+TGG | - | chr6_1:358392-358411 | None:intergenic | 50.0% |
TCCACCACCGTCATAACCAA+GGG | - | chr6_1:358418-358437 | None:intergenic | 50.0% | |
TTCCACCACCGTCATAACCA+AGG | - | chr6_1:358419-358438 | None:intergenic | 50.0% | |
ATATTCGCCGTCGCCATTGA+AGG | - | chr6_1:358687-358706 | None:intergenic | 50.0% | |
ATCCATCAGGCTTCTGTCTC+TGG | + | chr6_1:358741-358760 | Msa0867490:CDS | 50.0% | |
TCTTCACCCTGAATTCGTGC+TGG | - | chr6_1:358792-358811 | None:intergenic | 50.0% | |
AGCACGAATTCAGGGTGAAG+AGG | + | chr6_1:358791-358810 | Msa0867490:CDS | 50.0% | |
GGAAGCAGAGGACGGTTTAT+CGG | - | chr6_1:358832-358851 | None:intergenic | 50.0% | |
!! | CTTGGGTTTGGTGGTGATGA+TGG | + | chr6_1:357026-357045 | Msa0867490:intron | 50.0% |
! | GGTCATGATAGTGAGGATGC+AGG | - | chr6_1:357366-357385 | None:intergenic | 50.0% |
!! | CTTGGTGTTGGTGTTGGTGT+TGG | - | chr6_1:357387-357406 | None:intergenic | 50.0% |
!! | TTGGGTCTTGGTGTTGGTGT+TGG | - | chr6_1:357393-357412 | None:intergenic | 50.0% |
! | GAAAGGTTGGGTCTTGGTGT+TGG | - | chr6_1:357399-357418 | None:intergenic | 50.0% |
GGTTCAAGTGACTCTGGTTG+TGG | - | chr6_1:357472-357491 | None:intergenic | 50.0% | |
GGTTGATTAGGGTGTGGTAG+TGG | - | chr6_1:357508-357527 | None:intergenic | 50.0% | |
!! | GTTGGTGGTGGTGGTTGATT+AGG | - | chr6_1:357520-357539 | None:intergenic | 50.0% |
ACCTCGTCCAAGAGAATCAG+CGG | + | chr6_1:357655-357674 | Msa0867490:CDS | 50.0% | |
! | GGAGAAATCGTGGAGGTACA+AGG | + | chr6_1:357697-357716 | Msa0867490:CDS | 50.0% |
! | GAAATCGTGGAGGTACAAGG+AGG | + | chr6_1:357700-357719 | Msa0867490:CDS | 50.0% |
GGTCACATTGTCCGTTCAAC+AGG | + | chr6_1:357721-357740 | Msa0867490:CDS | 50.0% | |
GGTCTTTGCGTCCTGTTGAA+CGG | - | chr6_1:357735-357754 | None:intergenic | 50.0% | |
TACGACGTGCAAGATCGTCT+CGG | + | chr6_1:357832-357851 | Msa0867490:CDS | 50.0% | |
AAGATCGTCTCGGCTATGAC+AGG | + | chr6_1:357842-357861 | Msa0867490:CDS | 50.0% | |
GGCCAAGTAAAGCAGTCGAT+TGG | + | chr6_1:357863-357882 | Msa0867490:CDS | 50.0% | |
TGACTGGTAGAAGCGGTTAC+TGG | - | chr6_1:358036-358055 | None:intergenic | 50.0% | |
GTTCGAGAGAGTAAATCCGG+CGG | - | chr6_1:358264-358283 | None:intergenic | 50.0% | |
TTTACTCTCTCGAACGACGG+CGG | + | chr6_1:358269-358288 | Msa0867490:CDS | 50.0% | |
!! | TGTTGTGGTGGTGGTTGTCA+TGG | - | chr6_1:358365-358384 | None:intergenic | 50.0% |
! | CTTGGTTGTTGTTGTGGTGG+TGG | - | chr6_1:358374-358393 | None:intergenic | 50.0% |
! | GCACTTGGTTGTTGTTGTGG+TGG | - | chr6_1:358377-358396 | None:intergenic | 50.0% |
!! | AGTTTCCGGCGAAAAGCACT+TGG | - | chr6_1:358392-358411 | None:intergenic | 50.0% |
TCCACCACCGTCATAACCAA+GGG | - | chr6_1:358418-358437 | None:intergenic | 50.0% | |
TTCCACCACCGTCATAACCA+AGG | - | chr6_1:358419-358438 | None:intergenic | 50.0% | |
ATATTCGCCGTCGCCATTGA+AGG | - | chr6_1:358687-358706 | None:intergenic | 50.0% | |
ATCCATCAGGCTTCTGTCTC+TGG | + | chr6_1:358741-358760 | Msa0867490:CDS | 50.0% | |
TCTTCACCCTGAATTCGTGC+TGG | - | chr6_1:358792-358811 | None:intergenic | 50.0% | |
AGCACGAATTCAGGGTGAAG+AGG | + | chr6_1:358791-358810 | Msa0867490:CDS | 50.0% | |
GGAAGCAGAGGACGGTTTAT+CGG | - | chr6_1:358832-358851 | None:intergenic | 50.0% | |
GCAGAACAAGGGTCTGAGTC+TGG | + | chr6_1:357180-357199 | Msa0867490:CDS | 55.0% | |
! | GGTGGTGGTTGATTAGGGTG+TGG | - | chr6_1:357514-357533 | None:intergenic | 55.0% |
ACAACACACGACCAGCACAC+AGG | + | chr6_1:357583-357602 | Msa0867490:CDS | 55.0% | |
! | CTGTTGCTGTTCCTGTGTGC+TGG | - | chr6_1:357597-357616 | None:intergenic | 55.0% |
TCCAAGAGAATCAGCGGCAG+CGG | + | chr6_1:357661-357680 | Msa0867490:CDS | 55.0% | |
AGGAGGAGGAGGAGAAATCG+TGG | + | chr6_1:357687-357706 | Msa0867490:CDS | 55.0% | |
AGGAGGAGGAGAAATCGTGG+AGG | + | chr6_1:357690-357709 | Msa0867490:CDS | 55.0% | |
TGTAGCTGTGGGGTTCCAAG+CGG | - | chr6_1:357935-357954 | None:intergenic | 55.0% | |
TGTTGTCCACCGGAGATTGC+CGG | - | chr6_1:358011-358030 | None:intergenic | 55.0% | |
TGAGCGGTGACTGGTAGAAG+CGG | - | chr6_1:358043-358062 | None:intergenic | 55.0% | |
TTCTACCAGTCACCGCTCAG+CGG | + | chr6_1:358044-358063 | Msa0867490:CDS | 55.0% | |
TTCGCTCTAATGCCGCTGAG+CGG | - | chr6_1:358059-358078 | None:intergenic | 55.0% | |
!! | TGTGGTGGTGGTTGTCATGG+TGG | - | chr6_1:358362-358381 | None:intergenic | 55.0% |
TCCTCCCTTGGTTATGACGG+TGG | + | chr6_1:358411-358430 | Msa0867490:CDS | 55.0% | |
ACCACCGTCATAACCAAGGG+AGG | - | chr6_1:358415-358434 | None:intergenic | 55.0% | |
TCCCTTGGTTATGACGGTGG+TGG | + | chr6_1:358414-358433 | Msa0867490:CDS | 55.0% | |
!! | GGTTATGACGGTGGTGGAAG+TGG | + | chr6_1:358420-358439 | Msa0867490:CDS | 55.0% |
!! | GTGGAAGTGGAAGCACCTTG+TGG | + | chr6_1:358433-358452 | Msa0867490:CDS | 55.0% |
ATGCTGCTGCTCAGACCACA+AGG | - | chr6_1:358451-358470 | None:intergenic | 55.0% | |
GTCTGAGCAGCAGCATCAAG+AGG | + | chr6_1:358455-358474 | Msa0867490:CDS | 55.0% | |
! | GCTGCAGATGGTGGTAACAG+TGG | + | chr6_1:358540-358559 | Msa0867490:CDS | 55.0% |
! | GATGGTGGTAACAGTGGCCA+TGG | + | chr6_1:358546-358565 | Msa0867490:CDS | 55.0% |
TGTGTTCAGTACACCGGCAC+AGG | + | chr6_1:358578-358597 | Msa0867490:CDS | 55.0% | |
CACCAGAGACAGAAGCCTGA+TGG | - | chr6_1:358746-358765 | None:intergenic | 55.0% | |
CATCAGGCTTCTGTCTCTGG+TGG | + | chr6_1:358744-358763 | Msa0867490:CDS | 55.0% | |
!! | GTCTCTGGTGGTGGATTCTC+AGG | + | chr6_1:358756-358775 | Msa0867490:CDS | 55.0% |
CAGGGTGAAGAGGAACACGA+CGG | + | chr6_1:358801-358820 | Msa0867490:CDS | 55.0% | |
GCAGAACAAGGGTCTGAGTC+TGG | + | chr6_1:357180-357199 | Msa0867490:CDS | 55.0% | |
! | GGTGGTGGTTGATTAGGGTG+TGG | - | chr6_1:357514-357533 | None:intergenic | 55.0% |
ACAACACACGACCAGCACAC+AGG | + | chr6_1:357583-357602 | Msa0867490:CDS | 55.0% | |
! | CTGTTGCTGTTCCTGTGTGC+TGG | - | chr6_1:357597-357616 | None:intergenic | 55.0% |
TCCAAGAGAATCAGCGGCAG+CGG | + | chr6_1:357661-357680 | Msa0867490:CDS | 55.0% | |
AGGAGGAGGAGGAGAAATCG+TGG | + | chr6_1:357687-357706 | Msa0867490:CDS | 55.0% | |
AGGAGGAGGAGAAATCGTGG+AGG | + | chr6_1:357690-357709 | Msa0867490:CDS | 55.0% | |
TGTAGCTGTGGGGTTCCAAG+CGG | - | chr6_1:357935-357954 | None:intergenic | 55.0% | |
TGTTGTCCACCGGAGATTGC+CGG | - | chr6_1:358011-358030 | None:intergenic | 55.0% | |
TGAGCGGTGACTGGTAGAAG+CGG | - | chr6_1:358043-358062 | None:intergenic | 55.0% | |
TTCTACCAGTCACCGCTCAG+CGG | + | chr6_1:358044-358063 | Msa0867490:CDS | 55.0% | |
TTCGCTCTAATGCCGCTGAG+CGG | - | chr6_1:358059-358078 | None:intergenic | 55.0% | |
!! | TGTGGTGGTGGTTGTCATGG+TGG | - | chr6_1:358362-358381 | None:intergenic | 55.0% |
TCCTCCCTTGGTTATGACGG+TGG | + | chr6_1:358411-358430 | Msa0867490:CDS | 55.0% | |
ACCACCGTCATAACCAAGGG+AGG | - | chr6_1:358415-358434 | None:intergenic | 55.0% | |
TCCCTTGGTTATGACGGTGG+TGG | + | chr6_1:358414-358433 | Msa0867490:CDS | 55.0% | |
!! | GGTTATGACGGTGGTGGAAG+TGG | + | chr6_1:358420-358439 | Msa0867490:CDS | 55.0% |
!! | GTGGAAGTGGAAGCACCTTG+TGG | + | chr6_1:358433-358452 | Msa0867490:CDS | 55.0% |
ATGCTGCTGCTCAGACCACA+AGG | - | chr6_1:358451-358470 | None:intergenic | 55.0% | |
GTCTGAGCAGCAGCATCAAG+AGG | + | chr6_1:358455-358474 | Msa0867490:CDS | 55.0% | |
! | GCTGCAGATGGTGGTAACAG+TGG | + | chr6_1:358540-358559 | Msa0867490:CDS | 55.0% |
! | GATGGTGGTAACAGTGGCCA+TGG | + | chr6_1:358546-358565 | Msa0867490:CDS | 55.0% |
TGTGTTCAGTACACCGGCAC+AGG | + | chr6_1:358578-358597 | Msa0867490:CDS | 55.0% | |
CACCAGAGACAGAAGCCTGA+TGG | - | chr6_1:358746-358765 | None:intergenic | 55.0% | |
CATCAGGCTTCTGTCTCTGG+TGG | + | chr6_1:358744-358763 | Msa0867490:CDS | 55.0% | |
!! | GTCTCTGGTGGTGGATTCTC+AGG | + | chr6_1:358756-358775 | Msa0867490:CDS | 55.0% |
CAGGGTGAAGAGGAACACGA+CGG | + | chr6_1:358801-358820 | Msa0867490:CDS | 55.0% | |
!! | GCCGCTGATTCTCTTGGACG+AGG | - | chr6_1:357659-357678 | None:intergenic | 60.0% |
!! | TCCGCTGCCGCTGATTCTCT+TGG | - | chr6_1:357665-357684 | None:intergenic | 60.0% |
AAGAGAATCAGCGGCAGCGG+AGG | + | chr6_1:357664-357683 | Msa0867490:CDS | 60.0% | |
! | TGTGGGCTGAGAGTCGTACG+CGG | - | chr6_1:357798-357817 | None:intergenic | 60.0% |
TAGCTGTGGGGTTCCAAGCG+GGG | - | chr6_1:357933-357952 | None:intergenic | 60.0% | |
GTAGCTGTGGGGTTCCAAGC+GGG | - | chr6_1:357934-357953 | None:intergenic | 60.0% | |
GTTTCACCGGCAATCTCCGG+TGG | + | chr6_1:358002-358021 | Msa0867490:CDS | 60.0% | |
TAATGCCGCTGAGCGGTGAC+TGG | - | chr6_1:358052-358071 | None:intergenic | 60.0% | |
GACGTCGTGGGCGTTTCAAC+TGG | - | chr6_1:358222-358241 | None:intergenic | 60.0% | |
GAGGCGGAGATCTTGCTGCT+GGG | - | chr6_1:358301-358320 | None:intergenic | 60.0% | |
AGAGGCGGAGATCTTGCTGC+TGG | - | chr6_1:358302-358321 | None:intergenic | 60.0% | |
TTCGCCGGAAACTCCTCCCT+TGG | + | chr6_1:358399-358418 | Msa0867490:CDS | 60.0% | |
GGTAACAGTGGCCATGGTGC+TGG | + | chr6_1:358552-358571 | Msa0867490:CDS | 60.0% | |
AGTACACCGGCACAGGCGTT+TGG | + | chr6_1:358585-358604 | Msa0867490:CDS | 60.0% | |
TAACCGCCAAACGCCTGTGC+CGG | - | chr6_1:358594-358613 | None:intergenic | 60.0% | |
GCACAGGCGTTTGGCGGTTA+TGG | + | chr6_1:358594-358613 | Msa0867490:CDS | 60.0% | |
CAGGCTTCTGTCTCTGGTGG+TGG | + | chr6_1:358747-358766 | Msa0867490:CDS | 60.0% | |
GAGTCGGAGGAAGCAGAGGA+CGG | - | chr6_1:358840-358859 | None:intergenic | 60.0% | |
!! | GCCGCTGATTCTCTTGGACG+AGG | - | chr6_1:357659-357678 | None:intergenic | 60.0% |
!! | TCCGCTGCCGCTGATTCTCT+TGG | - | chr6_1:357665-357684 | None:intergenic | 60.0% |
AAGAGAATCAGCGGCAGCGG+AGG | + | chr6_1:357664-357683 | Msa0867490:CDS | 60.0% | |
! | TGTGGGCTGAGAGTCGTACG+CGG | - | chr6_1:357798-357817 | None:intergenic | 60.0% |
TAGCTGTGGGGTTCCAAGCG+GGG | - | chr6_1:357933-357952 | None:intergenic | 60.0% | |
GTAGCTGTGGGGTTCCAAGC+GGG | - | chr6_1:357934-357953 | None:intergenic | 60.0% | |
GTTTCACCGGCAATCTCCGG+TGG | + | chr6_1:358002-358021 | Msa0867490:CDS | 60.0% | |
TAATGCCGCTGAGCGGTGAC+TGG | - | chr6_1:358052-358071 | None:intergenic | 60.0% | |
GACGTCGTGGGCGTTTCAAC+TGG | - | chr6_1:358222-358241 | None:intergenic | 60.0% | |
GAGGCGGAGATCTTGCTGCT+GGG | - | chr6_1:358301-358320 | None:intergenic | 60.0% | |
AGAGGCGGAGATCTTGCTGC+TGG | - | chr6_1:358302-358321 | None:intergenic | 60.0% | |
TTCGCCGGAAACTCCTCCCT+TGG | + | chr6_1:358399-358418 | Msa0867490:CDS | 60.0% | |
GGTAACAGTGGCCATGGTGC+TGG | + | chr6_1:358552-358571 | Msa0867490:CDS | 60.0% | |
AGTACACCGGCACAGGCGTT+TGG | + | chr6_1:358585-358604 | Msa0867490:CDS | 60.0% | |
TAACCGCCAAACGCCTGTGC+CGG | - | chr6_1:358594-358613 | None:intergenic | 60.0% | |
GCACAGGCGTTTGGCGGTTA+TGG | + | chr6_1:358594-358613 | Msa0867490:CDS | 60.0% | |
CAGGCTTCTGTCTCTGGTGG+TGG | + | chr6_1:358747-358766 | Msa0867490:CDS | 60.0% | |
GAGTCGGAGGAAGCAGAGGA+CGG | - | chr6_1:358840-358859 | None:intergenic | 60.0% | |
AGAATCAGCGGCAGCGGAGG+AGG | + | chr6_1:357667-357686 | Msa0867490:CDS | 65.0% | |
AGAGTCGTACGCGGCGGTCA+CGG | - | chr6_1:357789-357808 | None:intergenic | 65.0% | |
AACTCGCTCACCTCCCCGCT+TGG | + | chr6_1:357917-357936 | Msa0867490:CDS | 65.0% | |
TGCTGCTGCTGCTGCTGCTG+TGG | - | chr6_1:357970-357989 | None:intergenic | 65.0% | |
GCGGAGATCTTGCTGCTGGG+TGG | - | chr6_1:358298-358317 | None:intergenic | 65.0% | |
ACACCGGCACAGGCGTTTGG+CGG | + | chr6_1:358588-358607 | Msa0867490:CDS | 65.0% | |
GCGAGAGTCGGAGGAAGCAG+AGG | - | chr6_1:358844-358863 | None:intergenic | 65.0% | |
AGAATCAGCGGCAGCGGAGG+AGG | + | chr6_1:357667-357686 | Msa0867490:CDS | 65.0% | |
AGAGTCGTACGCGGCGGTCA+CGG | - | chr6_1:357789-357808 | None:intergenic | 65.0% | |
AACTCGCTCACCTCCCCGCT+TGG | + | chr6_1:357917-357936 | Msa0867490:CDS | 65.0% | |
TGCTGCTGCTGCTGCTGCTG+TGG | - | chr6_1:357970-357989 | None:intergenic | 65.0% | |
GCGGAGATCTTGCTGCTGGG+TGG | - | chr6_1:358298-358317 | None:intergenic | 65.0% | |
ACACCGGCACAGGCGTTTGG+CGG | + | chr6_1:358588-358607 | Msa0867490:CDS | 65.0% | |
GCGAGAGTCGGAGGAAGCAG+AGG | - | chr6_1:358844-358863 | None:intergenic | 65.0% | |
ATCAGCGGCAGCGGAGGAGG+AGG | + | chr6_1:357670-357689 | Msa0867490:CDS | 70.0% | |
GCGGTCACGGGGACCTTTCG+CGG | - | chr6_1:357776-357795 | None:intergenic | 70.0% | |
AGTCGTACGCGGCGGTCACG+GGG | - | chr6_1:357787-357806 | None:intergenic | 70.0% | |
GAGTCGTACGCGGCGGTCAC+GGG | - | chr6_1:357788-357807 | None:intergenic | 70.0% | |
GGGCTGAGAGTCGTACGCGG+CGG | - | chr6_1:357795-357814 | None:intergenic | 70.0% | |
CTGTGGGGTTCCAAGCGGGG+AGG | - | chr6_1:357930-357949 | None:intergenic | 70.0% | |
ATCAGCGGCAGCGGAGGAGG+AGG | + | chr6_1:357670-357689 | Msa0867490:CDS | 70.0% | |
GCGGTCACGGGGACCTTTCG+CGG | - | chr6_1:357776-357795 | None:intergenic | 70.0% | |
AGTCGTACGCGGCGGTCACG+GGG | - | chr6_1:357787-357806 | None:intergenic | 70.0% | |
GAGTCGTACGCGGCGGTCAC+GGG | - | chr6_1:357788-357807 | None:intergenic | 70.0% | |
GGGCTGAGAGTCGTACGCGG+CGG | - | chr6_1:357795-357814 | None:intergenic | 70.0% | |
CTGTGGGGTTCCAAGCGGGG+AGG | - | chr6_1:357930-357949 | None:intergenic | 70.0% | |
AGCGGCAGCGGAGGAGGAGG+AGG | + | chr6_1:357673-357692 | Msa0867490:CDS | 75.0% | |
GGCAGCGGAGGAGGAGGAGG+AGG | + | chr6_1:357676-357695 | Msa0867490:CDS | 75.0% | |
AGCGGCAGCGGAGGAGGAGG+AGG | + | chr6_1:357673-357692 | Msa0867490:CDS | 75.0% | |
GGCAGCGGAGGAGGAGGAGG+AGG | + | chr6_1:357676-357695 | Msa0867490:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_1 | gene | 356996 | 358869 | 356996 | ID=Msa0867490;Name=Msa0867490 |
chr6_1 | mRNA | 356996 | 358869 | 356996 | ID=Msa0867490-mRNA-1;Parent=Msa0867490;Name=Msa0867490-mRNA-1;_AED=0.19;_eAED=0.39;_QI=0|0|0|1|1|1|2|0|566 |
chr6_1 | exon | 356996 | 356999 | 356996 | ID=Msa0867490-mRNA-1:exon:154;Parent=Msa0867490-mRNA-1 |
chr6_1 | exon | 357173 | 358869 | 357173 | ID=Msa0867490-mRNA-1:exon:155;Parent=Msa0867490-mRNA-1 |
chr6_1 | CDS | 356996 | 356999 | 356996 | ID=Msa0867490-mRNA-1:cds;Parent=Msa0867490-mRNA-1 |
chr6_1 | CDS | 357173 | 358869 | 357173 | ID=Msa0867490-mRNA-1:cds;Parent=Msa0867490-mRNA-1 |
Gene Sequence |
Protein sequence |