AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0872980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0872980 MtrunA17_Chr6g0454151 89.792 480 48 1 1 479 1 480 0.0 865
Msa0872980 MtrunA17_Chr6g0454141 83.437 483 77 2 1 480 1 483 0.0 825
Msa0872980 MtrunA17_Chr6g0452771 83.230 483 78 2 1 480 1 483 0.0 810
Msa0872980 MtrunA17_Chr6g0454261 80.331 483 92 2 1 480 1 483 0.0 796
Msa0872980 MtrunA17_Chr6g0453961 75.413 484 115 3 1 480 10 493 0.0 761
Msa0872980 MtrunA17_Chr6g0454191 75.620 484 114 3 1 480 1 484 0.0 744
Msa0872980 MtrunA17_Chr6g0454401 74.793 484 118 3 1 480 1 484 0.0 741
Msa0872980 MtrunA17_Chr6g0454331 73.444 482 123 3 4 480 1 482 0.0 739
Msa0872980 MtrunA17_Chr6g0454181 73.499 483 125 2 1 480 1 483 0.0 733
Msa0872980 MtrunA17_Chr6g0454291 75.157 479 116 2 4 479 1 479 0.0 724
Msa0872980 MtrunA17_Chr6g0454121 75.776 483 113 3 1 480 1 482 0.0 723
Msa0872980 MtrunA17_Chr8g0359821 74.120 483 120 4 1 480 1 481 0.0 723
Msa0872980 MtrunA17_Chr6g0454131 75.258 485 116 3 1 482 1 484 0.0 722
Msa0872980 MtrunA17_Chr6g0453951 72.107 484 131 3 1 480 47 530 0.0 721
Msa0872980 MtrunA17_Chr6g0454211 72.407 482 130 2 2 480 289 770 0.0 708
Msa0872980 MtrunA17_Chr6g0454211 59.599 349 56 5 131 476 1 267 4.96e-124 379
Msa0872980 MtrunA17_Chr6g0454361 73.760 484 123 3 1 480 1 484 0.0 707
Msa0872980 MtrunA17_Chr3g0078841 71.488 484 131 4 1 480 1 481 0.0 703
Msa0872980 MtrunA17_Chr6g0454201 74.587 484 119 3 1 480 1 484 0.0 699
Msa0872980 MtrunA17_Chr5g0423981 71.281 484 99 5 1 480 1 448 0.0 698
Msa0872980 MtrunA17_Chr6g0454301 71.014 483 133 4 1 479 254 733 0.0 696
Msa0872980 MtrunA17_Chr6g0454301 79.825 228 46 0 248 475 1 228 5.99e-128 388
Msa0872980 MtrunA17_Chr6g0454341 69.835 484 139 4 1 480 1 481 0.0 692
Msa0872980 MtrunA17_Chr8g0336331 70.248 484 136 5 1 480 1 480 0.0 687
Msa0872980 MtrunA17_Chr6g0454351 68.454 485 131 4 1 480 1 468 0.0 678
Msa0872980 MtrunA17_Chr7g0217881 70.455 484 120 4 1 480 1 465 0.0 672
Msa0872980 MtrunA17_Chr6g0454321 68.632 475 142 4 1 471 1 472 0.0 664
Msa0872980 MtrunA17_Chr6g0454321 72.800 125 34 0 2 126 496 620 2.73e-54 192
Msa0872980 MtrunA17_Chr6g0454251 69.367 395 118 2 4 395 1 395 0.0 583
Msa0872980 MtrunA17_Chr5g0426431 54.947 475 203 7 10 479 12 480 0.0 526
Msa0872980 MtrunA17_Chr3g0092641 54.105 475 207 7 9 478 11 479 0.0 521
Msa0872980 MtrunA17_Chr6g0454171 74.085 355 45 4 131 480 1 313 0.0 511
Msa0872980 MtrunA17_Chr2g0278711 53.222 481 210 7 7 480 8 480 1.70e-177 506
Msa0872980 MtrunA17_Chr3g0118771 48.637 477 234 6 7 477 18 489 1.02e-162 469
Msa0872980 MtrunA17_Chr3g0118691 47.023 487 247 6 2 482 7 488 1.24e-161 466
Msa0872980 MtrunA17_Chr3g0118671 47.699 478 239 6 6 477 2 474 1.67e-160 463
Msa0872980 MtrunA17_Chr6g0454271 73.793 290 73 2 194 480 1 290 4.03e-159 452
Msa0872980 MtrunA17_Chr3g0118711 46.347 479 246 6 5 477 8 481 2.55e-157 455
Msa0872980 MtrunA17_Chr3g0118701 46.473 482 247 6 2 477 7 483 8.56e-157 454
Msa0872980 MtrunA17_Chr4g0050341 48.025 481 239 6 8 480 17 494 1.74e-156 453
Msa0872980 MtrunA17_Chr8g0355011 58.398 387 114 4 97 480 23 365 2.07e-154 443
Msa0872980 MtrunA17_Chr3g0118661 47.368 475 240 5 7 476 10 479 3.62e-146 427
Msa0872980 MtrunA17_Chr3g0118751 45.493 477 222 7 6 477 2 445 3.23e-145 423
Msa0872980 MtrunA17_Chr6g0454221 83.406 229 37 1 248 475 1 229 8.80e-138 399
Msa0872980 MtrunA17_Chr5g0426401 56.452 310 128 5 175 478 4 312 2.08e-121 357
Msa0872980 MtrunA17_Chr6g0453981 68.831 231 69 2 131 358 1 231 9.77e-108 319
Msa0872980 MtrunA17_Chr3g0118721 50.847 295 139 4 194 482 1 295 7.35e-105 314
Msa0872980 MtrunA17_Chr6g0454231 63.922 255 52 4 225 477 3 219 6.75e-100 308
Msa0872980 MtrunA17_Chr6g0454231 61.765 238 86 2 1 236 241 475 4.30e-91 285
Msa0872980 MtrunA17_Chr6g0454281 71.795 195 55 0 1 195 1 195 6.20e-99 296
Msa0872980 MtrunA17_Chr6g0453941 68.018 222 67 3 132 349 54 275 4.54e-97 294
Msa0872980 MtrunA17_Chr6g0453941 69.841 63 14 2 1 62 1 59 5.01e-19 87.0
Msa0872980 MtrunA17_Chr8g0336271 59.274 248 94 4 1 245 1 244 3.03e-94 286
Msa0872980 MtrunA17_Chr6g0454371 76.437 174 41 0 307 480 1 174 1.07e-93 281
Msa0872980 MtrunA17_Chr3g0112771 36.211 475 258 12 12 477 14 452 1.40e-91 286
Msa0872980 MtrunA17_Chr5g0412111 35.642 491 256 12 9 474 4 459 7.99e-91 284
Msa0872980 MtrunA17_Chr5g0412131 36.049 491 259 14 9 476 11 469 1.11e-88 279
Msa0872980 MtrunA17_Chr5g0412101 34.908 487 271 13 9 476 11 470 1.54e-84 268
Msa0872980 MtrunA17_Chr3g0112761 34.591 477 265 15 12 477 10 450 1.01e-79 255
Msa0872980 MtrunA17_Chr8g0336261 81.752 137 25 0 307 443 1 137 1.12e-79 244
Msa0872980 MtrunA17_Chr6g0454111 73.292 161 39 3 171 327 23 183 1.06e-75 235
Msa0872980 MtrunA17_Chr4g0032331 32.773 476 275 13 12 477 10 450 7.59e-71 232
Msa0872980 MtrunA17_Chr4g0053501 31.070 486 286 18 12 479 13 467 5.62e-70 231
Msa0872980 MtrunA17_Chr1g0207981 31.111 495 300 16 5 481 6 477 1.47e-69 229
Msa0872980 MtrunA17_Chr1g0207971 31.070 486 286 15 5 476 3 453 5.02e-69 227
Msa0872980 MtrunA17_Chr7g0218841 31.501 473 276 13 9 473 5 437 1.53e-66 220
Msa0872980 MtrunA17_Chr7g0218831 30.064 469 287 10 9 473 5 436 2.19e-66 220
Msa0872980 MtrunA17_Chr1g0207831 32.165 485 278 16 12 476 10 463 3.32e-66 220
Msa0872980 MtrunA17_Chr7g0218811 30.851 470 283 12 9 473 14 446 4.05e-66 219
Msa0872980 MtrunA17_Chr7g0218821 31.648 455 261 13 9 445 4 426 6.07e-66 219
Msa0872980 MtrunA17_Chr6g0464881 30.408 490 282 14 9 480 10 458 2.35e-65 218
Msa0872980 MtrunA17_Chr5g0414331 30.271 479 278 16 10 473 13 450 1.71e-64 216
Msa0872980 MtrunA17_Chr5g0414321 30.435 483 280 17 10 477 11 452 7.11e-64 214
Msa0872980 MtrunA17_Chr7g0250001 30.992 484 285 13 6 477 2 448 4.85e-63 211
Msa0872980 MtrunA17_Chr3g0098111 29.713 488 305 14 5 476 4 469 5.80e-63 212
Msa0872980 MtrunA17_Chr8g0365811 30.957 491 283 17 12 476 497 957 5.93e-63 220
Msa0872980 MtrunA17_Chr8g0365811 29.980 497 300 14 4 476 3 475 7.20e-55 197
Msa0872980 MtrunA17_Chr7g0218791 29.079 478 286 12 9 473 4 441 6.31e-63 211
Msa0872980 MtrunA17_Chr4g0053321 30.303 495 294 17 5 479 19 482 1.08e-62 212
Msa0872980 MtrunA17_Chr5g0401721 30.143 491 275 20 19 477 17 471 1.09e-62 211
Msa0872980 MtrunA17_Chr1g0207951 30.992 484 288 14 6 476 120 570 2.27e-61 217
Msa0872980 MtrunA17_Chr1g0207951 31.198 484 281 17 12 476 658 1108 2.89e-55 199
Msa0872980 MtrunA17_Chr8g0377921 30.321 498 283 17 9 477 2 464 1.97e-60 205
Msa0872980 MtrunA17_Chr7g0249981 30.738 488 287 16 8 482 23 472 2.17e-60 205
Msa0872980 MtrunA17_Chr1g0207861 30.390 487 303 12 5 476 3 468 4.85e-60 204
Msa0872980 MtrunA17_Chr5g0431361 30.705 482 279 13 10 476 12 453 1.29e-59 202
Msa0872980 MtrunA17_Chr1g0161351 30.021 483 300 13 10 476 37 497 2.13e-59 203
Msa0872980 MtrunA17_Chr6g0464871 29.752 484 277 16 10 473 23 463 1.31e-58 200
Msa0872980 MtrunA17_Chr8g0380531 30.165 484 279 19 10 473 10 454 5.07e-58 198
Msa0872980 MtrunA17_Chr7g0275681 29.681 502 289 17 9 477 11 481 2.98e-57 197
Msa0872980 MtrunA17_Chr7g0265041 29.377 514 290 18 9 480 10 492 5.43e-57 196
Msa0872980 MtrunA17_Chr7g0243631 28.485 495 305 13 10 476 13 486 6.62e-57 196
Msa0872980 MtrunA17_Chr5g0431441 29.835 486 286 15 10 477 18 466 8.98e-57 195
Msa0872980 MtrunA17_Chr6g0464921 28.279 488 309 12 1 478 1 457 1.13e-56 195
Msa0872980 MtrunA17_Chr5g0431401 30.103 485 275 15 10 476 10 448 1.59e-56 194
Msa0872980 MtrunA17_Chr5g0431421 29.835 486 277 13 10 477 10 449 4.67e-56 193
Msa0872980 MtrunA17_Chr6g0464841 29.958 474 289 14 10 473 11 451 6.86e-56 192
Msa0872980 MtrunA17_Chr7g0243771 30.255 509 292 18 6 481 2 480 1.04e-55 193
Msa0872980 MtrunA17_Chr5g0393591 29.106 481 275 10 10 481 17 440 1.06e-55 192
Msa0872980 MtrunA17_Chr4g0044511 29.278 485 305 13 10 476 40 504 1.22e-55 193
Msa0872980 MtrunA17_Chr7g0243801 30.800 500 283 18 15 481 12 481 1.38e-55 192
Msa0872980 MtrunA17_Chr1g0207931 30.103 485 252 13 5 476 87 497 1.45e-55 193
Msa0872980 MtrunA17_Chr4g0011051 29.537 518 281 18 8 477 7 488 3.37e-55 192
Msa0872980 MtrunA17_Chr6g0454381 62.676 142 50 2 131 269 1 142 8.77e-55 180
Msa0872980 MtrunA17_Chr5g0419761 28.265 513 300 18 4 477 3 486 4.08e-54 189
Msa0872980 MtrunA17_Chr6g0462531 29.757 494 279 18 12 474 6 462 1.03e-53 187
Msa0872980 MtrunA17_Chr7g0243931 28.039 510 304 13 2 476 9 490 4.59e-53 186
Msa0872980 MtrunA17_Chr8g0377941 30.242 496 286 16 12 483 9 468 1.18e-52 184
Msa0872980 MtrunA17_Chr7g0265101 29.126 515 290 20 8 479 7 489 1.26e-52 185
Msa0872980 MtrunA17_Chr6g0449931 30.847 496 274 19 6 469 2 460 1.41e-52 184
Msa0872980 MtrunA17_Chr6g0462571 33.628 339 177 13 154 472 147 457 1.80e-52 184
Msa0872980 MtrunA17_Chr6g0464861 29.193 483 293 16 5 473 3 450 2.04e-52 183
Msa0872980 MtrunA17_Chr7g0232311 34.626 361 194 11 134 473 121 460 4.40e-52 182
Msa0872980 MtrunA17_Chr8g0373301 32.995 394 212 14 103 472 97 462 6.85e-52 182
Msa0872980 MtrunA17_Chr7g0265051 28.346 508 301 16 8 479 7 487 8.82e-52 182
Msa0872980 MtrunA17_Chr3g0121991 31.737 501 274 22 10 476 79 545 1.10e-51 183
Msa0872980 MtrunA17_Chr5g0431371 29.691 485 277 15 10 476 10 448 1.58e-51 181
Msa0872980 MtrunA17_Chr7g0249931 29.167 480 287 17 5 469 35 476 1.87e-51 181
Msa0872980 MtrunA17_Chr8g0366391 29.268 492 300 15 10 476 9 477 3.64e-51 181
Msa0872980 MtrunA17_Chr6g0462541 31.871 342 194 9 148 472 140 459 6.94e-51 180
Msa0872980 MtrunA17_Chr7g0243681 28.169 497 299 15 10 476 11 479 7.50e-51 180
Msa0872980 MtrunA17_Chr7g0243951 28.265 513 298 17 2 476 3 483 1.26e-50 179
Msa0872980 MtrunA17_Chr1g0179901 26.718 524 309 14 1 481 7 498 4.00e-50 178
Msa0872980 MtrunA17_Chr3g0106231 28.423 482 284 14 10 477 18 452 5.69e-50 177
Msa0872980 MtrunA17_Chr7g0265141 29.249 506 292 16 10 477 9 486 1.35e-49 176
Msa0872980 MtrunA17_Chr3g0122001 30.400 500 282 17 10 476 486 952 1.39e-49 182
Msa0872980 MtrunA17_Chr3g0122001 30.181 497 288 16 10 476 6 473 3.21e-49 181
Msa0872980 MtrunA17_Chr7g0243781 27.944 501 283 15 15 476 14 475 1.52e-49 176
Msa0872980 MtrunA17_Chr8g0336731 33.780 373 208 11 121 473 134 487 1.79e-49 176
Msa0872980 MtrunA17_Chr6g0462521 28.008 482 289 13 12 474 6 448 2.24e-49 175
Msa0872980 MtrunA17_Chr7g0232401 28.195 493 289 17 7 469 3 460 4.88e-49 175
Msa0872980 MtrunA17_Chr7g0243861 27.888 502 299 16 10 476 14 487 6.54e-49 175
Msa0872980 MtrunA17_Chr5g0419771 26.892 502 309 15 10 477 36 513 7.79e-49 175
Msa0872980 MtrunA17_Chr4g0060511 27.273 506 300 18 10 476 11 487 1.39e-48 174
Msa0872980 MtrunA17_Chr5g0426411 50.000 170 79 3 6 174 8 172 2.48e-48 164
Msa0872980 MtrunA17_Chr8g0335141 36.129 310 161 13 178 465 163 457 6.30e-48 172
Msa0872980 MtrunA17_Chr8g0336691 29.921 508 286 19 2 479 5 472 6.75e-48 177
Msa0872980 MtrunA17_Chr8g0336691 32.353 374 212 10 121 472 1021 1375 2.44e-47 176
Msa0872980 MtrunA17_Chr8g0336691 33.557 298 160 9 191 479 643 911 5.78e-40 154
Msa0872980 MtrunA17_Chr8g0336741 34.140 372 206 11 121 472 115 467 7.45e-48 171
Msa0872980 MtrunA17_Chr6g0462551 26.735 490 295 14 12 472 6 460 1.40e-47 171
Msa0872980 MtrunA17_Chr8g0347281 27.823 496 274 15 6 465 14 461 1.90e-47 171
Msa0872980 MtrunA17_Chr4g0014061 27.146 501 297 17 6 473 4 469 2.35e-47 170
Msa0872980 MtrunA17_Chr7g0265151 28.039 510 291 19 10 477 9 484 5.27e-47 169
Msa0872980 MtrunA17_Chr8g0336651 32.533 375 214 9 118 472 105 460 1.34e-46 174
Msa0872980 MtrunA17_Chr8g0336651 36.422 313 161 9 191 479 944 1242 3.24e-46 172
Msa0872980 MtrunA17_Chr8g0336651 35.115 262 128 8 227 479 545 773 1.05e-36 144
Msa0872980 MtrunA17_Chr8g0347271 28.630 489 279 15 6 465 15 462 2.56e-46 167
Msa0872980 MtrunA17_Chr5g0432731 35.577 312 162 11 185 477 6 297 2.58e-46 163
Msa0872980 MtrunA17_Chr6g0486251 30.219 503 271 24 6 472 2 460 3.43e-46 167
Msa0872980 MtrunA17_Chr6g0486201 30.219 503 271 24 6 472 2 460 3.43e-46 167
Msa0872980 MtrunA17_Chr4g0044501 28.226 496 297 17 10 476 10 475 3.71e-46 167
Msa0872980 MtrunA17_Chr4g0072761 32.468 385 226 11 99 476 95 452 4.50e-46 166
Msa0872980 MtrunA17_Chr7g0232391 30.728 371 221 10 121 472 108 461 2.24e-45 165
Msa0872980 MtrunA17_Chr1g0153451 28.884 502 288 16 6 479 2 462 2.41e-45 164
Msa0872980 MtrunA17_Chr7g0235051 27.181 493 269 14 10 469 11 446 3.57e-45 164
Msa0872980 MtrunA17_Chr5g0448551 26.622 447 287 12 7 444 4 418 5.36e-45 163
Msa0872980 MtrunA17_Chr8g0335161 34.688 320 172 13 175 472 158 462 7.04e-45 163
Msa0872980 MtrunA17_Chr5g0440421 28.295 516 309 19 1 477 1 494 7.22e-45 164
Msa0872980 MtrunA17_Chr8g0339461 32.796 372 203 12 121 465 109 460 7.98e-45 163
Msa0872980 MtrunA17_Chr8g0334851 29.072 485 291 16 6 465 2 458 8.44e-45 163
Msa0872980 MtrunA17_Chr6g0459311 29.821 503 273 22 6 472 9 467 1.33e-44 162
Msa0872980 MtrunA17_Chr1g0165701 27.054 499 300 15 11 476 16 483 2.23e-44 162
Msa0872980 MtrunA17_Chr7g0243871 27.466 517 288 18 7 481 6 477 3.88e-44 162
Msa0872980 MtrunA17_Chr4g0072771 28.221 489 287 16 7 476 22 465 4.83e-44 161
Msa0872980 MtrunA17_Chr8g0382021 27.699 491 285 15 15 476 39 488 4.95e-44 161
Msa0872980 MtrunA17_Chr8g0339631 29.756 410 241 13 86 469 73 461 1.36e-43 160
Msa0872980 MtrunA17_Chr8g0339601 37.008 254 125 8 227 455 66 309 2.26e-43 156
Msa0872980 MtrunA17_Chr8g0339451 32.447 376 207 11 121 469 101 456 3.93e-43 159
Msa0872980 MtrunA17_Chr2g0294921 27.327 505 297 17 15 483 165 635 4.21e-43 161
Msa0872980 MtrunA17_Chr8g0355221 25.657 495 315 13 11 476 16 486 4.23e-43 159
Msa0872980 MtrunA17_Chr7g0275511 26.283 487 303 14 4 465 9 464 1.02e-42 157
Msa0872980 MtrunA17_Chr1g0159551 25.466 483 297 15 15 476 19 459 1.07e-42 157
Msa0872980 MtrunA17_Chr5g0416741 27.129 505 292 15 12 476 15 483 1.13e-42 158
Msa0872980 MtrunA17_Chr3g0106251 32.154 311 181 9 178 477 3 294 1.16e-42 154
Msa0872980 MtrunA17_Chr2g0294931 27.112 509 299 19 15 483 16 492 1.60e-42 157
Msa0872980 MtrunA17_Chr5g0401851 25.769 520 305 15 1 476 1 483 2.09e-42 157
Msa0872980 MtrunA17_Chr7g0232411 32.381 315 159 11 199 472 160 461 2.59e-42 156
Msa0872980 MtrunA17_Chr5g0427561 77.273 88 20 0 393 480 1 88 3.71e-42 145
Msa0872980 MtrunA17_Chr5g0429711 27.236 492 298 17 7 476 8 461 4.07e-42 155
Msa0872980 MtrunA17_Chr7g0232331 28.969 359 209 8 121 455 108 444 5.66e-42 155
Msa0872980 MtrunA17_Chr8g0339441 40.099 202 101 4 284 465 217 418 6.82e-42 154
Msa0872980 MtrunA17_Chr7g0243761 28.247 485 289 17 10 476 11 454 7.54e-42 155
Msa0872980 MtrunA17_Chr8g0374931 27.327 505 297 17 15 483 16 486 8.98e-42 155
Msa0872980 MtrunA17_Chr1g0173121 27.366 486 293 16 12 476 16 462 1.04e-41 154
Msa0872980 MtrunA17_Chr5g0428081 27.435 503 297 19 15 483 16 484 1.31e-41 155
Msa0872980 MtrunA17_Chr8g0361371 28.458 506 283 19 6 473 3 467 2.18e-41 154
Msa0872980 MtrunA17_Chr4g0066221 26.389 504 290 20 15 476 16 480 3.10e-41 154
Msa0872980 MtrunA17_Chr5g0442561 25.832 511 300 18 7 477 2 473 6.01e-41 152
Msa0872980 MtrunA17_Chr6g0463891 26.181 508 297 16 11 476 13 484 7.33e-41 153
Msa0872980 MtrunA17_Chr1g0153461 39.614 207 108 4 283 472 2 208 7.76e-41 145
Msa0872980 MtrunA17_Chr3g0079731 34.722 288 139 9 222 474 205 478 1.85e-40 151
Msa0872980 MtrunA17_Chr7g0249961 38.696 230 125 7 248 469 31 252 1.98e-40 146
Msa0872980 MtrunA17_Chr7g0232341 28.412 359 211 9 121 455 108 444 2.00e-40 151
Msa0872980 MtrunA17_Chr8g0334861 32.268 313 164 12 191 473 166 460 4.24e-40 150
Msa0872980 MtrunA17_Chr4g0042891 30.398 352 208 12 142 474 130 463 2.13e-39 148
Msa0872980 MtrunA17_Chr5g0416821 27.160 486 305 17 12 476 16 473 3.01e-39 148
Msa0872980 MtrunA17_Chr4g0066201 27.075 506 283 19 15 483 23 479 3.32e-39 148
Msa0872980 MtrunA17_Chr5g0442541 26.931 505 295 19 7 477 2 466 3.93e-39 147
Msa0872980 MtrunA17_Chr5g0403641 37.089 213 112 4 285 475 289 501 5.20e-39 148
Msa0872980 MtrunA17_Chr7g0218311 26.693 502 301 18 15 483 21 488 6.37e-39 147
Msa0872980 MtrunA17_Chr6g0463851 25.000 508 312 17 15 483 16 493 9.58e-39 147
Msa0872980 MtrunA17_Chr7g0243851 32.847 274 162 7 224 476 170 442 1.42e-38 145
Msa0872980 MtrunA17_Chr8g0370941 25.670 522 294 21 7 474 5 486 1.59e-38 147
Msa0872980 MtrunA17_Chr7g0265111 26.000 500 316 16 10 477 39 516 3.49e-38 146
Msa0872980 MtrunA17_Chr4g0066131 26.565 527 282 18 6 483 9 479 5.51e-38 144
Msa0872980 MtrunA17_Chr4g0044521 31.699 306 178 11 197 474 162 464 7.05e-38 144
Msa0872980 MtrunA17_Chr8g0374901 26.036 507 301 19 13 483 15 483 1.79e-37 143
Msa0872980 MtrunA17_Chr4g0066261 26.419 511 294 19 15 483 16 486 2.02e-37 143
Msa0872980 MtrunA17_Chr8g0334831 27.992 493 268 18 6 452 2 453 4.04e-37 142
Msa0872980 MtrunA17_Chr4g0066281 26.535 505 297 18 3 476 5 466 6.26e-37 141
Msa0872980 MtrunA17_Chr7g0243711 32.800 250 140 6 249 476 73 316 9.61e-36 135
Msa0872980 MtrunA17_Chr5g0448521 25.486 514 293 19 7 477 2 468 1.09e-35 138
Msa0872980 MtrunA17_Chr8g0336321 26.623 462 301 14 4 450 1 439 1.14e-35 138
Msa0872980 MtrunA17_Chr2g0329111 26.482 506 301 18 7 473 3 476 2.07e-35 137
Msa0872980 MtrunA17_Chr8g0350881 26.148 501 300 19 12 476 14 480 3.94e-35 137
Msa0872980 MtrunA17_Chr5g0442601 27.665 394 224 17 120 477 508 876 1.34e-34 138
Msa0872980 MtrunA17_Chr5g0442601 27.184 309 175 9 122 417 62 333 1.35e-23 104
Msa0872980 MtrunA17_Chr4g0066151 26.266 533 274 18 1 476 9 479 1.74e-34 135
Msa0872980 MtrunA17_Chr8g0336251 26.407 462 302 14 4 450 1 439 1.87e-34 134
Msa0872980 MtrunA17_Chr5g0442521 23.633 512 320 14 7 481 2 479 2.12e-34 134
Msa0872980 MtrunA17_Chr8g0374941 25.198 504 299 19 13 476 952 1417 4.18e-34 137
Msa0872980 MtrunA17_Chr8g0374941 25.311 482 288 18 13 457 479 925 2.26e-32 131
Msa0872980 MtrunA17_Chr8g0374941 24.742 485 287 19 13 457 14 460 8.95e-31 127
Msa0872980 MtrunA17_Chr2g0302961 28.297 364 211 11 135 476 130 465 5.04e-34 133
Msa0872980 MtrunA17_Chr5g0442581 26.062 518 304 18 7 482 2 482 5.76e-34 134
Msa0872980 MtrunA17_Chr4g0042931 26.122 490 302 20 10 474 7 461 5.82e-34 133
Msa0872980 MtrunA17_Chr2g0294941 28.099 363 213 12 124 457 17 360 6.48e-34 131
Msa0872980 MtrunA17_Chr8g0374971 24.254 503 305 17 13 476 15 480 7.01e-34 133
Msa0872980 MtrunA17_Chr2g0302991 28.571 364 214 11 135 476 123 462 1.53e-33 132
Msa0872980 MtrunA17_Chr5g0410941 25.304 494 305 16 15 476 28 489 2.71e-33 132
Msa0872980 MtrunA17_Chr5g0420801 27.912 498 291 24 1 473 1 455 3.75e-33 130
Msa0872980 MtrunA17_Chr5g0431431 35.036 274 146 10 185 449 110 360 3.79e-33 129
Msa0872980 MtrunA17_Chr5g0429681 26.721 494 299 18 6 473 40 496 3.98e-33 131
Msa0872980 MtrunA17_Chr5g0442491 25.344 509 307 20 7 477 2 475 5.77e-33 130
Msa0872980 MtrunA17_Chr4g0044481 27.146 431 235 14 10 419 27 399 1.12e-32 129
Msa0872980 MtrunA17_Chr7g0243611 33.047 233 138 7 202 423 52 277 1.26e-32 125
Msa0872980 MtrunA17_Chr8g0369341 26.494 502 305 19 1 474 1 466 2.39e-32 129
Msa0872980 MtrunA17_Chr6g0463861 25.806 496 296 19 15 476 16 473 3.14e-32 128
Msa0872980 MtrunA17_Chr5g0442511 30.466 279 151 12 225 473 225 490 6.50e-32 127
Msa0872980 MtrunA17_Chr6g0482061 25.896 502 302 15 10 475 11 478 7.77e-32 127
Msa0872980 MtrunA17_Chr7g0243911 36.364 198 108 4 271 451 9 205 1.35e-31 121
Msa0872980 MtrunA17_Chr7g0243811 27.139 409 237 13 22 410 1 368 1.28e-30 122
Msa0872980 MtrunA17_Chr4g0066171 25.743 505 290 16 15 483 26 481 1.59e-30 124
Msa0872980 MtrunA17_Chr3g0079711 35.326 184 99 4 311 474 3 186 2.05e-30 117
Msa0872980 MtrunA17_Chr8g0361411 25.934 482 310 18 8 476 6 453 3.26e-30 122
Msa0872980 MtrunA17_Chr7g0241801 40.000 175 90 5 285 453 241 406 4.08e-30 122
Msa0872980 MtrunA17_Chr7g0241781 40.571 175 89 5 285 453 241 406 4.72e-30 121
Msa0872980 MtrunA17_Chr2g0307961 35.025 197 117 5 287 478 280 470 8.28e-30 121
Msa0872980 MtrunA17_Chr5g0427571 32.328 232 146 5 228 450 44 273 1.00e-29 118
Msa0872980 MtrunA17_Chr2g0278721 41.379 174 93 5 287 454 785 955 6.29e-29 120
Msa0872980 MtrunA17_Chr2g0278721 36.416 173 101 5 287 453 274 443 1.28e-22 101
Msa0872980 MtrunA17_Chr1g0207881 34.595 185 96 4 322 483 209 391 3.90e-28 115
Msa0872980 MtrunA17_Chr7g0231631 32.035 231 144 5 253 476 35 259 2.48e-27 110
Msa0872980 MtrunA17_Chr3g0092031 35.028 177 106 4 283 453 2 175 3.12e-27 108
Msa0872980 MtrunA17_Chr7g0232351 34.914 232 100 10 200 394 161 378 1.57e-26 110
Msa0872980 MtrunA17_Chr5g0409591 29.020 255 142 8 222 443 205 453 6.84e-26 110
Msa0872980 MtrunA17_Chr6g0454391 67.692 65 21 0 369 433 11 75 9.80e-26 101
Msa0872980 MtrunA17_Chr4g0069611 36.416 173 101 5 287 453 269 438 5.91e-25 107
Msa0872980 MtrunA17_Chr6g0466831 36.111 180 106 5 280 453 265 441 1.91e-24 105
Msa0872980 MtrunA17_Chr6g0464091 24.380 484 290 18 2 453 9 448 3.62e-24 105
Msa0872980 MtrunA17_Chr8g0337381 42.623 122 64 2 355 472 2 121 9.76e-24 96.7
Msa0872980 MtrunA17_Chr8g0367221 24.839 467 301 14 6 452 1284 1720 1.61e-23 104
Msa0872980 MtrunA17_Chr8g0367221 35.429 175 104 4 286 452 1057 1230 1.47e-21 99.0
Msa0872980 MtrunA17_Chr8g0367221 33.143 175 108 4 286 452 270 443 7.94e-21 96.7
Msa0872980 MtrunA17_Chr6g0466841 34.831 178 107 5 282 453 267 441 3.42e-23 102
Msa0872980 MtrunA17_Chr2g0302851 34.270 178 108 5 282 453 265 439 8.17e-22 98.2
Msa0872980 MtrunA17_Chr4g0039881 34.270 178 108 5 282 453 241 415 1.73e-21 96.7
Msa0872980 MtrunA17_Chr8g0357361 33.333 201 118 6 226 419 60 251 2.21e-21 94.0
Msa0872980 MtrunA17_Chr7g0250021 26.706 337 204 12 5 331 7 310 2.29e-21 95.1
Msa0872980 MtrunA17_Chr2g0278741 35.260 173 103 5 287 453 356 525 1.32e-20 94.7
Msa0872980 MtrunA17_Chr3g0118741 60.345 58 23 0 6 63 2 59 1.34e-20 85.9
Msa0872980 MtrunA17_Chr4g0066141 35.664 143 76 3 355 483 216 356 4.26e-20 91.7
Msa0872980 MtrunA17_Chr1g0196851 29.570 186 118 6 281 453 291 476 3.21e-19 90.5
Msa0872980 MtrunA17_Chr4g0029131 29.609 179 113 5 281 446 251 429 9.06e-18 86.3
Msa0872980 MtrunA17_Chr4g0040691 26.778 239 161 6 256 480 223 461 2.31e-17 84.3
Msa0872980 MtrunA17_Chr2g0283041 21.983 464 289 17 10 445 7 425 6.42e-16 80.1
Msa0872980 MtrunA17_Chr4g0040711 26.761 213 141 6 256 453 223 435 1.61e-15 78.6
Msa0872980 MtrunA17_Chr4g0029151 27.933 179 116 5 281 446 259 437 1.93e-15 78.6
Msa0872980 MtrunA17_Chr7g0243731 38.356 73 45 0 347 419 1 73 5.74e-14 67.0
Msa0872980 MtrunA17_Chr2g0319761 28.415 183 121 5 281 453 253 435 6.17e-14 73.9
Msa0872980 MtrunA17_Chr6g0454241 73.171 41 11 0 436 476 1 41 1.47e-13 66.2
Msa0872980 MtrunA17_Chr6g0454241 71.795 39 11 0 174 212 39 77 3.25e-11 59.3
Msa0872980 MtrunA17_Chr7g0267931 56.140 57 18 2 1 50 5 61 2.15e-13 65.1
Msa0872980 MtrunA17_Chr2g0319791 27.473 182 122 5 281 452 253 434 5.91e-13 70.9
Msa0872980 MtrunA17_Chr2g0319751 26.923 182 123 5 281 452 730 911 7.33e-12 68.2
Msa0872980 MtrunA17_Chr3g0118731 33.333 111 69 2 62 172 28 133 1.01e-11 63.2
Msa0872980 MtrunA17_Chr1g0207911 27.626 257 153 12 12 257 10 244 1.21e-11 65.1
Msa0872980 MtrunA17_Chr6g0454311 54.902 51 21 1 176 224 6 56 1.34e-11 59.7
Msa0872980 MtrunA17_Chr8g0334841 28.824 170 103 5 191 354 1 158 1.71e-11 62.8
Msa0872980 MtrunA17_Chr2g0319801 27.624 181 124 4 281 458 253 429 2.89e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0872980 AT1G22400.1 51.559 481 221 7 7 480 10 485 2.78e-179 511
Msa0872980 AT1G22340.1 51.037 482 224 7 7 481 10 486 1.30e-176 505
Msa0872980 AT1G22360.1 51.240 484 225 6 1 478 1 479 1.94e-175 501
Msa0872980 AT1G22380.1 50.415 482 228 6 6 481 9 485 5.04e-173 496
Msa0872980 AT1G22370.2 52.301 478 212 7 7 478 10 477 9.55e-169 484
Msa0872980 AT1G22360.2 49.587 484 221 7 1 478 1 467 7.25e-166 477
Msa0872980 AT1G78270.1 49.167 480 231 9 5 477 8 481 1.20e-163 472
Msa0872980 AT1G22370.1 53.821 301 133 4 184 478 7 307 1.54e-106 320
Msa0872980 AT5G59590.1 36.250 480 259 13 7 476 7 449 1.76e-90 283
Msa0872980 AT5G59580.1 35.625 480 259 14 8 476 7 447 5.15e-86 272
Msa0872980 AT3G46670.1 35.010 477 268 11 6 473 2 445 3.86e-83 264
Msa0872980 AT3G11340.1 32.917 480 275 12 6 477 5 445 3.19e-82 262
Msa0872980 AT3G46660.1 34.100 478 273 11 6 473 7 452 1.48e-80 258
Msa0872980 AT5G05860.1 31.924 473 286 7 10 478 9 449 5.01e-80 256
Msa0872980 AT5G05880.1 32.272 471 279 10 10 473 8 445 6.18e-79 253
Msa0872980 AT5G05900.1 32.553 470 278 10 10 473 8 444 6.21e-79 253
Msa0872980 AT3G46680.1 33.678 484 263 13 6 473 5 446 5.73e-78 251
Msa0872980 AT5G38010.1 33.750 480 287 10 1 476 1 453 5.10e-77 248
Msa0872980 AT2G36970.1 31.250 496 295 14 1 476 1 470 7.14e-76 246
Msa0872980 AT5G05890.1 32.700 474 277 10 10 473 8 449 7.37e-76 245
Msa0872980 AT5G05870.1 33.333 477 278 12 10 476 8 454 8.50e-76 246
Msa0872980 AT3G46700.1 32.563 476 278 11 7 476 6 444 1.35e-75 244
Msa0872980 AT3G46690.1 34.029 479 268 13 7 474 6 447 2.03e-75 244
Msa0872980 AT5G38040.1 32.334 467 271 14 19 476 19 449 3.59e-75 243
Msa0872980 AT3G46650.1 32.645 484 256 13 1 471 1 427 1.19e-74 242
Msa0872980 AT3G46720.1 33.195 482 268 13 1 473 1 437 2.90e-73 238
Msa0872980 AT3G55700.1 33.264 481 277 13 7 477 5 451 3.33e-73 239
Msa0872980 AT2G26480.1 31.084 489 276 16 7 479 5 448 1.75e-67 223
Msa0872980 AT4G15490.1 30.444 496 295 14 7 481 5 471 2.89e-65 218
Msa0872980 AT2G28080.1 30.480 479 295 14 15 481 23 475 3.72e-65 218
Msa0872980 AT3G55710.1 32.311 489 275 17 7 477 5 455 4.17e-65 218
Msa0872980 AT3G21560.1 31.263 499 285 19 9 481 11 477 3.83e-64 216
Msa0872980 AT4G15500.1 30.061 489 289 16 9 477 8 463 5.21e-64 215
Msa0872980 AT4G15480.1 31.313 495 273 18 10 474 19 476 1.82e-63 214
Msa0872980 AT1G05680.1 30.169 474 291 13 10 473 6 449 5.05e-62 209
Msa0872980 AT3G02100.1 29.228 479 305 13 2 473 5 456 6.83e-62 209
Msa0872980 AT2G31790.1 31.006 487 278 14 7 473 5 453 1.40e-61 208
Msa0872980 AT1G05675.1 30.021 473 293 12 10 473 6 449 2.45e-60 204
Msa0872980 AT4G01070.1 30.909 495 277 14 7 472 5 463 2.75e-59 202
Msa0872980 AT2G43820.1 29.980 497 273 19 7 479 4 449 1.41e-57 197
Msa0872980 AT2G31750.1 29.435 496 282 19 6 477 4 455 6.36e-57 196
Msa0872980 AT2G23250.1 31.356 472 267 17 19 476 7 435 9.81e-57 195
Msa0872980 AT2G31750.2 29.435 496 282 19 6 477 4 455 1.14e-56 196
Msa0872980 AT2G36800.1 30.845 509 279 19 10 477 12 488 2.23e-56 195
Msa0872980 AT4G34131.1 27.711 498 317 14 1 475 1 478 2.38e-56 195
Msa0872980 AT3G53160.1 31.287 505 281 21 10 477 8 483 7.90e-56 194
Msa0872980 AT2G30140.1 29.876 482 280 16 10 476 13 451 2.34e-55 191
Msa0872980 AT2G30140.2 29.876 482 279 16 10 476 13 450 3.81e-55 191
Msa0872980 AT2G43840.2 29.268 492 281 17 8 479 5 449 1.37e-54 189
Msa0872980 AT2G43840.1 29.268 492 281 17 8 479 5 449 2.43e-54 189
Msa0872980 AT2G36790.1 32.200 500 283 19 10 477 13 488 3.39e-54 189
Msa0872980 AT2G36760.1 29.183 514 280 20 10 477 14 489 1.55e-53 187
Msa0872980 AT2G23260.1 28.717 491 301 16 1 478 1 455 2.46e-53 186
Msa0872980 AT2G36770.1 27.553 519 282 19 10 477 14 489 2.49e-53 187
Msa0872980 AT2G36780.1 29.159 511 284 20 10 477 14 489 1.86e-52 185
Msa0872980 AT1G05560.1 27.459 488 294 14 9 476 4 451 3.62e-52 183
Msa0872980 AT2G15480.1 28.039 510 311 16 1 480 1 484 9.70e-52 182
Msa0872980 AT5G66690.1 28.185 518 284 19 8 483 5 476 1.26e-51 182
Msa0872980 AT1G05560.2 27.459 488 294 14 9 476 54 501 1.31e-51 183
Msa0872980 AT2G30150.2 30.126 478 285 13 10 476 13 452 1.43e-51 181
Msa0872980 AT3G16520.3 29.106 481 295 15 12 475 7 458 1.91e-50 179
Msa0872980 AT3G53150.1 28.205 507 313 14 7 477 19 510 2.15e-50 179
Msa0872980 AT2G15480.2 27.692 520 310 17 1 480 1 494 2.61e-50 179
Msa0872980 AT2G30150.1 30.021 473 282 13 15 476 2 436 2.84e-50 177
Msa0872980 AT2G15490.3 28.974 497 305 17 10 480 7 481 3.50e-50 178
Msa0872980 AT2G36750.1 29.167 504 292 17 10 477 10 484 4.52e-50 178
Msa0872980 AT1G30530.1 27.515 487 305 13 1 474 1 452 9.96e-50 176
Msa0872980 AT5G26310.1 27.112 509 283 16 8 475 5 466 1.35e-49 177
Msa0872980 AT2G15490.1 28.800 500 305 18 10 480 7 484 2.75e-49 176
Msa0872980 AT3G16520.1 29.437 462 280 15 12 456 7 439 3.69e-49 175
Msa0872980 AT3G16520.2 29.437 462 280 15 12 456 7 439 4.26e-49 174
Msa0872980 AT1G24100.1 28.827 503 271 16 8 476 9 458 2.49e-48 173
Msa0872980 AT4G15550.1 28.455 492 296 18 9 475 12 472 2.51e-48 173
Msa0872980 AT5G17050.1 28.302 477 308 11 7 477 9 457 4.61e-48 172
Msa0872980 AT4G14090.1 28.745 494 286 18 3 475 6 454 4.67e-48 172
Msa0872980 AT1G01420.2 29.652 489 286 17 9 472 10 465 4.28e-47 170
Msa0872980 AT1G10400.1 29.508 488 295 19 7 475 4 461 5.19e-47 169
Msa0872980 AT1G01420.1 29.652 489 286 17 9 472 7 462 6.03e-47 169
Msa0872980 AT4G34135.1 26.953 512 302 16 2 475 3 480 4.05e-46 167
Msa0872980 AT4G34138.1 28.378 518 284 20 8 481 9 483 4.16e-46 167
Msa0872980 AT2G16890.2 29.116 498 283 19 10 476 9 467 5.02e-46 167
Msa0872980 AT1G01390.1 30.081 492 291 16 9 479 7 466 9.89e-46 166
Msa0872980 AT1G01390.2 30.081 492 291 16 9 479 24 483 1.70e-45 166
Msa0872980 AT5G17040.1 26.875 480 295 12 10 477 5 440 2.98e-45 164
Msa0872980 AT1G05530.1 26.210 496 297 15 8 477 3 455 5.04e-45 164
Msa0872980 AT5G17040.2 30.363 303 196 5 179 477 47 338 2.66e-44 159
Msa0872980 AT3G50740.1 27.756 508 281 20 8 472 5 469 1.52e-43 160
Msa0872980 AT5G37950.1 30.890 382 213 15 25 394 1 343 1.31e-42 155
Msa0872980 AT3G21800.1 27.711 498 298 13 12 476 7 475 1.62e-42 157
Msa0872980 AT5G17030.1 28.611 360 233 9 124 477 115 456 2.44e-42 156
Msa0872980 AT5G03490.1 28.807 486 289 19 7 475 16 461 2.60e-42 157
Msa0872980 AT5G14860.1 27.799 518 273 18 10 476 8 475 3.17e-42 157
Msa0872980 AT3G22250.1 25.322 466 294 13 7 448 5 440 3.95e-41 153
Msa0872980 AT5G37950.2 30.446 381 210 14 25 394 1 337 4.38e-41 150
Msa0872980 AT3G21760.1 26.400 500 308 14 12 476 6 480 1.93e-40 152
Msa0872980 AT4G15260.1 29.380 371 212 13 135 477 7 355 2.90e-39 146
Msa0872980 AT4G15280.1 29.000 400 232 13 109 477 96 474 1.03e-38 147
Msa0872980 AT4G15280.2 29.000 400 232 13 109 477 128 506 1.29e-38 147
Msa0872980 AT2G18560.1 32.000 325 178 11 173 469 60 369 2.34e-38 144
Msa0872980 AT4G36770.1 28.361 476 278 18 10 457 4 444 2.51e-38 145
Msa0872980 AT3G21780.1 29.250 400 236 12 104 476 89 468 2.75e-38 145
Msa0872980 AT2G18570.1 26.104 498 291 18 8 469 3 459 3.87e-38 145
Msa0872980 AT2G29740.1 26.923 494 309 15 6 473 4 471 4.73e-38 145
Msa0872980 AT3G21790.1 29.676 401 237 11 104 476 95 478 1.69e-37 144
Msa0872980 AT3G21750.1 29.177 401 219 13 111 477 100 469 1.28e-36 141
Msa0872980 AT2G29710.1 30.682 264 161 8 226 477 210 463 1.33e-36 141
Msa0872980 AT2G29730.1 30.303 264 161 7 226 477 211 463 4.29e-36 139
Msa0872980 AT2G16890.3 27.840 449 255 18 10 428 9 418 1.46e-35 137
Msa0872980 AT1G07260.1 28.226 372 232 12 122 477 120 472 1.10e-34 135
Msa0872980 AT2G29750.1 26.166 493 309 15 12 477 10 474 3.01e-34 134
Msa0872980 AT1G07250.1 31.579 266 156 8 227 477 219 473 6.81e-34 133
Msa0872980 AT1G73880.1 27.984 511 282 20 3 477 7 467 1.34e-33 132
Msa0872980 AT1G51210.1 27.790 457 275 18 8 451 18 432 2.82e-33 131
Msa0872980 AT5G65550.1 27.010 485 289 19 4 461 1 447 2.36e-31 126
Msa0872980 AT5G12890.1 28.073 545 266 29 4 481 1 486 3.49e-30 123
Msa0872980 AT1G07240.1 29.670 273 166 8 222 477 213 476 9.34e-30 122
Msa0872980 AT5G49690.1 24.736 473 293 17 1 452 1 431 1.09e-27 115
Msa0872980 AT1G06000.1 27.925 265 170 7 229 478 177 435 6.68e-24 104
Msa0872980 AT4G01070.2 28.490 351 201 12 7 344 5 318 9.43e-23 99.8
Msa0872980 AT2G22590.1 35.829 187 108 5 274 452 264 446 1.56e-21 97.8
Msa0872980 AT4G34135.2 25.490 357 206 13 2 331 3 326 2.65e-21 95.1
Msa0872980 AT4G09500.2 24.733 469 280 19 6 453 2 418 1.66e-18 88.2
Msa0872980 AT4G09500.1 30.899 178 111 5 286 453 218 393 3.73e-18 87.0
Msa0872980 AT4G27570.1 31.788 151 93 4 281 427 244 388 3.96e-18 87.0
Msa0872980 AT3G29630.2 32.544 169 104 4 287 451 220 382 5.51e-18 86.7
Msa0872980 AT3G29630.1 32.544 169 104 4 287 451 246 408 6.29e-18 86.7
Msa0872980 AT4G27560.1 31.126 151 94 4 281 427 244 388 1.58e-17 85.5
Msa0872980 AT1G64910.1 30.366 191 117 6 287 465 244 430 1.89e-17 85.1
Msa0872980 AT5G53990.1 31.944 144 92 3 286 427 243 382 2.39e-17 84.7
Msa0872980 AT5G54010.1 31.210 157 98 4 286 438 249 399 1.12e-16 82.8
Msa0872980 AT2G22930.1 29.240 171 109 5 293 453 250 418 5.48e-16 80.5
Msa0872980 AT1G50580.1 31.250 160 96 4 266 420 230 380 9.47e-16 79.7
Msa0872980 AT1G64920.1 28.261 184 112 5 286 453 243 422 1.66e-14 75.9
Msa0872980 AT5G54060.1 31.285 179 111 5 281 447 262 440 5.44e-14 74.3

Find 104 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACATAAACAACGGATTT+TGG 0.155850 6_1:-8620531 None:intergenic
CATGGGGAAAAGAGAATAAT+TGG 0.187823 6_1:-8619525 None:intergenic
CATCTTTAGATTCTAATCTT+TGG 0.240223 6_1:+8620466 Msa0872980:CDS
ATTAGGCCTGATCTTGTTAT+TGG 0.251913 6_1:+8620642 Msa0872980:CDS
TTATCTAACAAATGGATATT+TGG 0.252522 6_1:+8620185 Msa0872980:CDS
TCCGTTGTTTATGTAAATTT+TGG 0.260932 6_1:+8620537 Msa0872980:CDS
AGGATCTTCCTGATTTAATA+AGG 0.280425 6_1:+8620253 Msa0872980:CDS
TCAGCAGCATCTACTGTAAA+TGG 0.295141 6_1:-8619489 None:intergenic
GTTTCAACAATGCATTGATA+TGG 0.308101 6_1:-8619155 None:intergenic
GAACTTGGACAAAGTGATTA+AGG 0.324980 6_1:+8621055 Msa0872980:CDS
CAAGCGTTTGTGATTATATT+CGG 0.327833 6_1:-8619226 None:intergenic
CAAGAAATTCACGGAAGAAT+TGG 0.336275 6_1:-8619395 None:intergenic
GTTAGAGTTTGCTTGGGGTT+TGG 0.342939 6_1:+8620590 Msa0872980:CDS
ACTAAAGTTGACGGGATTCC+AGG 0.346600 6_1:+8620210 Msa0872980:CDS
GGAAAATTACTTCACCTTAG+AGG 0.347989 6_1:+8619180 Msa0872980:CDS
GTGGACACCAACTTGCTATT+AGG 0.356812 6_1:-8620716 None:intergenic
ATTTGCGAAGAATGGGAGAT+TGG 0.369050 6_1:+8620879 Msa0872980:CDS
AGAGGTGAAAATGCCTTTGA+TGG 0.371898 6_1:+8619258 Msa0872980:CDS
TCAGAAACTAAGCAAGTAAC+TGG 0.372843 6_1:-8619456 None:intergenic
TTGAAAGAAATTTCAGATAG+AGG 0.375107 6_1:+8620693 Msa0872980:CDS
AGGTTATGTGAAAGCCTCTA+AGG 0.390826 6_1:-8619194 None:intergenic
GTAGAATTATTTGCGAAGAA+TGG 0.398088 6_1:+8620871 Msa0872980:CDS
GATGGTTTAACTCCAATTGA+TGG 0.401586 6_1:+8619312 Msa0872980:CDS
TTACTAGGCATTGTTTCAAA+AGG 0.403005 6_1:+8621218 Msa0872980:three_prime_UTR
TTAACTCCATTTCCAGTTCA+AGG 0.403092 6_1:+8619132 Msa0872980:CDS
TTCCCTTCTCTATACACAAT+TGG 0.403251 6_1:+8620399 Msa0872980:CDS
ACTTATACTAACTTTAACAT+TGG 0.409772 6_1:+8619055 Msa0872980:five_prime_UTR
GAAATTGTTAGAGTTTGCTT+GGG 0.411975 6_1:+8620584 Msa0872980:CDS
TAGAATTATTTGCGAAGAAT+GGG 0.416190 6_1:+8620872 Msa0872980:CDS
AGAAATTGTTAGAGTTTGCT+TGG 0.416951 6_1:+8620583 Msa0872980:CDS
AGGATGCTTAATAAATTCCT+TGG 0.422859 6_1:-8621306 None:intergenic
ATATGGCCTTGAACTGGAAA+TGG 0.427004 6_1:-8619138 None:intergenic
TTTGCGAAGAATGGGAGATT+GGG 0.429782 6_1:+8620880 Msa0872980:CDS
CCATTCATAACACAAAATAA+AGG 0.435454 6_1:-8621326 None:intergenic
AGGCCTGATCTTGTTATTGG+TGG 0.439995 6_1:+8620645 Msa0872980:CDS
GAAACTTATCAATGAATTGA+TGG 0.440290 6_1:+8620941 Msa0872980:CDS
TCAATTGGAGTTAAACCATC+TGG 0.447025 6_1:-8619309 None:intergenic
GATGAGAGTTATCTAACAAA+TGG 0.452799 6_1:+8620177 Msa0872980:intron
TAAGTTTAGCAAGAAATTCA+CGG 0.470068 6_1:-8619404 None:intergenic
ACATTGCCATCACCATCAAT+TGG 0.470752 6_1:-8619324 None:intergenic
ATTTCTAAATTGTTTCAGAA+TGG 0.472873 6_1:+8619579 Msa0872980:CDS
AGGAAAGAAGATGAGGCAAA+AGG 0.473475 6_1:+8620974 Msa0872980:CDS
GAGCCACCAATAACAAGATC+AGG 0.474390 6_1:-8620648 None:intergenic
GAATTGATGGTGGGAGAGAA+AGG 0.475632 6_1:+8620954 Msa0872980:CDS
GCATTGATATGGCCTTGAAC+TGG 0.489235 6_1:-8619144 None:intergenic
TTTGCTTTAATAGAAAGATA+AGG 0.490118 6_1:-8619031 None:intergenic
AAGATACTAAATGTCTTGAA+TGG 0.490321 6_1:+8620493 Msa0872980:CDS
TACTAGGCATTGTTTCAAAA+GGG 0.490837 6_1:+8621219 Msa0872980:three_prime_UTR
CAAATAATTCTACTGCTAAG+TGG 0.494895 6_1:-8620861 None:intergenic
ATTTGGACACTAAAGTTGAC+GGG 0.501991 6_1:+8620202 Msa0872980:CDS
ATGGGGAAAAGAGAATAATT+GGG 0.504529 6_1:-8619524 None:intergenic
AGGAAGTAACATGCACTACA+TGG 0.513715 6_1:-8619543 None:intergenic
TACCTCCTCTCTCTTTACAT+TGG 0.514594 6_1:-8620916 None:intergenic
GTCAAGAATCCACCGATTGA+AGG 0.516692 6_1:-8620759 None:intergenic
GGGCCAATTGTGTATAGAGA+AGG 0.518631 6_1:-8620402 None:intergenic
TGGTTCAAAACTTTCTCTTG+TGG 0.536554 6_1:-8620735 None:intergenic
TATTTGGACACTAAAGTTGA+CGG 0.541849 6_1:+8620201 Msa0872980:CDS
CTTAATGACTCTGCTACTGC+TGG 0.545833 6_1:+8619423 Msa0872980:CDS
GCCAAAATTTACATAAACAA+CGG 0.554342 6_1:-8620538 None:intergenic
AATGGTGTGCTACCACCTAA+AGG 0.558297 6_1:+8619597 Msa0872980:CDS
ACCATCTGGAATAGTCTCAA+AGG 0.560749 6_1:-8619295 None:intergenic
GATTCTTGACTCATTGCGGA+TGG 0.560761 6_1:+8620772 Msa0872980:CDS
ACCACTGAAAGTGTATGCGC+TGG 0.561142 6_1:+8620801 Msa0872980:CDS
ATTATATTCGGTGTTGACAA+AGG 0.565866 6_1:-8619214 None:intergenic
TAGAAATGTGAAAATTTGAG+AGG 0.568966 6_1:-8619563 None:intergenic
TCAAGAATCCACCGATTGAA+GGG 0.571967 6_1:-8620758 None:intergenic
CTTATCAATGAATTGATGGT+GGG 0.574899 6_1:+8620945 Msa0872980:CDS
ACCTTTGAGACTATTCCAGA+TGG 0.575497 6_1:+8619294 Msa0872980:CDS
TTGAACCACCCTTCAATCGG+TGG 0.576079 6_1:+8620750 Msa0872980:CDS
AGTATTGATAACAATGGCAG+AGG 0.576162 6_1:-8620334 None:intergenic
CTGGAGTGCCAATGTTGTGT+TGG 0.578011 6_1:+8620820 Msa0872980:CDS
TAATTCTACTGCTAAGTGGT+TGG 0.579206 6_1:-8620857 None:intergenic
GGCCAATTGTGTATAGAGAA+GGG 0.581539 6_1:-8620401 None:intergenic
TGGTAGTTCATACATGAACT+TGG 0.582019 6_1:+8621040 Msa0872980:CDS
GGCCACGGAGTTGAAGAAGA+AGG 0.584340 6_1:+8620995 Msa0872980:CDS
GAGAGAAAGGAAAGAAGATG+AGG 0.584946 6_1:+8620967 Msa0872980:CDS
GGAGTTGAAGAAGAAGGCAG+AGG 0.585984 6_1:+8621001 Msa0872980:CDS
TGCCTTCTTCTTCAACTCCG+TGG 0.587057 6_1:-8620997 None:intergenic
GTTGAAGAAGAAGGCAGAGG+AGG 0.588016 6_1:+8621004 Msa0872980:CDS
GAAGATGAGGCAAAAGGCCA+CGG 0.589843 6_1:+8620980 Msa0872980:CDS
GGAAGTAACATGCACTACAT+GGG 0.593312 6_1:-8619542 None:intergenic
ACTTATCAATGAATTGATGG+TGG 0.603010 6_1:+8620944 Msa0872980:CDS
TCCAGCGCATACACTTTCAG+TGG 0.605952 6_1:-8620802 None:intergenic
ATCAATGCATTGTTGAAACT+AGG 0.608793 6_1:+8619159 Msa0872980:CDS
AAACGCTTGCTCAAATCAAG+AGG 0.611360 6_1:+8619240 Msa0872980:CDS
TTAACTCCAATTGATGGTGA+TGG 0.612841 6_1:+8619318 Msa0872980:CDS
AAATTATATAAAGCTTGCCA+TGG 0.613127 6_1:-8621282 None:intergenic
ACATAATAATTACCTTTAGG+TGG 0.616969 6_1:-8619609 None:intergenic
TTGATAGACAAAGAGCGTGT+AGG 0.621576 6_1:-8619356 None:intergenic
GAAACTAAGCAAGTAACTGG+AGG 0.624984 6_1:-8619453 None:intergenic
AAACTAAGCAAGTAACTGGA+GGG 0.625013 6_1:-8619452 None:intergenic
TCTTGTTATTGGTGGCTCAG+AGG 0.628258 6_1:+8620653 Msa0872980:CDS
TGATACCAATGTAAAGAGAG+AGG 0.628645 6_1:+8620911 Msa0872980:CDS
GAGGAGGACACAAGAGTCGG+TGG 0.632394 6_1:+8621020 Msa0872980:CDS
TTCAAAAGTATTGATAACAA+TGG 0.634406 6_1:-8620340 None:intergenic
GGTGGATTCTTGACTCATTG+CGG 0.635174 6_1:+8620768 Msa0872980:CDS
AAATTGTTAGAGTTTGCTTG+GGG 0.637062 6_1:+8620585 Msa0872980:CDS
AAAGTCAGTGAAACCATCAA+AGG 0.646878 6_1:-8619271 None:intergenic
GCAGAGGAGGACACAAGAGT+CGG 0.647185 6_1:+8621017 Msa0872980:CDS
ATAGAGGCCTAATAGCAAGT+TGG 0.652566 6_1:+8620709 Msa0872980:CDS
GAAGTAACATGCACTACATG+GGG 0.669605 6_1:-8619541 None:intergenic
AGAATCCACCGATTGAAGGG+TGG 0.673563 6_1:-8620755 None:intergenic
TACCAATGTAAAGAGAGAGG+AGG 0.690671 6_1:+8620914 Msa0872980:CDS
AATGGAGTTAACACTGCATG+TGG 0.703943 6_1:-8619120 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTCATAAATATAATTTTGT+AGG + chr6_1:8618998-8619017 Msa0872980:five_prime_UTR 10.0%
!! TATATGTAAAATATATATCA+AGG - chr6_1:8620119-8620138 None:intergenic 10.0%
!!! ATTCATAAATATAATTTTGT+AGG + chr6_1:8618998-8619017 Msa0872980:five_prime_UTR 10.0%
!! TATATGTAAAATATATATCA+AGG - chr6_1:8620119-8620138 None:intergenic 10.0%
!! AATAGTAAGAGATATTTATA+GGG + chr6_1:8619817-8619836 Msa0872980:intron 15.0%
!!! TATCAAGGTTTTTTAAAAAA+AGG + chr6_1:8619940-8619959 Msa0872980:intron 15.0%
!!! CTTTTATATTTTATCACATT+AGG - chr6_1:8620288-8620307 None:intergenic 15.0%
!! GATTTAAAAAAGATGAAAAT+GGG - chr6_1:8620425-8620444 None:intergenic 15.0%
!! TGATTTAAAAAAGATGAAAA+TGG - chr6_1:8620426-8620445 None:intergenic 15.0%
!! GTTATTACCAAAAATAAAAA+AGG - chr6_1:8621261-8621280 None:intergenic 15.0%
!!! ATAAGTTCAATTGTTTTAAA+CGG + chr6_1:8621367-8621386 Msa0872980:three_prime_UTR 15.0%
!! AATAGTAAGAGATATTTATA+GGG + chr6_1:8619817-8619836 Msa0872980:intron 15.0%
!!! TATCAAGGTTTTTTAAAAAA+AGG + chr6_1:8619940-8619959 Msa0872980:intron 15.0%
!!! CTTTTATATTTTATCACATT+AGG - chr6_1:8620288-8620307 None:intergenic 15.0%
!! GATTTAAAAAAGATGAAAAT+GGG - chr6_1:8620425-8620444 None:intergenic 15.0%
!! TGATTTAAAAAAGATGAAAA+TGG - chr6_1:8620426-8620445 None:intergenic 15.0%
!! GTTATTACCAAAAATAAAAA+AGG - chr6_1:8621261-8621280 None:intergenic 15.0%
!! TTTGCTTTAATAGAAAGATA+AGG - chr6_1:8619034-8619053 None:intergenic 20.0%
!! ACTTATACTAACTTTAACAT+TGG + chr6_1:8619055-8619074 Msa0872980:five_prime_UTR 20.0%
!! ATTTCTAAATTGTTTCAGAA+TGG + chr6_1:8619579-8619598 Msa0872980:CDS 20.0%
!! CAATAGTAAGAGATATTTAT+AGG + chr6_1:8619816-8619835 Msa0872980:intron 20.0%
!! ATAAACTATAGTTAGTTGAT+AGG - chr6_1:8619897-8619916 None:intergenic 20.0%
!! TTATCTAACAAATGGATATT+TGG + chr6_1:8620185-8620204 Msa0872980:CDS 20.0%
!!! TTTGAAAAACTTTAGTTTGA+AGG + chr6_1:8620233-8620252 Msa0872980:CDS 20.0%
!!! TCTTTTAACCTTATTAAATC+AGG - chr6_1:8620264-8620283 None:intergenic 20.0%
!!! TTCAAAAGTATTGATAACAA+TGG - chr6_1:8620343-8620362 None:intergenic 20.0%
!!! AAGCTTTATATAATTTTCCA+AGG + chr6_1:8621289-8621308 Msa0872980:three_prime_UTR 20.0%
!! TTTGCTTTAATAGAAAGATA+AGG - chr6_1:8619034-8619053 None:intergenic 20.0%
!! ACTTATACTAACTTTAACAT+TGG + chr6_1:8619055-8619074 Msa0872980:five_prime_UTR 20.0%
!! ATTTCTAAATTGTTTCAGAA+TGG + chr6_1:8619579-8619598 Msa0872980:CDS 20.0%
!! CAATAGTAAGAGATATTTAT+AGG + chr6_1:8619816-8619835 Msa0872980:intron 20.0%
!! ATAAACTATAGTTAGTTGAT+AGG - chr6_1:8619897-8619916 None:intergenic 20.0%
!! TTATCTAACAAATGGATATT+TGG + chr6_1:8620185-8620204 Msa0872980:CDS 20.0%
!!! TTTGAAAAACTTTAGTTTGA+AGG + chr6_1:8620233-8620252 Msa0872980:CDS 20.0%
!!! TCTTTTAACCTTATTAAATC+AGG - chr6_1:8620264-8620283 None:intergenic 20.0%
!!! TTCAAAAGTATTGATAACAA+TGG - chr6_1:8620343-8620362 None:intergenic 20.0%
!!! AAGCTTTATATAATTTTCCA+AGG + chr6_1:8621289-8621308 Msa0872980:three_prime_UTR 20.0%
!! ATAATTTTGTAGGTGTATAC+TGG + chr6_1:8619008-8619027 Msa0872980:five_prime_UTR 25.0%
! TAAGTTTAGCAAGAAATTCA+CGG - chr6_1:8619407-8619426 None:intergenic 25.0%
! TAGAAATGTGAAAATTTGAG+AGG - chr6_1:8619566-8619585 None:intergenic 25.0%
! ACATAATAATTACCTTTAGG+TGG - chr6_1:8619612-8619631 None:intergenic 25.0%
! GGAACATAATAATTACCTTT+AGG - chr6_1:8619615-8619634 None:intergenic 25.0%
! TGGTAATTGCATTAAATTTG+AGG + chr6_1:8620004-8620023 Msa0872980:intron 25.0%
! GATATTTGCAATAATGATTG+TGG - chr6_1:8620088-8620107 None:intergenic 25.0%
!!! AAACTAAAGTTTTTCAAACC+TGG - chr6_1:8620231-8620250 None:intergenic 25.0%
! CATCTTTAGATTCTAATCTT+TGG + chr6_1:8620466-8620485 Msa0872980:CDS 25.0%
! AAGATACTAAATGTCTTGAA+TGG + chr6_1:8620493-8620512 Msa0872980:CDS 25.0%
!!! TTTACATAAACAACGGATTT+TGG - chr6_1:8620534-8620553 None:intergenic 25.0%
!! TCCGTTGTTTATGTAAATTT+TGG + chr6_1:8620537-8620556 Msa0872980:CDS 25.0%
! GCCAAAATTTACATAAACAA+CGG - chr6_1:8620541-8620560 None:intergenic 25.0%
!!! AACCTTTTTTGTGGATTATT+AGG + chr6_1:8620625-8620644 Msa0872980:CDS 25.0%
! TTGAAAGAAATTTCAGATAG+AGG + chr6_1:8620693-8620712 Msa0872980:CDS 25.0%
! TAGAATTATTTGCGAAGAAT+GGG + chr6_1:8620872-8620891 Msa0872980:CDS 25.0%
! GAAACTTATCAATGAATTGA+TGG + chr6_1:8620941-8620960 Msa0872980:CDS 25.0%
! AATGCCTAGTAAAAAATACA+AGG - chr6_1:8621210-8621229 None:intergenic 25.0%
!!! TATTTTTGGTAATAACACCA+TGG + chr6_1:8621265-8621284 Msa0872980:three_prime_UTR 25.0%
! AAATTATATAAAGCTTGCCA+TGG - chr6_1:8621285-8621304 None:intergenic 25.0%
! CCATTCATAACACAAAATAA+AGG - chr6_1:8621329-8621348 None:intergenic 25.0%
!!! CCTTTATTTTGTGTTATGAA+TGG + chr6_1:8621326-8621345 Msa0872980:three_prime_UTR 25.0%
!! ATAATTTTGTAGGTGTATAC+TGG + chr6_1:8619008-8619027 Msa0872980:five_prime_UTR 25.0%
! TAAGTTTAGCAAGAAATTCA+CGG - chr6_1:8619407-8619426 None:intergenic 25.0%
! TAGAAATGTGAAAATTTGAG+AGG - chr6_1:8619566-8619585 None:intergenic 25.0%
! ACATAATAATTACCTTTAGG+TGG - chr6_1:8619612-8619631 None:intergenic 25.0%
! GGAACATAATAATTACCTTT+AGG - chr6_1:8619615-8619634 None:intergenic 25.0%
! TGGTAATTGCATTAAATTTG+AGG + chr6_1:8620004-8620023 Msa0872980:intron 25.0%
! GATATTTGCAATAATGATTG+TGG - chr6_1:8620088-8620107 None:intergenic 25.0%
!!! AAACTAAAGTTTTTCAAACC+TGG - chr6_1:8620231-8620250 None:intergenic 25.0%
! CATCTTTAGATTCTAATCTT+TGG + chr6_1:8620466-8620485 Msa0872980:CDS 25.0%
! AAGATACTAAATGTCTTGAA+TGG + chr6_1:8620493-8620512 Msa0872980:CDS 25.0%
!!! TTTACATAAACAACGGATTT+TGG - chr6_1:8620534-8620553 None:intergenic 25.0%
!! TCCGTTGTTTATGTAAATTT+TGG + chr6_1:8620537-8620556 Msa0872980:CDS 25.0%
! GCCAAAATTTACATAAACAA+CGG - chr6_1:8620541-8620560 None:intergenic 25.0%
!!! AACCTTTTTTGTGGATTATT+AGG + chr6_1:8620625-8620644 Msa0872980:CDS 25.0%
! TTGAAAGAAATTTCAGATAG+AGG + chr6_1:8620693-8620712 Msa0872980:CDS 25.0%
! TAGAATTATTTGCGAAGAAT+GGG + chr6_1:8620872-8620891 Msa0872980:CDS 25.0%
! GAAACTTATCAATGAATTGA+TGG + chr6_1:8620941-8620960 Msa0872980:CDS 25.0%
! AATGCCTAGTAAAAAATACA+AGG - chr6_1:8621210-8621229 None:intergenic 25.0%
!!! TATTTTTGGTAATAACACCA+TGG + chr6_1:8621265-8621284 Msa0872980:three_prime_UTR 25.0%
! AAATTATATAAAGCTTGCCA+TGG - chr6_1:8621285-8621304 None:intergenic 25.0%
! CCATTCATAACACAAAATAA+AGG - chr6_1:8621329-8621348 None:intergenic 25.0%
!!! CCTTTATTTTGTGTTATGAA+TGG + chr6_1:8621326-8621345 Msa0872980:three_prime_UTR 25.0%
! GTTTCAACAATGCATTGATA+TGG - chr6_1:8619158-8619177 None:intergenic 30.0%
ATCAATGCATTGTTGAAACT+AGG + chr6_1:8619159-8619178 Msa0872980:CDS 30.0%
!! ATTATATTCGGTGTTGACAA+AGG - chr6_1:8619217-8619236 None:intergenic 30.0%
CAAGCGTTTGTGATTATATT+CGG - chr6_1:8619229-8619248 None:intergenic 30.0%
ATGGGGAAAAGAGAATAATT+GGG - chr6_1:8619527-8619546 None:intergenic 30.0%
AAAAACAACATAGCTCTCTT+AGG - chr6_1:8619647-8619666 None:intergenic 30.0%
TGTATGTGTGTTAGTAATCA+TGG + chr6_1:8619672-8619691 Msa0872980:intron 30.0%
TCACTATGATCTTTATCCTT+GGG - chr6_1:8619701-8619720 None:intergenic 30.0%
ATCACTATGATCTTTATCCT+TGG - chr6_1:8619702-8619721 None:intergenic 30.0%
!! GTTAGTTGATAGGTAAACTA+TGG - chr6_1:8619887-8619906 None:intergenic 30.0%
CTCTAATAATGTGTGTATCA+AGG + chr6_1:8619925-8619944 Msa0872980:intron 30.0%
AAAAAGGTTTGTGACCAATA+CGG + chr6_1:8619956-8619975 Msa0872980:intron 30.0%
GATGAGAGTTATCTAACAAA+TGG + chr6_1:8620177-8620196 Msa0872980:intron 30.0%
TATTTGGACACTAAAGTTGA+CGG + chr6_1:8620201-8620220 Msa0872980:CDS 30.0%
AGGATCTTCCTGATTTAATA+AGG + chr6_1:8620253-8620272 Msa0872980:CDS 30.0%
! AAAGATGTCAAGTGATTTTG+TGG - chr6_1:8620453-8620472 None:intergenic 30.0%
! AGAAATTGTTAGAGTTTGCT+TGG + chr6_1:8620583-8620602 Msa0872980:CDS 30.0%
! GAAATTGTTAGAGTTTGCTT+GGG + chr6_1:8620584-8620603 Msa0872980:CDS 30.0%
! AAATTGTTAGAGTTTGCTTG+GGG + chr6_1:8620585-8620604 Msa0872980:CDS 30.0%
CAAATAATTCTACTGCTAAG+TGG - chr6_1:8620864-8620883 None:intergenic 30.0%
GTAGAATTATTTGCGAAGAA+TGG + chr6_1:8620871-8620890 Msa0872980:CDS 30.0%
ACTTATCAATGAATTGATGG+TGG + chr6_1:8620944-8620963 Msa0872980:CDS 30.0%
! CTTATCAATGAATTGATGGT+GGG + chr6_1:8620945-8620964 Msa0872980:CDS 30.0%
!!! CAGACCTTGTATTTTTTACT+AGG + chr6_1:8621203-8621222 Msa0872980:three_prime_UTR 30.0%
! TTACTAGGCATTGTTTCAAA+AGG + chr6_1:8621218-8621237 Msa0872980:three_prime_UTR 30.0%
! TACTAGGCATTGTTTCAAAA+GGG + chr6_1:8621219-8621238 Msa0872980:three_prime_UTR 30.0%
!!! GTGCGAACCTTTTTTATTTT+TGG + chr6_1:8621251-8621270 Msa0872980:three_prime_UTR 30.0%
AGGATGCTTAATAAATTCCT+TGG - chr6_1:8621309-8621328 None:intergenic 30.0%
! GTTTCAACAATGCATTGATA+TGG - chr6_1:8619158-8619177 None:intergenic 30.0%
ATCAATGCATTGTTGAAACT+AGG + chr6_1:8619159-8619178 Msa0872980:CDS 30.0%
!! ATTATATTCGGTGTTGACAA+AGG - chr6_1:8619217-8619236 None:intergenic 30.0%
CAAGCGTTTGTGATTATATT+CGG - chr6_1:8619229-8619248 None:intergenic 30.0%
ATGGGGAAAAGAGAATAATT+GGG - chr6_1:8619527-8619546 None:intergenic 30.0%
AAAAACAACATAGCTCTCTT+AGG - chr6_1:8619647-8619666 None:intergenic 30.0%
TGTATGTGTGTTAGTAATCA+TGG + chr6_1:8619672-8619691 Msa0872980:intron 30.0%
TCACTATGATCTTTATCCTT+GGG - chr6_1:8619701-8619720 None:intergenic 30.0%
ATCACTATGATCTTTATCCT+TGG - chr6_1:8619702-8619721 None:intergenic 30.0%
!! GTTAGTTGATAGGTAAACTA+TGG - chr6_1:8619887-8619906 None:intergenic 30.0%
CTCTAATAATGTGTGTATCA+AGG + chr6_1:8619925-8619944 Msa0872980:intron 30.0%
AAAAAGGTTTGTGACCAATA+CGG + chr6_1:8619956-8619975 Msa0872980:intron 30.0%
GATGAGAGTTATCTAACAAA+TGG + chr6_1:8620177-8620196 Msa0872980:intron 30.0%
TATTTGGACACTAAAGTTGA+CGG + chr6_1:8620201-8620220 Msa0872980:CDS 30.0%
AGGATCTTCCTGATTTAATA+AGG + chr6_1:8620253-8620272 Msa0872980:CDS 30.0%
! AAAGATGTCAAGTGATTTTG+TGG - chr6_1:8620453-8620472 None:intergenic 30.0%
! AGAAATTGTTAGAGTTTGCT+TGG + chr6_1:8620583-8620602 Msa0872980:CDS 30.0%
! GAAATTGTTAGAGTTTGCTT+GGG + chr6_1:8620584-8620603 Msa0872980:CDS 30.0%
! AAATTGTTAGAGTTTGCTTG+GGG + chr6_1:8620585-8620604 Msa0872980:CDS 30.0%
CAAATAATTCTACTGCTAAG+TGG - chr6_1:8620864-8620883 None:intergenic 30.0%
GTAGAATTATTTGCGAAGAA+TGG + chr6_1:8620871-8620890 Msa0872980:CDS 30.0%
ACTTATCAATGAATTGATGG+TGG + chr6_1:8620944-8620963 Msa0872980:CDS 30.0%
! CTTATCAATGAATTGATGGT+GGG + chr6_1:8620945-8620964 Msa0872980:CDS 30.0%
!!! CAGACCTTGTATTTTTTACT+AGG + chr6_1:8621203-8621222 Msa0872980:three_prime_UTR 30.0%
! TTACTAGGCATTGTTTCAAA+AGG + chr6_1:8621218-8621237 Msa0872980:three_prime_UTR 30.0%
! TACTAGGCATTGTTTCAAAA+GGG + chr6_1:8621219-8621238 Msa0872980:three_prime_UTR 30.0%
!!! GTGCGAACCTTTTTTATTTT+TGG + chr6_1:8621251-8621270 Msa0872980:three_prime_UTR 30.0%
AGGATGCTTAATAAATTCCT+TGG - chr6_1:8621309-8621328 None:intergenic 30.0%
TTAACTCCATTTCCAGTTCA+AGG + chr6_1:8619132-8619151 Msa0872980:CDS 35.0%
GGAAAATTACTTCACCTTAG+AGG + chr6_1:8619180-8619199 Msa0872980:CDS 35.0%
AAAGTCAGTGAAACCATCAA+AGG - chr6_1:8619274-8619293 None:intergenic 35.0%
TCAATTGGAGTTAAACCATC+TGG - chr6_1:8619312-8619331 None:intergenic 35.0%
GATGGTTTAACTCCAATTGA+TGG + chr6_1:8619312-8619331 Msa0872980:CDS 35.0%
!! TTAACTCCAATTGATGGTGA+TGG + chr6_1:8619318-8619337 Msa0872980:CDS 35.0%
CAAGAAATTCACGGAAGAAT+TGG - chr6_1:8619398-8619417 None:intergenic 35.0%
AAACTAAGCAAGTAACTGGA+GGG - chr6_1:8619455-8619474 None:intergenic 35.0%
TCAGAAACTAAGCAAGTAAC+TGG - chr6_1:8619459-8619478 None:intergenic 35.0%
CATGGGGAAAAGAGAATAAT+TGG - chr6_1:8619528-8619547 None:intergenic 35.0%
AGCTCTCTTAGGAAGAAAAA+AGG - chr6_1:8619636-8619655 None:intergenic 35.0%
TTAGTAATCATGGAATCCCA+AGG + chr6_1:8619682-8619701 Msa0872980:intron 35.0%
!! AAACTTAAGAGTGCTCATGT+GGG + chr6_1:8619734-8619753 Msa0872980:intron 35.0%
! GTTGATAGGTAAACTATGGT+TGG - chr6_1:8619883-8619902 None:intergenic 35.0%
AAAAGGTTTGTGACCAATAC+GGG + chr6_1:8619957-8619976 Msa0872980:intron 35.0%
CATATAATCGCAACCAAATG+CGG - chr6_1:8620039-8620058 None:intergenic 35.0%
GTTGCGATTATATGCAATGA+CGG + chr6_1:8620045-8620064 Msa0872980:intron 35.0%
ATTTGGACACTAAAGTTGAC+GGG + chr6_1:8620202-8620221 Msa0872980:CDS 35.0%
!! AGTATTGATAACAATGGCAG+AGG - chr6_1:8620337-8620356 None:intergenic 35.0%
TTCCCTTCTCTATACACAAT+TGG + chr6_1:8620399-8620418 Msa0872980:CDS 35.0%
! CAAAAAAGGTTTCTTGCTGT+TGG - chr6_1:8620616-8620635 None:intergenic 35.0%
!!! ACAGCAAGAAACCTTTTTTG+TGG + chr6_1:8620616-8620635 Msa0872980:CDS 35.0%
GGCCTAATAATCCACAAAAA+AGG - chr6_1:8620630-8620649 None:intergenic 35.0%
! ATTAGGCCTGATCTTGTTAT+TGG + chr6_1:8620642-8620661 Msa0872980:CDS 35.0%
TGGTTCAAAACTTTCTCTTG+TGG - chr6_1:8620738-8620757 None:intergenic 35.0%
AAAAATGGCCAACACAACAT+TGG - chr6_1:8620831-8620850 None:intergenic 35.0%
TAATTCTACTGCTAAGTGGT+TGG - chr6_1:8620860-8620879 None:intergenic 35.0%
TGATACCAATGTAAAGAGAG+AGG + chr6_1:8620911-8620930 Msa0872980:CDS 35.0%
TGGTAGTTCATACATGAACT+TGG + chr6_1:8621040-8621059 Msa0872980:CDS 35.0%
GAACTTGGACAAAGTGATTA+AGG + chr6_1:8621055-8621074 Msa0872980:CDS 35.0%
TTAACTCCATTTCCAGTTCA+AGG + chr6_1:8619132-8619151 Msa0872980:CDS 35.0%
GGAAAATTACTTCACCTTAG+AGG + chr6_1:8619180-8619199 Msa0872980:CDS 35.0%
AAAGTCAGTGAAACCATCAA+AGG - chr6_1:8619274-8619293 None:intergenic 35.0%
TCAATTGGAGTTAAACCATC+TGG - chr6_1:8619312-8619331 None:intergenic 35.0%
GATGGTTTAACTCCAATTGA+TGG + chr6_1:8619312-8619331 Msa0872980:CDS 35.0%
!! TTAACTCCAATTGATGGTGA+TGG + chr6_1:8619318-8619337 Msa0872980:CDS 35.0%
CAAGAAATTCACGGAAGAAT+TGG - chr6_1:8619398-8619417 None:intergenic 35.0%
AAACTAAGCAAGTAACTGGA+GGG - chr6_1:8619455-8619474 None:intergenic 35.0%
TCAGAAACTAAGCAAGTAAC+TGG - chr6_1:8619459-8619478 None:intergenic 35.0%
CATGGGGAAAAGAGAATAAT+TGG - chr6_1:8619528-8619547 None:intergenic 35.0%
AGCTCTCTTAGGAAGAAAAA+AGG - chr6_1:8619636-8619655 None:intergenic 35.0%
TTAGTAATCATGGAATCCCA+AGG + chr6_1:8619682-8619701 Msa0872980:intron 35.0%
!! AAACTTAAGAGTGCTCATGT+GGG + chr6_1:8619734-8619753 Msa0872980:intron 35.0%
! GTTGATAGGTAAACTATGGT+TGG - chr6_1:8619883-8619902 None:intergenic 35.0%
AAAAGGTTTGTGACCAATAC+GGG + chr6_1:8619957-8619976 Msa0872980:intron 35.0%
CATATAATCGCAACCAAATG+CGG - chr6_1:8620039-8620058 None:intergenic 35.0%
GTTGCGATTATATGCAATGA+CGG + chr6_1:8620045-8620064 Msa0872980:intron 35.0%
ATTTGGACACTAAAGTTGAC+GGG + chr6_1:8620202-8620221 Msa0872980:CDS 35.0%
!! AGTATTGATAACAATGGCAG+AGG - chr6_1:8620337-8620356 None:intergenic 35.0%
TTCCCTTCTCTATACACAAT+TGG + chr6_1:8620399-8620418 Msa0872980:CDS 35.0%
! CAAAAAAGGTTTCTTGCTGT+TGG - chr6_1:8620616-8620635 None:intergenic 35.0%
!!! ACAGCAAGAAACCTTTTTTG+TGG + chr6_1:8620616-8620635 Msa0872980:CDS 35.0%
GGCCTAATAATCCACAAAAA+AGG - chr6_1:8620630-8620649 None:intergenic 35.0%
! ATTAGGCCTGATCTTGTTAT+TGG + chr6_1:8620642-8620661 Msa0872980:CDS 35.0%
TGGTTCAAAACTTTCTCTTG+TGG - chr6_1:8620738-8620757 None:intergenic 35.0%
AAAAATGGCCAACACAACAT+TGG - chr6_1:8620831-8620850 None:intergenic 35.0%
TAATTCTACTGCTAAGTGGT+TGG - chr6_1:8620860-8620879 None:intergenic 35.0%
TGATACCAATGTAAAGAGAG+AGG + chr6_1:8620911-8620930 Msa0872980:CDS 35.0%
TGGTAGTTCATACATGAACT+TGG + chr6_1:8621040-8621059 Msa0872980:CDS 35.0%
GAACTTGGACAAAGTGATTA+AGG + chr6_1:8621055-8621074 Msa0872980:CDS 35.0%
AATGGAGTTAACACTGCATG+TGG - chr6_1:8619123-8619142 None:intergenic 40.0%
! ATATGGCCTTGAACTGGAAA+TGG - chr6_1:8619141-8619160 None:intergenic 40.0%
AGGTTATGTGAAAGCCTCTA+AGG - chr6_1:8619197-8619216 None:intergenic 40.0%
AAACGCTTGCTCAAATCAAG+AGG + chr6_1:8619240-8619259 Msa0872980:CDS 40.0%
AGAGGTGAAAATGCCTTTGA+TGG + chr6_1:8619258-8619277 Msa0872980:CDS 40.0%
!! ACCTTTGAGACTATTCCAGA+TGG + chr6_1:8619294-8619313 Msa0872980:CDS 40.0%
! ACCATCTGGAATAGTCTCAA+AGG - chr6_1:8619298-8619317 None:intergenic 40.0%
ACATTGCCATCACCATCAAT+TGG - chr6_1:8619327-8619346 None:intergenic 40.0%
! TTGATAGACAAAGAGCGTGT+AGG - chr6_1:8619359-8619378 None:intergenic 40.0%
GAAACTAAGCAAGTAACTGG+AGG - chr6_1:8619456-8619475 None:intergenic 40.0%
TCAGCAGCATCTACTGTAAA+TGG - chr6_1:8619492-8619511 None:intergenic 40.0%
GAAGTAACATGCACTACATG+GGG - chr6_1:8619544-8619563 None:intergenic 40.0%
GGAAGTAACATGCACTACAT+GGG - chr6_1:8619545-8619564 None:intergenic 40.0%
AGGAAGTAACATGCACTACA+TGG - chr6_1:8619546-8619565 None:intergenic 40.0%
!! CAAACTTAAGAGTGCTCATG+TGG + chr6_1:8619733-8619752 Msa0872980:intron 40.0%
ATAGGTAAACTATGGTTGGC+TGG - chr6_1:8619879-8619898 None:intergenic 40.0%
TTACCAAGACATCACAACGT+TGG - chr6_1:8619990-8620009 None:intergenic 40.0%
GGCCAATTGTGTATAGAGAA+GGG - chr6_1:8620404-8620423 None:intergenic 40.0%
ATAGAGGCCTAATAGCAAGT+TGG + chr6_1:8620709-8620728 Msa0872980:CDS 40.0%
!! GTTTTGAACCACCCTTCAAT+CGG + chr6_1:8620747-8620766 Msa0872980:CDS 40.0%
! TCAAGAATCCACCGATTGAA+GGG - chr6_1:8620761-8620780 None:intergenic 40.0%
! AGTGGTTGGTCAGCAAAAAA+TGG - chr6_1:8620846-8620865 None:intergenic 40.0%
ATTTGCGAAGAATGGGAGAT+TGG + chr6_1:8620879-8620898 Msa0872980:CDS 40.0%
TTTGCGAAGAATGGGAGATT+GGG + chr6_1:8620880-8620899 Msa0872980:CDS 40.0%
TACCAATGTAAAGAGAGAGG+AGG + chr6_1:8620914-8620933 Msa0872980:CDS 40.0%
TACCTCCTCTCTCTTTACAT+TGG - chr6_1:8620919-8620938 None:intergenic 40.0%
GAGAGAAAGGAAAGAAGATG+AGG + chr6_1:8620967-8620986 Msa0872980:CDS 40.0%
AGGAAAGAAGATGAGGCAAA+AGG + chr6_1:8620974-8620993 Msa0872980:CDS 40.0%
AATGGAGTTAACACTGCATG+TGG - chr6_1:8619123-8619142 None:intergenic 40.0%
! ATATGGCCTTGAACTGGAAA+TGG - chr6_1:8619141-8619160 None:intergenic 40.0%
AGGTTATGTGAAAGCCTCTA+AGG - chr6_1:8619197-8619216 None:intergenic 40.0%
AAACGCTTGCTCAAATCAAG+AGG + chr6_1:8619240-8619259 Msa0872980:CDS 40.0%
AGAGGTGAAAATGCCTTTGA+TGG + chr6_1:8619258-8619277 Msa0872980:CDS 40.0%
!! ACCTTTGAGACTATTCCAGA+TGG + chr6_1:8619294-8619313 Msa0872980:CDS 40.0%
! ACCATCTGGAATAGTCTCAA+AGG - chr6_1:8619298-8619317 None:intergenic 40.0%
ACATTGCCATCACCATCAAT+TGG - chr6_1:8619327-8619346 None:intergenic 40.0%
! TTGATAGACAAAGAGCGTGT+AGG - chr6_1:8619359-8619378 None:intergenic 40.0%
GAAACTAAGCAAGTAACTGG+AGG - chr6_1:8619456-8619475 None:intergenic 40.0%
TCAGCAGCATCTACTGTAAA+TGG - chr6_1:8619492-8619511 None:intergenic 40.0%
GAAGTAACATGCACTACATG+GGG - chr6_1:8619544-8619563 None:intergenic 40.0%
GGAAGTAACATGCACTACAT+GGG - chr6_1:8619545-8619564 None:intergenic 40.0%
AGGAAGTAACATGCACTACA+TGG - chr6_1:8619546-8619565 None:intergenic 40.0%
!! CAAACTTAAGAGTGCTCATG+TGG + chr6_1:8619733-8619752 Msa0872980:intron 40.0%
ATAGGTAAACTATGGTTGGC+TGG - chr6_1:8619879-8619898 None:intergenic 40.0%
TTACCAAGACATCACAACGT+TGG - chr6_1:8619990-8620009 None:intergenic 40.0%
GGCCAATTGTGTATAGAGAA+GGG - chr6_1:8620404-8620423 None:intergenic 40.0%
ATAGAGGCCTAATAGCAAGT+TGG + chr6_1:8620709-8620728 Msa0872980:CDS 40.0%
!! GTTTTGAACCACCCTTCAAT+CGG + chr6_1:8620747-8620766 Msa0872980:CDS 40.0%
! TCAAGAATCCACCGATTGAA+GGG - chr6_1:8620761-8620780 None:intergenic 40.0%
! AGTGGTTGGTCAGCAAAAAA+TGG - chr6_1:8620846-8620865 None:intergenic 40.0%
ATTTGCGAAGAATGGGAGAT+TGG + chr6_1:8620879-8620898 Msa0872980:CDS 40.0%
TTTGCGAAGAATGGGAGATT+GGG + chr6_1:8620880-8620899 Msa0872980:CDS 40.0%
TACCAATGTAAAGAGAGAGG+AGG + chr6_1:8620914-8620933 Msa0872980:CDS 40.0%
TACCTCCTCTCTCTTTACAT+TGG - chr6_1:8620919-8620938 None:intergenic 40.0%
GAGAGAAAGGAAAGAAGATG+AGG + chr6_1:8620967-8620986 Msa0872980:CDS 40.0%
AGGAAAGAAGATGAGGCAAA+AGG + chr6_1:8620974-8620993 Msa0872980:CDS 40.0%
! GCATTGATATGGCCTTGAAC+TGG - chr6_1:8619147-8619166 None:intergenic 45.0%
CTTAATGACTCTGCTACTGC+TGG + chr6_1:8619423-8619442 Msa0872980:CDS 45.0%
AATGGTGTGCTACCACCTAA+AGG + chr6_1:8619597-8619616 Msa0872980:CDS 45.0%
! GTAAACTATGGTTGGCTGGT+TGG - chr6_1:8619875-8619894 None:intergenic 45.0%
! GACATCACAACGTTGGTGTT+CGG - chr6_1:8619983-8620002 None:intergenic 45.0%
ACACCAACGTTGTGATGTCT+TGG + chr6_1:8619984-8620003 Msa0872980:intron 45.0%
ACTAAAGTTGACGGGATTCC+AGG + chr6_1:8620210-8620229 Msa0872980:CDS 45.0%
GGGCCAATTGTGTATAGAGA+AGG - chr6_1:8620405-8620424 None:intergenic 45.0%
! GTTAGAGTTTGCTTGGGGTT+TGG + chr6_1:8620590-8620609 Msa0872980:CDS 45.0%
!! AGGCCTGATCTTGTTATTGG+TGG + chr6_1:8620645-8620664 Msa0872980:CDS 45.0%
GAGCCACCAATAACAAGATC+AGG - chr6_1:8620651-8620670 None:intergenic 45.0%
!! TCTTGTTATTGGTGGCTCAG+AGG + chr6_1:8620653-8620672 Msa0872980:CDS 45.0%
!! GTGGACACCAACTTGCTATT+AGG - chr6_1:8620719-8620738 None:intergenic 45.0%
! GTCAAGAATCCACCGATTGA+AGG - chr6_1:8620762-8620781 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+CGG + chr6_1:8620768-8620787 Msa0872980:CDS 45.0%
GATTCTTGACTCATTGCGGA+TGG + chr6_1:8620772-8620791 Msa0872980:CDS 45.0%
!! GAATTGATGGTGGGAGAGAA+AGG + chr6_1:8620954-8620973 Msa0872980:CDS 45.0%
! GCATTGATATGGCCTTGAAC+TGG - chr6_1:8619147-8619166 None:intergenic 45.0%
CTTAATGACTCTGCTACTGC+TGG + chr6_1:8619423-8619442 Msa0872980:CDS 45.0%
AATGGTGTGCTACCACCTAA+AGG + chr6_1:8619597-8619616 Msa0872980:CDS 45.0%
! GTAAACTATGGTTGGCTGGT+TGG - chr6_1:8619875-8619894 None:intergenic 45.0%
! GACATCACAACGTTGGTGTT+CGG - chr6_1:8619983-8620002 None:intergenic 45.0%
ACACCAACGTTGTGATGTCT+TGG + chr6_1:8619984-8620003 Msa0872980:intron 45.0%
ACTAAAGTTGACGGGATTCC+AGG + chr6_1:8620210-8620229 Msa0872980:CDS 45.0%
GGGCCAATTGTGTATAGAGA+AGG - chr6_1:8620405-8620424 None:intergenic 45.0%
! GTTAGAGTTTGCTTGGGGTT+TGG + chr6_1:8620590-8620609 Msa0872980:CDS 45.0%
!! AGGCCTGATCTTGTTATTGG+TGG + chr6_1:8620645-8620664 Msa0872980:CDS 45.0%
GAGCCACCAATAACAAGATC+AGG - chr6_1:8620651-8620670 None:intergenic 45.0%
!! TCTTGTTATTGGTGGCTCAG+AGG + chr6_1:8620653-8620672 Msa0872980:CDS 45.0%
!! GTGGACACCAACTTGCTATT+AGG - chr6_1:8620719-8620738 None:intergenic 45.0%
! GTCAAGAATCCACCGATTGA+AGG - chr6_1:8620762-8620781 None:intergenic 45.0%
! GGTGGATTCTTGACTCATTG+CGG + chr6_1:8620768-8620787 Msa0872980:CDS 45.0%
GATTCTTGACTCATTGCGGA+TGG + chr6_1:8620772-8620791 Msa0872980:CDS 45.0%
!! GAATTGATGGTGGGAGAGAA+AGG + chr6_1:8620954-8620973 Msa0872980:CDS 45.0%
! CTATGGTTGGCTGGTTGGTT+AGG - chr6_1:8619870-8619889 None:intergenic 50.0%
GAGGTTGCATCAACCGCATT+TGG + chr6_1:8620023-8620042 Msa0872980:intron 50.0%
TTGAACCACCCTTCAATCGG+TGG + chr6_1:8620750-8620769 Msa0872980:CDS 50.0%
! AGAATCCACCGATTGAAGGG+TGG - chr6_1:8620758-8620777 None:intergenic 50.0%
! ACCACTGAAAGTGTATGCGC+TGG + chr6_1:8620801-8620820 Msa0872980:CDS 50.0%
TCCAGCGCATACACTTTCAG+TGG - chr6_1:8620805-8620824 None:intergenic 50.0%
! CTGGAGTGCCAATGTTGTGT+TGG + chr6_1:8620820-8620839 Msa0872980:CDS 50.0%
GAAGATGAGGCAAAAGGCCA+CGG + chr6_1:8620980-8620999 Msa0872980:CDS 50.0%
TGCCTTCTTCTTCAACTCCG+TGG - chr6_1:8621000-8621019 None:intergenic 50.0%
GGAGTTGAAGAAGAAGGCAG+AGG + chr6_1:8621001-8621020 Msa0872980:CDS 50.0%
GTTGAAGAAGAAGGCAGAGG+AGG + chr6_1:8621004-8621023 Msa0872980:CDS 50.0%
! CTATGGTTGGCTGGTTGGTT+AGG - chr6_1:8619870-8619889 None:intergenic 50.0%
GAGGTTGCATCAACCGCATT+TGG + chr6_1:8620023-8620042 Msa0872980:intron 50.0%
TTGAACCACCCTTCAATCGG+TGG + chr6_1:8620750-8620769 Msa0872980:CDS 50.0%
! AGAATCCACCGATTGAAGGG+TGG - chr6_1:8620758-8620777 None:intergenic 50.0%
! ACCACTGAAAGTGTATGCGC+TGG + chr6_1:8620801-8620820 Msa0872980:CDS 50.0%
TCCAGCGCATACACTTTCAG+TGG - chr6_1:8620805-8620824 None:intergenic 50.0%
! CTGGAGTGCCAATGTTGTGT+TGG + chr6_1:8620820-8620839 Msa0872980:CDS 50.0%
GAAGATGAGGCAAAAGGCCA+CGG + chr6_1:8620980-8620999 Msa0872980:CDS 50.0%
TGCCTTCTTCTTCAACTCCG+TGG - chr6_1:8621000-8621019 None:intergenic 50.0%
GGAGTTGAAGAAGAAGGCAG+AGG + chr6_1:8621001-8621020 Msa0872980:CDS 50.0%
GTTGAAGAAGAAGGCAGAGG+AGG + chr6_1:8621004-8621023 Msa0872980:CDS 50.0%
GGCCACGGAGTTGAAGAAGA+AGG + chr6_1:8620995-8621014 Msa0872980:CDS 55.0%
GCAGAGGAGGACACAAGAGT+CGG + chr6_1:8621017-8621036 Msa0872980:CDS 55.0%
GGCCACGGAGTTGAAGAAGA+AGG + chr6_1:8620995-8621014 Msa0872980:CDS 55.0%
GCAGAGGAGGACACAAGAGT+CGG + chr6_1:8621017-8621036 Msa0872980:CDS 55.0%
! CGTTGGTGTTCGGCCCGTAT+TGG - chr6_1:8619973-8619992 None:intergenic 60.0%
GAGGAGGACACAAGAGTCGG+TGG + chr6_1:8621020-8621039 Msa0872980:CDS 60.0%
! CGTTGGTGTTCGGCCCGTAT+TGG - chr6_1:8619973-8619992 None:intergenic 60.0%
GAGGAGGACACAAGAGTCGG+TGG + chr6_1:8621020-8621039 Msa0872980:CDS 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 8618993 8621387 8618993 ID=Msa0872980;Name=Msa0872980
chr6_1 mRNA 8618993 8621387 8618993 ID=Msa0872980-mRNA-1;Parent=Msa0872980;Name=Msa0872980-mRNA-1;_AED=0.02;_eAED=0.02;_QI=103|1|1|1|1|1|2|281|483
chr6_1 exon 8618993 8619618 8618993 ID=Msa0872980-mRNA-1:exon:2616;Parent=Msa0872980-mRNA-1
chr6_1 exon 8620178 8621387 8620178 ID=Msa0872980-mRNA-1:exon:2617;Parent=Msa0872980-mRNA-1
chr6_1 five_prime_UTR 8618993 8619095 8618993 ID=Msa0872980-mRNA-1:five_prime_utr;Parent=Msa0872980-mRNA-1
chr6_1 CDS 8619096 8619618 8619096 ID=Msa0872980-mRNA-1:cds;Parent=Msa0872980-mRNA-1
chr6_1 CDS 8620178 8621106 8620178 ID=Msa0872980-mRNA-1:cds;Parent=Msa0872980-mRNA-1
chr6_1 three_prime_UTR 8621107 8621387 8621107 ID=Msa0872980-mRNA-1:three_prime_utr;Parent=Msa0872980-mRNA-1
Gene Sequence

>Msa0872980

ATGAGTAACTTTGCAGAGAAAAAGCCACATGCAGTGTTAACTCCATTTCCAGTTCAAGGCCATATCAATGCATTGTTGAAACTAGGAAAATTACTTCACCTTAGAGGCTTTCACATAACCTTTGTCAACACCGAATATAATCACAAACGCTTGCTCAAATCAAGAGGTGAAAATGCCTTTGATGGTTTCACTGACTTTACCTTTGAGACTATTCCAGATGGTTTAACTCCAATTGATGGTGATGGCAATGTTAGTCAAGACCTACACGCTCTTTGTCTATCAATCATGAACGATTTTCACCAATTCTTCCGTGAATTTCTTGCTAAACTTAATGACTCTGCTACTGCTGGTCTTATCCCTCCAGTTACTTGCTTAGTTTCTGATTGCAACATGCCATTTACAGTAGATGCTGCTGAAGAACATGCACTCCCAATTATTCTCTTTTCCCCATGTAGTGCATGTTACTTCCTCTCAAATTTTCACATTTCTAAATTGTTTCAGAATGGTGTGCTACCACCTAAAGATGAGAGTTATCTAACAAATGGATATTTGGACACTAAAGTTGACGGGATTCCAGGTTTGAAAAACTTTAGTTTGAAGGATCTTCCTGATTTAATAAGGTTAAAAGATCCTAATGTGATAAAATATAAAAGTGAAGAGACAGATAAATGTCAAAGAGCCTCTGCCATTGTTATCAATACTTTTGAACTTGAGAGTGATGCTATCAATGCTCTTAGTTCAATATTCCCTTCTCTATACACAATTGGCCCATTTTCATCTTTTTTAAATCAAATTCCACAAAATCACTTGACATCTTTAGATTCTAATCTTTGGAAAGAAGATACTAAATGTCTTGAATGGCTTGAATCAAAAGAACCAAAATCCGTTGTTTATGTAAATTTTGGCAGCATTACAGTTATGTCTCAAGAGAAATTGTTAGAGTTTGCTTGGGGTTTGGCCAACAGCAAGAAACCTTTTTTGTGGATTATTAGGCCTGATCTTGTTATTGGTGGCTCAGAGGTGTTGTCATCTGATTTTTTGAAAGAAATTTCAGATAGAGGCCTAATAGCAAGTTGGTGTCCACAAGAGAAAGTTTTGAACCACCCTTCAATCGGTGGATTCTTGACTCATTGCGGATGGAACTCAACCACTGAAAGTGTATGCGCTGGAGTGCCAATGTTGTGTTGGCCATTTTTTGCTGACCAACCACTTAGCAGTAGAATTATTTGCGAAGAATGGGAGATTGGGATGAAAATTGATACCAATGTAAAGAGAGAGGAGGTAGAGAAACTTATCAATGAATTGATGGTGGGAGAGAAAGGAAAGAAGATGAGGCAAAAGGCCACGGAGTTGAAGAAGAAGGCAGAGGAGGACACAAGAGTCGGTGGTAGTTCATACATGAACTTGGACAAAGTGATTAAGGATGTCTTGCTTAAAAAAATATTAGATTAA
Protein sequence

>Msa0872980

MSNFAEKKPHAVLTPFPVQGHINALLKLGKLLHLRGFHITFVNTEYNHKRLLKSRGENAFDGFTDFTFETIPDGLTPIDGDGNVSQDLHALCLSIMNDFHQFFREFLAKLNDSATAGLIPPVTCLVSDCNMPFTVDAAEEHALPIILFSPCSACYFLSNFHISKLFQNGVLPPKDESYLTNGYLDTKVDGIPGLKNFSLKDLPDLIRLKDPNVIKYKSEETDKCQRASAIVINTFELESDAINALSSIFPSLYTIGPFSSFLNQIPQNHLTSLDSNLWKEDTKCLEWLESKEPKSVVYVNFGSITVMSQEKLLEFAWGLANSKKPFLWIIRPDLVIGGSEVLSSDFLKEISDRGLIASWCPQEKVLNHPSIGGFLTHCGWNSTTESVCAGVPMLCWPFFADQPLSSRIICEEWEIGMKIDTNVKREEVEKLINELMVGEKGKKMRQKATELKKKAEEDTRVGGSSYMNLDKVIKDVLLKKILD*