AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0875830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0875830 MtrunA17_Chr6g0456841 92.405 553 28 2 1 549 1 543 0.0 991
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0875830 AT5G38600.3 53.825 366 134 12 106 460 3 344 6.20e-114 345
Msa0875830 AT5G38600.2 53.533 368 136 12 106 462 14 357 1.27e-113 345
Msa0875830 AT5G38600.1 50.367 409 167 13 64 460 63 447 1.79e-113 347
Msa0875830 AT1G67210.2 51.807 332 138 5 75 400 44 359 8.05e-107 326
Msa0875830 AT1G67210.1 51.351 333 140 5 75 400 44 361 4.67e-105 322
Msa0875830 AT1G67210.3 53.788 264 107 3 75 338 44 292 1.19e-92 286

Find 191 sgRNAs with CRISPR-Local

Find 689 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGACTGCTATAGCCATTTC+TGG 0.203898 6_1:+12857699 Msa0875830:three_prime_UTR
AGAAAGAGAGAGGGAGAATT+TGG 0.215824 6_1:-12847845 None:intergenic
ACTCGTCAGCTCTTGGGCTT+GGG 0.266722 6_1:+12853336 Msa0875830:CDS
AACTCGTCAGCTCTTGGGCT+TGG 0.276725 6_1:+12853335 Msa0875830:CDS
GACAGAGACAGTTGTGGTTT+TGG 0.284287 6_1:+12849702 Msa0875830:CDS
TGAAGAGAATGGAATGAAAA+AGG 0.306111 6_1:-12857292 None:intergenic
TCACCGTTGGGACGAGATTC+TGG 0.314344 6_1:+12857340 Msa0875830:CDS
GAAGGATTTGGAAGTGGGTT+TGG 0.325887 6_1:+12849675 Msa0875830:CDS
CTCCAATCTGCCATTGAATT+AGG 0.326394 6_1:-12857229 None:intergenic
TCTTTAAATTACAGTCGTTC+TGG 0.329942 6_1:+12851862 Msa0875830:intron
AATCTTTCATCGGCCTTCTC+TGG 0.335501 6_1:-12857001 None:intergenic
GCAATGCCACAAACCTTGTT+AGG 0.340416 6_1:-12850371 None:intergenic
TGAACCTGTCAAGAAGGATT+TGG 0.346909 6_1:+12849663 Msa0875830:CDS
GATGAGGAGGACCAGCCTTC+TGG 0.355462 6_1:+12856857 Msa0875830:CDS
CAACAGAGATCATCGAGTTT+TGG 0.358171 6_1:+12857082 Msa0875830:CDS
AAACAGGGTTTGTTTAGAAA+TGG 0.358773 6_1:+12849477 Msa0875830:intron
CCCATCCTCTTGTTCTGCCA+TGG 0.367426 6_1:-12856903 None:intergenic
TAGTCGGAGGTGATGACTAA+TGG 0.377904 6_1:+12857474 Msa0875830:exon
TTCTAACAAGCCAATCATAT+TGG 0.383081 6_1:+12857616 Msa0875830:three_prime_UTR
TTGAAATATCAATAGCGATT+GGG 0.384515 6_1:-12857048 None:intergenic
GATTACGGGAAGAAGAATTC+TGG 0.384888 6_1:-12853242 None:intergenic
TAATCCTACTCGGTATTATC+AGG 0.386234 6_1:+12853260 Msa0875830:CDS
GGAATAGGAGCATTTATTCC+TGG 0.387447 6_1:-12856980 None:intergenic
TGTTTCTATCATTCATTGAC+TGG 0.390781 6_1:-12851893 None:intergenic
ATATGATCGCGGATATGCTT+TGG 0.392320 6_1:+12851953 Msa0875830:CDS
TTAAGCTTTGATGGTCCTCC+AGG 0.393604 6_1:+12857142 Msa0875830:CDS
CCTAGTGAGGTGTTGGAATC+TGG 0.394089 6_1:+12850667 Msa0875830:CDS
TGATGCAACTCGTCAGCTCT+TGG 0.396101 6_1:+12853329 Msa0875830:CDS
TATGATCGCGGATATGCTTT+GGG 0.397030 6_1:+12851954 Msa0875830:CDS
GATAATACCGAGTAGGATTA+CGG 0.400317 6_1:-12853257 None:intergenic
GTCGATGAGGGAGGGAGGGA+AGG 0.402870 6_1:-12847804 None:intergenic
ACATACAAAGTTACCAGAAA+TGG 0.403411 6_1:-12857712 None:intergenic
CTATTGATATTTCAAGGAAC+TGG 0.408639 6_1:+12857056 Msa0875830:CDS
AAACAAAAGTGTCGAGAACT+TGG 0.410087 6_1:+12849543 Msa0875830:CDS
CTTGGGAGGAAGTGATCCTT+TGG 0.410748 6_1:+12849561 Msa0875830:CDS
ATAGGCGATTTAAGCTTTGA+TGG 0.412891 6_1:+12857133 Msa0875830:CDS
TCGATGAGGGAGGGAGGGAA+GGG 0.416169 6_1:-12847803 None:intergenic
TCATCGGCCTTCTCTGGAAT+AGG 0.416857 6_1:-12856995 None:intergenic
CAAGAGGATGGGGAAATTAT+CGG 0.425008 6_1:+12856914 Msa0875830:CDS
ATGAAAGATTGTGGGCTGCC+AGG 0.425714 6_1:+12857014 Msa0875830:CDS
CTCCTAATTCAATGGCAGAT+TGG 0.427340 6_1:+12857227 Msa0875830:CDS
TATTATCAGGATTCTTCTGC+TGG 0.431768 6_1:+12853273 Msa0875830:CDS
CAATCGCTATTGATATTTCA+AGG 0.431967 6_1:+12857050 Msa0875830:CDS
CATCATCATCAACAGTAATC+CGG 0.432690 6_1:-12850314 None:intergenic
AAAATGAGTGTTGAATTTCC+AGG 0.435678 6_1:+12856962 Msa0875830:CDS
ACCAATTGCAATGCTTCCAT+TGG 0.437382 6_1:-12849791 None:intergenic
CTGCTCAATCTCTCTACTCC+AGG 0.438083 6_1:+12847768 Msa0875830:five_prime_UTR
TCACAACCAACCAATATGAT+TGG 0.438814 6_1:-12857626 None:intergenic
CCTCTCATTTACTTGTACAA+TGG 0.440060 6_1:+12857770 Msa0875830:three_prime_UTR
CCATGTTTCTCCTAATTCAA+TGG 0.442589 6_1:+12857219 Msa0875830:CDS
GATGCAACTCGTCAGCTCTT+GGG 0.444691 6_1:+12853330 Msa0875830:CDS
GAATTGTGTCCTGGGTCCCC+TGG 0.446751 6_1:-12857160 None:intergenic
AAAGATGTTAGTCCGATAGA+TGG 0.447348 6_1:+12851915 Msa0875830:CDS
AAATGTGATGAATTGTGTCC+TGG 0.452816 6_1:-12857169 None:intergenic
TCTTCTGCTGGAAAGTATGC+TGG 0.453089 6_1:+12853285 Msa0875830:CDS
AGTCGGAGGTGATGACTAAT+GGG 0.458483 6_1:+12857475 Msa0875830:exon
CGATGAGGGAGGGAGGGAAG+GGG 0.459582 6_1:-12847802 None:intergenic
TCCAATGGAAGCATTGCAAT+TGG 0.460108 6_1:+12849790 Msa0875830:CDS
CGAGATTCTGGTAGCAGATA+CGG 0.462546 6_1:+12857352 Msa0875830:CDS
GGATACCCACCAGGATATCT+TGG 0.469069 6_1:+12856278 Msa0875830:CDS
CAATTTAACGATAGGTGGTC+AGG 0.469430 6_1:+12857436 Msa0875830:CDS
GGATTTGGAAGTGGGTTTGG+AGG 0.470711 6_1:+12849678 Msa0875830:CDS
ACTTCCAAATCCTTCTTGAC+AGG 0.474529 6_1:-12849667 None:intergenic
AGACATGTTTAGCATGCCAT+TGG 0.478389 6_1:-12850517 None:intergenic
ATAATACCGAGTAGGATTAC+GGG 0.480411 6_1:-12853256 None:intergenic
GAAGGGTCGATGAGGGAGGG+AGG 0.482579 6_1:-12847809 None:intergenic
CTCGTCAGCTCTTGGGCTTG+GGG 0.485613 6_1:+12853337 Msa0875830:CDS
CATCAACATGATCAGAGAAT+AGG 0.487863 6_1:+12857115 Msa0875830:CDS
GTCAAGAAGGATTTGGAAGT+GGG 0.488749 6_1:+12849670 Msa0875830:CDS
TTTCATCTCAATTTAACGAT+AGG 0.491582 6_1:+12857428 Msa0875830:CDS
CTTGAAATATCAATAGCGAT+TGG 0.496336 6_1:-12857049 None:intergenic
ATTCTGTTAAGCCACGGAGG+TGG 0.496696 6_1:-12856245 None:intergenic
AAGAAGAATTCTGGTTCCGT+TGG 0.497068 6_1:-12853233 None:intergenic
AACAAGCCAATCATATTGGT+TGG 0.500825 6_1:+12857620 Msa0875830:three_prime_UTR
GGGTTTGTTTAGAAATGGAT+GGG 0.500867 6_1:+12849482 Msa0875830:intron
AGAGGGAGAATTTGGAGAAG+CGG 0.501404 6_1:-12847837 None:intergenic
TTTGGAGAAGCGGAATTTGA+AGG 0.501965 6_1:-12847827 None:intergenic
TGTCAAGAAGGATTTGGAAG+TGG 0.505899 6_1:+12849669 Msa0875830:CDS
AAGGGTCGATGAGGGAGGGA+GGG 0.506429 6_1:-12847808 None:intergenic
CTTAACAGAATGAGAGAACT+AGG 0.508140 6_1:+12856257 Msa0875830:CDS
CCAGATTCCAACACCTCACT+AGG 0.508218 6_1:-12850667 None:intergenic
TTCTGTTAAGCCACGGAGGT+GGG 0.508255 6_1:-12856244 None:intergenic
AGGGTTTGTTTAGAAATGGA+TGG 0.508340 6_1:+12849481 Msa0875830:intron
TGAAAGATTGTGGGCTGCCA+GGG 0.508908 6_1:+12857015 Msa0875830:CDS
GACATGTTTAGCATGCCATT+GGG 0.511615 6_1:-12850516 None:intergenic
AGAGTGTGATAATTCCTTGC+CGG 0.512593 6_1:+12849624 Msa0875830:CDS
CATCTCAATTTAACGATAGG+TGG 0.512936 6_1:+12857431 Msa0875830:CDS
AGAAGAATTCTGGTTCCGTT+GGG 0.513110 6_1:-12853232 None:intergenic
GCATATCCGCGATCATATAG+AGG 0.518051 6_1:-12851948 None:intergenic
TGAAATATCAATAGCGATTG+GGG 0.519451 6_1:-12857047 None:intergenic
TGCTCAATCTCTCTACTCCA+GGG 0.526982 6_1:+12847769 Msa0875830:five_prime_UTR
TTGGAATTCAGATGAGGATG+AGG 0.528886 6_1:+12856841 Msa0875830:intron
CTGGAAAGTATGCTGGTTTG+AGG 0.529050 6_1:+12853292 Msa0875830:CDS
ATCATCATCAACAGTAATCC+GGG 0.533669 6_1:-12850313 None:intergenic
TTTCAACCTAGGTTTGGTAG+TGG 0.534288 6_1:+12857196 Msa0875830:CDS
TTTCAGGTGTTAAAAGAGCC+CGG 0.534868 6_1:+12850295 Msa0875830:intron
CTTCTTCCCGTAATCCTACT+CGG 0.535905 6_1:+12853250 Msa0875830:CDS
TCTGATCATGTTGATGTCCT+CGG 0.537568 6_1:-12857108 None:intergenic
AAGTATGCTGGTTTGAGGCC+AGG 0.537762 6_1:+12853297 Msa0875830:CDS
TGAACCGCAATTGAAACATC+GGG 0.541366 6_1:-12853133 None:intergenic
TTTGAAGGGTCGATGAGGGA+GGG 0.542796 6_1:-12847812 None:intergenic
TGACATGAACTGAAGGTTGA+TGG 0.543396 6_1:-12850338 None:intergenic
TCAATGGCAGATTGGAGTAG+TGG 0.544632 6_1:+12857235 Msa0875830:CDS
CGGAATTTGAAGGGTCGATG+AGG 0.545633 6_1:-12847817 None:intergenic
CAGATTCTTCAAAGCCAAAA+CGG 0.546637 6_1:+12856939 Msa0875830:CDS
GCCATGGCAGAACAAGAGGA+TGG 0.547053 6_1:+12856902 Msa0875830:CDS
CAATGCCACAAACCTTGTTA+GGG 0.549895 6_1:-12850370 None:intergenic
GTGAATATTGTTATGCCAGA+AGG 0.550245 6_1:-12856872 None:intergenic
GAAGGCCGATGAAAGATTGT+GGG 0.551865 6_1:+12857006 Msa0875830:CDS
TTCTGCTCAGGATCCTAGTG+AGG 0.552249 6_1:+12850654 Msa0875830:intron
TAGTGTTTCTCTCAAGAATG+AGG 0.553185 6_1:+12849762 Msa0875830:CDS
TTGGAGAAGCGGAATTTGAA+GGG 0.553843 6_1:-12847826 None:intergenic
CAATGGCAGATTGGAGTAGT+GGG 0.555165 6_1:+12857236 Msa0875830:CDS
CCATGGCAGAACAAGAGGAT+GGG 0.555997 6_1:+12856903 Msa0875830:CDS
AGAAGGCCGATGAAAGATTG+TGG 0.556141 6_1:+12857005 Msa0875830:CDS
CCTTCCCGATGTTTCAATTG+CGG 0.557434 6_1:+12853129 Msa0875830:CDS
GGCACAGAATTACCATCTAT+CGG 0.557760 6_1:-12851927 None:intergenic
AGCATTGCAATTGGTAGAAG+AGG 0.559100 6_1:+12849799 Msa0875830:CDS
TCATGTCCAACACATATAGC+AGG 0.559953 6_1:-12850706 None:intergenic
GGGGACACTTCCTCATGCAT+AGG 0.560178 6_1:-12857265 None:intergenic
AGATACGGAAACTTTAGCTC+TGG 0.560795 6_1:+12857367 Msa0875830:CDS
GTGTTCTGAACCTGTCAAGA+AGG 0.565955 6_1:+12849657 Msa0875830:CDS
GTCATCACCTCCGACTATGA+TGG 0.566042 6_1:-12857468 None:intergenic
AAGAATGAGGAGAGTTCCAA+TGG 0.566385 6_1:+12849775 Msa0875830:CDS
TAAATTACAGTCGTTCTGGA+TGG 0.567130 6_1:+12851866 Msa0875830:intron
ATTTGAAGGGTCGATGAGGG+AGG 0.569317 6_1:-12847813 None:intergenic
TAAATTGAGATGAAAGATCT+CGG 0.571397 6_1:-12857420 None:intergenic
GGCAGCCCACAATCTTTCAT+CGG 0.571787 6_1:-12857011 None:intergenic
GATGGTCCTCCAGGGGACCC+AGG 0.573651 6_1:+12857151 Msa0875830:CDS
TCAGGATCCTAGTGAGGTGT+TGG 0.576552 6_1:+12850660 Msa0875830:intron
TACTACAGCAATGGTCCCAA+TGG 0.581162 6_1:+12850501 Msa0875830:CDS
CATGGCAGAACAAGAGGATG+GGG 0.581297 6_1:+12856904 Msa0875830:CDS
ATGAACCGCAATTGAAACAT+CGG 0.581616 6_1:-12853134 None:intergenic
AACAAAAGTGTCGAGAACTT+GGG 0.584765 6_1:+12849544 Msa0875830:CDS
TCGTCAGCTCTTGGGCTTGG+GGG 0.587331 6_1:+12853338 Msa0875830:CDS
AAATGCTCCTATTCCAGAGA+AGG 0.588802 6_1:+12856988 Msa0875830:CDS
TGAGGCCATGGCAGAACAAG+AGG 0.589886 6_1:+12856898 Msa0875830:CDS
AGCATAACTTAGAAAGAGAG+AGG 0.589893 6_1:-12847855 None:intergenic
AGCTGATGACTCAAATAATG+TGG 0.592292 6_1:+12851986 Msa0875830:CDS
GAAGGGGTTAATTGAAACCC+TGG 0.593125 6_1:-12847786 None:intergenic
TACGGAAACTTTAGCTCTGG+AGG 0.596243 6_1:+12857370 Msa0875830:CDS
ATATTGTTATGCCAGAAGGC+TGG 0.597106 6_1:-12856868 None:intergenic
TGCTTGAATAATGAAGAGAA+TGG 0.597859 6_1:-12857303 None:intergenic
GGTAAGTAAGCAATGAACAA+AGG 0.598113 6_1:-12857749 None:intergenic
TTCAGGAATTACTACAGCAA+TGG 0.599933 6_1:+12850492 Msa0875830:CDS
CTATAGCAGTCAAGATGTGA+AGG 0.603670 6_1:-12857689 None:intergenic
AATTGGACTTACATTTGATG+AGG 0.604998 6_1:-12850540 None:intergenic
TTATAACTGACATGAACTGA+AGG 0.606662 6_1:-12850345 None:intergenic
TCTCTCATTCTGTTAAGCCA+CGG 0.607358 6_1:-12856251 None:intergenic
TAAGCTTTGATGGTCCTCCA+GGG 0.607911 6_1:+12857143 Msa0875830:CDS
AAGCTTTGATGGTCCTCCAG+GGG 0.611058 6_1:+12857144 Msa0875830:CDS
GGAATTTGAAGGGTCGATGA+GGG 0.612542 6_1:-12847816 None:intergenic
GAATTCAGATGAGGATGAGG+AGG 0.614080 6_1:+12856844 Msa0875830:intron
AGGAAGTGATCCTTTGGACG+AGG 0.616410 6_1:+12849567 Msa0875830:CDS
CTACCAGAATCTCGTCCCAA+CGG 0.617551 6_1:-12857343 None:intergenic
GTTGCATCATCAAGAGCACC+TGG 0.619168 6_1:-12853315 None:intergenic
TGGGGAAGAGCATATAAATG+AGG 0.621830 6_1:+12849501 Msa0875830:CDS
GGAGGTGACAGAGACAGTTG+TGG 0.622322 6_1:+12849696 Msa0875830:CDS
GAATCCTGATAATACCGAGT+AGG 0.623933 6_1:-12853264 None:intergenic
CGCTAATCTGAACTCACACA+TGG 0.626264 6_1:-12857515 None:intergenic
AATGTGATGAATTGTGTCCT+GGG 0.626839 6_1:-12857168 None:intergenic
GGTTTGTTTAGAAATGGATG+GGG 0.629357 6_1:+12849483 Msa0875830:exon
ATGCTTTGAGAGAATGTCCA+AGG 0.630153 6_1:+12853163 Msa0875830:CDS
CATAACAATATTCACTGATG+AGG 0.630778 6_1:+12856880 Msa0875830:CDS
AATATTCACTGATGAGGCCA+TGG 0.630850 6_1:+12856886 Msa0875830:CDS
GCATAACTTAGAAAGAGAGA+GGG 0.636801 6_1:-12847854 None:intergenic
TTGTGTCCTGGGTCCCCTGG+AGG 0.637602 6_1:-12857157 None:intergenic
GAGACCGTTACCATCATAGT+CGG 0.642040 6_1:+12857458 Msa0875830:CDS
TCAGTTATAAGTCCCTAACA+AGG 0.644850 6_1:+12850358 Msa0875830:CDS
AGGAGCTTGACCCACCTCCG+TGG 0.648686 6_1:+12856234 Msa0875830:intron
TTCATTATTCAAGCACCGAG+AGG 0.651037 6_1:+12857311 Msa0875830:CDS
AAAAGTGTCGAGAACTTGGG+AGG 0.652938 6_1:+12849547 Msa0875830:CDS
TGGGAGAAGTCCTATGCATG+AGG 0.653384 6_1:+12857255 Msa0875830:CDS
CTCATTCTGTTAAGCCACGG+AGG 0.656893 6_1:-12856248 None:intergenic
CTAATGGGACATGAATCACA+CGG 0.657030 6_1:+12857490 Msa0875830:three_prime_UTR
CCATTGTACAAGTAAATGAG+AGG 0.659369 6_1:-12857770 None:intergenic
CCGCAATTGAAACATCGGGA+AGG 0.663518 6_1:-12853129 None:intergenic
CCATTGAATTAGGAGAAACA+TGG 0.664710 6_1:-12857219 None:intergenic
ACATGGCCACTACCAAACCT+AGG 0.668639 6_1:-12857202 None:intergenic
CAATGAACAAAGGAAAACAA+AGG 0.668841 6_1:-12857739 None:intergenic
ACCGTTACCATCATAGTCGG+AGG 0.669810 6_1:+12857461 Msa0875830:CDS
ACATGAATCAAAATCTTCCG+TGG 0.673459 6_1:+12850723 Msa0875830:CDS
ACCTCCGACTATGATGGTAA+CGG 0.673721 6_1:-12857462 None:intergenic
TCTGTGCCTCTATATGATCG+CGG 0.676036 6_1:+12851942 Msa0875830:CDS
TAATGGGACATGAATCACAC+GGG 0.676747 6_1:+12857491 Msa0875830:three_prime_UTR
GCAGCAAACTCAAATCCCAA+CGG 0.698885 6_1:+12853217 Msa0875830:CDS
TGAGGTGTTGGAATCTGGTG+AGG 0.699952 6_1:+12850672 Msa0875830:CDS
TTGACAGCAACGTTATCACG+AGG 0.705632 6_1:-12853186 None:intergenic
GAAATATCAATAGCGATTGG+GGG 0.716240 6_1:-12857046 None:intergenic
ATATTTCACATACTACAACA+TGG 0.717855 6_1:-12857845 None:intergenic
AGAGAACTAGGATACCCACC+AGG 0.745503 6_1:+12856269 Msa0875830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTATATTATTAATTA+AGG - chr6_1:12854476-12854495 None:intergenic 0.0%
!!! ATGAAATTTTTTAATACAAT+TGG - chr6_1:12850560-12850579 None:intergenic 10.0%
!! TTTAATTAATACACAATTTA+TGG + chr6_1:12851473-12851492 Msa0875830:intron 10.0%
!!! AAAAACACTTTTTTTTTTTT+GGG - chr6_1:12851528-12851547 None:intergenic 10.0%
!! AAAATAAATGTAACATATTT+AGG - chr6_1:12851554-12851573 None:intergenic 10.0%
!! TATATTTCAATTTGTAAATT+TGG + chr6_1:12851616-12851635 Msa0875830:intron 10.0%
!!! ATTTATTTTACATTACAAAA+AGG + chr6_1:12851794-12851813 Msa0875830:intron 10.0%
!! ACAATACAAAAATTATAATT+TGG - chr6_1:12852809-12852828 None:intergenic 10.0%
!! AAAACATATATAAAATGTTA+AGG - chr6_1:12852873-12852892 None:intergenic 10.0%
!!! TTAACATTTTATATATGTTT+TGG + chr6_1:12852872-12852891 Msa0875830:intron 10.0%
!! TTTAAATAAGTAAATAACAA+TGG + chr6_1:12854222-12854241 Msa0875830:intron 10.0%
!!! GATTTTATACATAAAAAATA+TGG + chr6_1:12854815-12854834 Msa0875830:intron 10.0%
!! TTTATTTCAGAAAAAAAAAT+TGG + chr6_1:12854875-12854894 Msa0875830:intron 10.0%
!!! TCTTTTTTAGTTGAAAATAA+TGG + chr6_1:12847980-12847999 Msa0875830:intron 15.0%
!!! CTTTTTTAGTTGAAAATAAT+GGG + chr6_1:12847981-12848000 Msa0875830:intron 15.0%
!!! TTTTTGAGTAGAAAAAAAAT+TGG + chr6_1:12848142-12848161 Msa0875830:intron 15.0%
!!! TTTTGAGTAGAAAAAAAATT+GGG + chr6_1:12848143-12848162 Msa0875830:intron 15.0%
!! ATAAAAATTTAGTGTATGTT+TGG + chr6_1:12848292-12848311 Msa0875830:intron 15.0%
!! ATTAATGCTTATCATTATAA+GGG + chr6_1:12849167-12849186 Msa0875830:intron 15.0%
!! ATTATAAAATAAAATAGCAC+AGG - chr6_1:12849975-12849994 None:intergenic 15.0%
!!! TTAGAATATGTTTTATGTAA+TGG + chr6_1:12850110-12850129 Msa0875830:intron 15.0%
!! AAAAAGAAAGAATAGTTAAT+TGG - chr6_1:12851146-12851165 None:intergenic 15.0%
!!! ATTAACTATTCTTTCTTTTT+TGG + chr6_1:12851146-12851165 Msa0875830:intron 15.0%
!!! AAAATTCAATTTTAAACTAG+AGG - chr6_1:12851336-12851355 None:intergenic 15.0%
!!! GAAAAACACTTTTTTTTTTT+TGG - chr6_1:12851529-12851548 None:intergenic 15.0%
!!! AATTTTATACATGAATTTCT+AGG + chr6_1:12851589-12851608 Msa0875830:intron 15.0%
!! TTACTTTGTATTATTTAGTA+TGG + chr6_1:12852023-12852042 Msa0875830:intron 15.0%
!!! ATTATACAACTATTTTGATT+GGG + chr6_1:12852600-12852619 Msa0875830:intron 15.0%
!!! TATATTTTTTTATATTCCAG+TGG + chr6_1:12853087-12853106 Msa0875830:intron 15.0%
!! TAATAATAGAAGGATAAATT+TGG - chr6_1:12853536-12853555 None:intergenic 15.0%
!! TTATTAATTAAGGAGTAAAA+AGG - chr6_1:12854466-12854485 None:intergenic 15.0%
!! ATCAAAAGAAACATATTTAT+TGG - chr6_1:12855094-12855113 None:intergenic 15.0%
!!! AGGATAATTATTTTCTTAAT+TGG - chr6_1:12856387-12856406 None:intergenic 15.0%
!! GTAAATAATAAACAATCATA+TGG - chr6_1:12856470-12856489 None:intergenic 15.0%
!!! TATATTTAACTTAACACTAT+TGG + chr6_1:12856822-12856841 Msa0875830:intron 15.0%
!!! TTTGATAGAATTGATTTTGT+AGG - chr6_1:12848543-12848562 None:intergenic 20.0%
!! CATAATCAATTCTGTAAAAA+TGG + chr6_1:12848864-12848883 Msa0875830:intron 20.0%
!!! TTTTGGAATAGATAGAAAAA+GGG + chr6_1:12848891-12848910 Msa0875830:intron 20.0%
!! TTTATGTATAGACAGAAAAA+GGG + chr6_1:12849026-12849045 Msa0875830:intron 20.0%
!! CATTAATGCTTATCATTATA+AGG + chr6_1:12849166-12849185 Msa0875830:intron 20.0%
!!! TTTTTGAATTGAAACAAACA+GGG + chr6_1:12849462-12849481 Msa0875830:intron 20.0%
!! ACTCACTTATTTACTATTAA+GGG - chr6_1:12850602-12850621 None:intergenic 20.0%
!! TACTCACTTATTTACTATTA+AGG - chr6_1:12850603-12850622 None:intergenic 20.0%
!! TAGTAAATAAGTGAGTAAAT+AGG + chr6_1:12850606-12850625 Msa0875830:intron 20.0%
!!! AATAGTTAATTGGTTTAATG+AGG - chr6_1:12851136-12851155 None:intergenic 20.0%
!! AGTGACAAAAGAATATTAAT+TGG - chr6_1:12851180-12851199 None:intergenic 20.0%
!!! AAAAAATAGAGCATTACTAA+AGG - chr6_1:12851364-12851383 None:intergenic 20.0%
!! ATACACAATTTATGGTTTAT+TGG + chr6_1:12851481-12851500 Msa0875830:intron 20.0%
!! ATAAATGTAACATATTTAGG+TGG - chr6_1:12851551-12851570 None:intergenic 20.0%
!!! TACATTTATTTTTGTTGATC+AGG + chr6_1:12851562-12851581 Msa0875830:intron 20.0%
!! TTTCAATTTGTAAATTTGGT+AGG + chr6_1:12851620-12851639 Msa0875830:intron 20.0%
!!! GATTATACAACTATTTTGAT+TGG + chr6_1:12852599-12852618 Msa0875830:intron 20.0%
!! TTACTTGTAAAAAATAGTTC+CGG + chr6_1:12852971-12852990 Msa0875830:intron 20.0%
!!! AGAATACATTTTTAACATCT+AGG + chr6_1:12853395-12853414 Msa0875830:intron 20.0%
!!! ATTTGAAGAGTCTTATAAAA+TGG + chr6_1:12853636-12853655 Msa0875830:intron 20.0%
!!! TTTGAAGAGTCTTATAAAAT+GGG + chr6_1:12853637-12853656 Msa0875830:intron 20.0%
!!! TTCATTTTGACTGTAAAAAA+AGG - chr6_1:12853954-12853973 None:intergenic 20.0%
!! AGATCTAACTTTGTAAAAAA+AGG - chr6_1:12854086-12854105 None:intergenic 20.0%
!! ATAACAATGGTAAATAACAA+TGG + chr6_1:12854235-12854254 Msa0875830:intron 20.0%
!!! AAGGTATTAAATTGTGAAAT+TGG - chr6_1:12855020-12855039 None:intergenic 20.0%
!! TTAGATCTTAAACTATACAA+AGG - chr6_1:12855228-12855247 None:intergenic 20.0%
!! TTATTGAGAAATTCTCTAAT+TGG - chr6_1:12855481-12855500 None:intergenic 20.0%
!! AATTAGAGAATTTCTCAATA+AGG + chr6_1:12855480-12855499 Msa0875830:intron 20.0%
!! AATTTCTCAATAAGGAAAAT+AGG + chr6_1:12855488-12855507 Msa0875830:intron 20.0%
!! ATTTCTCAATAAGGAAAATA+GGG + chr6_1:12855489-12855508 Msa0875830:intron 20.0%
!! ATAGAGAATAACACTAATTA+TGG + chr6_1:12855569-12855588 Msa0875830:intron 20.0%
!!! GTCTATTGTATTTTTTGTTT+TGG + chr6_1:12856335-12856354 Msa0875830:intron 20.0%
!!! CTTAATTGGTTTATTATCAA+TGG - chr6_1:12856373-12856392 None:intergenic 20.0%
!!! AACATTTTTCAGAGATATAA+AGG - chr6_1:12856587-12856606 None:intergenic 20.0%
!!! TTGCTTCAATATCATATTTT+TGG + chr6_1:12856742-12856761 Msa0875830:intron 20.0%
!! ATATACCAAACAAGAAAAAA+TGG - chr6_1:12856807-12856826 None:intergenic 20.0%
!!! ATTTTATCGTTTTCATACAT+TGG + chr6_1:12857655-12857674 Msa0875830:three_prime_UTR 20.0%
!!! TTTTATCGTTTTCATACATT+GGG + chr6_1:12857656-12857675 Msa0875830:three_prime_UTR 20.0%
!!! ATAATTGATTTTGACTTGCT+TGG + chr6_1:12848359-12848378 Msa0875830:intron 25.0%
!!! TTTTTATTCTAGTTGACGTT+AGG + chr6_1:12848417-12848436 Msa0875830:intron 25.0%
!!! TGATTTTGTAGGATTGATTT+AGG - chr6_1:12848532-12848551 None:intergenic 25.0%
! AATCCTAGTAGAAAGAAAAA+AGG + chr6_1:12848584-12848603 Msa0875830:intron 25.0%
! ATCCTAGTAGAAAGAAAAAA+GGG + chr6_1:12848585-12848604 Msa0875830:intron 25.0%
!! GAAAAAAGGGTTTGTTTATT+AGG + chr6_1:12848598-12848617 Msa0875830:intron 25.0%
! TTGTTTATTAGGTGTATGTT+TGG + chr6_1:12848609-12848628 Msa0875830:intron 25.0%
!! AAGATAAAGTGATTTGTGTT+TGG + chr6_1:12848702-12848721 Msa0875830:intron 25.0%
! AGAATTGATTATGTCATGTT+TGG - chr6_1:12848857-12848876 None:intergenic 25.0%
!!! CTTTTGGAATAGATAGAAAA+AGG + chr6_1:12848890-12848909 Msa0875830:intron 25.0%
! CTTTATGTATAGACAGAAAA+AGG + chr6_1:12849025-12849044 Msa0875830:intron 25.0%
!! CTTTTTGAATTGAAACAAAC+AGG + chr6_1:12849461-12849480 Msa0875830:intron 25.0%
! AGTAGTCAATTTCATATGTA+GGG - chr6_1:12849929-12849948 None:intergenic 25.0%
! ATGAAATTGACTACTCAAAA+TGG + chr6_1:12849934-12849953 Msa0875830:intron 25.0%
! TCTGTGATAAATCTTGAAAT+TGG + chr6_1:12850046-12850065 Msa0875830:intron 25.0%
!! ATGTTTTATGTAATGGTTCA+CGG + chr6_1:12850117-12850136 Msa0875830:intron 25.0%
! TAACATATCAAAGTAGAACT+AGG - chr6_1:12850181-12850200 None:intergenic 25.0%
!! TTTTTATGTGATCTACATTG+CGG + chr6_1:12850244-12850263 Msa0875830:intron 25.0%
!!! GGTTTTCATTGATTGAAATT+TGG + chr6_1:12850429-12850448 Msa0875830:intron 25.0%
! AGGATAATGAACATGATATT+TGG + chr6_1:12851745-12851764 Msa0875830:intron 25.0%
! GTAAAATAAATAATCCCAAG+AGG - chr6_1:12851785-12851804 None:intergenic 25.0%
! CGACTGTAATTTAAAGAAAT+GGG - chr6_1:12851859-12851878 None:intergenic 25.0%
! ACGACTGTAATTTAAAGAAA+TGG - chr6_1:12851860-12851879 None:intergenic 25.0%
!!! AAACATCTGTAGTGTTTTAA+TGG - chr6_1:12852556-12852575 None:intergenic 25.0%
!!! TAGGTCTTCATGTTTTTTAT+GGG + chr6_1:12853414-12853433 Msa0875830:intron 25.0%
!! AGATCGTACTTTTCTTAAAT+GGG - chr6_1:12853509-12853528 None:intergenic 25.0%
! TTCTCTCTCTTAATAATAGA+AGG - chr6_1:12853546-12853565 None:intergenic 25.0%
! CTATTATTAAGAGAGAGAAA+CGG + chr6_1:12853547-12853566 Msa0875830:intron 25.0%
!! GACATCAAAATTTTACAAGA+GGG + chr6_1:12853659-12853678 Msa0875830:intron 25.0%
! TAGTGTATTGTATTCTTGAT+TGG + chr6_1:12854157-12854176 Msa0875830:intron 25.0%
! TATTGTATTCTTGATTGGAT+TGG + chr6_1:12854162-12854181 Msa0875830:intron 25.0%
! ATTGTATTCTTGATTGGATT+GGG + chr6_1:12854163-12854182 Msa0875830:intron 25.0%
! TCTCGTATATTTGCATATAT+TGG + chr6_1:12854781-12854800 Msa0875830:intron 25.0%
!!! TCTTTTTAAGGAGAATAAGT+GGG + chr6_1:12854924-12854943 Msa0875830:intron 25.0%
! TTCTTATTCTGATGTTTACT+AGG - chr6_1:12855159-12855178 None:intergenic 25.0%
! CAGAATAAGAACAATATTTG+CGG + chr6_1:12855168-12855187 Msa0875830:intron 25.0%
! TTCAGATCAGATGAATAATA+TGG + chr6_1:12855422-12855441 Msa0875830:intron 25.0%
!! CCTTTTGATATAATCTACTT+GGG - chr6_1:12855529-12855548 None:intergenic 25.0%
!! ACCTTTTGATATAATCTACT+TGG - chr6_1:12855530-12855549 None:intergenic 25.0%
!! AATAGGAGTTTTGCAAAATA+GGG - chr6_1:12855762-12855781 None:intergenic 25.0%
!!! AAGTGGTTGAAGTTTTTTAT+AGG - chr6_1:12855918-12855937 None:intergenic 25.0%
! ATATATCTTCTTTCACTGTT+AGG - chr6_1:12855996-12856015 None:intergenic 25.0%
! ATGAGATTTATACACACATA+AGG + chr6_1:12856046-12856065 Msa0875830:intron 25.0%
!! TATTTACTTATGACTTGTGA+TGG + chr6_1:12856133-12856152 Msa0875830:intron 25.0%
! TCTTTGATCTTTAATTGAGA+CGG + chr6_1:12856313-12856332 Msa0875830:intron 25.0%
!! AGTAGTACTTTTCCATTTTA+TGG + chr6_1:12856440-12856459 Msa0875830:intron 25.0%
! TCATATGGAAATCCATAAAA+TGG - chr6_1:12856455-12856474 None:intergenic 25.0%
! TTGAAATATCAATAGCGATT+GGG - chr6_1:12857051-12857070 None:intergenic 25.0%
! TAAATTGAGATGAAAGATCT+CGG - chr6_1:12857423-12857442 None:intergenic 25.0%
! TTTCATCTCAATTTAACGAT+AGG + chr6_1:12857428-12857447 Msa0875830:CDS 25.0%
CGTTATAGTGAAGTAAATTG+AGG - chr6_1:12847911-12847930 None:intergenic 30.0%
!! TTGAAAATAATGGGTTTCTG+TGG + chr6_1:12847990-12848009 Msa0875830:intron 30.0%
!! AATTGGATTTCTGGTTCTTA+AGG + chr6_1:12848014-12848033 Msa0875830:intron 30.0%
GAAAAAAAATTGGGTTTGTG+TGG + chr6_1:12848152-12848171 Msa0875830:intron 30.0%
!! GATCAGAATTGATTTGATTC+TGG + chr6_1:12848330-12848349 Msa0875830:intron 30.0%
! GGTTAAAAGTGATTTGTGTT+TGG - chr6_1:12848511-12848530 None:intergenic 30.0%
!!! AACCCTTTTTTCTTTCTACT+AGG - chr6_1:12848590-12848609 None:intergenic 30.0%
ATTAGGTGTATGTTTGGTTA+TGG + chr6_1:12848615-12848634 Msa0875830:intron 30.0%
TTAGGTGTATGTTTGGTTAT+GGG + chr6_1:12848616-12848635 Msa0875830:intron 30.0%
!! TCTGTAAAAATGGACTCTTT+TGG + chr6_1:12848874-12848893 Msa0875830:intron 30.0%
! AAAAAGGGCTTGTTTAGATA+TGG + chr6_1:12848906-12848925 Msa0875830:intron 30.0%
AAAAAGGGTTTGTGTAGAAA+TGG + chr6_1:12849041-12849060 Msa0875830:intron 30.0%
CTAAGATGTTTAACCAAACA+GGG - chr6_1:12849132-12849151 None:intergenic 30.0%
ACTAAGATGTTTAACCAAAC+AGG - chr6_1:12849133-12849152 None:intergenic 30.0%
GCTGTTTAAATATGCTATCT+TGG + chr6_1:12849257-12849276 Msa0875830:intron 30.0%
TCAAATAAGCAAATCCAAAC+AGG + chr6_1:12849349-12849368 Msa0875830:intron 30.0%
ACAAGAAAACACACACATAT+GGG - chr6_1:12849375-12849394 None:intergenic 30.0%
AACAAGAAAACACACACATA+TGG - chr6_1:12849376-12849395 None:intergenic 30.0%
! AAACAGGGTTTGTTTAGAAA+TGG + chr6_1:12849477-12849496 Msa0875830:intron 30.0%
GAGTAGTCAATTTCATATGT+AGG - chr6_1:12849930-12849949 None:intergenic 30.0%
! GTATGACATTTAGCTATTTC+AGG + chr6_1:12850279-12850298 Msa0875830:intron 30.0%
TTATAACTGACATGAACTGA+AGG - chr6_1:12850348-12850367 None:intergenic 30.0%
TCAGAACAACTTGTAGAAAA+GGG - chr6_1:12850396-12850415 None:intergenic 30.0%
ATCAGAACAACTTGTAGAAA+AGG - chr6_1:12850397-12850416 None:intergenic 30.0%
TGTTCTGATGTTATAATGTC+TGG + chr6_1:12850408-12850427 Msa0875830:intron 30.0%
AGCTAGTAAAAATAAGCTTC+AGG + chr6_1:12850475-12850494 Msa0875830:CDS 30.0%
AATTGGACTTACATTTGATG+AGG - chr6_1:12850543-12850562 None:intergenic 30.0%
!!! TGAATATGTTTTTTCTGCTC+AGG + chr6_1:12850642-12850661 Msa0875830:intron 30.0%
!!! TTTTTTCCTGCTATATGTGT+TGG + chr6_1:12850700-12850719 Msa0875830:CDS 30.0%
CGAATTAGAATGTAGAATGA+AGG - chr6_1:12850778-12850797 None:intergenic 30.0%
CACAGTTATGCTAATAATCA+TGG + chr6_1:12850839-12850858 Msa0875830:intron 30.0%
TATTGCTTAGTTAGGTGTAT+CGG - chr6_1:12851230-12851249 None:intergenic 30.0%
CCACAAATTATTGCTTAGTT+AGG - chr6_1:12851238-12851257 None:intergenic 30.0%
CCTAACTAAGCAATAATTTG+TGG + chr6_1:12851235-12851254 Msa0875830:intron 30.0%
TGGTAAGGTTTCACAATTTA+AGG - chr6_1:12851275-12851294 None:intergenic 30.0%
!!! TTTATTTTTGTTGATCAGGC+TGG + chr6_1:12851566-12851585 Msa0875830:intron 30.0%
CCTTGTAATGATTATTAGCA+AGG - chr6_1:12851728-12851747 None:intergenic 30.0%
CCTTGCTAATAATCATTACA+AGG + chr6_1:12851725-12851744 Msa0875830:intron 30.0%
TCTTTAAATTACAGTCGTTC+TGG + chr6_1:12851862-12851881 Msa0875830:intron 30.0%
! TGTTTCTATCATTCATTGAC+TGG - chr6_1:12851896-12851915 None:intergenic 30.0%
!!! GCTTAAGCTTTTGAGATAAT+TGG - chr6_1:12852088-12852107 None:intergenic 30.0%
! GTTGAATGAAAGTATGTGAA+TGG + chr6_1:12852115-12852134 Msa0875830:intron 30.0%
TATAAGCTCTGTTATCAATG+TGG + chr6_1:12852192-12852211 Msa0875830:intron 30.0%
TAGTTGTATAATCAGACTAG+TGG - chr6_1:12852592-12852611 None:intergenic 30.0%
!!! ACTATTTTGATTGGGTCTAT+AGG + chr6_1:12852608-12852627 Msa0875830:intron 30.0%
!!! CTATTTTGATTGGGTCTATA+GGG + chr6_1:12852609-12852628 Msa0875830:intron 30.0%
ATATAGGCATTATCATAGTG+TGG + chr6_1:12852736-12852755 Msa0875830:intron 30.0%
CTCTTAAATCAACAGTGTTA+TGG - chr6_1:12852784-12852803 None:intergenic 30.0%
TTGTATTGTGAGAATGTCTA+TGG + chr6_1:12852820-12852839 Msa0875830:intron 30.0%
GAATGTCTATGGATCATTTA+TGG + chr6_1:12852831-12852850 Msa0875830:intron 30.0%
TAGTAACATACACCAAAACA+AGG - chr6_1:12852932-12852951 None:intergenic 30.0%
!!! CTAGGTCTTCATGTTTTTTA+TGG + chr6_1:12853413-12853432 Msa0875830:intron 30.0%
! GATCGTACTTTTCTTAAATG+GGG - chr6_1:12853508-12853527 None:intergenic 30.0%
! GAGATCGTACTTTTCTTAAA+TGG - chr6_1:12853510-12853529 None:intergenic 30.0%
! GGACATCAAAATTTTACAAG+AGG + chr6_1:12853658-12853677 Msa0875830:intron 30.0%
TACAGTCAAAATGAAGAAGA+AGG + chr6_1:12853959-12853978 Msa0875830:intron 30.0%
ACAGTCAAAATGAAGAAGAA+GGG + chr6_1:12853960-12853979 Msa0875830:intron 30.0%
GAAAGATTGATTAGAGATCT+AGG + chr6_1:12853991-12854010 Msa0875830:intron 30.0%
ATCTGTAAGCTAATGTCATT+GGG - chr6_1:12854202-12854221 None:intergenic 30.0%
AATCTGTAAGCTAATGTCAT+TGG - chr6_1:12854203-12854222 None:intergenic 30.0%
TTAACTACTTTGCACTTTGA+AGG - chr6_1:12854622-12854641 None:intergenic 30.0%
! GGCTAGAAATTCTCTTTTTA+AGG + chr6_1:12854912-12854931 Msa0875830:intron 30.0%
!! CTCTTTTTAAGGAGAATAAG+TGG + chr6_1:12854923-12854942 Msa0875830:intron 30.0%
!! CTTTTTAAGGAGAATAAGTG+GGG + chr6_1:12854925-12854944 Msa0875830:intron 30.0%
TAGGGAAATAATATATGCAG+GGG - chr6_1:12854971-12854990 None:intergenic 30.0%
GTAGGGAAATAATATATGCA+GGG - chr6_1:12854972-12854991 None:intergenic 30.0%
AAATGTTGTTGCAACTCATA+TGG - chr6_1:12855058-12855077 None:intergenic 30.0%
CTATACAAAGGATTCTCTTA+AGG - chr6_1:12855216-12855235 None:intergenic 30.0%
GTTTATTCATGGAAAGTTGA+CGG + chr6_1:12855270-12855289 Msa0875830:intron 30.0%
TTTATTCATGGAAAGTTGAC+GGG + chr6_1:12855271-12855290 Msa0875830:intron 30.0%
GATTCACAAACTAACAACAA+TGG + chr6_1:12855296-12855315 Msa0875830:intron 30.0%
CTAACAACAATGGATATGTT+AGG + chr6_1:12855306-12855325 Msa0875830:intron 30.0%
! GGGTACTCATCTTATTTAAT+CGG - chr6_1:12855333-12855352 None:intergenic 30.0%
CCCAAGTAGATTATATCAAA+AGG + chr6_1:12855526-12855545 Msa0875830:intron 30.0%
AGATGTCACTAAATCTCTAA+GGG - chr6_1:12855638-12855657 None:intergenic 30.0%
! AAGTTCTAATGATGCTCTAA+AGG + chr6_1:12855692-12855711 Msa0875830:intron 30.0%
! GAATAGGAGTTTTGCAAAAT+AGG - chr6_1:12855763-12855782 None:intergenic 30.0%
! TTTTGCAAAACTCCTATTCT+TGG + chr6_1:12855764-12855783 Msa0875830:intron 30.0%
!!! TGGTTGAAGTTTTTTATAGG+AGG - chr6_1:12855915-12855934 None:intergenic 30.0%
GTCTGCATTCTATATAGTAT+AGG - chr6_1:12856165-12856184 None:intergenic 30.0%
TATAGAATGCAGACTTATGT+CGG + chr6_1:12856171-12856190 Msa0875830:intron 30.0%
!! GTTATTTTACCAAGATATCC+TGG - chr6_1:12856290-12856309 None:intergenic 30.0%
GGTTACGTGTTTGTTTATAT+GGG - chr6_1:12856503-12856522 None:intergenic 30.0%
AGGTTACGTGTTTGTTTATA+TGG - chr6_1:12856504-12856523 None:intergenic 30.0%
AACTTCTCTTGCATATGAAA+AGG - chr6_1:12856524-12856543 None:intergenic 30.0%
ATATGCAAGAGAAGTTCAAA+TGG + chr6_1:12856528-12856547 Msa0875830:intron 30.0%
GTTGTTGAATTATACGCATA+AGG + chr6_1:12856621-12856640 Msa0875830:intron 30.0%
AACAATACTTACGTTGTACT+TGG + chr6_1:12856671-12856690 Msa0875830:intron 30.0%
ACAATACTTACGTTGTACTT+GGG + chr6_1:12856672-12856691 Msa0875830:intron 30.0%
ATATATATGTGTGTGTCCTT+TGG + chr6_1:12856778-12856797 Msa0875830:intron 30.0%
CAAGAAAAAATGGAAACCAA+AGG - chr6_1:12856797-12856816 None:intergenic 30.0%
!!! GGTTTCCATTTTTTCTTGTT+TGG + chr6_1:12856799-12856818 Msa0875830:intron 30.0%
CATAACAATATTCACTGATG+AGG + chr6_1:12856880-12856899 Msa0875830:CDS 30.0%
!! AAAATGAGTGTTGAATTTCC+AGG + chr6_1:12856962-12856981 Msa0875830:CDS 30.0%
TGAAATATCAATAGCGATTG+GGG - chr6_1:12857050-12857069 None:intergenic 30.0%
CTTGAAATATCAATAGCGAT+TGG - chr6_1:12857052-12857071 None:intergenic 30.0%
CAATCGCTATTGATATTTCA+AGG + chr6_1:12857050-12857069 Msa0875830:CDS 30.0%
CTATTGATATTTCAAGGAAC+TGG + chr6_1:12857056-12857075 Msa0875830:CDS 30.0%
!!! CACATTTTAGTTTTCAACCT+AGG + chr6_1:12857185-12857204 Msa0875830:CDS 30.0%
!!! TTTAGTTTTCAACCTAGGTT+TGG + chr6_1:12857190-12857209 Msa0875830:CDS 30.0%
AATGGAATGAAAAAGGCTTT+GGG - chr6_1:12857288-12857307 None:intergenic 30.0%
TGAAGAGAATGGAATGAAAA+AGG - chr6_1:12857295-12857314 None:intergenic 30.0%
TGCTTGAATAATGAAGAGAA+TGG - chr6_1:12857306-12857325 None:intergenic 30.0%
TTCTAACAAGCCAATCATAT+TGG + chr6_1:12857616-12857635 Msa0875830:three_prime_UTR 30.0%
ACATACAAAGTTACCAGAAA+TGG - chr6_1:12857715-12857734 None:intergenic 30.0%
CAATGAACAAAGGAAAACAA+AGG - chr6_1:12857742-12857761 None:intergenic 30.0%
! GAGATTGAGCAGAATTTTGA+GGG - chr6_1:12847760-12847779 None:intergenic 35.0%
! AGAGATTGAGCAGAATTTTG+AGG - chr6_1:12847761-12847780 None:intergenic 35.0%
GCATAACTTAGAAAGAGAGA+GGG - chr6_1:12847857-12847876 None:intergenic 35.0%
AGCATAACTTAGAAAGAGAG+AGG - chr6_1:12847858-12847877 None:intergenic 35.0%
!! TAATGGGTTTCTGTGGAAAT+TGG + chr6_1:12847997-12848016 Msa0875830:intron 35.0%
TTCTGTGGAAATTGGATTTC+TGG + chr6_1:12848005-12848024 Msa0875830:intron 35.0%
!! CAGAATTGATTTGATTCTGG+AGG + chr6_1:12848333-12848352 Msa0875830:intron 35.0%
TCTTTCTACTAGGATTTGTG+CGG - chr6_1:12848580-12848599 None:intergenic 35.0%
TAGGTGTATGTTTGGTTATG+GGG + chr6_1:12848617-12848636 Msa0875830:intron 35.0%
! AACTGATTCTACTTGAAGCT+AGG - chr6_1:12848802-12848821 None:intergenic 35.0%
TCAAGTAGAATCAGTTCTGT+AGG + chr6_1:12848806-12848825 Msa0875830:intron 35.0%
TGTGGGAATTTACAACACAT+TGG + chr6_1:12849106-12849125 Msa0875830:intron 35.0%
! AGGGTTTGTTTAGAAATGGA+TGG + chr6_1:12849481-12849500 Msa0875830:intron 35.0%
! GGGTTTGTTTAGAAATGGAT+GGG + chr6_1:12849482-12849501 Msa0875830:intron 35.0%
! GGTTTGTTTAGAAATGGATG+GGG + chr6_1:12849483-12849502 Msa0875830:exon 35.0%
! TTGTTTTCAGCTTCAGAAAG+AGG - chr6_1:12849529-12849548 None:intergenic 35.0%
!! AAACAAAAGTGTCGAGAACT+TGG + chr6_1:12849543-12849562 Msa0875830:CDS 35.0%
!! AACAAAAGTGTCGAGAACTT+GGG + chr6_1:12849544-12849563 Msa0875830:CDS 35.0%
! TTTTCTGACTTTCCATCTTC+CGG - chr6_1:12849601-12849620 None:intergenic 35.0%
! TCAGAACACTGTTCATTTTC+CGG - chr6_1:12849646-12849665 None:intergenic 35.0%
TAGTGTTTCTCTCAAGAATG+AGG + chr6_1:12849762-12849781 Msa0875830:CDS 35.0%
GTGTTCTTTGATGTTCTACT+TGG + chr6_1:12849874-12849893 Msa0875830:intron 35.0%
TGTTCTACTTGGAAAACCAT+TGG + chr6_1:12849885-12849904 Msa0875830:intron 35.0%
TTTCTGTAGTCGCTTGAAAT+TGG + chr6_1:12849999-12850018 Msa0875830:intron 35.0%
TGGAATATGATGCAAGTGTT+TGG + chr6_1:12850066-12850085 Msa0875830:intron 35.0%
GGAATATGATGCAAGTGTTT+GGG + chr6_1:12850067-12850086 Msa0875830:intron 35.0%
ATTGACACTGTCAAATGCTT+CGG + chr6_1:12850204-12850223 Msa0875830:intron 35.0%
ATCATCATCAACAGTAATCC+GGG - chr6_1:12850316-12850335 None:intergenic 35.0%
CATCATCATCAACAGTAATC+CGG - chr6_1:12850317-12850336 None:intergenic 35.0%
TCAGTTATAAGTCCCTAACA+AGG + chr6_1:12850358-12850377 Msa0875830:CDS 35.0%
TTCAGGAATTACTACAGCAA+TGG + chr6_1:12850492-12850511 Msa0875830:CDS 35.0%
ACATGAATCAAAATCTTCCG+TGG + chr6_1:12850723-12850742 Msa0875830:CDS 35.0%
!! GAATGAAGGCACTTAGAAAA+AGG - chr6_1:12850764-12850783 None:intergenic 35.0%
!!! TCGTGCATTTTGAGATTTCT+AGG + chr6_1:12850795-12850814 Msa0875830:intron 35.0%
!!! CGTGCATTTTGAGATTTCTA+GGG + chr6_1:12850796-12850815 Msa0875830:intron 35.0%
! GTTTTCCTTCCTTGAAGTTT+CGG + chr6_1:12851019-12851038 Msa0875830:intron 35.0%
! AAACGCGTTTTTGTTGAAAC+CGG - chr6_1:12851067-12851086 None:intergenic 35.0%
! TGACTTTTCTGTGACTGAAA+CGG + chr6_1:12851099-12851118 Msa0875830:intron 35.0%
! AGAGTAGAGTGCTATGAATT+GGG - chr6_1:12851308-12851327 None:intergenic 35.0%
TGTGTTTATTGTCTCCTCTT+GGG + chr6_1:12851768-12851787 Msa0875830:intron 35.0%
! TAAATTACAGTCGTTCTGGA+TGG + chr6_1:12851866-12851885 Msa0875830:intron 35.0%
AAAGATGTTAGTCCGATAGA+TGG + chr6_1:12851915-12851934 Msa0875830:CDS 35.0%
AGCTGATGACTCAAATAATG+TGG + chr6_1:12851986-12852005 Msa0875830:CDS 35.0%
TAATCAGACTAGTGGTATAG+TGG - chr6_1:12852584-12852603 None:intergenic 35.0%
TGAATAAGTCCACAACATGT+TGG - chr6_1:12852644-12852663 None:intergenic 35.0%
! AAAGAATTGCTAGTTTGAGG+AGG - chr6_1:12852669-12852688 None:intergenic 35.0%
! CTCAAAGAATTGCTAGTTTG+AGG - chr6_1:12852672-12852691 None:intergenic 35.0%
ATTCTGTAACAGACTAAAGC+AGG + chr6_1:12852708-12852727 Msa0875830:intron 35.0%
TTCTGTAACAGACTAAAGCA+GGG + chr6_1:12852709-12852728 Msa0875830:intron 35.0%
TGTCTATGGATCATTTATGG+TGG + chr6_1:12852834-12852853 Msa0875830:intron 35.0%
!! TTGTCATGCATACCTTGTTT+TGG + chr6_1:12852917-12852936 Msa0875830:intron 35.0%
CAGGAATTACACTAATGAAC+CGG - chr6_1:12852993-12853012 None:intergenic 35.0%
! ATCTATGATTTTCAGACCAC+TGG - chr6_1:12853106-12853125 None:intergenic 35.0%
ATGAACCGCAATTGAAACAT+CGG - chr6_1:12853137-12853156 None:intergenic 35.0%
ATAATACCGAGTAGGATTAC+GGG - chr6_1:12853259-12853278 None:intergenic 35.0%
GATAATACCGAGTAGGATTA+CGG - chr6_1:12853260-12853279 None:intergenic 35.0%
TAATCCTACTCGGTATTATC+AGG + chr6_1:12853260-12853279 Msa0875830:CDS 35.0%
TATTATCAGGATTCTTCTGC+TGG + chr6_1:12853273-12853292 Msa0875830:CDS 35.0%
! GGGTTGAGAATGTTGTTTAT+TGG + chr6_1:12853434-12853453 Msa0875830:intron 35.0%
ACAAATAAGAATGGAGGTAG+TGG - chr6_1:12853481-12853500 None:intergenic 35.0%
GGTCTTACAAATAAGAATGG+AGG - chr6_1:12853487-12853506 None:intergenic 35.0%
TGGGGTCTTACAAATAAGAA+TGG - chr6_1:12853490-12853509 None:intergenic 35.0%
TATTAAGAGAGAGAAACGGT+TGG + chr6_1:12853551-12853570 Msa0875830:intron 35.0%
TATGATTCCCTCCATTAGTT+AGG + chr6_1:12853577-12853596 Msa0875830:intron 35.0%
ATGATTCCCTCCATTAGTTA+GGG + chr6_1:12853578-12853597 Msa0875830:intron 35.0%
TACAAGAGGGTCTTACATAT+AGG + chr6_1:12853672-12853691 Msa0875830:intron 35.0%
ACAAGAGGGTCTTACATATA+GGG + chr6_1:12853673-12853692 Msa0875830:intron 35.0%
! AGATCAGAGATGAGATTTTG+TGG - chr6_1:12853920-12853939 None:intergenic 35.0%
CAGTCAAAATGAAGAAGAAG+GGG + chr6_1:12853961-12853980 Msa0875830:intron 35.0%
GTTAGATCTGTCAAAAAGTG+TGG + chr6_1:12854097-12854116 Msa0875830:intron 35.0%
TTTGACAACTATGGGTGAAT+AGG + chr6_1:12854592-12854611 Msa0875830:intron 35.0%
TCTGCATAGCATTGTTTCAA+CGG - chr6_1:12854727-12854746 None:intergenic 35.0%
!! AAGAGAATTTCTAGCCACTA+GGG - chr6_1:12854908-12854927 None:intergenic 35.0%
!! AAAGAGAATTTCTAGCCACT+AGG - chr6_1:12854909-12854928 None:intergenic 35.0%
GGTAGGGAAATAATATATGC+AGG - chr6_1:12854973-12854992 None:intergenic 35.0%
ATGGTTAAAGCAACTCTTGA+AGG - chr6_1:12855039-12855058 None:intergenic 35.0%
! TATGATGGAAGGTCATTTCT+TGG - chr6_1:12855129-12855148 None:intergenic 35.0%
TATTCTGATGTTTACTAGGC+TGG - chr6_1:12855155-12855174 None:intergenic 35.0%
AATAAATCACTGCATCCTAG+TGG + chr6_1:12855248-12855267 Msa0875830:intron 35.0%
CTTTCCATGAATAAACCACT+AGG - chr6_1:12855266-12855285 None:intergenic 35.0%
!! GACAACATTTTTCAGAGCTA+GGG - chr6_1:12855379-12855398 None:intergenic 35.0%
GATGTCACTAAATCTCTAAG+GGG - chr6_1:12855637-12855656 None:intergenic 35.0%
CAGATGTCACTAAATCTCTA+AGG - chr6_1:12855639-12855658 None:intergenic 35.0%
CAATCACAGAGAAGTTGTAT+AGG + chr6_1:12855736-12855755 Msa0875830:intron 35.0%
AAACACTTACCTCCAAGAAT+AGG - chr6_1:12855779-12855798 None:intergenic 35.0%
! AAAAGCATATTGCTGTTGCA+AGG - chr6_1:12855867-12855886 None:intergenic 35.0%
ATCTTCTTTCACTGTTAGGT+TGG - chr6_1:12855992-12856011 None:intergenic 35.0%
!! GTGATGAATTGATTCGATGT+CGG + chr6_1:12856019-12856038 Msa0875830:intron 35.0%
ATAGAATGCAGACTTATGTC+GGG + chr6_1:12856172-12856191 Msa0875830:intron 35.0%
CTTTATAAATGTTCCGTCTG+TGG + chr6_1:12856205-12856224 Msa0875830:intron 35.0%
CTTAACAGAATGAGAGAACT+AGG + chr6_1:12856257-12856276 Msa0875830:CDS 35.0%
! TTTTACCAAGATATCCTGGT+GGG - chr6_1:12856286-12856305 None:intergenic 35.0%
! ATTTTACCAAGATATCCTGG+TGG - chr6_1:12856287-12856306 None:intergenic 35.0%
TCACGAAAAAAAAACTTCGC+AGG - chr6_1:12856418-12856437 None:intergenic 35.0%
ACACTATTGGAATTCAGATG+AGG + chr6_1:12856835-12856854 Msa0875830:intron 35.0%
GTGAATATTGTTATGCCAGA+AGG - chr6_1:12856875-12856894 None:intergenic 35.0%
CAGATTCTTCAAAGCCAAAA+CGG + chr6_1:12856939-12856958 Msa0875830:CDS 35.0%
! TCAACACTCATTTTCCGTTT+TGG - chr6_1:12856956-12856975 None:intergenic 35.0%
GAAATATCAATAGCGATTGG+GGG - chr6_1:12857049-12857068 None:intergenic 35.0%
CATCAACATGATCAGAGAAT+AGG + chr6_1:12857115-12857134 Msa0875830:CDS 35.0%
! ATAGGCGATTTAAGCTTTGA+TGG + chr6_1:12857133-12857152 Msa0875830:CDS 35.0%
AATGTGATGAATTGTGTCCT+GGG - chr6_1:12857171-12857190 None:intergenic 35.0%
AAATGTGATGAATTGTGTCC+TGG - chr6_1:12857172-12857191 None:intergenic 35.0%
CCATTGAATTAGGAGAAACA+TGG - chr6_1:12857222-12857241 None:intergenic 35.0%
CCATGTTTCTCCTAATTCAA+TGG + chr6_1:12857219-12857238 Msa0875830:CDS 35.0%
ATGGAATGAAAAAGGCTTTG+GGG - chr6_1:12857287-12857306 None:intergenic 35.0%
GAATGGAATGAAAAAGGCTT+TGG - chr6_1:12857289-12857308 None:intergenic 35.0%
CATCTCAATTTAACGATAGG+TGG + chr6_1:12857431-12857450 Msa0875830:CDS 35.0%
AACAAGCCAATCATATTGGT+TGG + chr6_1:12857620-12857639 Msa0875830:three_prime_UTR 35.0%
TCACAACCAACCAATATGAT+TGG - chr6_1:12857629-12857648 None:intergenic 35.0%
GGTAAGTAAGCAATGAACAA+AGG - chr6_1:12857752-12857771 None:intergenic 35.0%
CCATTGTACAAGTAAATGAG+AGG - chr6_1:12857773-12857792 None:intergenic 35.0%
CCTCTCATTTACTTGTACAA+TGG + chr6_1:12857770-12857789 Msa0875830:three_prime_UTR 35.0%
TTGGAGAAGCGGAATTTGAA+GGG - chr6_1:12847829-12847848 None:intergenic 40.0%
TTTGGAGAAGCGGAATTTGA+AGG - chr6_1:12847830-12847849 None:intergenic 40.0%
AGAAAGAGAGAGGGAGAATT+TGG - chr6_1:12847848-12847867 None:intergenic 40.0%
GGGTTTGTGTGGAAATTGAT+AGG + chr6_1:12848163-12848182 Msa0875830:intron 40.0%
! ATGTTTGGTTCCACTTCTAG+AGG + chr6_1:12848307-12848326 Msa0875830:intron 40.0%
! TGTTTGGTTCCACTTCTAGA+GGG + chr6_1:12848308-12848327 Msa0875830:intron 40.0%
! AATTCTGATCCCTCTAGAAG+TGG - chr6_1:12848320-12848339 None:intergenic 40.0%
! AGGGCTTGTTTAGATATGGA+TGG + chr6_1:12848910-12848929 Msa0875830:intron 40.0%
AGGGTTTGTGTAGAAATGGA+TGG + chr6_1:12849045-12849064 Msa0875830:intron 40.0%
GGGTTTGTGTAGAAATGGAT+GGG + chr6_1:12849046-12849065 Msa0875830:intron 40.0%
GGTTTGTGTAGAAATGGATG+GGG + chr6_1:12849047-12849066 Msa0875830:intron 40.0%
GTGCATATGAATGAGGTTTC+TGG + chr6_1:12849080-12849099 Msa0875830:intron 40.0%
!! AATGAGGTTTCTGGTTCTGT+GGG + chr6_1:12849089-12849108 Msa0875830:intron 40.0%
ATGCTATCTTGGAGAGCTTA+TGG + chr6_1:12849268-12849287 Msa0875830:intron 40.0%
! TGGGGAAGAGCATATAAATG+AGG + chr6_1:12849501-12849520 Msa0875830:CDS 40.0%
AGAGTGTGATAATTCCTTGC+CGG + chr6_1:12849624-12849643 Msa0875830:CDS 40.0%
TGAACCTGTCAAGAAGGATT+TGG + chr6_1:12849663-12849682 Msa0875830:CDS 40.0%
ACTTCCAAATCCTTCTTGAC+AGG - chr6_1:12849670-12849689 None:intergenic 40.0%
TGTCAAGAAGGATTTGGAAG+TGG + chr6_1:12849669-12849688 Msa0875830:CDS 40.0%
GTCAAGAAGGATTTGGAAGT+GGG + chr6_1:12849670-12849689 Msa0875830:CDS 40.0%
!!! ACAGTTGTGGTTTTGGAAGA+GGG + chr6_1:12849709-12849728 Msa0875830:CDS 40.0%
AAGAATGAGGAGAGTTCCAA+TGG + chr6_1:12849775-12849794 Msa0875830:CDS 40.0%
!! TCCAATGGAAGCATTGCAAT+TGG + chr6_1:12849790-12849809 Msa0875830:CDS 40.0%
ACCAATTGCAATGCTTCCAT+TGG - chr6_1:12849794-12849813 None:intergenic 40.0%
AGCATTGCAATTGGTAGAAG+AGG + chr6_1:12849799-12849818 Msa0875830:CDS 40.0%
! AACCATTGGATTTTGCTCTG+TGG + chr6_1:12849899-12849918 Msa0875830:intron 40.0%
TTCCACAGAGCAAAATCCAA+TGG - chr6_1:12849904-12849923 None:intergenic 40.0%
! TTTCAGGTGTTAAAAGAGCC+CGG + chr6_1:12850295-12850314 Msa0875830:intron 40.0%
TGACATGAACTGAAGGTTGA+TGG - chr6_1:12850341-12850360 None:intergenic 40.0%
TAAGTCCCTAACAAGGTTTG+TGG + chr6_1:12850365-12850384 Msa0875830:intron 40.0%
CAATGCCACAAACCTTGTTA+GGG - chr6_1:12850373-12850392 None:intergenic 40.0%
GACATGTTTAGCATGCCATT+GGG - chr6_1:12850519-12850538 None:intergenic 40.0%
AGACATGTTTAGCATGCCAT+TGG - chr6_1:12850520-12850539 None:intergenic 40.0%
TCATGTCCAACACATATAGC+AGG - chr6_1:12850709-12850728 None:intergenic 40.0%
!!! GCATTTTGAGATTTCTAGGG+TGG + chr6_1:12850799-12850818 Msa0875830:intron 40.0%
CGACTACCAAAAAACGATTC+CGG - chr6_1:12850941-12850960 None:intergenic 40.0%
AGGAAGGAAAACGAACAGAA+TGG - chr6_1:12851011-12851030 None:intergenic 40.0%
! AACGCGTTTTTGTTGAAACC+GGG - chr6_1:12851066-12851085 None:intergenic 40.0%
CTTAGTTAGGTGTATCGGAA+AGG - chr6_1:12851225-12851244 None:intergenic 40.0%
! AGTAGAGTGCTATGAATTGG+GGG - chr6_1:12851306-12851325 None:intergenic 40.0%
! GAGTAGAGTGCTATGAATTG+GGG - chr6_1:12851307-12851326 None:intergenic 40.0%
! GAGAGTAGAGTGCTATGAAT+TGG - chr6_1:12851309-12851328 None:intergenic 40.0%
GTGTGTTTATTGTCTCCTCT+TGG + chr6_1:12851767-12851786 Msa0875830:intron 40.0%
GGCACAGAATTACCATCTAT+CGG - chr6_1:12851930-12851949 None:intergenic 40.0%
ATATGATCGCGGATATGCTT+TGG + chr6_1:12851953-12851972 Msa0875830:CDS 40.0%
TATGATCGCGGATATGCTTT+GGG + chr6_1:12851954-12851973 Msa0875830:CDS 40.0%
AAGCTCTGTTATCAATGTGG+TGG + chr6_1:12852195-12852214 Msa0875830:intron 40.0%
TCCATCTAACCAACATGTTG+TGG + chr6_1:12852632-12852651 Msa0875830:intron 40.0%
! TCCACAACATGTTGGTTAGA+TGG - chr6_1:12852636-12852655 None:intergenic 40.0%
ACTAAAGCAGGGAAGGATAT+AGG + chr6_1:12852720-12852739 Msa0875830:intron 40.0%
GTGTGGTTATATTGTAGCTG+TGG + chr6_1:12852753-12852772 Msa0875830:intron 40.0%
TGGTTATATTGTAGCTGTGG+TGG + chr6_1:12852756-12852775 Msa0875830:intron 40.0%
ATACTGTTTGCTTCCAACAC+AGG + chr6_1:12853041-12853060 Msa0875830:intron 40.0%
AAAGAACGAACAACCTGTGT+TGG - chr6_1:12853057-12853076 None:intergenic 40.0%
TGAACCGCAATTGAAACATC+GGG - chr6_1:12853136-12853155 None:intergenic 40.0%
!! ATGCTTTGAGAGAATGTCCA+AGG + chr6_1:12853163-12853182 Msa0875830:CDS 40.0%
!! AGAAGAATTCTGGTTCCGTT+GGG - chr6_1:12853235-12853254 None:intergenic 40.0%
!! AAGAAGAATTCTGGTTCCGT+TGG - chr6_1:12853236-12853255 None:intergenic 40.0%
GATTACGGGAAGAAGAATTC+TGG - chr6_1:12853245-12853264 None:intergenic 40.0%
GAATCCTGATAATACCGAGT+AGG - chr6_1:12853267-12853286 None:intergenic 40.0%
TGATTCCCTCCATTAGTTAG+GGG + chr6_1:12853579-12853598 Msa0875830:intron 40.0%
!! ACAAAAGTGCCCCTAACTAA+TGG - chr6_1:12853591-12853610 None:intergenic 40.0%
GGTGAATACTCTGTTGTCAA+TGG + chr6_1:12853718-12853737 Msa0875830:intron 40.0%
AGGCAAAAGTGGAACAAAAC+CGG + chr6_1:12853816-12853835 Msa0875830:intron 40.0%
TGATCAAGATGAAGACGATC+TGG + chr6_1:12854022-12854041 Msa0875830:intron 40.0%
GATCAAGATGAAGACGATCT+GGG + chr6_1:12854023-12854042 Msa0875830:intron 40.0%
ATCAAGATGAAGACGATCTG+GGG + chr6_1:12854024-12854043 Msa0875830:intron 40.0%
! AGATCTGTCAAAAAGTGTGG+CGG + chr6_1:12854100-12854119 Msa0875830:intron 40.0%
! TCTTGATTGGATTGGGTCAT+TGG + chr6_1:12854170-12854189 Msa0875830:intron 40.0%
! CTTGATTGGATTGGGTCATT+GGG + chr6_1:12854171-12854190 Msa0875830:intron 40.0%
GTTTCCGCTTTGACAACTAT+GGG + chr6_1:12854584-12854603 Msa0875830:intron 40.0%
TTCACCCATAGTTGTCAAAG+CGG - chr6_1:12854591-12854610 None:intergenic 40.0%
ATCTCCATTACGCAGAGATT+GGG - chr6_1:12854697-12854716 None:intergenic 40.0%
TATCTCCATTACGCAGAGAT+TGG - chr6_1:12854698-12854717 None:intergenic 40.0%
TGCAAATATACGAGATCAGC+AGG - chr6_1:12854776-12854795 None:intergenic 40.0%
AAATTGGTCAAGTACCCTAG+TGG + chr6_1:12854891-12854910 Msa0875830:intron 40.0%
AATAATATATGCAGGGGCCA+GGG - chr6_1:12854965-12854984 None:intergenic 40.0%
AAATAATATATGCAGGGGCC+AGG - chr6_1:12854966-12854985 None:intergenic 40.0%
TTACTAGGCTGGATCTATGA+TGG - chr6_1:12855144-12855163 None:intergenic 40.0%
GCATCCTAGTGGTTTATTCA+TGG + chr6_1:12855259-12855278 Msa0875830:intron 40.0%
TATCAAAGATCGGTGGCAAA+GGG - chr6_1:12855353-12855372 None:intergenic 40.0%
ATATCAAAGATCGGTGGCAA+AGG - chr6_1:12855354-12855373 None:intergenic 40.0%
!! GGACAACATTTTTCAGAGCT+AGG - chr6_1:12855380-12855399 None:intergenic 40.0%
!! GCTCTGAAAAATGTTGTCCT+TGG + chr6_1:12855381-12855400 Msa0875830:intron 40.0%
GAAAAATGTTGTCCTTGGTC+TGG + chr6_1:12855386-12855405 Msa0875830:intron 40.0%
GACATCTGTCAACTGATTGT+TGG + chr6_1:12855651-12855670 Msa0875830:intron 40.0%
!!! GCTCTAAAGGATTTTCTCTC+TGG + chr6_1:12855705-12855724 Msa0875830:intron 40.0%
! GGATTTTCTCTCTGGTAAAC+TGG + chr6_1:12855713-12855732 Msa0875830:intron 40.0%
TGCAAAACTCCTATTCTTGG+AGG + chr6_1:12855767-12855786 Msa0875830:intron 40.0%
TTCGCAAGACACAAGTAGTT+TGG + chr6_1:12855809-12855828 Msa0875830:intron 40.0%
TCGCAAGACACAAGTAGTTT+GGG + chr6_1:12855810-12855829 Msa0875830:intron 40.0%
TGTTGCAAGGTCAGATAAAG+AGG - chr6_1:12855854-12855873 None:intergenic 40.0%
GATTAAAGTAGTCCAGTGAC+AGG - chr6_1:12855962-12855981 None:intergenic 40.0%
TCTCTCATTCTGTTAAGCCA+CGG - chr6_1:12856254-12856273 None:intergenic 40.0%
! AAACTTCGCAGGCTTTATGA+AGG - chr6_1:12856407-12856426 None:intergenic 40.0%
TTGGAATTCAGATGAGGATG+AGG + chr6_1:12856841-12856860 Msa0875830:intron 40.0%
ATATTGTTATGCCAGAAGGC+TGG - chr6_1:12856871-12856890 None:intergenic 40.0%
AATATTCACTGATGAGGCCA+TGG + chr6_1:12856886-12856905 Msa0875830:CDS 40.0%
CAAGAGGATGGGGAAATTAT+CGG + chr6_1:12856914-12856933 Msa0875830:CDS 40.0%
!! GGAATAGGAGCATTTATTCC+TGG - chr6_1:12856983-12857002 None:intergenic 40.0%
AAATGCTCCTATTCCAGAGA+AGG + chr6_1:12856988-12857007 Msa0875830:CDS 40.0%
! CAACAGAGATCATCGAGTTT+TGG + chr6_1:12857082-12857101 Msa0875830:CDS 40.0%
TCTGATCATGTTGATGTCCT+CGG - chr6_1:12857111-12857130 None:intergenic 40.0%
! TTTCAACCTAGGTTTGGTAG+TGG + chr6_1:12857196-12857215 Msa0875830:CDS 40.0%
CTCCTAATTCAATGGCAGAT+TGG + chr6_1:12857227-12857246 Msa0875830:CDS 40.0%
CTCCAATCTGCCATTGAATT+AGG - chr6_1:12857232-12857251 None:intergenic 40.0%
!! TTCATTATTCAAGCACCGAG+AGG + chr6_1:12857311-12857330 Msa0875830:CDS 40.0%
! AGATACGGAAACTTTAGCTC+TGG + chr6_1:12857367-12857386 Msa0875830:CDS 40.0%
CAATTTAACGATAGGTGGTC+AGG + chr6_1:12857436-12857455 Msa0875830:CDS 40.0%
CTAATGGGACATGAATCACA+CGG + chr6_1:12857490-12857509 Msa0875830:three_prime_UTR 40.0%
TAATGGGACATGAATCACAC+GGG + chr6_1:12857491-12857510 Msa0875830:three_prime_UTR 40.0%
CTATAGCAGTCAAGATGTGA+AGG - chr6_1:12857692-12857711 None:intergenic 40.0%
TTGACTGCTATAGCCATTTC+TGG + chr6_1:12857699-12857718 Msa0875830:three_prime_UTR 40.0%
TGCTCAATCTCTCTACTCCA+GGG + chr6_1:12847769-12847788 Msa0875830:five_prime_UTR 45.0%
GAAGGGGTTAATTGAAACCC+TGG - chr6_1:12847789-12847808 None:intergenic 45.0%
GGAATTTGAAGGGTCGATGA+GGG - chr6_1:12847819-12847838 None:intergenic 45.0%
AGAGGGAGAATTTGGAGAAG+CGG - chr6_1:12847840-12847859 None:intergenic 45.0%
TGTAGAAATGGATGGGGAAC+AGG + chr6_1:12849053-12849072 Msa0875830:intron 45.0%
GTAGAAATGGATGGGGAACA+GGG + chr6_1:12849054-12849073 Msa0875830:intron 45.0%
TAGAAATGGATGGGGAACAG+GGG + chr6_1:12849055-12849074 Msa0875830:intron 45.0%
! AGGGGAAGTGCATATGAATG+AGG + chr6_1:12849073-12849092 Msa0875830:intron 45.0%
!! GAATGAGGTTTCTGGTTCTG+TGG + chr6_1:12849088-12849107 Msa0875830:intron 45.0%
TACAACACATTGGCCCTGTT+TGG + chr6_1:12849116-12849135 Msa0875830:intron 45.0%
!! AAAAGTGTCGAGAACTTGGG+AGG + chr6_1:12849547-12849566 Msa0875830:CDS 45.0%
TTTGGACGAGGAGAAAAAGC+CGG + chr6_1:12849579-12849598 Msa0875830:CDS 45.0%
! ACACTGTTCATTTTCCGGCA+AGG - chr6_1:12849641-12849660 None:intergenic 45.0%
! GTGTTCTGAACCTGTCAAGA+AGG + chr6_1:12849657-12849676 Msa0875830:CDS 45.0%
! GAAGGATTTGGAAGTGGGTT+TGG + chr6_1:12849675-12849694 Msa0875830:CDS 45.0%
! GACAGAGACAGTTGTGGTTT+TGG + chr6_1:12849702-12849721 Msa0875830:CDS 45.0%
!!! GACAGTTGTGGTTTTGGAAG+AGG + chr6_1:12849708-12849727 Msa0875830:CDS 45.0%
GCAATGCCACAAACCTTGTT+AGG - chr6_1:12850374-12850393 None:intergenic 45.0%
TACTACAGCAATGGTCCCAA+TGG + chr6_1:12850501-12850520 Msa0875830:CDS 45.0%
GCACTTAGAAAAAGGCAGCA+TGG - chr6_1:12850756-12850775 None:intergenic 45.0%
!!! AAGTGGCCGGAATCGTTTTT+TGG + chr6_1:12850932-12850951 Msa0875830:intron 45.0%
!!! GTTTTTTGGTAGTCGCAGCT+TGG + chr6_1:12850946-12850965 Msa0875830:intron 45.0%
AGTGCTATGAATTGGGGGAA+GGG - chr6_1:12851301-12851320 None:intergenic 45.0%
TGAATCGGGAGATCGTAACA+CGG - chr6_1:12851656-12851675 None:intergenic 45.0%
GAGTCACAAGATCGTGAATC+GGG - chr6_1:12851670-12851689 None:intergenic 45.0%
GGAGTCACAAGATCGTGAAT+CGG - chr6_1:12851671-12851690 None:intergenic 45.0%
TCTGTGCCTCTATATGATCG+CGG + chr6_1:12851942-12851961 Msa0875830:CDS 45.0%
GCATATCCGCGATCATATAG+AGG - chr6_1:12851951-12851970 None:intergenic 45.0%
TAGAGTCTGAGCAGGTATGT+TGG - chr6_1:12852146-12852165 None:intergenic 45.0%
!!! CTCTGCTCCAATTTTTGGGT+TGG - chr6_1:12852226-12852245 None:intergenic 45.0%
! CCTGCTCTGCTCCAATTTTT+GGG - chr6_1:12852230-12852249 None:intergenic 45.0%
! TCCTGCTCTGCTCCAATTTT+TGG - chr6_1:12852231-12852250 None:intergenic 45.0%
GTAACAGACTAAAGCAGGGA+AGG + chr6_1:12852713-12852732 Msa0875830:intron 45.0%
CCTTCCCGATGTTTCAATTG+CGG + chr6_1:12853129-12853148 Msa0875830:CDS 45.0%
TTGACAGCAACGTTATCACG+AGG - chr6_1:12853189-12853208 None:intergenic 45.0%
GCAGCAAACTCAAATCCCAA+CGG + chr6_1:12853217-12853236 Msa0875830:CDS 45.0%
CTTCTTCCCGTAATCCTACT+CGG + chr6_1:12853250-12853269 Msa0875830:CDS 45.0%
! TCTTCTGCTGGAAAGTATGC+TGG + chr6_1:12853285-12853304 Msa0875830:CDS 45.0%
!! CTGGAAAGTATGCTGGTTTG+AGG + chr6_1:12853292-12853311 Msa0875830:CDS 45.0%
AAGTGCCCCTAACTAATGGA+GGG - chr6_1:12853587-12853606 None:intergenic 45.0%
! AAAGTGCCCCTAACTAATGG+AGG - chr6_1:12853588-12853607 None:intergenic 45.0%
GGTCTTACATATAGGGACAG+AGG + chr6_1:12853680-12853699 Msa0875830:intron 45.0%
CATATAGGGACAGAGGTAGT+AGG + chr6_1:12853687-12853706 Msa0875830:intron 45.0%
CAGAGGTAGTAGGTGACAAT+AGG + chr6_1:12853697-12853716 Msa0875830:intron 45.0%
CTGTTGTCAATGGTCAAACG+CGG + chr6_1:12853728-12853747 Msa0875830:intron 45.0%
GGCAAAAGTGGAACAAAACC+GGG + chr6_1:12853817-12853836 Msa0875830:intron 45.0%
GATGAAGAGAGAGCAGAGAA+TGG - chr6_1:12854061-12854080 None:intergenic 45.0%
TGGGAGAGAGAAAGACAGTA+GGG + chr6_1:12854124-12854143 Msa0875830:intron 45.0%
AGAAAGACAGTAGGGGAACT+AGG + chr6_1:12854132-12854151 Msa0875830:intron 45.0%
GAAAGACAGTAGGGGAACTA+GGG + chr6_1:12854133-12854152 Msa0875830:intron 45.0%
TAGTTGTCAAAGCGGAAACG+CGG - chr6_1:12854583-12854602 None:intergenic 45.0%
CGTTTCCGCTTTGACAACTA+TGG + chr6_1:12854583-12854602 Msa0875830:intron 45.0%
ACGCAGAGATTGGGAAACTT+TGG - chr6_1:12854688-12854707 None:intergenic 45.0%
GTTTCCCAATCTCTGCGTAA+TGG + chr6_1:12854690-12854709 Msa0875830:intron 45.0%
CAATGCTATGCAGAACAGCA+AGG + chr6_1:12854733-12854752 Msa0875830:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG - chr6_1:12854989-12855008 None:intergenic 45.0%
ATGAGCTTAGCTCAGTTGGT+AGG - chr6_1:12854990-12855009 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCA+TGG + chr6_1:12854989-12855008 Msa0875830:intron 45.0%
ACCAACTGAGCTAAGCTCAT+GGG + chr6_1:12854990-12855009 Msa0875830:intron 45.0%
! TAGGCTGGATCTATGATGGA+AGG - chr6_1:12855140-12855159 None:intergenic 45.0%
GCTAGGGCGATATCAAAGAT+CGG - chr6_1:12855363-12855382 None:intergenic 45.0%
AATGTTGTCCTTGGTCTGGT+AGG + chr6_1:12855390-12855409 Msa0875830:intron 45.0%
TACTTGTGTCTTGCGAACTG+TGG - chr6_1:12855806-12855825 None:intergenic 45.0%
GAATTCAGATGAGGATGAGG+AGG + chr6_1:12856844-12856863 Msa0875830:intron 45.0%
AATCTTTCATCGGCCTTCTC+TGG - chr6_1:12857004-12857023 None:intergenic 45.0%
AGAAGGCCGATGAAAGATTG+TGG + chr6_1:12857005-12857024 Msa0875830:CDS 45.0%
GAAGGCCGATGAAAGATTGT+GGG + chr6_1:12857006-12857025 Msa0875830:CDS 45.0%
! TTAAGCTTTGATGGTCCTCC+AGG + chr6_1:12857142-12857161 Msa0875830:CDS 45.0%
! TAAGCTTTGATGGTCCTCCA+GGG + chr6_1:12857143-12857162 Msa0875830:CDS 45.0%
TCAATGGCAGATTGGAGTAG+TGG + chr6_1:12857235-12857254 Msa0875830:CDS 45.0%
CAATGGCAGATTGGAGTAGT+GGG + chr6_1:12857236-12857255 Msa0875830:CDS 45.0%
CAACGGTGAAAAATGCCTCT+CGG - chr6_1:12857329-12857348 None:intergenic 45.0%
!!! GAGAGGCATTTTTCACCGTT+GGG + chr6_1:12857328-12857347 Msa0875830:CDS 45.0%
CGAGATTCTGGTAGCAGATA+CGG + chr6_1:12857352-12857371 Msa0875830:CDS 45.0%
!! TACGGAAACTTTAGCTCTGG+AGG + chr6_1:12857370-12857389 Msa0875830:CDS 45.0%
GAGACCGTTACCATCATAGT+CGG + chr6_1:12857458-12857477 Msa0875830:CDS 45.0%
ACCTCCGACTATGATGGTAA+CGG - chr6_1:12857465-12857484 None:intergenic 45.0%
TAGTCGGAGGTGATGACTAA+TGG + chr6_1:12857474-12857493 Msa0875830:exon 45.0%
AGTCGGAGGTGATGACTAAT+GGG + chr6_1:12857475-12857494 Msa0875830:exon 45.0%
CGCTAATCTGAACTCACACA+TGG - chr6_1:12857518-12857537 None:intergenic 45.0%
!! TATTATTATTATTATGTTTA+TGG - chr6_1:12851422-12851441 None:intergenic 5.0%
!! AAACATAATAATAATAATAA+TGG + chr6_1:12851423-12851442 Msa0875830:intron 5.0%
CTGCTCAATCTCTCTACTCC+AGG + chr6_1:12847768-12847787 Msa0875830:five_prime_UTR 50.0%
TTTGAAGGGTCGATGAGGGA+GGG - chr6_1:12847815-12847834 None:intergenic 50.0%
ATTTGAAGGGTCGATGAGGG+AGG - chr6_1:12847816-12847835 None:intergenic 50.0%
CGGAATTTGAAGGGTCGATG+AGG - chr6_1:12847820-12847839 None:intergenic 50.0%
CACACACATATGGGCCTGTT+TGG - chr6_1:12849366-12849385 None:intergenic 50.0%
CTTGGGAGGAAGTGATCCTT+TGG + chr6_1:12849561-12849580 Msa0875830:CDS 50.0%
AGGAAGTGATCCTTTGGACG+AGG + chr6_1:12849567-12849586 Msa0875830:CDS 50.0%
!! GGCTTTTTCTCCTCGTCCAA+AGG - chr6_1:12849580-12849599 None:intergenic 50.0%
GAGGAGAAAAAGCCGGAAGA+TGG + chr6_1:12849586-12849605 Msa0875830:CDS 50.0%
! GGATTTGGAAGTGGGTTTGG+AGG + chr6_1:12849678-12849697 Msa0875830:CDS 50.0%
TTCTGCTCAGGATCCTAGTG+AGG + chr6_1:12850654-12850673 Msa0875830:intron 50.0%
TCAGGATCCTAGTGAGGTGT+TGG + chr6_1:12850660-12850679 Msa0875830:intron 50.0%
CCAGATTCCAACACCTCACT+AGG - chr6_1:12850670-12850689 None:intergenic 50.0%
!! CCTAGTGAGGTGTTGGAATC+TGG + chr6_1:12850667-12850686 Msa0875830:CDS 50.0%
!! TGAGGTGTTGGAATCTGGTG+AGG + chr6_1:12850672-12850691 Msa0875830:CDS 50.0%
AAACTCGCGATCCAACTCGT+AGG + chr6_1:12850867-12850886 Msa0875830:intron 50.0%
ACTCGTACGATCCTACGAGT+TGG - chr6_1:12850881-12850900 None:intergenic 50.0%
AGGGTCCGAAACTTCAAGGA+AGG - chr6_1:12851027-12851046 None:intergenic 50.0%
TCCTTGAAGTTTCGGACCCT+CGG + chr6_1:12851027-12851046 Msa0875830:intron 50.0%
! ATGAATTGGGGGAAGGGCAT+TGG - chr6_1:12851295-12851314 None:intergenic 50.0%
GAGTGCTATGAATTGGGGGA+AGG - chr6_1:12851302-12851321 None:intergenic 50.0%
TCGAGATCCTACGCAAGATC+GGG - chr6_1:12851696-12851715 None:intergenic 50.0%
CTCGAGATCCTACGCAAGAT+CGG - chr6_1:12851697-12851716 None:intergenic 50.0%
! CTGTTATCAATGTGGTGGCG+TGG + chr6_1:12852200-12852219 Msa0875830:intron 50.0%
CCCAAAAATTGGAGCAGAGC+AGG + chr6_1:12852227-12852246 Msa0875830:intron 50.0%
AAATTGGAGCAGAGCAGGAG+CGG + chr6_1:12852232-12852251 Msa0875830:intron 50.0%
GGAGCGGGCGCTATATATTA+AGG + chr6_1:12852248-12852267 Msa0875830:intron 50.0%
CCGCAATTGAAACATCGGGA+AGG - chr6_1:12853132-12853151 None:intergenic 50.0%
!! AAGTATGCTGGTTTGAGGCC+AGG + chr6_1:12853297-12853316 Msa0875830:CDS 50.0%
!! GTTGCATCATCAAGAGCACC+TGG - chr6_1:12853318-12853337 None:intergenic 50.0%
TGATGCAACTCGTCAGCTCT+TGG + chr6_1:12853329-12853348 Msa0875830:CDS 50.0%
GATGCAACTCGTCAGCTCTT+GGG + chr6_1:12853330-12853349 Msa0875830:CDS 50.0%
TGGAACAAAACCGGGTTTCG+TGG + chr6_1:12853825-12853844 Msa0875830:intron 50.0%
! TGTCAAAAAGTGTGGCGGCT+GGG + chr6_1:12854105-12854124 Msa0875830:intron 50.0%
CTGGGAGAGAGAAAGACAGT+AGG + chr6_1:12854123-12854142 Msa0875830:intron 50.0%
GGGAGAGAGAAAGACAGTAG+GGG + chr6_1:12854125-12854144 Msa0875830:intron 50.0%
! TTGGATTGGGTCATTGGGCT+AGG + chr6_1:12854176-12854195 Msa0875830:intron 50.0%
! TACCGCGCTGCGTCAATTTT+TGG + chr6_1:12854542-12854561 Msa0875830:intron 50.0%
! ACCGCGCTGCGTCAATTTTT+GGG + chr6_1:12854543-12854562 Msa0875830:intron 50.0%
! AGGAGAATAAGTGGGGTGTC+CGG + chr6_1:12854932-12854951 Msa0875830:intron 50.0%
CCAACTGAGCTAAGCTCATG+GGG + chr6_1:12854991-12855010 Msa0875830:intron 50.0%
AGGGCGATATCAAAGATCGG+TGG - chr6_1:12855360-12855379 None:intergenic 50.0%
ACTATGCTCCTACCAGACCA+AGG - chr6_1:12855401-12855420 None:intergenic 50.0%
! GCTTGTTACCCATGAACTCG+TGG + chr6_1:12855610-12855629 Msa0875830:intron 50.0%
TAAGGGGACCACGAGTTCAT+GGG - chr6_1:12855621-12855640 None:intergenic 50.0%
GATTTGGCAGGTGATGCAAG+TGG - chr6_1:12855935-12855954 None:intergenic 50.0%
TCCAGTGACAGGCACAGATT+TGG - chr6_1:12855951-12855970 None:intergenic 50.0%
TGTTCCGTCTGTGGTTATGC+AGG + chr6_1:12856214-12856233 Msa0875830:intron 50.0%
AGCTCCTGCATAACCACAGA+CGG - chr6_1:12856221-12856240 None:intergenic 50.0%
TTCTGTTAAGCCACGGAGGT+GGG - chr6_1:12856247-12856266 None:intergenic 50.0%
ATTCTGTTAAGCCACGGAGG+TGG - chr6_1:12856248-12856267 None:intergenic 50.0%
CTCATTCTGTTAAGCCACGG+AGG - chr6_1:12856251-12856270 None:intergenic 50.0%
AGAGAACTAGGATACCCACC+AGG + chr6_1:12856269-12856288 Msa0875830:CDS 50.0%
GGATACCCACCAGGATATCT+TGG + chr6_1:12856278-12856297 Msa0875830:CDS 50.0%
CCATGGCAGAACAAGAGGAT+GGG + chr6_1:12856903-12856922 Msa0875830:CDS 50.0%
CATGGCAGAACAAGAGGATG+GGG + chr6_1:12856904-12856923 Msa0875830:CDS 50.0%
!! TCATCGGCCTTCTCTGGAAT+AGG - chr6_1:12856998-12857017 None:intergenic 50.0%
GGCAGCCCACAATCTTTCAT+CGG - chr6_1:12857014-12857033 None:intergenic 50.0%
! ATGAAAGATTGTGGGCTGCC+AGG + chr6_1:12857014-12857033 Msa0875830:CDS 50.0%
! TGAAAGATTGTGGGCTGCCA+GGG + chr6_1:12857015-12857034 Msa0875830:CDS 50.0%
!! TCATCGAGTTTTGGTAGCCG+AGG + chr6_1:12857091-12857110 Msa0875830:CDS 50.0%
! AAGCTTTGATGGTCCTCCAG+GGG + chr6_1:12857144-12857163 Msa0875830:CDS 50.0%
ACATGGCCACTACCAAACCT+AGG - chr6_1:12857205-12857224 None:intergenic 50.0%
TGGGAGAAGTCCTATGCATG+AGG + chr6_1:12857255-12857274 Msa0875830:CDS 50.0%
!!! CGAGAGGCATTTTTCACCGT+TGG + chr6_1:12857327-12857346 Msa0875830:CDS 50.0%
CTACCAGAATCTCGTCCCAA+CGG - chr6_1:12857346-12857365 None:intergenic 50.0%
ACCGTTACCATCATAGTCGG+AGG + chr6_1:12857461-12857480 Msa0875830:CDS 50.0%
GTCATCACCTCCGACTATGA+TGG - chr6_1:12857471-12857490 None:intergenic 50.0%
GGAGGTGACAGAGACAGTTG+TGG + chr6_1:12849696-12849715 Msa0875830:CDS 55.0%
GGCAGCATGGATACTCACCA+CGG - chr6_1:12850743-12850762 None:intergenic 55.0%
CTTGCAACCCATGACCGTGT+CGG + chr6_1:12850908-12850927 Msa0875830:intron 55.0%
CCACTTTCCGACACGGTCAT+GGG - chr6_1:12850918-12850937 None:intergenic 55.0%
! ATTCCGGCCACTTTCCGACA+CGG - chr6_1:12850925-12850944 None:intergenic 55.0%
ACCGTACCCACGATCTTCCA+CGG - chr6_1:12850976-12850995 None:intergenic 55.0%
CCTTGAAGTTTCGGACCCTC+GGG + chr6_1:12851028-12851047 Msa0875830:intron 55.0%
!! TTGGGGGAAGGGCATTGGTA+AGG - chr6_1:12851290-12851309 None:intergenic 55.0%
CGAGATCCTACGCAAGATCG+GGG - chr6_1:12851695-12851714 None:intergenic 55.0%
GCACATGCTAGAGTCTGAGC+AGG - chr6_1:12852154-12852173 None:intergenic 55.0%
GGCGTGGCCAACCCAAAAAT+TGG + chr6_1:12852216-12852235 Msa0875830:intron 55.0%
AATTGGAGCAGAGCAGGAGC+GGG + chr6_1:12852233-12852252 Msa0875830:intron 55.0%
GCAACGTTATCACGAGGCCT+TGG - chr6_1:12853183-12853202 None:intergenic 55.0%
AACTCGTCAGCTCTTGGGCT+TGG + chr6_1:12853335-12853354 Msa0875830:CDS 55.0%
ACTCGTCAGCTCTTGGGCTT+GGG + chr6_1:12853336-12853355 Msa0875830:CDS 55.0%
! CTTTTGCCTAACGCGCGACT+CGG - chr6_1:12853805-12853824 None:intergenic 55.0%
AGTCGCGCGTTAGGCAAAAG+TGG + chr6_1:12853805-12853824 Msa0875830:intron 55.0%
TGAAAAGCGGCCACGAAACC+CGG - chr6_1:12853838-12853857 None:intergenic 55.0%
!!! GGTTTCGTGGCCGCTTTTCA+TGG + chr6_1:12853838-12853857 Msa0875830:intron 55.0%
!!! TGGCCGCTTTTCATGGAGCA+AGG + chr6_1:12853845-12853864 Msa0875830:intron 55.0%
CCGCCTTGCTCCATGAAAAG+CGG - chr6_1:12853851-12853870 None:intergenic 55.0%
!! CCGCTTTTCATGGAGCAAGG+CGG + chr6_1:12853848-12853867 Msa0875830:intron 55.0%
GGCCAAAAAGCGGGTCAACA+CGG + chr6_1:12853869-12853888 Msa0875830:intron 55.0%
GCCAAAAAGCGGGTCAACAC+GGG + chr6_1:12853870-12853889 Msa0875830:intron 55.0%
!! ACCCGTGTTGACCCGCTTTT+TGG - chr6_1:12853874-12853893 None:intergenic 55.0%
! CTGTCAAAAAGTGTGGCGGC+TGG + chr6_1:12854104-12854123 Msa0875830:intron 55.0%
AATTGACGCAGCGCGGTAAG+CGG - chr6_1:12854540-12854559 None:intergenic 55.0%
CCCCAAAAATTGACGCAGCG+CGG - chr6_1:12854547-12854566 None:intergenic 55.0%
! CCGCGCTGCGTCAATTTTTG+GGG + chr6_1:12854544-12854563 Msa0875830:intron 55.0%
!! CGCTGCGTCAATTTTTGGGG+TGG + chr6_1:12854547-12854566 Msa0875830:intron 55.0%
! GGAGAATAAGTGGGGTGTCC+GGG + chr6_1:12854933-12854952 Msa0875830:intron 55.0%
CCCCATGAGCTTAGCTCAGT+TGG - chr6_1:12854994-12855013 None:intergenic 55.0%
CTAAGGGGACCACGAGTTCA+TGG - chr6_1:12855622-12855641 None:intergenic 55.0%
GTGACAGGCACAGATTTGGC+AGG - chr6_1:12855947-12855966 None:intergenic 55.0%
GCCAAATCTGTGCCTGTCAC+TGG + chr6_1:12855947-12855966 Msa0875830:intron 55.0%
TGAGGCCATGGCAGAACAAG+AGG + chr6_1:12856898-12856917 Msa0875830:CDS 55.0%
GCCATGGCAGAACAAGAGGA+TGG + chr6_1:12856902-12856921 Msa0875830:CDS 55.0%
CCCATCCTCTTGTTCTGCCA+TGG - chr6_1:12856906-12856925 None:intergenic 55.0%
GGGGACACTTCCTCATGCAT+AGG - chr6_1:12857268-12857287 None:intergenic 55.0%
TCACCGTTGGGACGAGATTC+TGG + chr6_1:12857340-12857359 Msa0875830:CDS 55.0%
TCGATGAGGGAGGGAGGGAA+GGG - chr6_1:12847806-12847825 None:intergenic 60.0%
AAGGGTCGATGAGGGAGGGA+GGG - chr6_1:12847811-12847830 None:intergenic 60.0%
CCCATGACCGTGTCGGAAAG+TGG + chr6_1:12850915-12850934 Msa0875830:intron 60.0%
! GCCACTTTCCGACACGGTCA+TGG - chr6_1:12850919-12850938 None:intergenic 60.0%
TGACCGTGTCGGAAAGTGGC+CGG + chr6_1:12850919-12850938 Msa0875830:intron 60.0%
TGGATCGCCGTGGAAGATCG+TGG + chr6_1:12850966-12850985 Msa0875830:intron 60.0%
GGATCGCCGTGGAAGATCGT+GGG + chr6_1:12850967-12850986 Msa0875830:intron 60.0%
GCCGTGGAAGATCGTGGGTA+CGG + chr6_1:12850972-12850991 Msa0875830:intron 60.0%
GTGGAAGATCGTGGGTACGG+TGG + chr6_1:12850975-12850994 Msa0875830:intron 60.0%
CCCGAGGGTCCGAAACTTCA+AGG - chr6_1:12851031-12851050 None:intergenic 60.0%
GAAGTTTCGGACCCTCGGGT+CGG + chr6_1:12851032-12851051 Msa0875830:intron 60.0%
AAGTTTCGGACCCTCGGGTC+GGG + chr6_1:12851033-12851052 Msa0875830:intron 60.0%
ACTCCTCCCCGATCTTGCGT+AGG + chr6_1:12851686-12851705 Msa0875830:intron 60.0%
GATCCTACGCAAGATCGGGG+AGG - chr6_1:12851692-12851711 None:intergenic 60.0%
CTCGTCAGCTCTTGGGCTTG+GGG + chr6_1:12853337-12853356 Msa0875830:CDS 60.0%
TCGTCAGCTCTTGGGCTTGG+GGG + chr6_1:12853338-12853357 Msa0875830:CDS 60.0%
GGAGCAAGGCGGCCAAAAAG+CGG + chr6_1:12853859-12853878 Msa0875830:intron 60.0%
GAGCAAGGCGGCCAAAAAGC+GGG + chr6_1:12853860-12853879 Msa0875830:intron 60.0%
GCGGGCGCTATTACATGACG+CGG - chr6_1:12854510-12854529 None:intergenic 60.0%
ATTGACGCAGCGCGGTAAGC+GGG - chr6_1:12854539-12854558 None:intergenic 60.0%
GATGAGGAGGACCAGCCTTC+TGG + chr6_1:12856857-12856876 Msa0875830:CDS 60.0%
!! GATTGGGGGTACTACAGCCC+TGG - chr6_1:12857035-12857054 None:intergenic 60.0%
GAATTGTGTCCTGGGTCCCC+TGG - chr6_1:12857163-12857182 None:intergenic 60.0%
CGATGAGGGAGGGAGGGAAG+GGG - chr6_1:12847805-12847824 None:intergenic 65.0%
GTCGATGAGGGAGGGAGGGA+AGG - chr6_1:12847807-12847826 None:intergenic 65.0%
GAAGGGTCGATGAGGGAGGG+AGG - chr6_1:12847812-12847831 None:intergenic 65.0%
AGTCGCAGCTTGGATCGCCG+TGG + chr6_1:12850956-12850975 Msa0875830:intron 65.0%
GGTCAAACGCGGCGCGATTG+TGG + chr6_1:12853739-12853758 Msa0875830:intron 65.0%
GTCAAAGCGGAAACGCGGCG+CGG - chr6_1:12854578-12854597 None:intergenic 65.0%
AGGAGCTTGACCCACCTCCG+TGG + chr6_1:12856234-12856253 Msa0875830:intron 65.0%
TTGTGTCCTGGGTCCCCTGG+AGG - chr6_1:12857160-12857179 None:intergenic 65.0%
AACGCGGCGCGATTGTGGCG+CGG + chr6_1:12853744-12853763 Msa0875830:intron 70.0%
CGGTCGCGTTCTGACGCGCT+AGG - chr6_1:12853785-12853804 None:intergenic 70.0%
ACGCGACCGAGTCGCGCGTT+AGG + chr6_1:12853796-12853815 Msa0875830:intron 70.0%
GGGTGTCCGGGTTCGAACCC+TGG + chr6_1:12854945-12854964 Msa0875830:intron 70.0%
CAGGGGCCAGGGTTCGAACC+CGG - chr6_1:12854954-12854973 None:intergenic 70.0%
GATGGTCCTCCAGGGGACCC+AGG + chr6_1:12857151-12857170 Msa0875830:CDS 70.0%
GGCGCGATTGTGGCGCGGAG+CGG + chr6_1:12853749-12853768 Msa0875830:intron 75.0%
! GGGTCGCGCACCCGACCCGA+GGG - chr6_1:12851046-12851065 None:intergenic 80.0%
! CTCGGGTCGGGTGCGCGACC+CGG + chr6_1:12851045-12851064 Msa0875830:intron 80.0%
! GCGGTAAGCGGGCGCGACGC+GGG - chr6_1:12854528-12854547 None:intergenic 80.0%
! CGCGGTAAGCGGGCGCGACG+CGG - chr6_1:12854529-12854548 None:intergenic 80.0%
! AGCGGAAACGCGGCGCGGCG+CGG - chr6_1:12854573-12854592 None:intergenic 80.0%
! CGGGTCGCGCACCCGACCCG+AGG - chr6_1:12851047-12851066 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 12847727 12857864 12847727 ID=Msa0875830;Name=Msa0875830
chr6_1 mRNA 12847727 12857864 12847727 ID=Msa0875830-mRNA-1;Parent=Msa0875830;Name=Msa0875830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=157|1|1|1|0.87|0.77|9|378|549
chr6_1 exon 12847727 12847870 12847727 ID=Msa0875830-mRNA-1:exon:3752;Parent=Msa0875830-mRNA-1
chr6_1 exon 12849483 12849820 12849483 ID=Msa0875830-mRNA-1:exon:3753;Parent=Msa0875830-mRNA-1
chr6_1 exon 12850301 12850379 12850301 ID=Msa0875830-mRNA-1:exon:3754;Parent=Msa0875830-mRNA-1
chr6_1 exon 12850475 12850550 12850475 ID=Msa0875830-mRNA-1:exon:3755;Parent=Msa0875830-mRNA-1
chr6_1 exon 12850664 12850744 12850664 ID=Msa0875830-mRNA-1:exon:3756;Parent=Msa0875830-mRNA-1
chr6_1 exon 12851876 12852012 12851876 ID=Msa0875830-mRNA-1:exon:3757;Parent=Msa0875830-mRNA-1
chr6_1 exon 12853107 12853359 12853107 ID=Msa0875830-mRNA-1:exon:3758;Parent=Msa0875830-mRNA-1
chr6_1 exon 12856236 12856299 12856236 ID=Msa0875830-mRNA-1:exon:3759;Parent=Msa0875830-mRNA-1
chr6_1 exon 12856852 12857864 12856852 ID=Msa0875830-mRNA-1:exon:3760;Parent=Msa0875830-mRNA-1
chr6_1 five_prime_UTR 12847727 12847870 12847727 ID=Msa0875830-mRNA-1:five_prime_utr;Parent=Msa0875830-mRNA-1
chr6_1 five_prime_UTR 12849483 12849495 12849483 ID=Msa0875830-mRNA-1:five_prime_utr;Parent=Msa0875830-mRNA-1
chr6_1 CDS 12849496 12849820 12849496 ID=Msa0875830-mRNA-1:cds;Parent=Msa0875830-mRNA-1
chr6_1 CDS 12850301 12850379 12850301 ID=Msa0875830-mRNA-1:cds;Parent=Msa0875830-mRNA-1
chr6_1 CDS 12850475 12850550 12850475 ID=Msa0875830-mRNA-1:cds;Parent=Msa0875830-mRNA-1
chr6_1 CDS 12850664 12850744 12850664 ID=Msa0875830-mRNA-1:cds;Parent=Msa0875830-mRNA-1
chr6_1 CDS 12851876 12852012 12851876 ID=Msa0875830-mRNA-1:cds;Parent=Msa0875830-mRNA-1
chr6_1 CDS 12853107 12853359 12853107 ID=Msa0875830-mRNA-1:cds;Parent=Msa0875830-mRNA-1
chr6_1 CDS 12856236 12856299 12856236 ID=Msa0875830-mRNA-1:cds;Parent=Msa0875830-mRNA-1
chr6_1 CDS 12856852 12857486 12856852 ID=Msa0875830-mRNA-1:cds;Parent=Msa0875830-mRNA-1
chr6_1 three_prime_UTR 12857487 12857864 12857487 ID=Msa0875830-mRNA-1:three_prime_utr;Parent=Msa0875830-mRNA-1
Gene Sequence

>Msa0875830

ATGGATGGGGAAGAGCATATAAATGAGGCTCCTCTTTCTGAAGCTGAAAACAAAAGTGTCGAGAACTTGGGAGGAAGTGATCCTTTGGACGAGGAGAAAAAGCCGGAAGATGGAAAGTCAGAAAATGAAGAGTGTGATAATTCCTTGCCGGAAAATGAACAGTGTTCTGAACCTGTCAAGAAGGATTTGGAAGTGGGTTTGGAGGTGACAGAGACAGTTGTGGTTTTGGAAGAGGGTGTGAGAGAAACAGTGCATGCTGAGAATGTTAGTGTTTCTCTCAAGAATGAGGAGAGTTCCAATGGAAGCATTGCAATTGGTAGAAGAGGTGTTAAAAGAGCCCGGATTACTGTTGATGATGATGACCATCAACCTTCAGTTCATGTCAGTTATAAGTCCCTAACAAGAGCTAGTAAAAATAAGCTTCAGGAATTACTACAGCAATGGTCCCAATGGCATGCTAAACATGTCTCCTCATCAAATGATCCTAGTGAGGTGTTGGAATCTGGTGAGGAGACGTTTTTTCCTGCTATATGTGTTGGACATGAATCAAAATCTTCCGTGTCGTTCTGGATGGAGAACCAGTCAATGAATGATAGAAACAAAGATGTTAGTCCGATAGATGGTAATTCTGTGCCTCTATATGATCGCGGATATGCTTTGGGATTGACTTCAGCTGATGACTCAAATAATGTGGATGATGGTCTGAAAATCATAGATACACCTTCCCGATGTTTCAATTGCGGTTCATACAGTCATGCTTTGAGAGAATGTCCAAGGCCTCGTGATAACGTTGCTGTCAATAATGCTCGCAGCAAACTCAAATCCCAACGGAACCAGAATTCTTCTTCCCGTAATCCTACTCGGTATTATCAGGATTCTTCTGCTGGAAAGTATGCTGGTTTGAGGCCAGGTGCTCTTGATGATGCAACTCGTCAGCTCTTGGGCTTGGGGGAGCTTGACCCACCTCCGTGGCTTAACAGAATGAGAGAACTAGGATACCCACCAGGATATCTTGATGAGGATGAGGAGGACCAGCCTTCTGGCATAACAATATTCACTGATGAGGCCATGGCAGAACAAGAGGATGGGGAAATTATCGGAGCAGATTCTTCAAAGCCAAAACGGAAAATGAGTGTTGAATTTCCAGGAATAAATGCTCCTATTCCAGAGAAGGCCGATGAAAGATTGTGGGCTGCCAGGGCTGTAGTACCCCCAATCGCTATTGATATTTCAAGGAACTGGTCACAACAGAGATCATCGAGTTTTGGTAGCCGAGGACATCAACATGATCAGAGAATAGGCGATTTAAGCTTTGATGGTCCTCCAGGGGACCCAGGACACAATTCATCACATTTTAGTTTTCAACCTAGGTTTGGTAGTGGCCATGTTTCTCCTAATTCAATGGCAGATTGGAGTAGTGGGAGAAGTCCTATGCATGAGGAAGTGTCCCCAAAGCCTTTTTCATTCCATTCTCTTCATTATTCAAGCACCGAGAGGCATTTTTCACCGTTGGGACGAGATTCTGGTAGCAGATACGGAAACTTTAGCTCTGGAGGCATGTATGATAGAGACAGAGATAGAGACCGAGATCTTTCATCTCAATTTAACGATAGGTGGTCAGGAGACCGTTACCATCATAGTCGGAGGTGA
Protein sequence

>Msa0875830

MDGEEHINEAPLSEAENKSVENLGGSDPLDEEKKPEDGKSENEECDNSLPENEQCSEPVKKDLEVGLEVTETVVVLEEGVRETVHAENVSVSLKNEESSNGSIAIGRRGVKRARITVDDDDHQPSVHVSYKSLTRASKNKLQELLQQWSQWHAKHVSSSNDPSEVLESGEETFFPAICVGHESKSSVSFWMENQSMNDRNKDVSPIDGNSVPLYDRGYALGLTSADDSNNVDDGLKIIDTPSRCFNCGSYSHALRECPRPRDNVAVNNARSKLKSQRNQNSSSRNPTRYYQDSSAGKYAGLRPGALDDATRQLLGLGELDPPPWLNRMRELGYPPGYLDEDEEDQPSGITIFTDEAMAEQEDGEIIGADSSKPKRKMSVEFPGINAPIPEKADERLWAARAVVPPIAIDISRNWSQQRSSSFGSRGHQHDQRIGDLSFDGPPGDPGHNSSHFSFQPRFGSGHVSPNSMADWSSGRSPMHEEVSPKPFSFHSLHYSSTERHFSPLGRDSGSRYGNFSSGGMYDRDRDRDRDLSSQFNDRWSGDRYHHSRR*