Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0888000 | XP_013442632.1 | 91.975 | 324 | 9 | 1 | 1 | 324 | 1 | 307 | 0.0 | 606 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0888000 | sp|Q8H0W3|RVE6_ARATH | 54.857 | 350 | 98 | 8 | 1 | 313 | 1 | 327 | 5.15e-112 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0888000 | A0A072TH00 | 91.975 | 324 | 9 | 1 | 1 | 324 | 1 | 307 | 0.0 | 606 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0888000 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0888000 | Msa0914330 | 0.932055 | 1.511003e-94 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0888000 | MtrunA17_Chr6g0469431 | 97.797 | 227 | 5 | 0 | 1 | 227 | 1 | 227 | 1.41e-166 | 462 |
| Msa0888000 | MtrunA17_Chr8g0348391 | 55.692 | 325 | 121 | 7 | 1 | 310 | 1 | 317 | 1.10e-108 | 320 |
| Msa0888000 | MtrunA17_Chr1g0181771 | 49.320 | 294 | 121 | 6 | 32 | 321 | 28 | 297 | 5.53e-83 | 253 |
| Msa0888000 | MtrunA17_Chr6g0469441 | 79.167 | 72 | 15 | 0 | 220 | 291 | 8 | 79 | 3.44e-34 | 120 |
| Msa0888000 | MtrunA17_Chr7g0276421 | 53.509 | 114 | 43 | 2 | 28 | 131 | 4 | 117 | 4.82e-25 | 105 |
| Msa0888000 | MtrunA17_Chr6g0481061 | 49.565 | 115 | 47 | 4 | 39 | 144 | 46 | 158 | 8.08e-25 | 104 |
| Msa0888000 | MtrunA17_Chr5g0433851 | 57.732 | 97 | 33 | 2 | 35 | 123 | 28 | 124 | 5.82e-23 | 98.6 |
| Msa0888000 | MtrunA17_Chr3g0109791 | 53.922 | 102 | 39 | 1 | 30 | 123 | 37 | 138 | 6.16e-23 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0888000 | AT5G52660.2 | 54.857 | 350 | 98 | 8 | 1 | 313 | 1 | 327 | 5.23e-113 | 331 |
| Msa0888000 | AT5G52660.1 | 55.014 | 349 | 98 | 8 | 1 | 313 | 1 | 326 | 1.32e-112 | 330 |
| Msa0888000 | AT4G01280.1 | 53.106 | 322 | 105 | 10 | 1 | 300 | 1 | 298 | 8.46e-98 | 291 |
| Msa0888000 | AT4G01280.2 | 52.941 | 323 | 105 | 10 | 1 | 300 | 1 | 299 | 1.40e-97 | 290 |
| Msa0888000 | AT1G01520.1 | 49.196 | 311 | 112 | 6 | 7 | 300 | 5 | 286 | 1.19e-91 | 275 |
| Msa0888000 | AT1G01520.3 | 49.834 | 301 | 105 | 6 | 7 | 290 | 5 | 276 | 7.80e-89 | 268 |
| Msa0888000 | AT3G09600.1 | 50.347 | 288 | 121 | 3 | 15 | 299 | 8 | 276 | 4.58e-86 | 261 |
| Msa0888000 | AT3G09600.7 | 50.347 | 288 | 121 | 3 | 15 | 299 | 8 | 276 | 4.58e-86 | 261 |
| Msa0888000 | AT3G09600.2 | 51.079 | 278 | 114 | 3 | 15 | 289 | 8 | 266 | 5.70e-84 | 255 |
| Msa0888000 | AT3G09600.6 | 51.079 | 278 | 114 | 3 | 15 | 289 | 8 | 266 | 5.70e-84 | 255 |
| Msa0888000 | AT3G09600.4 | 51.079 | 278 | 114 | 3 | 15 | 289 | 8 | 266 | 6.43e-84 | 255 |
| Msa0888000 | AT5G02840.3 | 51.128 | 266 | 116 | 4 | 33 | 297 | 31 | 283 | 8.78e-81 | 247 |
| Msa0888000 | AT5G02840.1 | 52.713 | 258 | 108 | 4 | 33 | 289 | 31 | 275 | 1.86e-80 | 246 |
| Msa0888000 | AT5G02840.2 | 52.713 | 258 | 108 | 4 | 33 | 289 | 31 | 275 | 1.86e-80 | 246 |
| Msa0888000 | AT1G01520.2 | 48.410 | 283 | 100 | 6 | 7 | 272 | 5 | 258 | 7.32e-78 | 239 |
| Msa0888000 | AT1G01520.4 | 48.410 | 283 | 100 | 6 | 7 | 272 | 5 | 258 | 7.32e-78 | 239 |
| Msa0888000 | AT5G02840.4 | 51.037 | 241 | 104 | 4 | 33 | 272 | 31 | 258 | 2.98e-69 | 217 |
| Msa0888000 | AT5G02840.5 | 50.622 | 241 | 105 | 4 | 33 | 272 | 31 | 258 | 9.18e-69 | 216 |
| Msa0888000 | AT3G09600.3 | 47.660 | 235 | 101 | 3 | 68 | 299 | 5 | 220 | 5.06e-62 | 197 |
| Msa0888000 | AT3G09600.8 | 47.660 | 235 | 101 | 3 | 68 | 299 | 5 | 220 | 5.06e-62 | 197 |
| Msa0888000 | AT3G09600.5 | 48.444 | 225 | 94 | 3 | 68 | 289 | 5 | 210 | 4.22e-60 | 192 |
| Msa0888000 | AT3G09600.9 | 48.444 | 225 | 94 | 3 | 68 | 289 | 5 | 210 | 4.22e-60 | 192 |
| Msa0888000 | AT5G37260.1 | 58.163 | 98 | 37 | 1 | 30 | 123 | 16 | 113 | 9.06e-26 | 104 |
| Msa0888000 | AT5G17300.1 | 53.608 | 97 | 37 | 1 | 35 | 123 | 40 | 136 | 5.11e-25 | 104 |
| Msa0888000 | AT1G01520.5 | 36.145 | 166 | 84 | 3 | 137 | 299 | 55 | 201 | 1.18e-24 | 99.4 |
| Msa0888000 | AT1G18330.1 | 53.191 | 94 | 36 | 1 | 39 | 124 | 39 | 132 | 1.42e-23 | 99.8 |
| Msa0888000 | AT3G10113.1 | 53.191 | 94 | 36 | 1 | 39 | 124 | 54 | 147 | 2.04e-23 | 99.0 |
| Msa0888000 | AT1G01060.8 | 55.844 | 77 | 34 | 0 | 32 | 108 | 6 | 82 | 2.09e-23 | 101 |
| Msa0888000 | AT1G01060.2 | 55.844 | 77 | 34 | 0 | 32 | 108 | 6 | 82 | 2.09e-23 | 101 |
| Msa0888000 | AT1G01060.3 | 55.844 | 77 | 34 | 0 | 32 | 108 | 6 | 82 | 2.09e-23 | 101 |
| Msa0888000 | AT1G01060.1 | 55.844 | 77 | 34 | 0 | 32 | 108 | 6 | 82 | 2.09e-23 | 101 |
| Msa0888000 | AT1G01060.7 | 55.844 | 77 | 34 | 0 | 32 | 108 | 6 | 82 | 2.09e-23 | 101 |
| Msa0888000 | AT1G01060.4 | 55.844 | 77 | 34 | 0 | 32 | 108 | 6 | 82 | 2.16e-23 | 101 |
| Msa0888000 | AT1G18330.2 | 53.191 | 94 | 36 | 1 | 39 | 124 | 65 | 158 | 2.63e-23 | 99.4 |
| Msa0888000 | AT2G46830.1 | 62.857 | 70 | 26 | 0 | 31 | 100 | 5 | 74 | 3.03e-23 | 100 |
Find 94 sgRNAs with CRISPR-Local
Find 680 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACCAAGTGGCCGCACTTT+TGG | 0.232835 | 6_1:-51684686 | None:intergenic |
| CAGAAACCTTCTGGCGGGTT+CGG | 0.236144 | 6_1:-51678315 | None:intergenic |
| CCTTACCTAATGCAAAATTA+TGG | 0.260116 | 6_1:-51686878 | None:intergenic |
| GTACGGCTTCCTGATCTTCT+TGG | 0.264852 | 6_1:-51678409 | None:intergenic |
| GTAAAGATTATTACCACTTT+TGG | 0.287124 | 6_1:-51684226 | None:intergenic |
| TGTAAATGCTCAGTTGCTTC+CGG | 0.292265 | 6_1:-51685541 | None:intergenic |
| CTTACGTGATCCTCAAAATC+TGG | 0.298138 | 6_1:-51685854 | None:intergenic |
| TAACCAAGTCTAGAGAAAAT+TGG | 0.315233 | 6_1:+51678436 | Msa0888000:CDS |
| TCAAGAAACTTGTCATGTTC+AGG | 0.315318 | 6_1:-51678465 | None:intergenic |
| AAACCAACTGAAAATTATAA+AGG | 0.321107 | 6_1:-51684766 | None:intergenic |
| GAATACATGAACCAATCTTA+TGG | 0.333263 | 6_1:-51686843 | None:intergenic |
| TGAACACTGTGGTGTCTTCC+TGG | 0.339021 | 6_1:+51684437 | Msa0888000:CDS |
| CTAAATACCATGTAACAAAT+TGG | 0.354102 | 6_1:-51684482 | None:intergenic |
| AGTGCTACTACTTAATTAGA+TGG | 0.355250 | 6_1:+51686812 | Msa0888000:exon |
| GGATCCAGGCAGAAACCTTC+TGG | 0.358407 | 6_1:-51678324 | None:intergenic |
| GCTTTGTGAAATTATTTGAT+AGG | 0.359147 | 6_1:+51687068 | Msa0888000:three_prime_UTR |
| TGTCCAGGTTTGACCGTGAT+TGG | 0.360886 | 6_1:+51682531 | Msa0888000:intron |
| TCGTCGTGCATCGGTCTATC+TGG | 0.362948 | 6_1:-51686779 | None:intergenic |
| CTGCAAGAATTATTCACCTT+TGG | 0.363429 | 6_1:-51684647 | None:intergenic |
| GTAAATGCTCAGTTGCTTCC+GGG | 0.364104 | 6_1:-51685540 | None:intergenic |
| TACTGTTTGTACTGTTATCT+AGG | 0.367929 | 6_1:+51687199 | Msa0888000:three_prime_UTR |
| TAACAGTACAAACAGTATCT+AGG | 0.368570 | 6_1:-51687193 | None:intergenic |
| AGCATGTCTCTACCGGGTTT+CGG | 0.378979 | 6_1:+51678351 | Msa0888000:CDS |
| CAAAACACCAATTTGTTACA+TGG | 0.379861 | 6_1:+51684475 | Msa0888000:CDS |
| TGGTTCATGTATTCAGCAAC+TGG | 0.386722 | 6_1:+51686852 | Msa0888000:three_prime_UTR |
| ATCTGGGCTAGTTAAATTGA+TGG | 0.398314 | 6_1:-51685837 | None:intergenic |
| CTAACATTTGTTATTTAAAG+AGG | 0.404219 | 6_1:+51687150 | Msa0888000:three_prime_UTR |
| AGAAACCTTCTGGCGGGTTC+GGG | 0.417308 | 6_1:-51678314 | None:intergenic |
| CGACGAGTTCACGGCGGCGA+AGG | 0.419440 | 6_1:-51678376 | None:intergenic |
| TCTCAAGTATACAACTTCAT+TGG | 0.420911 | 6_1:+51685505 | Msa0888000:CDS |
| GACACCACAGTGTTCATAAT+AGG | 0.421614 | 6_1:-51684430 | None:intergenic |
| GGCTAGTTAAATTGATGGAC+AGG | 0.422321 | 6_1:-51685832 | None:intergenic |
| ACTACTTAATTAGATGGGAT+TGG | 0.430111 | 6_1:+51686818 | Msa0888000:exon |
| TCCGACCAGCATGTCTCTAC+CGG | 0.440894 | 6_1:+51678344 | Msa0888000:CDS |
| TTGCATTAGGTAAGGTGCAT+TGG | 0.444344 | 6_1:+51686886 | Msa0888000:three_prime_UTR |
| CTAGACTTGGTTATCGTGTA+CGG | 0.446568 | 6_1:-51678426 | None:intergenic |
| GCGTAGTACTCACAGGTGTT+AGG | 0.446961 | 6_1:-51687239 | None:intergenic |
| GACGAGTTCACGGCGGCGAA+GGG | 0.446989 | 6_1:-51678375 | None:intergenic |
| AACCAACTGAAAATTATAAA+GGG | 0.448004 | 6_1:-51684765 | None:intergenic |
| CTTGATTCTCTTTATTCTGT+TGG | 0.448524 | 6_1:+51686984 | Msa0888000:three_prime_UTR |
| TCACCGGCTTTGCTTGAACC+TGG | 0.448756 | 6_1:+51684367 | Msa0888000:CDS |
| AGGAGTTTCAAGCATTGGTA+TGG | 0.456828 | 6_1:-51684410 | None:intergenic |
| TGGATCGAAGACTGTTATAC+AGG | 0.460170 | 6_1:+51682574 | Msa0888000:CDS |
| AGAAAGAACAAAGAAATTGC+AGG | 0.466474 | 6_1:+51687107 | Msa0888000:three_prime_UTR |
| ATAATAGGAGTTTCAAGCAT+TGG | 0.470835 | 6_1:-51684415 | None:intergenic |
| ATTAAAGTCTTGCCTCTCAA+TGG | 0.473231 | 6_1:-51684737 | None:intergenic |
| TTCAATGGCTCGTCGTGCAT+CGG | 0.476563 | 6_1:-51686788 | None:intergenic |
| GGCGTCTTCCGACGAGTTCA+CGG | 0.478542 | 6_1:-51678385 | None:intergenic |
| ACAAAGAAATTGCAGGTGAT+AGG | 0.482530 | 6_1:+51687114 | Msa0888000:three_prime_UTR |
| TGGGATTGGATCCATAAGAT+TGG | 0.485623 | 6_1:+51686832 | Msa0888000:three_prime_UTR |
| AAGACGCCTCCAAGAAGATC+AGG | 0.493667 | 6_1:+51678400 | Msa0888000:CDS |
| CGGCTTCCTGATCTTCTTGG+AGG | 0.501225 | 6_1:-51678406 | None:intergenic |
| CAACAGAATAAAGAGAATCA+AGG | 0.509144 | 6_1:-51686983 | None:intergenic |
| TTGTCTCTAGATCAACATCA+TGG | 0.510720 | 6_1:-51686742 | None:intergenic |
| ACTCCAAAAGTGCGGCCACT+TGG | 0.511504 | 6_1:+51684683 | Msa0888000:CDS |
| TTTCTAAAAGTTCAGAAGAG+TGG | 0.517774 | 6_1:+51684135 | Msa0888000:CDS |
| CCTGGTAATTGTCCGAGTAC+AGG | 0.518897 | 6_1:-51684331 | None:intergenic |
| CCTGTACTCGGACAATTACC+AGG | 0.522636 | 6_1:+51684331 | Msa0888000:CDS |
| GGGCGGAGGAAGATGTTCAT+TGG | 0.526400 | 6_1:-51684160 | None:intergenic |
| GCGGCGAAGGGGCCGAAACC+CGG | 0.527831 | 6_1:-51678363 | None:intergenic |
| TAAGTAGTAGCACTCTTCAA+TGG | 0.528602 | 6_1:-51686803 | None:intergenic |
| TGCTTACATGAAACCACAAA+AGG | 0.528840 | 6_1:-51684789 | None:intergenic |
| GTGCTACTACTTAATTAGAT+GGG | 0.530920 | 6_1:+51686813 | Msa0888000:exon |
| AACAGTACAAACAGTATCTA+GGG | 0.532425 | 6_1:-51687192 | None:intergenic |
| CCCGCCAGAAGGTTTCTGCC+TGG | 0.536343 | 6_1:+51678320 | Msa0888000:CDS |
| CATTGGCAGTGTATTTGACC+CGG | 0.546796 | 6_1:+51685522 | Msa0888000:CDS |
| TTACGTGATCCTCAAAATCT+GGG | 0.558719 | 6_1:-51685853 | None:intergenic |
| CTAACACAAGATCTTGTGAC+TGG | 0.560520 | 6_1:-51686931 | None:intergenic |
| TTGTGAAATTATTTGATAGG+TGG | 0.567152 | 6_1:+51687071 | Msa0888000:three_prime_UTR |
| TTGCAACGTGTGGTTTGACC+AGG | 0.572237 | 6_1:-51684455 | None:intergenic |
| TTTACAGAAACTCAAACAGA+TGG | 0.572259 | 6_1:+51685558 | Msa0888000:CDS |
| TATTTGACAGCTCCTGTACT+CGG | 0.573431 | 6_1:+51684319 | Msa0888000:intron |
| GGTGAAGATTGAAAAGATCC+TGG | 0.573493 | 6_1:-51684349 | None:intergenic |
| GAAACCCGGTAGAGACATGC+TGG | 0.577540 | 6_1:-51678349 | None:intergenic |
| AAGTCTTGCCTCTCAATGGA+AGG | 0.581032 | 6_1:-51684733 | None:intergenic |
| CCAGGCAGAAACCTTCTGGC+GGG | 0.583171 | 6_1:-51678320 | None:intergenic |
| TATCCAGGTTCAAGCAAAGC+CGG | 0.585795 | 6_1:-51684370 | None:intergenic |
| ACGAGTTCACGGCGGCGAAG+GGG | 0.588510 | 6_1:-51678374 | None:intergenic |
| CTCACTGTGGATCTGTGACT+TGG | 0.588876 | 6_1:-51687284 | None:intergenic |
| TGTCTCTAGATCAACATCAT+GGG | 0.603494 | 6_1:-51686741 | None:intergenic |
| CCGACCAGCATGTCTCTACC+GGG | 0.605441 | 6_1:+51678345 | Msa0888000:CDS |
| AATAAAAGCCTTCCATTGAG+AGG | 0.608090 | 6_1:+51684725 | Msa0888000:CDS |
| CTTCGCCGCCGTGAACTCGT+CGG | 0.610061 | 6_1:+51678377 | Msa0888000:CDS |
| TCCAGGCAGAAACCTTCTGG+CGG | 0.614423 | 6_1:-51678321 | None:intergenic |
| CCCGGTAGAGACATGCTGGT+CGG | 0.634090 | 6_1:-51678345 | None:intergenic |
| TTTAACGGCGTAGTACTCAC+AGG | 0.639657 | 6_1:-51687246 | None:intergenic |
| TGACTATTAGATTCACCAAG+TGG | 0.651813 | 6_1:-51684698 | None:intergenic |
| GGACCGCATAGATGTTGAGA+CGG | 0.654860 | 6_1:+51685579 | Msa0888000:CDS |
| TGGAAAGTTCACAAGCTGAG+AGG | 0.664175 | 6_1:+51686906 | Msa0888000:three_prime_UTR |
| CTGAAAGTACTCCAAAAGTG+CGG | 0.702417 | 6_1:+51684675 | Msa0888000:CDS |
| TGGTGTCAAAACGCTCACTG+TGG | 0.712352 | 6_1:-51687297 | None:intergenic |
| GTCTTCCGACGAGTTCACGG+CGG | 0.755866 | 6_1:-51678382 | None:intergenic |
| ATACCGTCTCAACATCTATG+CGG | 0.760612 | 6_1:-51685582 | None:intergenic |
| AACTCCTATTATGAACACTG+TGG | 0.802902 | 6_1:+51684426 | Msa0888000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAAAAAAAAAATTTAACA+GGG | - | chr6_1:51679505-51679524 | None:intergenic | 10.0% |
| !! | TTCAAAAAAAAAAATTTAAC+AGG | - | chr6_1:51679506-51679525 | None:intergenic | 10.0% |
| !!! | AAACTGTTTTTTTTTTTTTA+AGG | + | chr6_1:51680567-51680586 | Msa0888000:intron | 10.0% |
| !!! | AAATTTTTTGTTTTTTAAGA+AGG | - | chr6_1:51680774-51680793 | None:intergenic | 10.0% |
| !!! | TATAATTTGATTTGTATATA+TGG | - | chr6_1:51682350-51682369 | None:intergenic | 10.0% |
| !!! | ATAAAATGACATTATTTTTA+AGG | - | chr6_1:51684547-51684566 | None:intergenic | 10.0% |
| !! | TGCATAAAAATGTAAAAAAA+AGG | - | chr6_1:51678528-51678547 | None:intergenic | 15.0% |
| !!! | GAATTTAGGTTTTTTATTTT+TGG | + | chr6_1:51678673-51678692 | Msa0888000:intron | 15.0% |
| !!! | GTTTTTTATTTTTGGAATTA+GGG | + | chr6_1:51678681-51678700 | Msa0888000:intron | 15.0% |
| !!! | TAGCAATTTTCTTATTTTTA+AGG | + | chr6_1:51679430-51679449 | Msa0888000:intron | 15.0% |
| !!! | AAAAAACAAAAAATTTTGCA+GGG | - | chr6_1:51680778-51680797 | None:intergenic | 15.0% |
| !!! | TAAAAAACAAAAAATTTTGC+AGG | - | chr6_1:51680777-51680796 | None:intergenic | 15.0% |
| !! | AATAAATTAAACTGAAGAAA+TGG | + | chr6_1:51679756-51679775 | Msa0888000:intron | 15.0% |
| !! | ATAAATTAAACTGAAGAAAT+GGG | + | chr6_1:51679757-51679776 | Msa0888000:intron | 15.0% |
| !! | TAAACAAGAGAATTAAATTA+GGG | + | chr6_1:51680035-51680054 | Msa0888000:intron | 15.0% |
| !!! | TAAAAAACAAAAAATTTTGC+AGG | + | chr6_1:51680777-51680796 | Msa0888000:intron | 15.0% |
| !!! | AAAAAACAAAAAATTTTGCA+GGG | + | chr6_1:51680778-51680797 | Msa0888000:intron | 15.0% |
| !!! | TTTCAAAATTTTTTTTTACC+AGG | + | chr6_1:51680806-51680825 | Msa0888000:intron | 15.0% |
| !!! | TTCAAAATTTTTTTTTACCA+GGG | + | chr6_1:51680807-51680826 | Msa0888000:intron | 15.0% |
| !!! | GTAAAGTTTGATTATTTTTA+AGG | + | chr6_1:51681250-51681269 | Msa0888000:intron | 15.0% |
| !! | ACTAACTCAAATTAAAAATT+AGG | - | chr6_1:51681452-51681471 | None:intergenic | 15.0% |
| !!! | GCATATATTTTAAAAAGTAA+AGG | - | chr6_1:51682315-51682334 | None:intergenic | 15.0% |
| !! | TATGTGAATTCAAATAAAAA+AGG | + | chr6_1:51682817-51682836 | Msa0888000:intron | 15.0% |
| !! | TATCTAATAAAGAAAAGAAA+TGG | - | chr6_1:51683627-51683646 | None:intergenic | 15.0% |
| !!! | ATTTCTTTTCTTTATTAGAT+AGG | + | chr6_1:51683626-51683645 | Msa0888000:intron | 15.0% |
| !!! | AAGATATTAATGTTTTTGTT+TGG | + | chr6_1:51683997-51684016 | Msa0888000:intron | 15.0% |
| !!! | AGATATTAATGTTTTTGTTT+GGG | + | chr6_1:51683998-51684017 | Msa0888000:intron | 15.0% |
| !!! | TTAATTTAAGCATTTTGTTT+GGG | + | chr6_1:51684934-51684953 | Msa0888000:intron | 15.0% |
| !!! | CTCGTTTTTTTTTTAATTAT+TGG | + | chr6_1:51686006-51686025 | Msa0888000:intron | 15.0% |
| !!! | TTTTACAAAATTTGCAATTT+TGG | - | chr6_1:51686571-51686590 | None:intergenic | 15.0% |
| !!! | AATTGCAAATTTTGTAAAAT+AGG | + | chr6_1:51686572-51686591 | Msa0888000:intron | 15.0% |
| !!! | ATTGCAAATTTTGTAAAATA+GGG | + | chr6_1:51686573-51686592 | Msa0888000:intron | 15.0% |
| !! | TAAATTGATATGTTAGTTAG+TGG | + | chr6_1:51678588-51678607 | Msa0888000:intron | 20.0% |
| !!! | GGTTTTTTATTTTTGGAATT+AGG | + | chr6_1:51678680-51678699 | Msa0888000:intron | 20.0% |
| !!! | TGATTTTCTCAAATTTTTAG+TGG | - | chr6_1:51678805-51678824 | None:intergenic | 20.0% |
| !!! | TGTGAAATTTAGGTTTTTAT+GGG | + | chr6_1:51679083-51679102 | Msa0888000:intron | 20.0% |
| !! | ATTTATGAATTTGAAGATGT+TGG | + | chr6_1:51679124-51679143 | Msa0888000:intron | 20.0% |
| !! | TGTTTGAGAATTGAAATTTA+GGG | - | chr6_1:51679821-51679840 | None:intergenic | 20.0% |
| !! | TTGTTTGAGAATTGAAATTT+AGG | - | chr6_1:51679822-51679841 | None:intergenic | 20.0% |
| !! | GAATTAAATGAATTGAAGAA+AGG | + | chr6_1:51680010-51680029 | Msa0888000:intron | 20.0% |
| !! | GTAAACAAGAGAATTAAATT+AGG | + | chr6_1:51680034-51680053 | Msa0888000:intron | 20.0% |
| !! | AAACAAGAGAATTAAATTAG+GGG | + | chr6_1:51680036-51680055 | Msa0888000:intron | 20.0% |
| !!! | TTCACATATGAATTTGTTTA+TGG | + | chr6_1:51680359-51680378 | Msa0888000:intron | 20.0% |
| !!! | ATATGAATTTGTTTATGGTT+TGG | + | chr6_1:51680364-51680383 | Msa0888000:intron | 20.0% |
| !!! | TTTTCTTAAGTGTGTTTTTT+TGG | + | chr6_1:51680419-51680438 | Msa0888000:intron | 20.0% |
| !!! | TTTCTTAAGTGTGTTTTTTT+GGG | + | chr6_1:51680420-51680439 | Msa0888000:intron | 20.0% |
| !!! | ATTTTTTATTCTGCAAATTC+TGG | + | chr6_1:51680513-51680532 | Msa0888000:intron | 20.0% |
| !!! | TTTTTTATTCTGCAAATTCT+GGG | + | chr6_1:51680514-51680533 | Msa0888000:intron | 20.0% |
| !!! | GTCTTTTTAATTAGTCATTT+TGG | + | chr6_1:51681109-51681128 | Msa0888000:intron | 20.0% |
| !!! | CAACAAAATTTTCCTTTTAT+AGG | - | chr6_1:51681314-51681333 | None:intergenic | 20.0% |
| !!! | TGTCATTTTGTTTTGTTTAA+TGG | - | chr6_1:51682030-51682049 | None:intergenic | 20.0% |
| !!! | CTATAATTTTGTGTCATATT+AGG | + | chr6_1:51682076-51682095 | Msa0888000:intron | 20.0% |
| !! | TACTATAATTGTGTCATATT+AGG | + | chr6_1:51682132-51682151 | Msa0888000:intron | 20.0% |
| !!! | TTCTATTGTATTTTCGAAAA+AGG | - | chr6_1:51682168-51682187 | None:intergenic | 20.0% |
| !! | AGAAATAGAAAATACATCTA+TGG | + | chr6_1:51682191-51682210 | Msa0888000:intron | 20.0% |
| !! | GAAATAGAAAATACATCTAT+GGG | + | chr6_1:51682192-51682211 | Msa0888000:intron | 20.0% |
| !! | AATGTGAGAATAATACAAAA+TGG | - | chr6_1:51682492-51682511 | None:intergenic | 20.0% |
| !!! | TTCAATTTGAAATTCATTTC+AGG | + | chr6_1:51683094-51683113 | Msa0888000:intron | 20.0% |
| !!! | GATATTAATGTTTTTGTTTG+GGG | + | chr6_1:51683999-51684018 | Msa0888000:intron | 20.0% |
| !!! | TCATTTTTCATTATATATCC+AGG | - | chr6_1:51684388-51684407 | None:intergenic | 20.0% |
| !!! | GATAAATTTTTTAAGGTTAC+AGG | - | chr6_1:51684585-51684604 | None:intergenic | 20.0% |
| !! | AACCAACTGAAAATTATAAA+GGG | - | chr6_1:51684768-51684787 | None:intergenic | 20.0% |
| !! | AAACCAACTGAAAATTATAA+AGG | - | chr6_1:51684769-51684788 | None:intergenic | 20.0% |
| !!! | CTTAATTTAAGCATTTTGTT+TGG | + | chr6_1:51684933-51684952 | Msa0888000:intron | 20.0% |
| !! | CTTAATACCATTTCAAAATA+TGG | - | chr6_1:51685261-51685280 | None:intergenic | 20.0% |
| !!! | CATATTTTGAAATGGTATTA+AGG | + | chr6_1:51685259-51685278 | Msa0888000:intron | 20.0% |
| !! | ATATAGATATTAATTGTCAG+AGG | - | chr6_1:51685672-51685691 | None:intergenic | 20.0% |
| !! | AATTGTGTAAATGAAATTTG+TGG | + | chr6_1:51685745-51685764 | Msa0888000:intron | 20.0% |
| !!! | TTTTAATTATTGGTCTGAAT+CGG | + | chr6_1:51686016-51686035 | Msa0888000:intron | 20.0% |
| !!! | AATTTCTTTTGTAGGAATAT+TGG | + | chr6_1:51686151-51686170 | Msa0888000:intron | 20.0% |
| !!! | TTGCAAATTTTGTAAAATAG+GGG | + | chr6_1:51686574-51686593 | Msa0888000:intron | 20.0% |
| !!! | CTAACATTTGTTATTTAAAG+AGG | + | chr6_1:51687150-51687169 | Msa0888000:three_prime_UTR | 20.0% |
| !!! | TTTCTAAAACCTTCGAAAAA+TGG | + | chr6_1:51678281-51678300 | Msa0888000:exon | 25.0% |
| ! | AAATGATAAACTATGAAGCA+CGG | + | chr6_1:51678738-51678757 | Msa0888000:intron | 25.0% |
| !!! | GTGTGAAATTTAGGTTTTTA+TGG | + | chr6_1:51679082-51679101 | Msa0888000:intron | 25.0% |
| !!! | TTATTTTTGTACGTAAAACC+TGG | + | chr6_1:51679180-51679199 | Msa0888000:intron | 25.0% |
| ! | TTAGTTAAGGAACCTAATAA+AGG | + | chr6_1:51679309-51679328 | Msa0888000:intron | 25.0% |
| !! | CAACAGAATTTTCCTTTATT+AGG | - | chr6_1:51679324-51679343 | None:intergenic | 25.0% |
| !! | TTAAGGCTAAAATATGCTTT+TGG | + | chr6_1:51679447-51679466 | Msa0888000:intron | 25.0% |
| !!! | TTGTTTTTTAAAAAGGTCCT+TGG | + | chr6_1:51679546-51679565 | Msa0888000:intron | 25.0% |
| ! | ATTGAGAATTCATTTGTAGT+TGG | - | chr6_1:51679947-51679966 | None:intergenic | 25.0% |
| ! | AATTCATTTAATTCTCTTGC+AGG | - | chr6_1:51680004-51680023 | None:intergenic | 25.0% |
| !!! | AAACAATGGTGTTTTATTGA+CGG | + | chr6_1:51680248-51680267 | Msa0888000:intron | 25.0% |
| ! | TGTCAAATCATCAATAAAGT+GGG | + | chr6_1:51680740-51680759 | Msa0888000:intron | 25.0% |
| !! | AATAGGCTAAAATATGCTTT+TGG | - | chr6_1:51680865-51680884 | None:intergenic | 25.0% |
| ! | ACTAACTCAGCATTAAAAAT+AGG | - | chr6_1:51680882-51680901 | None:intergenic | 25.0% |
| ! | AGTGCAATAATAGTGAATTA+GGG | + | chr6_1:51680916-51680935 | Msa0888000:intron | 25.0% |
| !! | TTTTAGTAATTAAGGCAACT+AGG | - | chr6_1:51680967-51680986 | None:intergenic | 25.0% |
| ! | AGTTGCCTTAATTACTAAAA+TGG | + | chr6_1:51680967-51680986 | Msa0888000:intron | 25.0% |
| ! | GTTGCCTTAATTACTAAAAT+GGG | + | chr6_1:51680968-51680987 | Msa0888000:intron | 25.0% |
| !!! | TTTGCCCATTTTAGTAATTA+AGG | - | chr6_1:51680975-51680994 | None:intergenic | 25.0% |
| !!! | TTGCAATTTTGATAGATTCA+AGG | - | chr6_1:51681042-51681061 | None:intergenic | 25.0% |
| ! | TCAATTTAGTCCATGAATTT+AGG | + | chr6_1:51681162-51681181 | Msa0888000:intron | 25.0% |
| ! | CAATTTAGTCCATGAATTTA+GGG | + | chr6_1:51681163-51681182 | Msa0888000:intron | 25.0% |
| ! | ATTCAAAAACCCTAAATTCA+TGG | - | chr6_1:51681175-51681194 | None:intergenic | 25.0% |
| !!! | TGAATTTAGGGTTTTTGAAT+TGG | + | chr6_1:51681175-51681194 | Msa0888000:intron | 25.0% |
| !! | CTTTATGACTTTAAAGATGT+TGG | + | chr6_1:51681204-51681223 | Msa0888000:intron | 25.0% |
| ! | GGTTAAACGATAAAAAAAGA+AGG | - | chr6_1:51681400-51681419 | None:intergenic | 25.0% |
| ! | AGTGAAACAATAGTGAATTA+AGG | + | chr6_1:51681478-51681497 | Msa0888000:intron | 25.0% |
| ! | GTGAAACAATAGTGAATTAA+GGG | + | chr6_1:51681479-51681498 | Msa0888000:intron | 25.0% |
| ! | TTTCCCTTAATTCCTAAAAT+GGG | + | chr6_1:51681532-51681551 | Msa0888000:intron | 25.0% |
| !!! | TTTCCCATTTTAGGAATTAA+GGG | - | chr6_1:51681538-51681557 | None:intergenic | 25.0% |
| !!! | TTTTCCCATTTTAGGAATTA+AGG | - | chr6_1:51681539-51681558 | None:intergenic | 25.0% |
| ! | AAATGGAAAATTACACTTCA+GGG | - | chr6_1:51681575-51681594 | None:intergenic | 25.0% |
| !!! | ACGTATTTATTTTGTCGTTA+TGG | + | chr6_1:51681658-51681677 | Msa0888000:intron | 25.0% |
| !!! | AGGTTTGATTTTAGTTGTTA+AGG | + | chr6_1:51681778-51681797 | Msa0888000:intron | 25.0% |
| !!! | CAATTCTAGTTCTAGTATAT+AGG | - | chr6_1:51681829-51681848 | None:intergenic | 25.0% |
| ! | GGCTACTTATATTGAAATTA+TGG | + | chr6_1:51681881-51681900 | Msa0888000:intron | 25.0% |
| ! | AAATTATGGTTGTGTTTAAC+TGG | + | chr6_1:51681895-51681914 | Msa0888000:intron | 25.0% |
| ! | AGAAGAATTATACTGTCAAA+GGG | - | chr6_1:51681962-51681981 | None:intergenic | 25.0% |
| ! | TAGAAGAATTATACTGTCAA+AGG | - | chr6_1:51681963-51681982 | None:intergenic | 25.0% |
| !!! | TTTTTCCTTTTTCGAAACTT+TGG | + | chr6_1:51682104-51682123 | Msa0888000:intron | 25.0% |
| !!! | GTTTCTTCTTTTTACTTTTC+AGG | - | chr6_1:51682232-51682251 | None:intergenic | 25.0% |
| ! | TACAAGAAAGTAATGATCAT+TGG | - | chr6_1:51682258-51682277 | None:intergenic | 25.0% |
| ! | CTTTCTTGTAACAAATGTAA+AGG | + | chr6_1:51682268-51682287 | Msa0888000:intron | 25.0% |
| !! | AAAAAGATTGAAGCATTTGT+TGG | + | chr6_1:51682554-51682573 | Msa0888000:CDS | 25.0% |
| ! | AAGTTGCAAACTAAAATGAA+AGG | - | chr6_1:51682680-51682699 | None:intergenic | 25.0% |
| ! | CCAGTAACAAAAAATTTGTA+AGG | - | chr6_1:51682727-51682746 | None:intergenic | 25.0% |
| !!! | CCTTACAAATTTTTTGTTAC+TGG | + | chr6_1:51682724-51682743 | Msa0888000:intron | 25.0% |
| !!! | ATACATTTTTTAGAGAAACG+AGG | + | chr6_1:51683146-51683165 | Msa0888000:intron | 25.0% |
| !!! | TACATTTTTTAGAGAAACGA+GGG | + | chr6_1:51683147-51683166 | Msa0888000:intron | 25.0% |
| ! | CATAAATTGAAGAACATTGA+GGG | + | chr6_1:51683191-51683210 | Msa0888000:intron | 25.0% |
| !! | TTTTCTTTATTAGATAGGCT+TGG | + | chr6_1:51683631-51683650 | Msa0888000:intron | 25.0% |
| ! | TAACCATTGGATATAAATCA+TGG | - | chr6_1:51683761-51683780 | None:intergenic | 25.0% |
| ! | TGATTTATATCCAATGGTTA+AGG | + | chr6_1:51683761-51683780 | Msa0888000:intron | 25.0% |
| ! | GATTTATATCCAATGGTTAA+GGG | + | chr6_1:51683762-51683781 | Msa0888000:intron | 25.0% |
| !!! | GATATTTTTGTACATGTGTA+TGG | - | chr6_1:51683948-51683967 | None:intergenic | 25.0% |
| !! | TTTTAGTCCTTCTTAATATG+AGG | - | chr6_1:51684067-51684086 | None:intergenic | 25.0% |
| !!! | TTAGAAAGTATTTTTGTGCA+TGG | - | chr6_1:51684122-51684141 | None:intergenic | 25.0% |
| !! | GTAAAGATTATTACCACTTT+TGG | - | chr6_1:51684229-51684248 | None:intergenic | 25.0% |
| ! | CTAAATACCATGTAACAAAT+TGG | - | chr6_1:51684485-51684504 | None:intergenic | 25.0% |
| !!! | TGTCATTTTATTCAAGATAG+TGG | + | chr6_1:51684556-51684575 | Msa0888000:intron | 25.0% |
| !!! | GTCATTTTATTCAAGATAGT+GGG | + | chr6_1:51684557-51684576 | Msa0888000:intron | 25.0% |
| !!! | GTGGTCAGATAAATTTTTTA+AGG | - | chr6_1:51684592-51684611 | None:intergenic | 25.0% |
| !! | TTCCCTTTATAATTTTCAGT+TGG | + | chr6_1:51684763-51684782 | Msa0888000:CDS | 25.0% |
| ! | AATATCTGAGTGATTAATGT+GGG | - | chr6_1:51684983-51685002 | None:intergenic | 25.0% |
| ! | CATTTCAAAATATGGAGATA+TGG | - | chr6_1:51685253-51685272 | None:intergenic | 25.0% |
| !!! | CATATCTCCATATTTTGAAA+TGG | + | chr6_1:51685251-51685270 | Msa0888000:intron | 25.0% |
| ! | TTGTATACTTGAGAAAAATC+TGG | - | chr6_1:51685499-51685518 | None:intergenic | 25.0% |
| ! | TTAACAATCTAAAAGATCAG+TGG | - | chr6_1:51685888-51685907 | None:intergenic | 25.0% |
| !! | GAATTTTGTCATATCATGAA+AGG | + | chr6_1:51686105-51686124 | Msa0888000:intron | 25.0% |
| ! | ATTCCTACAAAAGAAATTGA+CGG | - | chr6_1:51686149-51686168 | None:intergenic | 25.0% |
| !! | TGATTGAAGTCGTATATTTT+GGG | + | chr6_1:51686393-51686412 | Msa0888000:intron | 25.0% |
| !! | TGCAAATTTTGTAAAATAGG+GGG | + | chr6_1:51686575-51686594 | Msa0888000:intron | 25.0% |
| ! | GCACACAATCATATATAAAA+AGG | - | chr6_1:51686665-51686684 | None:intergenic | 25.0% |
| ! | GCTTTGTGAAATTATTTGAT+AGG | + | chr6_1:51687068-51687087 | Msa0888000:three_prime_UTR | 25.0% |
| ! | TTGTGAAATTATTTGATAGG+TGG | + | chr6_1:51687071-51687090 | Msa0888000:three_prime_UTR | 25.0% |
| !! | TTTTGGATACCATTTTTCGA+AGG | - | chr6_1:51678293-51678312 | None:intergenic | 30.0% |
| TAACCAAGTCTAGAGAAAAT+TGG | + | chr6_1:51678436-51678455 | Msa0888000:CDS | 30.0% | |
| !!! | ACGGTTTTGTTAGTTTTATG+TGG | + | chr6_1:51678629-51678648 | Msa0888000:intron | 30.0% |
| !!! | GTTAGTTTTATGTGGTGAAT+TGG | + | chr6_1:51678637-51678656 | Msa0888000:intron | 30.0% |
| TGAATTTGAAGATGTTAGAG+TGG | + | chr6_1:51678715-51678734 | Msa0888000:intron | 30.0% | |
| AATGATAAACTATGAAGCAC+GGG | + | chr6_1:51678739-51678758 | Msa0888000:intron | 30.0% | |
| TTCAGTGTAATTATATGCGT+CGG | + | chr6_1:51678830-51678849 | Msa0888000:intron | 30.0% | |
| TGTGCTTCATCATTGATAAA+TGG | + | chr6_1:51678906-51678925 | Msa0888000:intron | 30.0% | |
| GTGCTTCATCATTGATAAAT+GGG | + | chr6_1:51678907-51678926 | Msa0888000:intron | 30.0% | |
| TTCATCATTGATAAATGGGT+AGG | + | chr6_1:51678911-51678930 | Msa0888000:intron | 30.0% | |
| TCATCATTGATAAATGGGTA+GGG | + | chr6_1:51678912-51678931 | Msa0888000:intron | 30.0% | |
| TTGAAATGAGTGTTTAGAGA+TGG | + | chr6_1:51679026-51679045 | Msa0888000:intron | 30.0% | |
| !!! | AGATGGTTTTGTTAGTTATG+TGG | + | chr6_1:51679043-51679062 | Msa0888000:intron | 30.0% |
| TGTTGGAGTAGAATGATAAA+TGG | + | chr6_1:51679141-51679160 | Msa0888000:intron | 30.0% | |
| CTCAAAAGATGAGTTTGTAT+GGG | - | chr6_1:51679378-51679397 | None:intergenic | 30.0% | |
| ACTCAAAAGATGAGTTTGTA+TGG | - | chr6_1:51679379-51679398 | None:intergenic | 30.0% | |
| ! | AATATAGCCAATTTGCGTTT+TGG | + | chr6_1:51679478-51679497 | Msa0888000:intron | 30.0% |
| TGCCAAATCATCAATAAAGT+GGG | - | chr6_1:51679573-51679592 | None:intergenic | 30.0% | |
| TAATTGAAATAAATGCCACG+TGG | - | chr6_1:51680665-51680684 | None:intergenic | 30.0% | |
| GAATTCATTTGTAGTTGGAT+TGG | - | chr6_1:51679942-51679961 | None:intergenic | 30.0% | |
| ATTAAATTAGGGGAAACAAG+AGG | + | chr6_1:51680046-51680065 | Msa0888000:intron | 30.0% | |
| ! | AACTCATTGTTGTTGAAAGA+GGG | + | chr6_1:51680200-51680219 | Msa0888000:intron | 30.0% |
| TGAGGTTACATGTAAAACAA+TGG | + | chr6_1:51680234-51680253 | Msa0888000:intron | 30.0% | |
| !! | AACAATGGTGTTTTATTGAC+GGG | + | chr6_1:51680249-51680268 | Msa0888000:intron | 30.0% |
| ! | CACTCTTTAGCTTCTATTAA+TGG | - | chr6_1:51680301-51680320 | None:intergenic | 30.0% |
| TTAATAGAAGCTAAAGAGTG+TGG | + | chr6_1:51680301-51680320 | Msa0888000:intron | 30.0% | |
| AAGATGAATGTATGTGTGAA+GGG | + | chr6_1:51680443-51680462 | Msa0888000:intron | 30.0% | |
| TAATTGAAATAAATGCCACG+TGG | + | chr6_1:51680665-51680684 | Msa0888000:intron | 30.0% | |
| GTGTCAAATCATCAATAAAG+TGG | + | chr6_1:51680739-51680758 | Msa0888000:intron | 30.0% | |
| GTCAAATCATCAATAAAGTG+GGG | + | chr6_1:51680741-51680760 | Msa0888000:intron | 30.0% | |
| !!! | TTGTTTTTTAAGAAGGTCCT+TGG | - | chr6_1:51680767-51680786 | None:intergenic | 30.0% |
| !! | AATATAGCCAATTTGGGTTT+TGG | - | chr6_1:51680834-51680853 | None:intergenic | 30.0% |
| GAGTGCAATAATAGTGAATT+AGG | + | chr6_1:51680915-51680934 | Msa0888000:intron | 30.0% | |
| GTGCAATAATAGTGAATTAG+GGG | + | chr6_1:51680917-51680936 | Msa0888000:intron | 30.0% | |
| ! | AAATGGGCAAACAATCATTT+TGG | + | chr6_1:51680984-51681003 | Msa0888000:intron | 30.0% |
| GTTGGAGTGTAAATGATAAA+TGG | + | chr6_1:51681222-51681241 | Msa0888000:intron | 30.0% | |
| AGTGTAAATGATAAATGGCT+AGG | + | chr6_1:51681227-51681246 | Msa0888000:intron | 30.0% | |
| GTGTAAATGATAAATGGCTA+GGG | + | chr6_1:51681228-51681247 | Msa0888000:intron | 30.0% | |
| TTGGTTAAGGAACCTATAAA+AGG | + | chr6_1:51681299-51681318 | Msa0888000:intron | 30.0% | |
| AAAAGAAGGCAAGTTTGTAT+GGG | - | chr6_1:51681386-51681405 | None:intergenic | 30.0% | |
| AAAAAGAAGGCAAGTTTGTA+TGG | - | chr6_1:51681387-51681406 | None:intergenic | 30.0% | |
| TTTAGGAATTAAGGGAAACT+AGG | - | chr6_1:51681530-51681549 | None:intergenic | 30.0% | |
| GTTTCCCTTAATTCCTAAAA+TGG | + | chr6_1:51681531-51681550 | Msa0888000:intron | 30.0% | |
| ! | AATGATGGTTTTCCCATTTT+AGG | - | chr6_1:51681547-51681566 | None:intergenic | 30.0% |
| GAAATGGAAAATTACACTTC+AGG | - | chr6_1:51681576-51681595 | None:intergenic | 30.0% | |
| ! | GATGCATTTGAGATATCAAT+TGG | + | chr6_1:51681733-51681752 | Msa0888000:intron | 30.0% |
| ATTGGAAAAGCTATAGCATA+AGG | + | chr6_1:51681751-51681770 | Msa0888000:intron | 30.0% | |
| !!! | TGATTTTAGTTGTTAAGGAG+AGG | + | chr6_1:51681783-51681802 | Msa0888000:intron | 30.0% |
| !!! | GATTTTAGTTGTTAAGGAGA+GGG | + | chr6_1:51681784-51681803 | Msa0888000:intron | 30.0% |
| ACAGTATAATTCTTCTACGT+GGG | + | chr6_1:51681966-51681985 | Msa0888000:intron | 30.0% | |
| !! | CTTCTTTTTACTTTTCAGGA+GGG | - | chr6_1:51682228-51682247 | None:intergenic | 30.0% |
| !! | TCTTCTTTTTACTTTTCAGG+AGG | - | chr6_1:51682229-51682248 | None:intergenic | 30.0% |
| ! | CTTCAATCTTTTTCCAATCA+CGG | - | chr6_1:51682547-51682566 | None:intergenic | 30.0% |
| TAATGATATTGATGCACTTC+TGG | - | chr6_1:51682628-51682647 | None:intergenic | 30.0% | |
| !!! | AATTTTTTGTTACTGGTGCT+TGG | + | chr6_1:51682731-51682750 | Msa0888000:intron | 30.0% |
| !!! | ATTTTTTGTTACTGGTGCTT+GGG | + | chr6_1:51682732-51682751 | Msa0888000:intron | 30.0% |
| AATCCATGATTTAGTAATGC+AGG | + | chr6_1:51682848-51682867 | Msa0888000:intron | 30.0% | |
| TTACCTGCATTACTAAATCA+TGG | - | chr6_1:51682854-51682873 | None:intergenic | 30.0% | |
| GATTTAGTAATGCAGGTAAT+TGG | + | chr6_1:51682855-51682874 | Msa0888000:intron | 30.0% | |
| AGTGAACATTGATGAGAATA+TGG | - | chr6_1:51682959-51682978 | None:intergenic | 30.0% | |
| ATCAACTTTCTAATGAACCA+GGG | - | chr6_1:51683025-51683044 | None:intergenic | 30.0% | |
| AATCAACTTTCTAATGAACC+AGG | - | chr6_1:51683026-51683045 | None:intergenic | 30.0% | |
| AAAAGGTTGTTTGGTTGTTA+AGG | + | chr6_1:51683068-51683087 | Msa0888000:intron | 30.0% | |
| GCATAAATTGAAGAACATTG+AGG | + | chr6_1:51683190-51683209 | Msa0888000:intron | 30.0% | |
| GGTATAGAATAAAAGAGAGA+CGG | - | chr6_1:51683287-51683306 | None:intergenic | 30.0% | |
| GAATGTAGGCTATAGATAAA+AGG | + | chr6_1:51683491-51683510 | Msa0888000:intron | 30.0% | |
| ! | TTTTTGTACATGTGTATGGA+AGG | - | chr6_1:51683944-51683963 | None:intergenic | 30.0% |
| ! | TTTCTAAAAGTTCAGAAGAG+TGG | + | chr6_1:51684135-51684154 | Msa0888000:CDS | 30.0% |
| ATAATAGGAGTTTCAAGCAT+TGG | - | chr6_1:51684418-51684437 | None:intergenic | 30.0% | |
| !! | CAAAACACCAATTTGTTACA+TGG | + | chr6_1:51684475-51684494 | Msa0888000:CDS | 30.0% |
| ACTTTCATATCTAAAAGCCA+TGG | + | chr6_1:51684891-51684910 | Msa0888000:intron | 30.0% | |
| GAATATCTGAGTGATTAATG+TGG | - | chr6_1:51684984-51685003 | None:intergenic | 30.0% | |
| AAAAAAGGCAATTAGAGCTT+AGG | + | chr6_1:51685194-51685213 | Msa0888000:intron | 30.0% | |
| CTTGGCATAATCAAAGATTT+GGG | - | chr6_1:51685290-51685309 | None:intergenic | 30.0% | |
| TCTTGGCATAATCAAAGATT+TGG | - | chr6_1:51685291-51685310 | None:intergenic | 30.0% | |
| ! | TTTAGAGCGTGATAAAATGT+GGG | - | chr6_1:51685326-51685345 | None:intergenic | 30.0% |
| ! | ATTTAGAGCGTGATAAAATG+TGG | - | chr6_1:51685327-51685346 | None:intergenic | 30.0% |
| AGATGTTCAATTATGAGCTT+AGG | + | chr6_1:51685376-51685395 | Msa0888000:intron | 30.0% | |
| GATGTTCAATTATGAGCTTA+GGG | + | chr6_1:51685377-51685396 | Msa0888000:intron | 30.0% | |
| ATGTTCAATTATGAGCTTAG+GGG | + | chr6_1:51685378-51685397 | Msa0888000:intron | 30.0% | |
| TCAACAACATAGTAAATGTC+TGG | - | chr6_1:51685418-51685437 | None:intergenic | 30.0% | |
| TCTCAAGTATACAACTTCAT+TGG | + | chr6_1:51685505-51685524 | Msa0888000:CDS | 30.0% | |
| TTTACAGAAACTCAAACAGA+TGG | + | chr6_1:51685558-51685577 | Msa0888000:CDS | 30.0% | |
| CATTTACACAATTATCACAC+AGG | - | chr6_1:51685738-51685757 | None:intergenic | 30.0% | |
| !!! | TGAATCGGAGTATGATTTTT+TGG | + | chr6_1:51686031-51686050 | Msa0888000:intron | 30.0% |
| ! | ACAAAATTCACTAAGTTGAG+AGG | - | chr6_1:51686094-51686113 | None:intergenic | 30.0% |
| AGGTATGTGACATATTTCAA+GGG | - | chr6_1:51686209-51686228 | None:intergenic | 30.0% | |
| AAGGTATGTGACATATTTCA+AGG | - | chr6_1:51686210-51686229 | None:intergenic | 30.0% | |
| ATCTCTGTTGTAAAACTACA+GGG | + | chr6_1:51686272-51686291 | Msa0888000:intron | 30.0% | |
| AAATATACGACTTCAATCAG+CGG | - | chr6_1:51686392-51686411 | None:intergenic | 30.0% | |
| ! | CTGATTGAAGTCGTATATTT+TGG | + | chr6_1:51686392-51686411 | Msa0888000:intron | 30.0% |
| ! | AGTGCTACTACTTAATTAGA+TGG | + | chr6_1:51686812-51686831 | Msa0888000:exon | 30.0% |
| ! | GTGCTACTACTTAATTAGAT+GGG | + | chr6_1:51686813-51686832 | Msa0888000:exon | 30.0% |
| ACTACTTAATTAGATGGGAT+TGG | + | chr6_1:51686818-51686837 | Msa0888000:exon | 30.0% | |
| GAATACATGAACCAATCTTA+TGG | - | chr6_1:51686846-51686865 | None:intergenic | 30.0% | |
| ! | GGAATCCATAATTTTGCATT+AGG | + | chr6_1:51686873-51686892 | Msa0888000:three_prime_UTR | 30.0% |
| CCTTACCTAATGCAAAATTA+TGG | - | chr6_1:51686881-51686900 | None:intergenic | 30.0% | |
| ! | CCATAATTTTGCATTAGGTA+AGG | + | chr6_1:51686878-51686897 | Msa0888000:three_prime_UTR | 30.0% |
| CAACAGAATAAAGAGAATCA+AGG | - | chr6_1:51686986-51687005 | None:intergenic | 30.0% | |
| CTTGATTCTCTTTATTCTGT+TGG | + | chr6_1:51686984-51687003 | Msa0888000:three_prime_UTR | 30.0% | |
| AGAAAGAACAAAGAAATTGC+AGG | + | chr6_1:51687107-51687126 | Msa0888000:three_prime_UTR | 30.0% | |
| AACAGTACAAACAGTATCTA+GGG | - | chr6_1:51687195-51687214 | None:intergenic | 30.0% | |
| TAACAGTACAAACAGTATCT+AGG | - | chr6_1:51687196-51687215 | None:intergenic | 30.0% | |
| TACTGTTTGTACTGTTATCT+AGG | + | chr6_1:51687199-51687218 | Msa0888000:three_prime_UTR | 30.0% | |
| ! | AGTCCAATTTTCTCTAGACT+TGG | - | chr6_1:51678442-51678461 | None:intergenic | 35.0% |
| TCAAGAAACTTGTCATGTTC+AGG | - | chr6_1:51678468-51678487 | None:intergenic | 35.0% | |
| ! | TGTGCAAAGGTGTGAAATTT+AGG | + | chr6_1:51679073-51679092 | Msa0888000:intron | 35.0% |
| !! | TTTAGGTTTTTATGGGAGTG+AGG | + | chr6_1:51679090-51679109 | Msa0888000:intron | 35.0% |
| TTTGAATCCAAGAGACAGTA+TGG | - | chr6_1:51679225-51679244 | None:intergenic | 35.0% | |
| ! | TGTCCTTAGGGTATTAGTTA+AGG | + | chr6_1:51679296-51679315 | Msa0888000:intron | 35.0% |
| GTTCCTTAACTAATACCCTA+AGG | - | chr6_1:51679302-51679321 | None:intergenic | 35.0% | |
| GCAAATTGGCTATATTTGCA+GGG | - | chr6_1:51679474-51679493 | None:intergenic | 35.0% | |
| ! | GTCCCACTTTATTGATGATT+TGG | + | chr6_1:51679568-51679587 | Msa0888000:intron | 35.0% |
| GTGCCAAATCATCAATAAAG+TGG | - | chr6_1:51679574-51679593 | None:intergenic | 35.0% | |
| ! | TATGTGGGTTGTTTGAGATT+GGG | - | chr6_1:51679875-51679894 | None:intergenic | 35.0% |
| ! | ATATGTGGGTTGTTTGAGAT+TGG | - | chr6_1:51679876-51679895 | None:intergenic | 35.0% |
| !! | ATGAGGTTGGTATGATATGT+GGG | - | chr6_1:51679890-51679909 | None:intergenic | 35.0% |
| !! | AGTTGGATTGGTGTTAATAG+TGG | - | chr6_1:51679930-51679949 | None:intergenic | 35.0% |
| AATTCGCAATGAATCCTCAT+CGG | + | chr6_1:51679964-51679983 | Msa0888000:intron | 35.0% | |
| ! | ATTTTTCTTCGATTCCGATG+AGG | - | chr6_1:51679981-51680000 | None:intergenic | 35.0% |
| ! | GAACTCATTGTTGTTGAAAG+AGG | + | chr6_1:51680199-51680218 | Msa0888000:intron | 35.0% |
| ACTGCAAATGTTATAGTGAG+TGG | + | chr6_1:51680388-51680407 | Msa0888000:intron | 35.0% | |
| CTGCAAATGTTATAGTGAGT+GGG | + | chr6_1:51680389-51680408 | Msa0888000:intron | 35.0% | |
| GAAGATGAATGTATGTGTGA+AGG | + | chr6_1:51680442-51680461 | Msa0888000:intron | 35.0% | |
| CCTGCAAATATAGCCAATTT+GGG | - | chr6_1:51679472-51679491 | None:intergenic | 35.0% | |
| CCAAATTGGCTATATTTGCA+GGG | + | chr6_1:51680838-51680857 | Msa0888000:intron | 35.0% | |
| TTATCGTTTAACCAATGCGT+CGG | + | chr6_1:51681407-51681426 | Msa0888000:intron | 35.0% | |
| TCCATTTCAAAGACTCTCAT+TGG | + | chr6_1:51681588-51681607 | Msa0888000:intron | 35.0% | |
| ! | ACCAATGAGAGTCTTTGAAA+TGG | - | chr6_1:51681592-51681611 | None:intergenic | 35.0% |
| TACGTAAACTGACAAAACTG+AGG | - | chr6_1:51681643-51681662 | None:intergenic | 35.0% | |
| ! | TCGATTTCAAGTGGAACATA+TGG | - | chr6_1:51681854-51681873 | None:intergenic | 35.0% |
| TCCACTTGAAATCGAATACT+TGG | + | chr6_1:51681859-51681878 | Msa0888000:intron | 35.0% | |
| CCACTTGAAATCGAATACTT+GGG | + | chr6_1:51681860-51681879 | Msa0888000:intron | 35.0% | |
| GACAGTATAATTCTTCTACG+TGG | + | chr6_1:51681965-51681984 | Msa0888000:intron | 35.0% | |
| !!! | TCCTTTTTCGAAACTTTGGA+TGG | + | chr6_1:51682108-51682127 | Msa0888000:intron | 35.0% |
| ACCATCCAAAGTTTCGAAAA+AGG | - | chr6_1:51682112-51682131 | None:intergenic | 35.0% | |
| ATGTCAATCATTGCATTGCA+AGG | + | chr6_1:51682407-51682426 | Msa0888000:intron | 35.0% | |
| CGAATTCCTTTCGATAAATG+TGG | + | chr6_1:51682436-51682455 | Msa0888000:intron | 35.0% | |
| CAACTACCACATTTATCGAA+AGG | - | chr6_1:51682445-51682464 | None:intergenic | 35.0% | |
| TTCGATAAATGTGGTAGTTG+CGG | + | chr6_1:51682445-51682464 | Msa0888000:intron | 35.0% | |
| !! | TTTTCATGGGTCTGTTGATT+TGG | - | chr6_1:51682760-51682779 | None:intergenic | 35.0% |
| AACAGACCCATGAAAAGAAA+CGG | + | chr6_1:51682764-51682783 | Msa0888000:intron | 35.0% | |
| !!! | TCCTGTTTTGAAGAGTGAAA+AGG | + | chr6_1:51683051-51683070 | Msa0888000:intron | 35.0% |
| ! | ACCTTTTCACTCTTCAAAAC+AGG | - | chr6_1:51683055-51683074 | None:intergenic | 35.0% |
| TGAAGAGTGAAAAGGTTGTT+TGG | + | chr6_1:51683059-51683078 | Msa0888000:intron | 35.0% | |
| TAGCTAGTTATTTGAGAGCT+GGG | - | chr6_1:51683250-51683269 | None:intergenic | 35.0% | |
| ATACCTAACATTGTCCAGTT+AGG | + | chr6_1:51683302-51683321 | Msa0888000:intron | 35.0% | |
| CCTACATTCTCCAAATTATC+TGG | - | chr6_1:51683480-51683499 | None:intergenic | 35.0% | |
| CCAGATAATTTGGAGAATGT+AGG | + | chr6_1:51683477-51683496 | Msa0888000:intron | 35.0% | |
| ATAAAAGGAGAGATTGAGAG+AGG | + | chr6_1:51683506-51683525 | Msa0888000:intron | 35.0% | |
| ! | GTTTTGTGCAGAAAATCACA+CGG | - | chr6_1:51683560-51683579 | None:intergenic | 35.0% |
| GGAATAGAGTCACAATGTTT+GGG | - | chr6_1:51683678-51683697 | None:intergenic | 35.0% | |
| AGGAATAGAGTCACAATGTT+TGG | - | chr6_1:51683679-51683698 | None:intergenic | 35.0% | |
| AACGAGAAATTCACGAGAAA+GGG | - | chr6_1:51683703-51683722 | None:intergenic | 35.0% | |
| AAACGAGAAATTCACGAGAA+AGG | - | chr6_1:51683704-51683723 | None:intergenic | 35.0% | |
| ! | TGTGGTTGGTTCATTTATCA+TGG | - | chr6_1:51683886-51683905 | None:intergenic | 35.0% |
| ATAGTTCACTGCAATCATTG+TGG | - | chr6_1:51683904-51683923 | None:intergenic | 35.0% | |
| ATGCATGCCTCATATTAAGA+AGG | + | chr6_1:51684057-51684076 | Msa0888000:intron | 35.0% | |
| !! | TTGGAAGCTTTTTGAGGATA+GGG | - | chr6_1:51684210-51684229 | None:intergenic | 35.0% |
| !! | TTTGGAAGCTTTTTGAGGAT+AGG | - | chr6_1:51684211-51684230 | None:intergenic | 35.0% |
| CTGTAGTTATATTGTCTCAC+AGG | - | chr6_1:51684275-51684294 | None:intergenic | 35.0% | |
| ! | AGGATCTTTTCAATCTTCAC+CGG | + | chr6_1:51684351-51684370 | Msa0888000:CDS | 35.0% |
| AACTCCTATTATGAACACTG+TGG | + | chr6_1:51684426-51684445 | Msa0888000:CDS | 35.0% | |
| ATGTTGCAAACACAAGAAAG+TGG | - | chr6_1:51684611-51684630 | None:intergenic | 35.0% | |
| CTGCAAGAATTATTCACCTT+TGG | - | chr6_1:51684650-51684669 | None:intergenic | 35.0% | |
| TGACTATTAGATTCACCAAG+TGG | - | chr6_1:51684701-51684720 | None:intergenic | 35.0% | |
| AATAAAAGCCTTCCATTGAG+AGG | + | chr6_1:51684725-51684744 | Msa0888000:CDS | 35.0% | |
| ATTAAAGTCTTGCCTCTCAA+TGG | - | chr6_1:51684740-51684759 | None:intergenic | 35.0% | |
| !! | TTTCAGTTGGTTTCCTTTTG+TGG | + | chr6_1:51684776-51684795 | Msa0888000:CDS | 35.0% |
| TGCTTACATGAAACCACAAA+AGG | - | chr6_1:51684792-51684811 | None:intergenic | 35.0% | |
| ! | TTTTGTGGTTTCATGTAAGC+AGG | + | chr6_1:51684791-51684810 | Msa0888000:intron | 35.0% |
| TTTGTGGTTTCATGTAAGCA+GGG | + | chr6_1:51684792-51684811 | Msa0888000:intron | 35.0% | |
| !!! | TACGCAGTTTTTTCTGAAAC+AGG | + | chr6_1:51684838-51684857 | Msa0888000:intron | 35.0% |
| ATCTAAAAGCCATGGTATGT+TGG | + | chr6_1:51684899-51684918 | Msa0888000:intron | 35.0% | |
| ACTACAAATCCAACATACCA+TGG | - | chr6_1:51684911-51684930 | None:intergenic | 35.0% | |
| TCCTACATCAACTAGAGATT+TGG | + | chr6_1:51685034-51685053 | Msa0888000:intron | 35.0% | |
| GTTGATATCAAAACCTATCC+TGG | + | chr6_1:51685115-51685134 | Msa0888000:intron | 35.0% | |
| ! | TTTATCACGCTCTAAATGTC+TGG | + | chr6_1:51685330-51685349 | Msa0888000:intron | 35.0% |
| ! | ATAATTGAACATCTGAAGCG+TGG | - | chr6_1:51685370-51685389 | None:intergenic | 35.0% |
| TGTTCAATTATGAGCTTAGG+GGG | + | chr6_1:51685379-51685398 | Msa0888000:intron | 35.0% | |
| TGTTATTCTGTCAGCTTGAT+TGG | + | chr6_1:51685605-51685624 | Msa0888000:intron | 35.0% | |
| TGATTGGATTCTGTTGTACT+TGG | + | chr6_1:51685621-51685640 | Msa0888000:intron | 35.0% | |
| ACACAGGTCAATGATAAATC+AGG | - | chr6_1:51685722-51685741 | None:intergenic | 35.0% | |
| TGCTTACAAATGTATGGTCT+TGG | + | chr6_1:51685779-51685798 | Msa0888000:intron | 35.0% | |
| !! | ATCTGGGCTAGTTAAATTGA+TGG | - | chr6_1:51685840-51685859 | None:intergenic | 35.0% |
| ! | TTTAACTAGCCCAGATTTTG+AGG | + | chr6_1:51685844-51685863 | Msa0888000:CDS | 35.0% |
| TTACGTGATCCTCAAAATCT+GGG | - | chr6_1:51685856-51685875 | None:intergenic | 35.0% | |
| AGCATTCCTAGAGTTCATTA+TGG | + | chr6_1:51685963-51685982 | Msa0888000:intron | 35.0% | |
| AGTGTACCATAATGAACTCT+AGG | - | chr6_1:51685972-51685991 | None:intergenic | 35.0% | |
| GAGAGGAAAAATTACAGACT+AGG | - | chr6_1:51686077-51686096 | None:intergenic | 35.0% | |
| ! | GTACCGTCAATTTCTTTTGT+AGG | + | chr6_1:51686143-51686162 | Msa0888000:intron | 35.0% |
| TATGTGACATATTTCAAGGG+AGG | - | chr6_1:51686206-51686225 | None:intergenic | 35.0% | |
| ! | GCGTCTTTTGTAAAATGGAA+AGG | - | chr6_1:51686229-51686248 | None:intergenic | 35.0% |
| ! | TTTGGGCGTCTTTTGTAAAA+TGG | - | chr6_1:51686234-51686253 | None:intergenic | 35.0% |
| ! | AGTTTTACAACAGAGATGAG+AGG | - | chr6_1:51686269-51686288 | None:intergenic | 35.0% |
| CATCTCTGTTGTAAAACTAC+AGG | + | chr6_1:51686271-51686290 | Msa0888000:intron | 35.0% | |
| ! | ATGTTATTTAGGCATACCTC+AGG | + | chr6_1:51686321-51686340 | Msa0888000:intron | 35.0% |
| ATGTCAACCAAATTGAAAGC+CGG | + | chr6_1:51686533-51686552 | Msa0888000:intron | 35.0% | |
| !! | CTATTTTTCCACCGCAATAT+TGG | - | chr6_1:51686602-51686621 | None:intergenic | 35.0% |
| ATATTGCGGTGGAAAAATAG+TGG | + | chr6_1:51686602-51686621 | Msa0888000:intron | 35.0% | |
| !! | AAAATAGTGGACCAAAGTTG+CGG | + | chr6_1:51686615-51686634 | Msa0888000:intron | 35.0% |
| TGTTACTATATCCGCAACTT+TGG | - | chr6_1:51686629-51686648 | None:intergenic | 35.0% | |
| TGTCTCTAGATCAACATCAT+GGG | - | chr6_1:51686744-51686763 | None:intergenic | 35.0% | |
| TTGTCTCTAGATCAACATCA+TGG | - | chr6_1:51686745-51686764 | None:intergenic | 35.0% | |
| TAAGTAGTAGCACTCTTCAA+TGG | - | chr6_1:51686806-51686825 | None:intergenic | 35.0% | |
| ACAAAGAAATTGCAGGTGAT+AGG | + | chr6_1:51687114-51687133 | Msa0888000:three_prime_UTR | 35.0% | |
| !!! | GAGAGAGAGAGAGTTTTGTT+TGG | - | chr6_1:51678237-51678256 | None:intergenic | 40.0% |
| ! | CTAGACTTGGTTATCGTGTA+CGG | - | chr6_1:51678429-51678448 | None:intergenic | 40.0% |
| ATGTGGTGAATTGGTTGCAA+AGG | + | chr6_1:51678646-51678665 | Msa0888000:intron | 40.0% | |
| ! | GTTGCAAAGGTGTGGAATTT+AGG | + | chr6_1:51678659-51678678 | Msa0888000:intron | 40.0% |
| ! | GTAATTATATGCGTCGGTGT+TGG | + | chr6_1:51678836-51678855 | Msa0888000:intron | 40.0% |
| ATGTGGTGAATTGTGTGCAA+AGG | + | chr6_1:51679060-51679079 | Msa0888000:intron | 40.0% | |
| TTGTGTTCTTCTGTAGACCA+AGG | + | chr6_1:51679260-51679279 | Msa0888000:intron | 40.0% | |
| ! | TTTTGCTAACGAGTGTCCTT+AGG | + | chr6_1:51679283-51679302 | Msa0888000:intron | 40.0% |
| TTTGCTAACGAGTGTCCTTA+GGG | + | chr6_1:51679284-51679303 | Msa0888000:intron | 40.0% | |
| CGCAAATTGGCTATATTTGC+AGG | - | chr6_1:51679475-51679494 | None:intergenic | 40.0% | |
| TCATCAATAAAGTGGGACCA+AGG | - | chr6_1:51679566-51679585 | None:intergenic | 40.0% | |
| ! | TTGGCACATTTTTGCATACG+TGG | + | chr6_1:51679587-51679606 | Msa0888000:intron | 40.0% |
| TGGGACTAGGAAATTGGATT+GGG | - | chr6_1:51679856-51679875 | None:intergenic | 40.0% | |
| TTGGGACTAGGAAATTGGAT+TGG | - | chr6_1:51679857-51679876 | None:intergenic | 40.0% | |
| TGAGATTGGGACTAGGAAAT+TGG | - | chr6_1:51679862-51679881 | None:intergenic | 40.0% | |
| !! | GATGAGGTTGGTATGATATG+TGG | - | chr6_1:51679891-51679910 | None:intergenic | 40.0% |
| GATGATGATAAGGATGAGGT+TGG | - | chr6_1:51679903-51679922 | None:intergenic | 40.0% | |
| !! | TGGATTGGTGTTAATAGTGG+CGG | - | chr6_1:51679927-51679946 | None:intergenic | 40.0% |
| GATCTATGAGAAGAACGATG+CGG | + | chr6_1:51680134-51680153 | Msa0888000:intron | 40.0% | |
| GTGTGGGAGTAATGTATCAT+TGG | + | chr6_1:51680160-51680179 | Msa0888000:intron | 40.0% | |
| GTTGAAAGAGGGAATGAAAC+AGG | + | chr6_1:51680211-51680230 | Msa0888000:intron | 40.0% | |
| TCTATTAATGGCGTCACCAA+GGG | - | chr6_1:51680289-51680308 | None:intergenic | 40.0% | |
| TTCTATTAATGGCGTCACCA+AGG | - | chr6_1:51680290-51680309 | None:intergenic | 40.0% | |
| AGACCTGGGAATTGGAATTT+GGG | + | chr6_1:51680476-51680495 | Msa0888000:intron | 40.0% | |
| ATACGTGACATTAGCTGACT+GGG | - | chr6_1:51680711-51680730 | None:intergenic | 40.0% | |
| TATACGTGACATTAGCTGAC+TGG | - | chr6_1:51680712-51680731 | None:intergenic | 40.0% | |
| CCCAAATTGGCTATATTTGC+AGG | + | chr6_1:51680837-51680856 | Msa0888000:intron | 40.0% | |
| CCCTGCAAATATAGCCAATT+TGG | - | chr6_1:51679471-51679490 | None:intergenic | 40.0% | |
| AGTGTAACTGGTTGTCACAT+TGG | + | chr6_1:51681015-51681034 | Msa0888000:intron | 40.0% | |
| ATGTTCAATTCAGTCCTCGT+TGG | + | chr6_1:51681139-51681158 | Msa0888000:intron | 40.0% | |
| ! | ATGGACTAAATTGACCAACG+AGG | - | chr6_1:51681156-51681175 | None:intergenic | 40.0% |
| TATCGTTTAACCAATGCGTC+GGG | + | chr6_1:51681408-51681427 | Msa0888000:intron | 40.0% | |
| CACTTCAGGGACTAAAATGA+TGG | - | chr6_1:51681562-51681581 | None:intergenic | 40.0% | |
| ! | ATGGTGTCAAATTCCACTCT+TGG | + | chr6_1:51681677-51681696 | Msa0888000:intron | 40.0% |
| AAGCTATAGCATAAGGACAG+AGG | + | chr6_1:51681758-51681777 | Msa0888000:intron | 40.0% | |
| CCCAAGTATTCGATTTCAAG+TGG | - | chr6_1:51681863-51681882 | None:intergenic | 40.0% | |
| !! | GAAAGTACTACTGGTCAACT+GGG | - | chr6_1:51681940-51681959 | None:intergenic | 40.0% |
| !! | TGTCAAAGGGAAAGTACTAC+TGG | - | chr6_1:51681949-51681968 | None:intergenic | 40.0% |
| GACATGAAGCTGTGTTACAT+TGG | + | chr6_1:51682046-51682065 | Msa0888000:intron | 40.0% | |
| TGAAGCTGTGTTACATTGGA+TGG | + | chr6_1:51682050-51682069 | Msa0888000:intron | 40.0% | |
| AAACCTGGACAGAGGAATAA+GGG | - | chr6_1:51682522-51682541 | None:intergenic | 40.0% | |
| TGGATCGAAGACTGTTATAC+AGG | + | chr6_1:51682574-51682593 | Msa0888000:CDS | 40.0% | |
| ! | GAAAGGTGTAGACTTAAAGC+AGG | - | chr6_1:51682663-51682682 | None:intergenic | 40.0% |
| ACAGACCCATGAAAAGAAAC+GGG | + | chr6_1:51682765-51682784 | Msa0888000:intron | 40.0% | |
| ! | CTCAACCCGTTTCTTTTCAT+GGG | - | chr6_1:51682773-51682792 | None:intergenic | 40.0% |
| ! | ACTCAACCCGTTTCTTTTCA+TGG | - | chr6_1:51682774-51682793 | None:intergenic | 40.0% |
| TCTAATAACACATCGTGTGC+GGG | - | chr6_1:51682936-51682955 | None:intergenic | 40.0% | |
| GTCTAATAACACATCGTGTG+CGG | - | chr6_1:51682937-51682956 | None:intergenic | 40.0% | |
| GTAGCTAGTTATTTGAGAGC+TGG | - | chr6_1:51683251-51683270 | None:intergenic | 40.0% | |
| TAAAAGAGAGACGGTTAGTG+AGG | - | chr6_1:51683278-51683297 | None:intergenic | 40.0% | |
| TGTCCTAACTGGACAATGTT+AGG | - | chr6_1:51683308-51683327 | None:intergenic | 40.0% | |
| GAATTGGGAATTGTCCTAAC+TGG | - | chr6_1:51683319-51683338 | None:intergenic | 40.0% | |
| ! | ATGTGTTAGTGTCGGGAATT+GGG | - | chr6_1:51683334-51683353 | None:intergenic | 40.0% |
| CCAAATCATGTGTTAGTGTC+GGG | - | chr6_1:51683341-51683360 | None:intergenic | 40.0% | |
| GCCAAATCATGTGTTAGTGT+CGG | - | chr6_1:51683342-51683361 | None:intergenic | 40.0% | |
| ! | TCTTATTTACCACGAGGACA+AGG | + | chr6_1:51683394-51683413 | Msa0888000:intron | 40.0% |
| GAGGACAAGGTGAAAATCTA+GGG | + | chr6_1:51683407-51683426 | Msa0888000:intron | 40.0% | |
| TAATCCCTTGTGATTGAGTG+AGG | + | chr6_1:51683439-51683458 | Msa0888000:intron | 40.0% | |
| ACTACCTCACTCAATCACAA+GGG | - | chr6_1:51683446-51683465 | None:intergenic | 40.0% | |
| TACTACCTCACTCAATCACA+AGG | - | chr6_1:51683447-51683466 | None:intergenic | 40.0% | |
| TTGTGATTGAGTGAGGTAGT+AGG | + | chr6_1:51683446-51683465 | Msa0888000:intron | 40.0% | |
| TTGCTATCACTCCAAGAATC+AGG | + | chr6_1:51683580-51683599 | Msa0888000:intron | 40.0% | |
| AAAAGGTTGCACCTGATTCT+TGG | - | chr6_1:51683594-51683613 | None:intergenic | 40.0% | |
| GAAATGGCCTCACACAAAAA+AGG | - | chr6_1:51683611-51683630 | None:intergenic | 40.0% | |
| GGTCAATCTGGTAACCTAAA+GGG | - | chr6_1:51683657-51683676 | None:intergenic | 40.0% | |
| TCACAATGTTTGGGTCAATC+TGG | - | chr6_1:51683669-51683688 | None:intergenic | 40.0% | |
| AGAAATTCACGAGAAAGGGA+AGG | - | chr6_1:51683699-51683718 | None:intergenic | 40.0% | |
| AGGAATTTCGTGTCAAGTCT+AGG | - | chr6_1:51683735-51683754 | None:intergenic | 40.0% | |
| TTGGATATAAATCATGGCGC+AGG | - | chr6_1:51683755-51683774 | None:intergenic | 40.0% | |
| GCGCCATGATTTATATCCAA+TGG | + | chr6_1:51683755-51683774 | Msa0888000:intron | 40.0% | |
| TGTTTAGCACATGCCATGAT+GGG | - | chr6_1:51683825-51683844 | None:intergenic | 40.0% | |
| TTGTTTAGCACATGCCATGA+TGG | - | chr6_1:51683826-51683845 | None:intergenic | 40.0% | |
| TTCACTGCAATCATTGTGGT+TGG | - | chr6_1:51683900-51683919 | None:intergenic | 40.0% | |
| TACGTATCTACAAAGTCAGC+AGG | - | chr6_1:51684098-51684117 | None:intergenic | 40.0% | |
| !! | GCAGCTTTTCTTTTAGGTCT+GGG | - | chr6_1:51684183-51684202 | None:intergenic | 40.0% |
| !! | AGCTTTTTGAGGATAGGGAT+GGG | - | chr6_1:51684205-51684224 | None:intergenic | 40.0% |
| !! | AAGCTTTTTGAGGATAGGGA+TGG | - | chr6_1:51684206-51684225 | None:intergenic | 40.0% |
| !! | CCACTTTTGGAAGCTTTTTG+AGG | - | chr6_1:51684216-51684235 | None:intergenic | 40.0% |
| CCTCAAAAAGCTTCCAAAAG+TGG | + | chr6_1:51684213-51684232 | Msa0888000:CDS | 40.0% | |
| TATTTGACAGCTCCTGTACT+CGG | + | chr6_1:51684319-51684338 | Msa0888000:intron | 40.0% | |
| GGTGAAGATTGAAAAGATCC+TGG | - | chr6_1:51684352-51684371 | None:intergenic | 40.0% | |
| !! | AGGAGTTTCAAGCATTGGTA+TGG | - | chr6_1:51684413-51684432 | None:intergenic | 40.0% |
| GACACCACAGTGTTCATAAT+AGG | - | chr6_1:51684433-51684452 | None:intergenic | 40.0% | |
| !! | AATTGGTGTTTTGCAACGTG+TGG | - | chr6_1:51684468-51684487 | None:intergenic | 40.0% |
| !! | CTGAAAGTACTCCAAAAGTG+CGG | + | chr6_1:51684675-51684694 | Msa0888000:CDS | 40.0% |
| ! | TATTCAGTCTTGAGCGTTGT+AGG | + | chr6_1:51684999-51685018 | Msa0888000:intron | 40.0% |
| ! | ATTCAGTCTTGAGCGTTGTA+GGG | + | chr6_1:51685000-51685019 | Msa0888000:intron | 40.0% |
| ! | GCCAAATCTCTAGTTGATGT+AGG | - | chr6_1:51685038-51685057 | None:intergenic | 40.0% |
| ATCAACTAGAGATTTGGCCT+AGG | + | chr6_1:51685040-51685059 | Msa0888000:intron | 40.0% | |
| TCAACTTCTCAGAATCGGAT+AGG | - | chr6_1:51685079-51685098 | None:intergenic | 40.0% | |
| CCAACTCAACTTCTCAGAAT+CGG | - | chr6_1:51685084-51685103 | None:intergenic | 40.0% | |
| ! | AGAAGTATGGCCTGGAAAAA+AGG | + | chr6_1:51685179-51685198 | Msa0888000:intron | 40.0% |
| !!! | GCTCTAATTGCCTTTTTTCC+AGG | - | chr6_1:51685192-51685211 | None:intergenic | 40.0% |
| CATTTACAAGCCAGTCATGT+AGG | + | chr6_1:51685217-51685236 | Msa0888000:intron | 40.0% | |
| ! | ACGCTCTAAATGTCTGGTAA+TGG | + | chr6_1:51685336-51685355 | Msa0888000:intron | 40.0% |
| ! | CGCTCTAAATGTCTGGTAAT+GGG | + | chr6_1:51685337-51685356 | Msa0888000:intron | 40.0% |
| TGTAAATGCTCAGTTGCTTC+CGG | - | chr6_1:51685544-51685563 | None:intergenic | 40.0% | |
| ATACCGTCTCAACATCTATG+CGG | - | chr6_1:51685585-51685604 | None:intergenic | 40.0% | |
| CATACATTTGTAAGCACGTG+TGG | - | chr6_1:51685775-51685794 | None:intergenic | 40.0% | |
| CACACGTGCTTACAAATGTA+TGG | + | chr6_1:51685773-51685792 | Msa0888000:intron | 40.0% | |
| !! | GTATGGTCTTGGTTCTGTAT+AGG | + | chr6_1:51685790-51685809 | Msa0888000:intron | 40.0% |
| ! | GGCTAGTTAAATTGATGGAC+AGG | - | chr6_1:51685835-51685854 | None:intergenic | 40.0% |
| CTTACGTGATCCTCAAAATC+TGG | - | chr6_1:51685857-51685876 | None:intergenic | 40.0% | |
| CTTCTACAATGGTCTAGTAG+AGG | - | chr6_1:51685945-51685964 | None:intergenic | 40.0% | |
| ! | CTCTAGGAATGCTTCTACAA+TGG | - | chr6_1:51685956-51685975 | None:intergenic | 40.0% |
| AGAGGTGGTGAGTGAAATTT+GGG | - | chr6_1:51686251-51686270 | None:intergenic | 40.0% | |
| TTTACAACAGAGATGAGAGG+TGG | - | chr6_1:51686266-51686285 | None:intergenic | 40.0% | |
| ACAGGGTTTAAATAGACCTG+AGG | + | chr6_1:51686289-51686308 | Msa0888000:intron | 40.0% | |
| CAGGGTTTAAATAGACCTGA+GGG | + | chr6_1:51686290-51686309 | Msa0888000:intron | 40.0% | |
| AGGGTTTAAATAGACCTGAG+GGG | + | chr6_1:51686291-51686310 | Msa0888000:intron | 40.0% | |
| CATGTCCACGTCATTTAATG+AGG | + | chr6_1:51686506-51686525 | Msa0888000:intron | 40.0% | |
| TGACACCTCATTAAATGACG+TGG | - | chr6_1:51686514-51686533 | None:intergenic | 40.0% | |
| AACCAAATTGAAAGCCGGAA+TGG | + | chr6_1:51686538-51686557 | Msa0888000:intron | 40.0% | |
| ACCAAATTGAAAGCCGGAAT+GGG | + | chr6_1:51686539-51686558 | Msa0888000:intron | 40.0% | |
| !! | ATTTTGGTCTACTCCCATTC+CGG | - | chr6_1:51686555-51686574 | None:intergenic | 40.0% |
| AAATAGGGGGACCAATATTG+CGG | + | chr6_1:51686588-51686607 | Msa0888000:intron | 40.0% | |
| TGGGATTGGATCCATAAGAT+TGG | + | chr6_1:51686832-51686851 | Msa0888000:three_prime_UTR | 40.0% | |
| TGGTTCATGTATTCAGCAAC+TGG | + | chr6_1:51686852-51686871 | Msa0888000:three_prime_UTR | 40.0% | |
| TTGCATTAGGTAAGGTGCAT+TGG | + | chr6_1:51686886-51686905 | Msa0888000:three_prime_UTR | 40.0% | |
| CTAACACAAGATCTTGTGAC+TGG | - | chr6_1:51686934-51686953 | None:intergenic | 40.0% | |
| GTGAATTGGTTGCAAAGGTG+TGG | + | chr6_1:51678651-51678670 | Msa0888000:intron | 45.0% | |
| CATGCTTCCATACTGTCTCT+TGG | + | chr6_1:51679215-51679234 | Msa0888000:intron | 45.0% | |
| AGAACACAACTGCGAGATCT+CGG | - | chr6_1:51679249-51679268 | None:intergenic | 45.0% | |
| GACACTCGTTAGCAAAACCT+TGG | - | chr6_1:51679280-51679299 | None:intergenic | 45.0% | |
| TTTGTTTGTTCGCCAACGCA+AGG | + | chr6_1:51679399-51679418 | Msa0888000:intron | 45.0% | |
| TTGTTTGTTCGCCAACGCAA+GGG | + | chr6_1:51679400-51679419 | Msa0888000:intron | 45.0% | |
| ACAGGGACCAAAACGCAAAT+TGG | - | chr6_1:51679488-51679507 | None:intergenic | 45.0% | |
| !! | ACTGTGTCACTTTGTCCACT+TGG | + | chr6_1:51679619-51679638 | Msa0888000:intron | 45.0% |
| GGGACTAGGAAATTGGATTG+GGG | - | chr6_1:51679855-51679874 | None:intergenic | 45.0% | |
| ! | GGTTGTTTGAGATTGGGACT+AGG | - | chr6_1:51679869-51679888 | None:intergenic | 45.0% |
| ! | CGGTGATGATGATAAGGATG+AGG | - | chr6_1:51679907-51679926 | None:intergenic | 45.0% |
| ! | TAGTGGCGGTGATGATGATA+AGG | - | chr6_1:51679913-51679932 | None:intergenic | 45.0% |
| ! | AGGAGTTGTGGAGTCAGTTT+TGG | + | chr6_1:51680066-51680085 | Msa0888000:intron | 45.0% |
| ! | GGAGTTGTGGAGTCAGTTTT+GGG | + | chr6_1:51680067-51680086 | Msa0888000:intron | 45.0% |
| AAGAACGATGCGGTTTGTGT+GGG | + | chr6_1:51680144-51680163 | Msa0888000:intron | 45.0% | |
| AAGAGGGAATGAAACAGGTG+AGG | + | chr6_1:51680216-51680235 | Msa0888000:intron | 45.0% | |
| ! | GAAGCTAAAGAGTGTGGTGA+TGG | + | chr6_1:51680307-51680326 | Msa0888000:intron | 45.0% |
| CAGACCTGGGAATTGGAATT+TGG | + | chr6_1:51680475-51680494 | Msa0888000:intron | 45.0% | |
| TCTCCCAAATTCCAATTCCC+AGG | - | chr6_1:51680482-51680501 | None:intergenic | 45.0% | |
| GGAATTGGAATTTGGGAGAG+AGG | + | chr6_1:51680483-51680502 | Msa0888000:intron | 45.0% | |
| ATTGGAATTTGGGAGAGAGG+AGG | + | chr6_1:51680486-51680505 | Msa0888000:intron | 45.0% | |
| TCATCAATAAAGTGGGGCCA+AGG | + | chr6_1:51680747-51680766 | Msa0888000:intron | 45.0% | |
| GACAACCAGTTACACTTCGA+GGG | - | chr6_1:51681011-51681030 | None:intergenic | 45.0% | |
| TGACAACCAGTTACACTTCG+AGG | - | chr6_1:51681012-51681031 | None:intergenic | 45.0% | |
| AATGCCCTTAGGACACTTGT+TGG | - | chr6_1:51681281-51681300 | None:intergenic | 45.0% | |
| ! | AACAAGTGTCCTAAGGGCAT+TGG | + | chr6_1:51681280-51681299 | Msa0888000:intron | 45.0% |
| !! | TGTCCTAAGGGCATTGGTTA+AGG | + | chr6_1:51681286-51681305 | Msa0888000:intron | 45.0% |
| GTTCCTTAACCAATGCCCTT+AGG | - | chr6_1:51681292-51681311 | None:intergenic | 45.0% | |
| ATCGTTTAACCAATGCGTCG+GGG | + | chr6_1:51681409-51681428 | Msa0888000:intron | 45.0% | |
| TCAGCATAGCTTACATGCCA+GGG | - | chr6_1:51681709-51681728 | None:intergenic | 45.0% | |
| TTCAGCATAGCTTACATGCC+AGG | - | chr6_1:51681710-51681729 | None:intergenic | 45.0% | |
| TGGCATGTAAGCTATGCTGA+AGG | + | chr6_1:51681709-51681728 | Msa0888000:intron | 45.0% | |
| GGCATGTAAGCTATGCTGAA+GGG | + | chr6_1:51681710-51681729 | Msa0888000:intron | 45.0% | |
| GCATGTAAGCTATGCTGAAG+GGG | + | chr6_1:51681711-51681730 | Msa0888000:intron | 45.0% | |
| TAGTTGTTAAGGAGAGGGAG+TGG | + | chr6_1:51681789-51681808 | Msa0888000:intron | 45.0% | |
| AGTTGTTAAGGAGAGGGAGT+GGG | + | chr6_1:51681790-51681809 | Msa0888000:intron | 45.0% | |
| ACTACTGGTCAACTGGGAAA+CGG | - | chr6_1:51681934-51681953 | None:intergenic | 45.0% | |
| !! | GGAAAGTACTACTGGTCAAC+TGG | - | chr6_1:51681941-51681960 | None:intergenic | 45.0% |
| TGGAGACACCAGAAAGAGAA+AGG | - | chr6_1:51682472-51682491 | None:intergenic | 45.0% | |
| ATTCCCTTATTCCTCTGTCC+AGG | + | chr6_1:51682516-51682535 | Msa0888000:intron | 45.0% | |
| CAAACCTGGACAGAGGAATA+AGG | - | chr6_1:51682523-51682542 | None:intergenic | 45.0% | |
| TTTCCAATCACGGTCAAACC+TGG | - | chr6_1:51682537-51682556 | None:intergenic | 45.0% | |
| !! | AGGAGTGGTTTGTTATTCCC+TGG | + | chr6_1:51683005-51683024 | Msa0888000:intron | 45.0% |
| ! | CATGTGTTAGTGTCGGGAAT+TGG | - | chr6_1:51683335-51683354 | None:intergenic | 45.0% |
| CCCGACACTAACACATGATT+TGG | + | chr6_1:51683338-51683357 | Msa0888000:intron | 45.0% | |
| ! | GGGCAATCTTATTTACCACG+AGG | + | chr6_1:51683388-51683407 | Msa0888000:intron | 45.0% |
| ! | AGATTTTCACCTTGTCCTCG+TGG | - | chr6_1:51683406-51683425 | None:intergenic | 45.0% |
| CGAGGACAAGGTGAAAATCT+AGG | + | chr6_1:51683406-51683425 | Msa0888000:intron | 45.0% | |
| GGCGAGTTAGCCAGATAATT+TGG | + | chr6_1:51683467-51683486 | Msa0888000:intron | 45.0% | |
| !!! | GGTGCAACCTTTTTTGTGTG+AGG | + | chr6_1:51683601-51683620 | Msa0888000:intron | 45.0% |
| TTAGATAGGCTTGGCCCTTT+AGG | + | chr6_1:51683640-51683659 | Msa0888000:intron | 45.0% | |
| GGGTCAATCTGGTAACCTAA+AGG | - | chr6_1:51683658-51683677 | None:intergenic | 45.0% | |
| TGCGTGAAACCCTTAACCAT+TGG | - | chr6_1:51683774-51683793 | None:intergenic | 45.0% | |
| !! | GCTTTTCTTTTAGGTCTGGG+CGG | - | chr6_1:51684180-51684199 | None:intergenic | 45.0% |
| !! | GGCAGCTTTTCTTTTAGGTC+TGG | - | chr6_1:51684184-51684203 | None:intergenic | 45.0% |
| ! | GGATGGGCAGCTTTTCTTTT+AGG | - | chr6_1:51684189-51684208 | None:intergenic | 45.0% |
| TATCCAGGTTCAAGCAAAGC+CGG | - | chr6_1:51684373-51684392 | None:intergenic | 45.0% | |
| TTCACCTTTGGCACTGCAAA+AGG | - | chr6_1:51684638-51684657 | None:intergenic | 45.0% | |
| AAGTCTTGCCTCTCAATGGA+AGG | - | chr6_1:51684736-51684755 | None:intergenic | 45.0% | |
| ATGTAAGCAGGGCAAGGTTA+TGG | + | chr6_1:51684803-51684822 | Msa0888000:intron | 45.0% | |
| TGTAAGCAGGGCAAGGTTAT+GGG | + | chr6_1:51684804-51684823 | Msa0888000:intron | 45.0% | |
| TAGGCAGTTAAGCACTACCT+AGG | - | chr6_1:51685060-51685079 | None:intergenic | 45.0% | |
| ! | CCGATTCTGAGAAGTTGAGT+TGG | + | chr6_1:51685081-51685100 | Msa0888000:intron | 45.0% |
| ACCCACTGTAGCTAGAAGTA+TGG | + | chr6_1:51685166-51685185 | Msa0888000:intron | 45.0% | |
| ! | GCCATACTTCTAGCTACAGT+GGG | - | chr6_1:51685170-51685189 | None:intergenic | 45.0% |
| CCTAACTCAACCTACATGAC+TGG | - | chr6_1:51685230-51685249 | None:intergenic | 45.0% | |
| ! | CCAGTCATGTAGGTTGAGTT+AGG | + | chr6_1:51685227-51685246 | Msa0888000:intron | 45.0% |
| AGAGCGTGATAAAATGTGGG+CGG | - | chr6_1:51685323-51685342 | None:intergenic | 45.0% | |
| CATTGGCAGTGTATTTGACC+CGG | + | chr6_1:51685522-51685541 | Msa0888000:CDS | 45.0% | |
| GTAAATGCTCAGTTGCTTCC+GGG | - | chr6_1:51685543-51685562 | None:intergenic | 45.0% | |
| GAGAGGTGGTGAGTGAAATT+TGG | - | chr6_1:51686252-51686271 | None:intergenic | 45.0% | |
| GGGTTTAAATAGACCTGAGG+GGG | + | chr6_1:51686292-51686311 | Msa0888000:intron | 45.0% | |
| TTTAAATAGACCTGAGGGGG+AGG | + | chr6_1:51686295-51686314 | Msa0888000:intron | 45.0% | |
| ! | GGGGGAGGTGAATGTTATTT+AGG | + | chr6_1:51686310-51686329 | Msa0888000:intron | 45.0% |
| ATGCAGATTGCAATCACCTG+AGG | - | chr6_1:51686340-51686359 | None:intergenic | 45.0% | |
| ! | CATGTCCACTGTGATGATGT+TGG | - | chr6_1:51686490-51686509 | None:intergenic | 45.0% |
| TCCCATTCCGGCTTTCAATT+TGG | - | chr6_1:51686543-51686562 | None:intergenic | 45.0% | |
| CTCATCAGTCATCGGGTAAA+AGG | - | chr6_1:51686687-51686706 | None:intergenic | 45.0% | |
| ! | CTTTTACCCGATGACTGATG+AGG | + | chr6_1:51686685-51686704 | Msa0888000:intron | 45.0% |
| TGGAAAGTTCACAAGCTGAG+AGG | + | chr6_1:51686906-51686925 | Msa0888000:three_prime_UTR | 45.0% | |
| TTTAACGGCGTAGTACTCAC+AGG | - | chr6_1:51687249-51687268 | None:intergenic | 45.0% | |
| !!! | AAATTTTTTGTTTTTTAAAA+AGG | + | chr6_1:51679539-51679558 | Msa0888000:intron | 5.0% |
| !!! | TTTTTAATTATATTTATTTG+AGG | + | chr6_1:51681079-51681098 | Msa0888000:intron | 5.0% |
| !!! | TTTTAATTATATTTATTTGA+GGG | + | chr6_1:51681080-51681099 | Msa0888000:intron | 5.0% |
| !! | AAAATATATATTTATACATA+TGG | - | chr6_1:51684251-51684270 | None:intergenic | 5.0% |
| !!! | TATATTTTTAATAGTTTTAA+CGG | - | chr6_1:51687264-51687283 | None:intergenic | 5.0% |
| AGCATGTCTCTACCGGGTTT+CGG | + | chr6_1:51678351-51678370 | Msa0888000:CDS | 50.0% | |
| AAGACGCCTCCAAGAAGATC+AGG | + | chr6_1:51678400-51678419 | Msa0888000:CDS | 50.0% | |
| GTACGGCTTCCTGATCTTCT+TGG | - | chr6_1:51678412-51678431 | None:intergenic | 50.0% | |
| GCTGTGTGAGTGTTCAGTGA+CGG | + | chr6_1:51678610-51678629 | Msa0888000:intron | 50.0% | |
| GATTAACCGTGTCCCAGTGT+CGG | - | chr6_1:51678875-51678894 | None:intergenic | 50.0% | |
| AGCATGTTGTCAGTTGAGCC+AGG | - | chr6_1:51679201-51679220 | None:intergenic | 50.0% | |
| GCTAATGAATGCCCTTGCGT+TGG | - | chr6_1:51679414-51679433 | None:intergenic | 50.0% | |
| AGGGGAAACAAGAGGAGTTG+TGG | + | chr6_1:51680054-51680073 | Msa0888000:intron | 50.0% | |
| !!! | GTCAGTTTTGGGTTCCCAGT+TGG | + | chr6_1:51680078-51680097 | Msa0888000:intron | 50.0% |
| TCACAACACCAGCACCAACT+GGG | - | chr6_1:51680095-51680114 | None:intergenic | 50.0% | |
| TTCACAACACCAGCACCAAC+TGG | - | chr6_1:51680096-51680115 | None:intergenic | 50.0% | |
| !! | AGTTGGTGCTGGTGTTGTGA+AGG | + | chr6_1:51680095-51680114 | Msa0888000:intron | 50.0% |
| TGTTGTGAAGGAGGAGGAGT+GGG | + | chr6_1:51680107-51680126 | Msa0888000:intron | 50.0% | |
| GAAGAACGATGCGGTTTGTG+TGG | + | chr6_1:51680143-51680162 | Msa0888000:intron | 50.0% | |
| TCACCAAGGGAAGAGGAAGA+CGG | - | chr6_1:51680276-51680295 | None:intergenic | 50.0% | |
| AAGGGTTGTAGATGCAGACC+TGG | + | chr6_1:51680461-51680480 | Msa0888000:intron | 50.0% | |
| AGGGTTGTAGATGCAGACCT+GGG | + | chr6_1:51680462-51680481 | Msa0888000:intron | 50.0% | |
| GTAGATGCAGACCTGGGAAT+TGG | + | chr6_1:51680468-51680487 | Msa0888000:intron | 50.0% | |
| ! | ACTGGGTCACTTTGTCCACT+TGG | - | chr6_1:51680694-51680713 | None:intergenic | 50.0% |
| !! | CCAATTTGGGTTTTGGTCCC+TGG | - | chr6_1:51680827-51680846 | None:intergenic | 50.0% |
| CCAGGGACCAAAACCCAAAT+TGG | + | chr6_1:51680824-51680843 | Msa0888000:intron | 50.0% | |
| TTGGTCCCTCGAAGTGTAAC+TGG | + | chr6_1:51681003-51681022 | Msa0888000:intron | 50.0% | |
| TCTCGCCAACAAGTGTCCTA+AGG | + | chr6_1:51681273-51681292 | Msa0888000:intron | 50.0% | |
| CTCGCCAACAAGTGTCCTAA+GGG | + | chr6_1:51681274-51681293 | Msa0888000:intron | 50.0% | |
| TCGTTTAACCAATGCGTCGG+GGG | + | chr6_1:51681410-51681429 | Msa0888000:intron | 50.0% | |
| GTTGTTAAGGAGAGGGAGTG+GGG | + | chr6_1:51681791-51681810 | Msa0888000:intron | 50.0% | |
| CTACTGGTCAACTGGGAAAC+GGG | - | chr6_1:51681933-51681952 | None:intergenic | 50.0% | |
| GTTGCGGTCCTTTCTCTTTC+TGG | + | chr6_1:51682461-51682480 | Msa0888000:intron | 50.0% | |
| TGTCCAGGTTTGACCGTGAT+TGG | + | chr6_1:51682531-51682550 | Msa0888000:intron | 50.0% | |
| AACACATCGTGTGCGGGAAA+GGG | - | chr6_1:51682930-51682949 | None:intergenic | 50.0% | |
| TAACACATCGTGTGCGGGAA+AGG | - | chr6_1:51682931-51682950 | None:intergenic | 50.0% | |
| ACCACTCCTACTAGAGCAGT+GGG | - | chr6_1:51682994-51683013 | None:intergenic | 50.0% | |
| AACCACTCCTACTAGAGCAG+TGG | - | chr6_1:51682995-51683014 | None:intergenic | 50.0% | |
| GAGAGACGGTTAGTGAGGTT+AGG | - | chr6_1:51683273-51683292 | None:intergenic | 50.0% | |
| ATTTGGCACCCGCGAAACAA+GGG | + | chr6_1:51683355-51683374 | Msa0888000:intron | 50.0% | |
| ! | TTACAGCTCCCTTGTTTCGC+GGG | - | chr6_1:51683366-51683385 | None:intergenic | 50.0% |
| ! | CTTACAGCTCCCTTGTTTCG+CGG | - | chr6_1:51683367-51683386 | None:intergenic | 50.0% |
| CGAAACAAGGGAGCTGTAAG+CGG | + | chr6_1:51683367-51683386 | Msa0888000:intron | 50.0% | |
| GAAACAAGGGAGCTGTAAGC+GGG | + | chr6_1:51683368-51683387 | Msa0888000:intron | 50.0% | |
| TGGTTAAGGGTTTCACGCAG+TGG | + | chr6_1:51683775-51683794 | Msa0888000:intron | 50.0% | |
| TTAAGGGTTTCACGCAGTGG+AGG | + | chr6_1:51683778-51683797 | Msa0888000:intron | 50.0% | |
| TAAGGGTTTCACGCAGTGGA+GGG | + | chr6_1:51683779-51683798 | Msa0888000:intron | 50.0% | |
| !! | GGGTTGGTCTATCAGAACAC+TGG | + | chr6_1:51683799-51683818 | Msa0888000:intron | 50.0% |
| ATCAGAACACTGGCCCATCA+TGG | + | chr6_1:51683809-51683828 | Msa0888000:intron | 50.0% | |
| !! | TTTCTTTTAGGTCTGGGCGG+AGG | - | chr6_1:51684177-51684196 | None:intergenic | 50.0% |
| CCTGGTAATTGTCCGAGTAC+AGG | - | chr6_1:51684334-51684353 | None:intergenic | 50.0% | |
| CCTGTACTCGGACAATTACC+AGG | + | chr6_1:51684331-51684350 | Msa0888000:CDS | 50.0% | |
| TGAACACTGTGGTGTCTTCC+TGG | + | chr6_1:51684437-51684456 | Msa0888000:CDS | 50.0% | |
| TTGCAACGTGTGGTTTGACC+AGG | - | chr6_1:51684458-51684477 | None:intergenic | 50.0% | |
| ! | CATGCCTTTTGCAGTGCCAA+AGG | + | chr6_1:51684631-51684650 | Msa0888000:intron | 50.0% |
| GGTTTCATGTAAGCAGGGCA+AGG | + | chr6_1:51684797-51684816 | Msa0888000:intron | 50.0% | |
| !! | CCTGATAGTGGATCCAGGAT+AGG | - | chr6_1:51685131-51685150 | None:intergenic | 50.0% |
| CCTATCCTGGATCCACTATC+AGG | + | chr6_1:51685128-51685147 | Msa0888000:intron | 50.0% | |
| TGATACAGGTGGCCTGATAG+TGG | - | chr6_1:51685143-51685162 | None:intergenic | 50.0% | |
| CTACAGTGGGTCGATGATAC+AGG | - | chr6_1:51685157-51685176 | None:intergenic | 50.0% | |
| ! | GGCCATACTTCTAGCTACAG+TGG | - | chr6_1:51685171-51685190 | None:intergenic | 50.0% |
| ! | CTGTAGCTAGAAGTATGGCC+TGG | + | chr6_1:51685171-51685190 | Msa0888000:intron | 50.0% |
| GAGCGTGATAAAATGTGGGC+GGG | - | chr6_1:51685322-51685341 | None:intergenic | 50.0% | |
| GGACCGCATAGATGTTGAGA+CGG | + | chr6_1:51685579-51685598 | Msa0888000:CDS | 50.0% | |
| ATAACATTCACCTCCCCCTC+AGG | - | chr6_1:51686308-51686327 | None:intergenic | 50.0% | |
| GACTGCCAACATCATCACAG+TGG | + | chr6_1:51686482-51686501 | Msa0888000:intron | 50.0% | |
| CAGCATCCTCATCAGTCATC+GGG | - | chr6_1:51686694-51686713 | None:intergenic | 50.0% | |
| GCAGCATCCTCATCAGTCAT+CGG | - | chr6_1:51686695-51686714 | None:intergenic | 50.0% | |
| TTCAATGGCTCGTCGTGCAT+CGG | - | chr6_1:51686791-51686810 | None:intergenic | 50.0% | |
| GCGTAGTACTCACAGGTGTT+AGG | - | chr6_1:51687242-51687261 | None:intergenic | 50.0% | |
| CTCACTGTGGATCTGTGACT+TGG | - | chr6_1:51687287-51687306 | None:intergenic | 50.0% | |
| !!! | TTCTGGCGGGTTCGGGTTTT+TGG | - | chr6_1:51678310-51678329 | None:intergenic | 55.0% |
| AAAAACCCGAACCCGCCAGA+AGG | + | chr6_1:51678309-51678328 | Msa0888000:CDS | 55.0% | |
| !! | AGAAACCTTCTGGCGGGTTC+GGG | - | chr6_1:51678317-51678336 | None:intergenic | 55.0% |
| !! | CAGAAACCTTCTGGCGGGTT+CGG | - | chr6_1:51678318-51678337 | None:intergenic | 55.0% |
| TCCAGGCAGAAACCTTCTGG+CGG | - | chr6_1:51678324-51678343 | None:intergenic | 55.0% | |
| GGATCCAGGCAGAAACCTTC+TGG | - | chr6_1:51678327-51678346 | None:intergenic | 55.0% | |
| TCCGACCAGCATGTCTCTAC+CGG | + | chr6_1:51678344-51678363 | Msa0888000:CDS | 55.0% | |
| GAAACCCGGTAGAGACATGC+TGG | - | chr6_1:51678352-51678371 | None:intergenic | 55.0% | |
| CGGCTTCCTGATCTTCTTGG+AGG | - | chr6_1:51678409-51678428 | None:intergenic | 55.0% | |
| !! | ACGGGTACTGACACAGACAC+TGG | + | chr6_1:51678757-51678776 | Msa0888000:intron | 55.0% |
| CACAGACACTGGACACGACA+TGG | + | chr6_1:51678768-51678787 | Msa0888000:intron | 55.0% | |
| TTGTCCACTTGGCATCCACG+TGG | + | chr6_1:51679630-51679649 | Msa0888000:intron | 55.0% | |
| AATGCCACGTGGATGCCAAG+TGG | - | chr6_1:51680676-51680695 | None:intergenic | 55.0% | |
| ! | TTTGGGTTCCCAGTTGGTGC+TGG | + | chr6_1:51680084-51680103 | Msa0888000:intron | 55.0% |
| !! | TGGTGCTGGTGTTGTGAAGG+AGG | + | chr6_1:51680098-51680117 | Msa0888000:intron | 55.0% |
| !! | TGCTGGTGTTGTGAAGGAGG+AGG | + | chr6_1:51680101-51680120 | Msa0888000:intron | 55.0% |
| GTGTTGTGAAGGAGGAGGAG+TGG | + | chr6_1:51680106-51680125 | Msa0888000:intron | 55.0% | |
| AATGGCGTCACCAAGGGAAG+AGG | - | chr6_1:51680283-51680302 | None:intergenic | 55.0% | |
| AATGCCACGTGGATGCCAAG+TGG | + | chr6_1:51680676-51680695 | Msa0888000:intron | 55.0% | |
| TTGTCCACTTGGCATCCACG+TGG | - | chr6_1:51679630-51679649 | None:intergenic | 55.0% | |
| TCCACTCTTGGTTCAAGCCC+TGG | + | chr6_1:51681689-51681708 | Msa0888000:intron | 55.0% | |
| TCACGGTCAAACCTGGACAG+AGG | - | chr6_1:51682530-51682549 | None:intergenic | 55.0% | |
| ACACATCGTGTGCGGGAAAG+GGG | - | chr6_1:51682929-51682948 | None:intergenic | 55.0% | |
| TCATGCCCCACTGCTCTAGT+AGG | + | chr6_1:51682985-51683004 | Msa0888000:intron | 55.0% | |
| CCACTCCTACTAGAGCAGTG+GGG | - | chr6_1:51682993-51683012 | None:intergenic | 55.0% | |
| GATTTGGCACCCGCGAAACA+AGG | + | chr6_1:51683354-51683373 | Msa0888000:intron | 55.0% | |
| GGGCGGAGGAAGATGTTCAT+TGG | - | chr6_1:51684163-51684182 | None:intergenic | 55.0% | |
| !! | TCACCGGCTTTGCTTGAACC+TGG | + | chr6_1:51684367-51684386 | Msa0888000:CDS | 55.0% |
| ! | ACTCCAAAAGTGCGGCCACT+TGG | + | chr6_1:51684683-51684702 | Msa0888000:CDS | 55.0% |
| ! | TCACCAAGTGGCCGCACTTT+TGG | - | chr6_1:51684689-51684708 | None:intergenic | 55.0% |
| CAGTGGGTCGATGATACAGG+TGG | - | chr6_1:51685154-51685173 | None:intergenic | 55.0% | |
| GTGGGCGGGATAACAGATCT+TGG | - | chr6_1:51685308-51685327 | None:intergenic | 55.0% | |
| TAGGGGGACCAATATTGCGG+TGG | + | chr6_1:51686591-51686610 | Msa0888000:intron | 55.0% | |
| ! | TCGTCGTGCATCGGTCTATC+TGG | - | chr6_1:51686782-51686801 | None:intergenic | 55.0% |
| CCAGGCAGAAACCTTCTGGC+GGG | - | chr6_1:51678323-51678342 | None:intergenic | 60.0% | |
| GAGACATGCTGGTCGGATCC+AGG | - | chr6_1:51678341-51678360 | None:intergenic | 60.0% | |
| CCCGGTAGAGACATGCTGGT+CGG | - | chr6_1:51678348-51678367 | None:intergenic | 60.0% | |
| CCGACCAGCATGTCTCTACC+GGG | + | chr6_1:51678345-51678364 | Msa0888000:CDS | 60.0% | |
| GTCTTCCGACGAGTTCACGG+CGG | - | chr6_1:51678385-51678404 | None:intergenic | 60.0% | |
| GGCGTCTTCCGACGAGTTCA+CGG | - | chr6_1:51678388-51678407 | None:intergenic | 60.0% | |
| ACACGACACGTGTCCGACAC+TGG | + | chr6_1:51678859-51678878 | Msa0888000:intron | 60.0% | |
| CACGACACGTGTCCGACACT+GGG | + | chr6_1:51678860-51678879 | Msa0888000:intron | 60.0% | |
| ACGTGTCCGACACTGGGACA+CGG | + | chr6_1:51678866-51678885 | Msa0888000:intron | 60.0% | |
| GGACCGTCTTCCTCTTCCCT+TGG | + | chr6_1:51680270-51680289 | Msa0888000:intron | 60.0% | |
| GCCAGGGCTTGAACCAAGAG+TGG | - | chr6_1:51681693-51681712 | None:intergenic | 60.0% | |
| CCCCACTGCTCTAGTAGGAG+TGG | + | chr6_1:51682990-51683009 | Msa0888000:intron | 60.0% | |
| GGTTTCACGCAGTGGAGGGT+TGG | + | chr6_1:51683783-51683802 | Msa0888000:intron | 60.0% | |
| !! | GGTGGCCTGATAGTGGATCC+AGG | - | chr6_1:51685136-51685155 | None:intergenic | 60.0% |
| CCCGCCAGAAGGTTTCTGCC+TGG | + | chr6_1:51678320-51678339 | Msa0888000:CDS | 65.0% | |
| ACGAGTTCACGGCGGCGAAG+GGG | - | chr6_1:51678377-51678396 | None:intergenic | 65.0% | |
| GACGAGTTCACGGCGGCGAA+GGG | - | chr6_1:51678378-51678397 | None:intergenic | 65.0% | |
| CTTCGCCGCCGTGAACTCGT+CGG | + | chr6_1:51678377-51678396 | Msa0888000:CDS | 65.0% | |
| ATCGAGTGCCCCCGACGCAT+TGG | - | chr6_1:51681421-51681440 | None:intergenic | 65.0% | |
| CGACGAGTTCACGGCGGCGA+AGG | - | chr6_1:51678379-51678398 | None:intergenic | 70.0% | |
| GCGGCGAAGGGGCCGAAACC+CGG | - | chr6_1:51678366-51678385 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 51678225 | 51687318 | 51678225 | ID=Msa0888000;Name=Msa0888000 |
| chr6_1 | mRNA | 51678225 | 51687318 | 51678225 | ID=Msa0888000-mRNA-1;Parent=Msa0888000;Name=Msa0888000-mRNA-1;_AED=0.11;_eAED=0.11;_QI=75|0.85|0.87|1|0.85|0.87|8|492|324 |
| chr6_1 | exon | 51678225 | 51678499 | 51678225 | ID=Msa0888000-mRNA-1:exon:10452;Parent=Msa0888000-mRNA-1 |
| chr6_1 | exon | 51682538 | 51682595 | 51682538 | ID=Msa0888000-mRNA-1:exon:10453;Parent=Msa0888000-mRNA-1 |
| chr6_1 | exon | 51684111 | 51684234 | 51684111 | ID=Msa0888000-mRNA-1:exon:10454;Parent=Msa0888000-mRNA-1 |
| chr6_1 | exon | 51684329 | 51684496 | 51684329 | ID=Msa0888000-mRNA-1:exon:10455;Parent=Msa0888000-mRNA-1 |
| chr6_1 | exon | 51684645 | 51684797 | 51684645 | ID=Msa0888000-mRNA-1:exon:10456;Parent=Msa0888000-mRNA-1 |
| chr6_1 | exon | 51685491 | 51685600 | 51685491 | ID=Msa0888000-mRNA-1:exon:10457;Parent=Msa0888000-mRNA-1 |
| chr6_1 | exon | 51685812 | 51685871 | 51685812 | ID=Msa0888000-mRNA-1:exon:10458;Parent=Msa0888000-mRNA-1 |
| chr6_1 | exon | 51686725 | 51687318 | 51686725 | ID=Msa0888000-mRNA-1:exon:10459;Parent=Msa0888000-mRNA-1 |
| chr6_1 | five_prime_UTR | 51678225 | 51678299 | 51678225 | ID=Msa0888000-mRNA-1:five_prime_utr;Parent=Msa0888000-mRNA-1 |
| chr6_1 | CDS | 51678300 | 51678499 | 51678300 | ID=Msa0888000-mRNA-1:cds;Parent=Msa0888000-mRNA-1 |
| chr6_1 | CDS | 51682538 | 51682595 | 51682538 | ID=Msa0888000-mRNA-1:cds;Parent=Msa0888000-mRNA-1 |
| chr6_1 | CDS | 51684111 | 51684234 | 51684111 | ID=Msa0888000-mRNA-1:cds;Parent=Msa0888000-mRNA-1 |
| chr6_1 | CDS | 51684329 | 51684496 | 51684329 | ID=Msa0888000-mRNA-1:cds;Parent=Msa0888000-mRNA-1 |
| chr6_1 | CDS | 51684645 | 51684797 | 51684645 | ID=Msa0888000-mRNA-1:cds;Parent=Msa0888000-mRNA-1 |
| chr6_1 | CDS | 51685491 | 51685600 | 51685491 | ID=Msa0888000-mRNA-1:cds;Parent=Msa0888000-mRNA-1 |
| chr6_1 | CDS | 51685812 | 51685871 | 51685812 | ID=Msa0888000-mRNA-1:cds;Parent=Msa0888000-mRNA-1 |
| chr6_1 | CDS | 51686725 | 51686826 | 51686725 | ID=Msa0888000-mRNA-1:cds;Parent=Msa0888000-mRNA-1 |
| chr6_1 | three_prime_UTR | 51686827 | 51687318 | 51686827 | ID=Msa0888000-mRNA-1:three_prime_utr;Parent=Msa0888000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
