Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869050 | XP_039682802.1 | 90.504 | 337 | 23 | 2 | 1 | 330 | 1 | 335 | 0.0 | 603 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869050 | G7KHJ0 | 87.644 | 348 | 23 | 3 | 1 | 330 | 1 | 346 | 0.0 | 596 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0182620 | Msa0869050 | -0.808651 | 2.789583e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869050 | MtrunA17_Chr6g0449901 | 87.644 | 348 | 23 | 3 | 1 | 330 | 1 | 346 | 0.0 | 596 |
| Msa0869050 | MtrunA17_Chr4g0044891 | 91.541 | 331 | 22 | 2 | 1 | 330 | 1 | 326 | 0.0 | 595 |
| Msa0869050 | MtrunA17_Chr4g0027081 | 51.929 | 337 | 144 | 7 | 1 | 330 | 1 | 326 | 9.73e-122 | 353 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0869050 | AT5G55610.1 | 51.051 | 333 | 150 | 4 | 1 | 327 | 1 | 326 | 8.12e-105 | 310 |
| Msa0869050 | AT5G55610.2 | 50.885 | 226 | 101 | 3 | 1 | 220 | 1 | 222 | 2.79e-59 | 192 |
Find 78 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAATAAGGTTTGTGTTAA+AGG | 0.126668 | 6_1:-2864175 | None:intergenic |
| TTCATCTTTGGCATTGAAAA+TGG | 0.182078 | 6_1:-2868444 | None:intergenic |
| ATGAGCTACTAACTTGAATT+TGG | 0.185964 | 6_1:+2868918 | Msa0869050:three_prime_UTR |
| TCCGAGAAGTTGAACTTTCT+TGG | 0.226876 | 6_1:-2868501 | None:intergenic |
| GATGCACTATTTGCCTCTTT+TGG | 0.231224 | 6_1:+2866397 | Msa0869050:CDS |
| ACAAAACAAAACAAGGTTTA+AGG | 0.244005 | 6_1:-2864233 | None:intergenic |
| GACATTACTGTCTTCATCTT+TGG | 0.244834 | 6_1:-2868456 | None:intergenic |
| TAGCTATACTTGTAGATCTT+TGG | 0.260601 | 6_1:+2864316 | Msa0869050:CDS |
| ATGGCTTGGAAACTTCTTAA+AGG | 0.268888 | 6_1:+2867977 | Msa0869050:CDS |
| AAAGCAGAGAATAGAGGTTT+AGG | 0.316498 | 6_1:-2866332 | None:intergenic |
| GAAACGAAAGCAAGGCAATA+AGG | 0.360292 | 6_1:-2864188 | None:intergenic |
| AGGTTTGTGTTAAAGGTAGA+TGG | 0.361362 | 6_1:-2864168 | None:intergenic |
| TTTGGAGCCGCGTGCAGAAA+TGG | 0.387524 | 6_1:+2866415 | Msa0869050:CDS |
| AGGTTGCCCTTACTTCAATA+AGG | 0.392106 | 6_1:+2868528 | Msa0869050:CDS |
| ACCAAGAAAGTTCAACTTCT+CGG | 0.394433 | 6_1:+2868500 | Msa0869050:CDS |
| TTTCTTGGTTGTATCTTGCT+TGG | 0.404133 | 6_1:-2868486 | None:intergenic |
| AGGATGTGCTGCCGGTGATT+TGG | 0.405850 | 6_1:+2868749 | Msa0869050:intron |
| ACCAGATCAACACGGTGTTC+TGG | 0.408130 | 6_1:-2866485 | None:intergenic |
| CGCCACTTGAAATGCTTTGT+CGG | 0.412078 | 6_1:-2868799 | None:intergenic |
| CCATTCGCTCTGAAACATAA+TGG | 0.424104 | 6_1:-2867958 | None:intergenic |
| AAAGAGGCAAATAGTGCATC+AGG | 0.438648 | 6_1:-2866394 | None:intergenic |
| TATTCTCTGCTTTCGAATTG+AGG | 0.445697 | 6_1:+2866342 | Msa0869050:CDS |
| AACCACACCTTATTGAAGTA+AGG | 0.448289 | 6_1:-2868535 | None:intergenic |
| CACTTGCAATGACTTCAATA+AGG | 0.453405 | 6_1:+2866366 | Msa0869050:CDS |
| GCCAGAACACCGTGTTGATC+TGG | 0.456801 | 6_1:+2866484 | Msa0869050:CDS |
| ACCCTTGTTCGTCCATCACT+TGG | 0.457968 | 6_1:+2868599 | Msa0869050:CDS |
| AGCACCGATCCCTGCCCCTA+TGG | 0.475532 | 6_1:-2868576 | None:intergenic |
| TGCTAGGAGTTGCAGCATCA+TGG | 0.479028 | 6_1:+2868381 | Msa0869050:CDS |
| AATTCGAAAGCAGAGAATAG+AGG | 0.484596 | 6_1:-2866338 | None:intergenic |
| CCAGCATCACAGTATGCAAC+TGG | 0.485757 | 6_1:-2866206 | None:intergenic |
| GAAAAGAAGTAAACATAAGT+AGG | 0.487456 | 6_1:-2868235 | None:intergenic |
| GCCTTGCGAGTAGCTGATCT+AGG | 0.494720 | 6_1:-2868199 | None:intergenic |
| CAGAGAATAGAGGTTTAGGT+TGG | 0.496669 | 6_1:-2866328 | None:intergenic |
| CTATACTTGTAGATCTTTGG+AGG | 0.500097 | 6_1:+2864319 | Msa0869050:CDS |
| TGTGCTGCCGGTGATTTGGC+TGG | 0.502141 | 6_1:+2868753 | Msa0869050:CDS |
| AGTAATAAAGTCACCATCAT+GGG | 0.504819 | 6_1:-2868978 | None:intergenic |
| CGCCGACAAAGCATTTCAAG+TGG | 0.505451 | 6_1:+2868797 | Msa0869050:CDS |
| GACACTGACAGTTTAGAAAG+TGG | 0.507342 | 6_1:-2869015 | None:intergenic |
| AGCAGCAACAGCAGCAGAAG+AGG | 0.512758 | 6_1:-2864370 | None:intergenic |
| GCCTCCATAGGGGCAGGGAT+CGG | 0.514022 | 6_1:+2868572 | Msa0869050:CDS |
| TTATGATCTTACCGATCCAC+TGG | 0.515709 | 6_1:-2868622 | None:intergenic |
| CCATTATGTTTCAGAGCGAA+TGG | 0.519354 | 6_1:+2867958 | Msa0869050:CDS |
| CCAGTTGCATACTGTGATGC+TGG | 0.519424 | 6_1:+2866206 | Msa0869050:CDS |
| GCTAGGAGTTGCAGCATCAT+GGG | 0.526174 | 6_1:+2868382 | Msa0869050:CDS |
| GCCCTTACTTCAATAAGGTG+TGG | 0.528158 | 6_1:+2868533 | Msa0869050:CDS |
| GAAAGCCCTTGAAGCAAAAG+TGG | 0.529614 | 6_1:-2864418 | None:intergenic |
| TTCGTCCATCACTTGGCCAG+TGG | 0.531883 | 6_1:+2868606 | Msa0869050:CDS |
| TCTGCACGCGGCTCCAAAAG+AGG | 0.534094 | 6_1:-2866410 | None:intergenic |
| ACAATACAATAAACAATGGC+GGG | 0.538346 | 6_1:+2864291 | Msa0869050:exon |
| TCTTTCTAAAATTCTTCTAG+TGG | 0.544463 | 6_1:-2867927 | None:intergenic |
| TTGAATTTGAAACGAAAGCA+AGG | 0.546596 | 6_1:-2864196 | None:intergenic |
| CCATCACTTGGCCAGTGGAT+CGG | 0.546651 | 6_1:+2868611 | Msa0869050:CDS |
| CAGTAATAAAGTCACCATCA+TGG | 0.554915 | 6_1:-2868979 | None:intergenic |
| AGTTCAACTTCTCGGACAGA+AGG | 0.558991 | 6_1:+2868508 | Msa0869050:CDS |
| TTGTAACATTCTTCCCATGA+TGG | 0.559569 | 6_1:+2868965 | Msa0869050:three_prime_UTR |
| ACCGATCCCTGCCCCTATGG+AGG | 0.559840 | 6_1:-2868573 | None:intergenic |
| TTGTGTTAAAGGTAGATGGA+TGG | 0.560492 | 6_1:-2864164 | None:intergenic |
| CCGATCCACTGGCCAAGTGA+TGG | 0.565048 | 6_1:-2868611 | None:intergenic |
| GCGCAAAATGCTACAATGAG+TGG | 0.576189 | 6_1:-2868777 | None:intergenic |
| ATGGGTTGTTCAAGTAGGCA+TGG | 0.578157 | 6_1:+2868400 | Msa0869050:CDS |
| GCATCATGGGTTGTTCAAGT+AGG | 0.587111 | 6_1:+2868395 | Msa0869050:CDS |
| GAGTGGACCAGCCAAATCAC+CGG | 0.591854 | 6_1:-2868760 | None:intergenic |
| ATGTTTCAGAGCGAATGGCT+TGG | 0.594195 | 6_1:+2867963 | Msa0869050:CDS |
| AACAATACAATAAACAATGG+CGG | 0.596958 | 6_1:+2864290 | Msa0869050:exon |
| CTATACAAAGTGCTTCTGAA+AGG | 0.598512 | 6_1:+2866258 | Msa0869050:CDS |
| TTATGCACAGGACACATGCT+AGG | 0.599684 | 6_1:+2868365 | Msa0869050:intron |
| ACCACACCTTATTGAAGTAA+GGG | 0.601634 | 6_1:-2868534 | None:intergenic |
| TTAAAGGTAGATGGATGGAA+TGG | 0.604440 | 6_1:-2864159 | None:intergenic |
| GGCCAAGTGATGGACGAACA+AGG | 0.608320 | 6_1:-2868601 | None:intergenic |
| TCATCTTCCATTTCTGCACG+CGG | 0.609167 | 6_1:-2866422 | None:intergenic |
| TCCTAGATCAGCTACTCGCA+AGG | 0.622944 | 6_1:+2868198 | Msa0869050:CDS |
| GCCAAGTGATGGACGAACAA+GGG | 0.637107 | 6_1:-2868600 | None:intergenic |
| AATAAGATCTTCAGATACTG+TGG | 0.646098 | 6_1:-2866231 | None:intergenic |
| TAGAACAATACAATAAACAA+TGG | 0.646275 | 6_1:+2864287 | Msa0869050:exon |
| AAAAGTCACAAAACAAAACA+AGG | 0.654873 | 6_1:-2864240 | None:intergenic |
| TGTGAAGCAAATCATACGTG+AGG | 0.663381 | 6_1:+2866526 | Msa0869050:CDS |
| GTGGGCAGAACAACATTCAG+AGG | 0.670489 | 6_1:+2868259 | Msa0869050:CDS |
| AGGGAACAACCAGATCAACA+CGG | 0.751632 | 6_1:-2866493 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTAAAATATAGTAAAAT+TGG | - | chr6_1:2866060-2866079 | None:intergenic | 10.0% |
| !!! | ATCTCATTTATTTTTAATCT+TGG | + | chr6_1:2867112-2867131 | Msa0869050:intron | 15.0% |
| !! | TCAAATAAGTTTCAAAAAAT+TGG | - | chr6_1:2867225-2867244 | None:intergenic | 15.0% |
| !! | TAGAACAATACAATAAACAA+TGG | + | chr6_1:2864287-2864306 | Msa0869050:exon | 20.0% |
| !!! | TTTGTGTTACTCTTTTTATT+TGG | + | chr6_1:2864462-2864481 | Msa0869050:intron | 20.0% |
| !!! | GGTTTTGGTTATTTTTATAA+GGG | + | chr6_1:2864519-2864538 | Msa0869050:intron | 20.0% |
| !!! | GTTTTTTAGTTTAGTTGATT+TGG | + | chr6_1:2864557-2864576 | Msa0869050:intron | 20.0% |
| !! | ACATGTTATTACATTGAATT+AGG | + | chr6_1:2864855-2864874 | Msa0869050:intron | 20.0% |
| !!! | AACAAATAAACTATTTTCCA+CGG | - | chr6_1:2865288-2865307 | None:intergenic | 20.0% |
| !! | TTGTGTAATATACTAATATG+TGG | + | chr6_1:2865896-2865915 | Msa0869050:intron | 20.0% |
| !! | GAAGAAAATAATCTGAATTA+TGG | + | chr6_1:2866016-2866035 | Msa0869050:intron | 20.0% |
| !!! | AATATAGTAAAATTGGTAAC+AGG | - | chr6_1:2866053-2866072 | None:intergenic | 20.0% |
| !! | TAAATTCTTCAAAATCTTCA+AGG | + | chr6_1:2866092-2866111 | Msa0869050:intron | 20.0% |
| !! | AAATTCTTCAAAATCTTCAA+GGG | + | chr6_1:2866093-2866112 | Msa0869050:intron | 20.0% |
| !!! | TATAATTTTTCGTTGTATTC+TGG | + | chr6_1:2866118-2866137 | Msa0869050:intron | 20.0% |
| !! | ATTGATTGATATTAAATGAC+AGG | - | chr6_1:2866691-2866710 | None:intergenic | 20.0% |
| !! | ACAAATAAACATATTAATCG+AGG | + | chr6_1:2866787-2866806 | Msa0869050:intron | 20.0% |
| !! | AGATAAGCTAAAAAAACAAT+TGG | - | chr6_1:2866883-2866902 | None:intergenic | 20.0% |
| !!! | TAACTTTTATCAAGTTAACT+TGG | - | chr6_1:2867020-2867039 | None:intergenic | 20.0% |
| !! | AAGTTTCAAAAAATTGGAAT+TGG | - | chr6_1:2867219-2867238 | None:intergenic | 20.0% |
| !! | AAAACTAATTGCTTGAAATT+TGG | - | chr6_1:2867643-2867662 | None:intergenic | 20.0% |
| !!! | TGCATTTTTTAAATTCATGA+TGG | + | chr6_1:2867795-2867814 | Msa0869050:intron | 20.0% |
| !! | GTAATTTAAAAATGGTACTA+TGG | + | chr6_1:2867837-2867856 | Msa0869050:intron | 20.0% |
| !! | AGTTGAAATGAATTAAAATC+AGG | - | chr6_1:2868700-2868719 | None:intergenic | 20.0% |
| ! | ACAAAACAAAACAAGGTTTA+AGG | - | chr6_1:2864236-2864255 | None:intergenic | 25.0% |
| ! | AAAAGTCACAAAACAAAACA+AGG | - | chr6_1:2864243-2864262 | None:intergenic | 25.0% |
| ! | AACAATACAATAAACAATGG+CGG | + | chr6_1:2864290-2864309 | Msa0869050:exon | 25.0% |
| !!! | TAGTTTTGATGTTTTTGAGA+TGG | + | chr6_1:2864497-2864516 | Msa0869050:intron | 25.0% |
| !!! | AGTTTTGATGTTTTTGAGAT+GGG | + | chr6_1:2864498-2864517 | Msa0869050:intron | 25.0% |
| !!! | GGGTTTTGGTTATTTTTATA+AGG | + | chr6_1:2864518-2864537 | Msa0869050:intron | 25.0% |
| !!! | TTTGGTTATTTTTATAAGGG+TGG | + | chr6_1:2864522-2864541 | Msa0869050:intron | 25.0% |
| ! | GTTAGTATTCATTCAGATTT+AGG | + | chr6_1:2864616-2864635 | Msa0869050:intron | 25.0% |
| ! | ATTTAGGTGTTTGTTTAAGA+TGG | + | chr6_1:2864632-2864651 | Msa0869050:intron | 25.0% |
| !! | TTTAGGTGTTTGTTTAAGAT+GGG | + | chr6_1:2864633-2864652 | Msa0869050:intron | 25.0% |
| ! | TGTTATTACATTGAATTAGG+TGG | + | chr6_1:2864858-2864877 | Msa0869050:intron | 25.0% |
| !! | CTATTTGATAACACTTAGTT+TGG | + | chr6_1:2865339-2865358 | Msa0869050:intron | 25.0% |
| ! | ATATTGAAACTTCAATAACC+TGG | + | chr6_1:2865779-2865798 | Msa0869050:intron | 25.0% |
| ! | CTTATAAACACAAAGAATCA+TGG | - | chr6_1:2865954-2865973 | None:intergenic | 25.0% |
| ! | ATAAGAGAAAGTAGAGAAAT+AGG | + | chr6_1:2865969-2865988 | Msa0869050:intron | 25.0% |
| !! | TTATCCTGTTGTTGTATTTT+TGG | + | chr6_1:2865992-2866011 | Msa0869050:intron | 25.0% |
| ! | AATTCTTCAAAATCTTCAAG+GGG | + | chr6_1:2866094-2866113 | Msa0869050:intron | 25.0% |
| !! | ATCTTTTGACAGTATTATTG+AGG | + | chr6_1:2866451-2866470 | Msa0869050:CDS | 25.0% |
| ! | AATAAACATATTAATCGAGG+TGG | + | chr6_1:2866790-2866809 | Msa0869050:intron | 25.0% |
| !! | AGCTTTTATGGAAAATCATT+AGG | - | chr6_1:2866929-2866948 | None:intergenic | 25.0% |
| !! | TACTCATTTCTTTTCTCAAA+TGG | - | chr6_1:2866966-2866985 | None:intergenic | 25.0% |
| ! | AAGTTAACCAATTATTAGTG+TGG | + | chr6_1:2867034-2867053 | Msa0869050:intron | 25.0% |
| ! | AATACATCCACACTAATAAT+TGG | - | chr6_1:2867044-2867063 | None:intergenic | 25.0% |
| !! | TTATTAGTGTGGATGTATTT+TGG | + | chr6_1:2867045-2867064 | Msa0869050:intron | 25.0% |
| !! | AGTACCAGAAAAGAAATTTT+GGG | - | chr6_1:2867362-2867381 | None:intergenic | 25.0% |
| ! | AACAAAGATAAAAGATGTTG+AGG | - | chr6_1:2867407-2867426 | None:intergenic | 25.0% |
| ! | AATGTGGTTTACTCTATTAT+AGG | - | chr6_1:2867433-2867452 | None:intergenic | 25.0% |
| !!! | TCGACTTGGTAATTTAAAAA+TGG | + | chr6_1:2867829-2867848 | Msa0869050:intron | 25.0% |
| !!! | TCTTTCTAAAATTCTTCTAG+TGG | - | chr6_1:2867930-2867949 | None:intergenic | 25.0% |
| ! | GAAAAGAAGTAAACATAAGT+AGG | - | chr6_1:2868238-2868257 | None:intergenic | 25.0% |
| !! | TTATGTTTACTTCTTTTCTG+TGG | + | chr6_1:2868240-2868259 | Msa0869050:CDS | 25.0% |
| !! | TATGTTTACTTCTTTTCTGT+GGG | + | chr6_1:2868241-2868260 | Msa0869050:CDS | 25.0% |
| !! | AATAGTTGATATAAATGCTC+AGG | - | chr6_1:2868325-2868344 | None:intergenic | 25.0% |
| !!! | AGATACACAATTCATTTTTG+AGG | - | chr6_1:2868864-2868883 | None:intergenic | 25.0% |
| ! | TTGAATTTGAAACGAAAGCA+AGG | - | chr6_1:2864199-2864218 | None:intergenic | 30.0% |
| ACAATACAATAAACAATGGC+GGG | + | chr6_1:2864291-2864310 | Msa0869050:exon | 30.0% | |
| TAGCTATACTTGTAGATCTT+TGG | + | chr6_1:2864316-2864335 | Msa0869050:CDS | 30.0% | |
| !! | TGATTTGGTGTTTGATGATT+TGG | + | chr6_1:2864572-2864591 | Msa0869050:intron | 30.0% |
| !! | GATTTGGTGTTTGATGATTT+GGG | + | chr6_1:2864573-2864592 | Msa0869050:intron | 30.0% |
| !! | ATTTGGTGTTTGATGATTTG+GGG | + | chr6_1:2864574-2864593 | Msa0869050:intron | 30.0% |
| CAATAAGCTTACTAAGTTAG+AGG | - | chr6_1:2865017-2865036 | None:intergenic | 30.0% | |
| CTAACTTAGTAAGCTTATTG+CGG | + | chr6_1:2865017-2865036 | Msa0869050:intron | 30.0% | |
| ATGTCCAGAAATTTGACAAA+TGG | + | chr6_1:2865175-2865194 | Msa0869050:intron | 30.0% | |
| AAGACCATTTGTCAAATTTC+TGG | - | chr6_1:2865182-2865201 | None:intergenic | 30.0% | |
| AGCAATCTACAACAATCATA+AGG | - | chr6_1:2865247-2865266 | None:intergenic | 30.0% | |
| ! | TAGTACTGAGATTTGATGAA+TGG | + | chr6_1:2865511-2865530 | Msa0869050:intron | 30.0% |
| GTACCTTATGATTGTTTGTT+AGG | + | chr6_1:2865587-2865606 | Msa0869050:intron | 30.0% | |
| TTGCCTAACAAACAATCATA+AGG | - | chr6_1:2865593-2865612 | None:intergenic | 30.0% | |
| ! | TTATGATTGTTTGTTAGGCA+AGG | + | chr6_1:2865592-2865611 | Msa0869050:intron | 30.0% |
| ! | TATGATTGTTTGTTAGGCAA+GGG | + | chr6_1:2865593-2865612 | Msa0869050:intron | 30.0% |
| ATGCAGATTAATGTCTTAGT+AGG | + | chr6_1:2865656-2865675 | Msa0869050:intron | 30.0% | |
| TGCAGATTAATGTCTTAGTA+GGG | + | chr6_1:2865657-2865676 | Msa0869050:intron | 30.0% | |
| ATGATGTGCAAGGAAAAAAA+AGG | + | chr6_1:2865919-2865938 | Msa0869050:intron | 30.0% | |
| TTCACCAAAAATACAACAAC+AGG | - | chr6_1:2865999-2866018 | None:intergenic | 30.0% | |
| ATTCTTCAAAATCTTCAAGG+GGG | + | chr6_1:2866095-2866114 | Msa0869050:intron | 30.0% | |
| ! | ACTTTTGTTCATGACATCTT+TGG | + | chr6_1:2866154-2866173 | Msa0869050:intron | 30.0% |
| ! | AATTGCACCTCTTTAATTTC+AGG | + | chr6_1:2866180-2866199 | Msa0869050:intron | 30.0% |
| AATAAGATCTTCAGATACTG+TGG | - | chr6_1:2866234-2866253 | None:intergenic | 30.0% | |
| AGATAATTTACTTAGCGAAG+AGG | - | chr6_1:2866758-2866777 | None:intergenic | 30.0% | |
| ! | TAGCTTATCTTCTCCTTTTA+AGG | + | chr6_1:2866893-2866912 | Msa0869050:intron | 30.0% |
| ! | ATTTTCCATAAAAGCTCTTG+AGG | + | chr6_1:2866933-2866952 | Msa0869050:intron | 30.0% |
| ! | TTTTTCCTCAAGAGCTTTTA+TGG | - | chr6_1:2866941-2866960 | None:intergenic | 30.0% |
| GAAACAAGACAAGCTATATT+AGG | - | chr6_1:2867087-2867106 | None:intergenic | 30.0% | |
| GAGCTCTCTTCAATTAAAAT+TGG | + | chr6_1:2867191-2867210 | Msa0869050:intron | 30.0% | |
| !! | AAGAAATTTTGGGTCTCTTA+AGG | - | chr6_1:2867352-2867371 | None:intergenic | 30.0% |
| ! | CAGTACCAGAAAAGAAATTT+TGG | - | chr6_1:2867363-2867382 | None:intergenic | 30.0% |
| TGAACTATTATAGAGCAATG+TGG | - | chr6_1:2867449-2867468 | None:intergenic | 30.0% | |
| TTGAAATTTGGAGATAGAGT+TGG | - | chr6_1:2867631-2867650 | None:intergenic | 30.0% | |
| ! | ACTTCTTAAAGGTATGTTCT+CGG | + | chr6_1:2867988-2868007 | Msa0869050:intron | 30.0% |
| ! | AAAAATGCACGGATTATTCA+AGG | - | chr6_1:2868295-2868314 | None:intergenic | 30.0% |
| !!! | GAATAATCCGTGCATTTTTT+AGG | + | chr6_1:2868296-2868315 | Msa0869050:intron | 30.0% |
| ! | TTCATCTTTGGCATTGAAAA+TGG | - | chr6_1:2868447-2868466 | None:intergenic | 30.0% |
| ! | AAAACCTTGTTCTTCTTTTC+AGG | + | chr6_1:2868729-2868748 | Msa0869050:intron | 30.0% |
| ATGAGCTACTAACTTGAATT+TGG | + | chr6_1:2868918-2868937 | Msa0869050:three_prime_UTR | 30.0% | |
| AGTAATAAAGTCACCATCAT+GGG | - | chr6_1:2868981-2869000 | None:intergenic | 30.0% | |
| TTAAAGGTAGATGGATGGAA+TGG | - | chr6_1:2864162-2864181 | None:intergenic | 35.0% | |
| TTGTGTTAAAGGTAGATGGA+TGG | - | chr6_1:2864167-2864186 | None:intergenic | 35.0% | |
| AGGTTTGTGTTAAAGGTAGA+TGG | - | chr6_1:2864171-2864190 | None:intergenic | 35.0% | |
| GGCAATAAGGTTTGTGTTAA+AGG | - | chr6_1:2864178-2864197 | None:intergenic | 35.0% | |
| CTATACTTGTAGATCTTTGG+AGG | + | chr6_1:2864319-2864338 | Msa0869050:CDS | 35.0% | |
| !!! | GATGTTTTTGAGATGGGTTT+TGG | + | chr6_1:2864504-2864523 | Msa0869050:intron | 35.0% |
| ! | TGTTTGATGATTTGGGGTAT+TGG | + | chr6_1:2864580-2864599 | Msa0869050:intron | 35.0% |
| !! | ATGATTTGGGGTATTGGTTA+TGG | + | chr6_1:2864586-2864605 | Msa0869050:intron | 35.0% |
| TGACACGTTGATACTGATAA+TGG | + | chr6_1:2864694-2864713 | Msa0869050:intron | 35.0% | |
| ATGAAGCAATGACATAGACA+CGG | - | chr6_1:2864935-2864954 | None:intergenic | 35.0% | |
| TGTCTATGTCATTGCTTCAT+AGG | + | chr6_1:2864935-2864954 | Msa0869050:intron | 35.0% | |
| GTCTATGTCATTGCTTCATA+GGG | + | chr6_1:2864936-2864955 | Msa0869050:intron | 35.0% | |
| TAGCAAGATTGTCAAATTGC+AGG | - | chr6_1:2865091-2865110 | None:intergenic | 35.0% | |
| TAGTGGGATATGTGATTGTT+AGG | + | chr6_1:2865116-2865135 | Msa0869050:intron | 35.0% | |
| GATATGTGATTGTTAGGATG+TGG | + | chr6_1:2865122-2865141 | Msa0869050:intron | 35.0% | |
| TGTTAGGATGTGGTTAGATT+AGG | + | chr6_1:2865132-2865151 | Msa0869050:intron | 35.0% | |
| TGATTGTTGTAGATTGCTAG+TGG | + | chr6_1:2865249-2865268 | Msa0869050:intron | 35.0% | |
| TAGTTTGGTATAGCGTATCA+CGG | + | chr6_1:2865354-2865373 | Msa0869050:intron | 35.0% | |
| TATTTGACAACTCTGCTAGT+GGG | + | chr6_1:2865428-2865447 | Msa0869050:intron | 35.0% | |
| GTATGTAAAACGAGCAACAT+GGG | - | chr6_1:2865810-2865829 | None:intergenic | 35.0% | |
| TGTATGTAAAACGAGCAACA+TGG | - | chr6_1:2865811-2865830 | None:intergenic | 35.0% | |
| CATCAAATCTCAATGCAACT+TGG | - | chr6_1:2865869-2865888 | None:intergenic | 35.0% | |
| CAAGTTGCATTGAGATTTGA+TGG | + | chr6_1:2865867-2865886 | Msa0869050:intron | 35.0% | |
| TGCATTGAGATTTGATGGAA+AGG | + | chr6_1:2865872-2865891 | Msa0869050:intron | 35.0% | |
| TAATATGTGGATGATGTGCA+AGG | + | chr6_1:2865909-2865928 | Msa0869050:intron | 35.0% | |
| CTGGTATCCTGAAATTAAAG+AGG | - | chr6_1:2866190-2866209 | None:intergenic | 35.0% | |
| ! | CTATACAAAGTGCTTCTGAA+AGG | + | chr6_1:2866258-2866277 | Msa0869050:CDS | 35.0% |
| AAAGCAGAGAATAGAGGTTT+AGG | - | chr6_1:2866335-2866354 | None:intergenic | 35.0% | |
| AATTCGAAAGCAGAGAATAG+AGG | - | chr6_1:2866341-2866360 | None:intergenic | 35.0% | |
| TATTCTCTGCTTTCGAATTG+AGG | + | chr6_1:2866342-2866361 | Msa0869050:CDS | 35.0% | |
| CACTTGCAATGACTTCAATA+AGG | + | chr6_1:2866366-2866385 | Msa0869050:CDS | 35.0% | |
| ! | TGCTTCACAGACTTTTTGAA+GGG | - | chr6_1:2866515-2866534 | None:intergenic | 35.0% |
| ! | TTGCTTCACAGACTTTTTGA+AGG | - | chr6_1:2866516-2866535 | None:intergenic | 35.0% |
| AATGACAGGTCACATTCTTT+GGG | - | chr6_1:2866677-2866696 | None:intergenic | 35.0% | |
| AAATGACAGGTCACATTCTT+TGG | - | chr6_1:2866678-2866697 | None:intergenic | 35.0% | |
| CACCATACACATAGAGAAAA+CGG | - | chr6_1:2866849-2866868 | None:intergenic | 35.0% | |
| ! | TTTTTCTGAGTCTTGAACAG+TGG | + | chr6_1:2867256-2867275 | Msa0869050:intron | 35.0% |
| !! | AATGAAGCTAAGGTTGATAG+TGG | + | chr6_1:2867287-2867306 | Msa0869050:intron | 35.0% |
| !! | CAAGGCATCTCAAAAGTTTT+TGG | - | chr6_1:2867314-2867333 | None:intergenic | 35.0% |
| !!! | AAAACTTTTGAGATGCCTTG+AGG | + | chr6_1:2867314-2867333 | Msa0869050:intron | 35.0% |
| ATGCCTTGAGGTTCAATTAA+TGG | + | chr6_1:2867326-2867345 | Msa0869050:intron | 35.0% | |
| ! | GAGACCCAAAATTTCTTTTC+TGG | + | chr6_1:2867355-2867374 | Msa0869050:intron | 35.0% |
| GGATTAATCGAAGCATAATG+AGG | - | chr6_1:2867486-2867505 | None:intergenic | 35.0% | |
| !! | GAAACTCGGGATTCATTTTT+AGG | + | chr6_1:2867542-2867561 | Msa0869050:intron | 35.0% |
| AGACTAGAATACCATGAAAC+AGG | + | chr6_1:2867677-2867696 | Msa0869050:intron | 35.0% | |
| CATGAAACAGGTGTTTAAGA+GGG | + | chr6_1:2867689-2867708 | Msa0869050:intron | 35.0% | |
| ! | ATGGCTTGGAAACTTCTTAA+AGG | + | chr6_1:2867977-2867996 | Msa0869050:CDS | 35.0% |
| ! | TATTAAACTTTGGCCGCTTT+AGG | - | chr6_1:2868066-2868085 | None:intergenic | 35.0% |
| ! | AGATTTTACATGCACTCACA+CGG | + | chr6_1:2868148-2868167 | Msa0869050:intron | 35.0% |
| CAGGTTACCTAAAAAATGCA+CGG | - | chr6_1:2868306-2868325 | None:intergenic | 35.0% | |
| TCTCTATGTTCATTATGCAC+AGG | + | chr6_1:2868353-2868372 | Msa0869050:intron | 35.0% | |
| GACATTACTGTCTTCATCTT+TGG | - | chr6_1:2868459-2868478 | None:intergenic | 35.0% | |
| TTTCTTGGTTGTATCTTGCT+TGG | - | chr6_1:2868489-2868508 | None:intergenic | 35.0% | |
| ACCAAGAAAGTTCAACTTCT+CGG | + | chr6_1:2868500-2868519 | Msa0869050:CDS | 35.0% | |
| ACCACACCTTATTGAAGTAA+GGG | - | chr6_1:2868537-2868556 | None:intergenic | 35.0% | |
| AACCACACCTTATTGAAGTA+AGG | - | chr6_1:2868538-2868557 | None:intergenic | 35.0% | |
| !!! | TCTTTAGTTTTTGCCTCCAT+AGG | + | chr6_1:2868560-2868579 | Msa0869050:CDS | 35.0% |
| !!! | CTTTAGTTTTTGCCTCCATA+GGG | + | chr6_1:2868561-2868580 | Msa0869050:CDS | 35.0% |
| !!! | TTTAGTTTTTGCCTCCATAG+GGG | + | chr6_1:2868562-2868581 | Msa0869050:CDS | 35.0% |
| ! | GAAGAACAAGGTTTTGCTTT+AGG | - | chr6_1:2868724-2868743 | None:intergenic | 35.0% |
| ACATCCTGAAAAGAAGAACA+AGG | - | chr6_1:2868736-2868755 | None:intergenic | 35.0% | |
| ! | TGAACTCTTTTGAGCTGAAA+TGG | + | chr6_1:2868942-2868961 | Msa0869050:three_prime_UTR | 35.0% |
| TTGTAACATTCTTCCCATGA+TGG | + | chr6_1:2868965-2868984 | Msa0869050:three_prime_UTR | 35.0% | |
| CAGTAATAAAGTCACCATCA+TGG | - | chr6_1:2868982-2869001 | None:intergenic | 35.0% | |
| GAAACGAAAGCAAGGCAATA+AGG | - | chr6_1:2864191-2864210 | None:intergenic | 40.0% | |
| !! | TGGTACCACTTTTGCTTCAA+GGG | + | chr6_1:2864413-2864432 | Msa0869050:CDS | 40.0% |
| AAGGGCTTTCTTTCAGTATG+TGG | + | chr6_1:2864431-2864450 | Msa0869050:intron | 40.0% | |
| CTTCTGATCGAAATTGTGTC+CGG | - | chr6_1:2864761-2864780 | None:intergenic | 40.0% | |
| GGACACAATTTCGATCAGAA+GGG | + | chr6_1:2864760-2864779 | Msa0869050:intron | 40.0% | |
| ACAATCTTGCTAGATGCTAG+TGG | + | chr6_1:2865099-2865118 | Msa0869050:intron | 40.0% | |
| CAATCTTGCTAGATGCTAGT+GGG | + | chr6_1:2865100-2865119 | Msa0869050:intron | 40.0% | |
| ! | TAGTGAGCAGTTTGTTTGTC+AGG | + | chr6_1:2865221-2865240 | Msa0869050:intron | 40.0% |
| CTAGCAGAGTTGTCAAATAG+CGG | - | chr6_1:2865427-2865446 | None:intergenic | 40.0% | |
| CTATTTGACAACTCTGCTAG+TGG | + | chr6_1:2865427-2865446 | Msa0869050:intron | 40.0% | |
| TTTGTTAGGCAAGGGTAAGA+AGG | + | chr6_1:2865601-2865620 | Msa0869050:intron | 40.0% | |
| TTGTTAGGCAAGGGTAAGAA+GGG | + | chr6_1:2865602-2865621 | Msa0869050:intron | 40.0% | |
| ! | TGTCTTAGTAGGGTTTTGCT+TGG | + | chr6_1:2865667-2865686 | Msa0869050:intron | 40.0% |
| CAGAGAATAGAGGTTTAGGT+TGG | - | chr6_1:2866331-2866350 | None:intergenic | 40.0% | |
| AAAGAGGCAAATAGTGCATC+AGG | - | chr6_1:2866397-2866416 | None:intergenic | 40.0% | |
| ! | GATGCACTATTTGCCTCTTT+TGG | + | chr6_1:2866397-2866416 | Msa0869050:CDS | 40.0% |
| TGTGAAGCAAATCATACGTG+AGG | + | chr6_1:2866526-2866545 | Msa0869050:CDS | 40.0% | |
| ! | GTCCGTTTTCTCTATGTGTA+TGG | + | chr6_1:2866844-2866863 | Msa0869050:intron | 40.0% |
| AGGCTCAGTTTCTCCTTAAA+AGG | - | chr6_1:2866909-2866928 | None:intergenic | 40.0% | |
| GGTGTGTAGTAATGAAGCTA+AGG | + | chr6_1:2867277-2867296 | Msa0869050:intron | 40.0% | |
| AGGCCATTAATTGAACCTCA+AGG | - | chr6_1:2867332-2867351 | None:intergenic | 40.0% | |
| GATAAAAGATGTTGAGGCAG+AGG | - | chr6_1:2867401-2867420 | None:intergenic | 40.0% | |
| GGGATAGATGCAAGACAAAT+GGG | - | chr6_1:2867507-2867526 | None:intergenic | 40.0% | |
| AGTTTCCTTGTCAAGTGAAG+GGG | - | chr6_1:2867528-2867547 | None:intergenic | 40.0% | |
| GAGTTTCCTTGTCAAGTGAA+GGG | - | chr6_1:2867529-2867548 | None:intergenic | 40.0% | |
| CTTCACTTGACAAGGAAACT+CGG | + | chr6_1:2867528-2867547 | Msa0869050:intron | 40.0% | |
| TTCACTTGACAAGGAAACTC+GGG | + | chr6_1:2867529-2867548 | Msa0869050:intron | 40.0% | |
| ! | TCTTTTCCGAGTTGTATGCA+AGG | + | chr6_1:2867575-2867594 | Msa0869050:intron | 40.0% |
| AAGCATCCTTGCATACAACT+CGG | - | chr6_1:2867584-2867603 | None:intergenic | 40.0% | |
| GGATGCTTGCATAGAAATCT+TGG | + | chr6_1:2867596-2867615 | Msa0869050:intron | 40.0% | |
| CCTCTTAAACACCTGTTTCA+TGG | - | chr6_1:2867691-2867710 | None:intergenic | 40.0% | |
| CCATGAAACAGGTGTTTAAG+AGG | + | chr6_1:2867688-2867707 | Msa0869050:intron | 40.0% | |
| !! | CCATTCGCTCTGAAACATAA+TGG | - | chr6_1:2867961-2867980 | None:intergenic | 40.0% |
| CCATTATGTTTCAGAGCGAA+TGG | + | chr6_1:2867958-2867977 | Msa0869050:CDS | 40.0% | |
| GCTCTTGCATATACCTAAAG+CGG | + | chr6_1:2868050-2868069 | Msa0869050:intron | 40.0% | |
| TCCGAGAAGTTGAACTTTCT+TGG | - | chr6_1:2868504-2868523 | None:intergenic | 40.0% | |
| AGGTTGCCCTTACTTCAATA+AGG | + | chr6_1:2868528-2868547 | Msa0869050:CDS | 40.0% | |
| TTATGATCTTACCGATCCAC+TGG | - | chr6_1:2868625-2868644 | None:intergenic | 40.0% | |
| GACACTGACAGTTTAGAAAG+TGG | - | chr6_1:2869018-2869037 | None:intergenic | 40.0% | |
| !! | CTGGTACCACTTTTGCTTCA+AGG | + | chr6_1:2864412-2864431 | Msa0869050:CDS | 45.0% |
| GAAAGCCCTTGAAGCAAAAG+TGG | - | chr6_1:2864421-2864440 | None:intergenic | 45.0% | |
| !! | TGGGGTATTGGTTATGGTTG+TGG | + | chr6_1:2864592-2864611 | Msa0869050:intron | 45.0% |
| ! | CATGTGTCAGTGTTGAACAC+CGG | + | chr6_1:2864739-2864758 | Msa0869050:intron | 45.0% |
| CGGACACAATTTCGATCAGA+AGG | + | chr6_1:2864759-2864778 | Msa0869050:intron | 45.0% | |
| AAGCCTAAGATCACAAGCGT+CGG | - | chr6_1:2864794-2864813 | None:intergenic | 45.0% | |
| AACATGTGTCAGTGACGTGT+TGG | - | chr6_1:2864842-2864861 | None:intergenic | 45.0% | |
| !! | ACACTACATGTTGGTGGTAC+TGG | - | chr6_1:2864900-2864919 | None:intergenic | 45.0% |
| AATGACATAGACACGGACAC+AGG | - | chr6_1:2864928-2864947 | None:intergenic | 45.0% | |
| ! | TTGCTTCATAGGGTGCTACA+TGG | + | chr6_1:2864946-2864965 | Msa0869050:intron | 45.0% |
| GTGGACAATGTTATCAACCG+TGG | + | chr6_1:2865268-2865287 | Msa0869050:intron | 45.0% | |
| TAGTGGGATATGTGACAGTC+AGG | + | chr6_1:2865444-2865463 | Msa0869050:intron | 45.0% | |
| AGTGGGATATGTGACAGTCA+GGG | + | chr6_1:2865445-2865464 | Msa0869050:intron | 45.0% | |
| AGTCAGGGTGTGGTTAGATT+TGG | + | chr6_1:2865460-2865479 | Msa0869050:intron | 45.0% | |
| TCATCTTCCATTTCTGCACG+CGG | - | chr6_1:2866425-2866444 | None:intergenic | 45.0% | |
| AGGGAACAACCAGATCAACA+CGG | - | chr6_1:2866496-2866515 | None:intergenic | 45.0% | |
| GAGCTCTATAAACAGCTGAG+AGG | - | chr6_1:2867177-2867196 | None:intergenic | 45.0% | |
| GGGGATAGATGCAAGACAAA+TGG | - | chr6_1:2867508-2867527 | None:intergenic | 45.0% | |
| GTTTCCTTGTCAAGTGAAGG+GGG | - | chr6_1:2867527-2867546 | None:intergenic | 45.0% | |
| CGAGTTTCCTTGTCAAGTGA+AGG | - | chr6_1:2867530-2867549 | None:intergenic | 45.0% | |
| !! | TGGACTCTTTTCTGTCGACT+TGG | + | chr6_1:2867815-2867834 | Msa0869050:intron | 45.0% |
| ATGTTTCAGAGCGAATGGCT+TGG | + | chr6_1:2867963-2867982 | Msa0869050:CDS | 45.0% | |
| TTATGCACAGGACACATGCT+AGG | + | chr6_1:2868365-2868384 | Msa0869050:intron | 45.0% | |
| ! | GCATCATGGGTTGTTCAAGT+AGG | + | chr6_1:2868395-2868414 | Msa0869050:CDS | 45.0% |
| ! | ATGGGTTGTTCAAGTAGGCA+TGG | + | chr6_1:2868400-2868419 | Msa0869050:CDS | 45.0% |
| AGTTCAACTTCTCGGACAGA+AGG | + | chr6_1:2868508-2868527 | Msa0869050:CDS | 45.0% | |
| GCCCTTACTTCAATAAGGTG+TGG | + | chr6_1:2868533-2868552 | Msa0869050:CDS | 45.0% | |
| !! | TTCTTTTCAGGATGTGCTGC+CGG | + | chr6_1:2868741-2868760 | Msa0869050:intron | 45.0% |
| GCGCAAAATGCTACAATGAG+TGG | - | chr6_1:2868780-2868799 | None:intergenic | 45.0% | |
| CGCCACTTGAAATGCTTTGT+CGG | - | chr6_1:2868802-2868821 | None:intergenic | 45.0% | |
| !!! | TTTATAGTTTTATAATTTTA+AGG | + | chr6_1:2867136-2867155 | Msa0869050:intron | 5.0% |
| !!! | TTTTAATATATATTAAACTT+TGG | - | chr6_1:2868076-2868095 | None:intergenic | 5.0% |
| ! | TGTCAGTGACGTGTTGGTGT+GGG | - | chr6_1:2864836-2864855 | None:intergenic | 50.0% |
| GACACGACACTACATGTTGG+TGG | - | chr6_1:2864906-2864925 | None:intergenic | 50.0% | |
| CAGGACACGACACTACATGT+TGG | - | chr6_1:2864909-2864928 | None:intergenic | 50.0% | |
| GATATGTGACAGTCAGGGTG+TGG | + | chr6_1:2865450-2865469 | Msa0869050:intron | 50.0% | |
| CCAGCATCACAGTATGCAAC+TGG | - | chr6_1:2866209-2866228 | None:intergenic | 50.0% | |
| CCAGTTGCATACTGTGATGC+TGG | + | chr6_1:2866206-2866225 | Msa0869050:CDS | 50.0% | |
| ACCAGATCAACACGGTGTTC+TGG | - | chr6_1:2866488-2866507 | None:intergenic | 50.0% | |
| GTTGAGGCAGAGGAGAAAAC+AGG | - | chr6_1:2867391-2867410 | None:intergenic | 50.0% | |
| CTATCCCCCTTCACTTGACA+AGG | + | chr6_1:2867520-2867539 | Msa0869050:intron | 50.0% | |
| TCCTAGATCAGCTACTCGCA+AGG | + | chr6_1:2868198-2868217 | Msa0869050:CDS | 50.0% | |
| GTGGGCAGAACAACATTCAG+AGG | + | chr6_1:2868259-2868278 | Msa0869050:CDS | 50.0% | |
| TGCTAGGAGTTGCAGCATCA+TGG | + | chr6_1:2868381-2868400 | Msa0869050:CDS | 50.0% | |
| GCTAGGAGTTGCAGCATCAT+GGG | + | chr6_1:2868382-2868401 | Msa0869050:CDS | 50.0% | |
| ! | TTTTTGCCTCCATAGGGGCA+GGG | + | chr6_1:2868567-2868586 | Msa0869050:CDS | 50.0% |
| ACCCTTGTTCGTCCATCACT+TGG | + | chr6_1:2868599-2868618 | Msa0869050:CDS | 50.0% | |
| !! | GCCAAGTGATGGACGAACAA+GGG | - | chr6_1:2868603-2868622 | None:intergenic | 50.0% |
| ! | CGCCGACAAAGCATTTCAAG+TGG | + | chr6_1:2868797-2868816 | Msa0869050:CDS | 50.0% |
| AGCAGCAACAGCAGCAGAAG+AGG | - | chr6_1:2864373-2864392 | None:intergenic | 55.0% | |
| ! | GCAGCTGCTTCTTTTGCTGC+TGG | + | chr6_1:2864393-2864412 | Msa0869050:CDS | 55.0% |
| ! | GCACCGACGCTTGTGATCTT+AGG | + | chr6_1:2864788-2864807 | Msa0869050:intron | 55.0% |
| ! | GTGTCAGTGACGTGTTGGTG+TGG | - | chr6_1:2864837-2864856 | None:intergenic | 55.0% |
| CGAGCAACATGGGAACTTCC+AGG | - | chr6_1:2865800-2865819 | None:intergenic | 55.0% | |
| ! | TTTGGAGCCGCGTGCAGAAA+TGG | + | chr6_1:2866415-2866434 | Msa0869050:CDS | 55.0% |
| ! | GCCAGAACACCGTGTTGATC+TGG | + | chr6_1:2866484-2866503 | Msa0869050:CDS | 55.0% |
| GCCTTGCGAGTAGCTGATCT+AGG | - | chr6_1:2868202-2868221 | None:intergenic | 55.0% | |
| ! | GTTTTTGCCTCCATAGGGGC+AGG | + | chr6_1:2868566-2868585 | Msa0869050:CDS | 55.0% |
| !! | GGCCAAGTGATGGACGAACA+AGG | - | chr6_1:2868604-2868623 | None:intergenic | 55.0% |
| TTCGTCCATCACTTGGCCAG+TGG | + | chr6_1:2868606-2868625 | Msa0869050:CDS | 55.0% | |
| CCATCACTTGGCCAGTGGAT+CGG | + | chr6_1:2868611-2868630 | Msa0869050:CDS | 55.0% | |
| AGGATGTGCTGCCGGTGATT+TGG | + | chr6_1:2868749-2868768 | Msa0869050:intron | 55.0% | |
| GAGTGGACCAGCCAAATCAC+CGG | - | chr6_1:2868763-2868782 | None:intergenic | 55.0% | |
| TCTGCACGCGGCTCCAAAAG+AGG | - | chr6_1:2866413-2866432 | None:intergenic | 60.0% | |
| CCGATCCACTGGCCAAGTGA+TGG | - | chr6_1:2868614-2868633 | None:intergenic | 60.0% | |
| ! | TGTGCTGCCGGTGATTTGGC+TGG | + | chr6_1:2868753-2868772 | Msa0869050:CDS | 60.0% |
| GCCTCCATAGGGGCAGGGAT+CGG | + | chr6_1:2868572-2868591 | Msa0869050:CDS | 65.0% | |
| ACCGATCCCTGCCCCTATGG+AGG | - | chr6_1:2868576-2868595 | None:intergenic | 65.0% | |
| !! | AGCACCGATCCCTGCCCCTA+TGG | - | chr6_1:2868579-2868598 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 2864137 | 2869044 | 2864137 | ID=Msa0869050;Name=Msa0869050 |
| chr6_1 | mRNA | 2864137 | 2869044 | 2864137 | ID=Msa0869050-mRNA-1;Parent=Msa0869050;Name=Msa0869050-mRNA-1;_AED=0.10;_eAED=0.10;_QI=169|1|1|1|1|1|6|217|330 |
| chr6_1 | exon | 2864137 | 2864445 | 2864137 | ID=Msa0869050-mRNA-1:exon:878;Parent=Msa0869050-mRNA-1 |
| chr6_1 | exon | 2866202 | 2866547 | 2866202 | ID=Msa0869050-mRNA-1:exon:879;Parent=Msa0869050-mRNA-1 |
| chr6_1 | exon | 2867914 | 2867998 | 2867914 | ID=Msa0869050-mRNA-1:exon:880;Parent=Msa0869050-mRNA-1 |
| chr6_1 | exon | 2868194 | 2868280 | 2868194 | ID=Msa0869050-mRNA-1:exon:881;Parent=Msa0869050-mRNA-1 |
| chr6_1 | exon | 2868375 | 2868632 | 2868375 | ID=Msa0869050-mRNA-1:exon:882;Parent=Msa0869050-mRNA-1 |
| chr6_1 | exon | 2868751 | 2869044 | 2868751 | ID=Msa0869050-mRNA-1:exon:883;Parent=Msa0869050-mRNA-1 |
| chr6_1 | five_prime_UTR | 2864137 | 2864305 | 2864137 | ID=Msa0869050-mRNA-1:five_prime_utr;Parent=Msa0869050-mRNA-1 |
| chr6_1 | CDS | 2864306 | 2864445 | 2864306 | ID=Msa0869050-mRNA-1:cds;Parent=Msa0869050-mRNA-1 |
| chr6_1 | CDS | 2866202 | 2866547 | 2866202 | ID=Msa0869050-mRNA-1:cds;Parent=Msa0869050-mRNA-1 |
| chr6_1 | CDS | 2867914 | 2867998 | 2867914 | ID=Msa0869050-mRNA-1:cds;Parent=Msa0869050-mRNA-1 |
| chr6_1 | CDS | 2868194 | 2868280 | 2868194 | ID=Msa0869050-mRNA-1:cds;Parent=Msa0869050-mRNA-1 |
| chr6_1 | CDS | 2868375 | 2868632 | 2868375 | ID=Msa0869050-mRNA-1:cds;Parent=Msa0869050-mRNA-1 |
| chr6_1 | CDS | 2868751 | 2868827 | 2868751 | ID=Msa0869050-mRNA-1:cds;Parent=Msa0869050-mRNA-1 |
| chr6_1 | three_prime_UTR | 2868828 | 2869044 | 2868828 | ID=Msa0869050-mRNA-1:three_prime_utr;Parent=Msa0869050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
