AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0891490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0891490 MtrunA17_Chr6g0472311 95.946 518 21 0 1 518 1 518 0.0 1040
Msa0891490 MtrunA17_Chr4g0047661 60.000 525 194 7 1 517 1 517 0.0 632
Msa0891490 MtrunA17_Chr4g0058231 60.980 510 180 7 11 515 1 496 0.0 632
Msa0891490 MtrunA17_Chr4g0047641 57.060 517 207 7 5 517 11 516 0.0 612
Msa0891490 MtrunA17_Chr4g0058191 58.135 504 195 5 14 517 1 488 0.0 605
Msa0891490 MtrunA17_Chr4g0047631 57.199 507 204 6 12 518 20 513 0.0 603
Msa0891490 MtrunA17_Chr4g0047691 58.755 514 196 8 5 515 13 513 0.0 599
Msa0891490 MtrunA17_Chr4g0058201 57.582 488 196 3 30 517 17 493 0.0 593
Msa0891490 MtrunA17_Chr3g0116681 42.500 520 277 6 1 517 3 503 9.23e-150 438
Msa0891490 MtrunA17_Chr4g0058281 42.688 506 270 7 3 507 18 504 8.36e-144 423
Msa0891490 MtrunA17_Chr4g0058261 42.887 478 262 5 33 507 54 523 7.57e-139 411
Msa0891490 MtrunA17_Chr3g0101731 42.887 478 258 6 40 515 35 499 2.38e-136 404
Msa0891490 MtrunA17_Chr3g0116741 42.947 475 252 5 40 510 50 509 6.75e-136 403
Msa0891490 MtrunA17_Chr5g0403331 42.578 512 277 6 9 515 3 502 1.40e-134 399
Msa0891490 MtrunA17_Chr5g0445461 42.116 501 268 8 10 507 9 490 1.09e-130 389
Msa0891490 MtrunA17_Chr5g0431641 41.279 516 273 9 3 513 6 496 2.54e-129 385
Msa0891490 MtrunA17_Chr1g0156101 39.673 489 275 4 34 510 25 505 3.86e-129 385
Msa0891490 MtrunA17_Chr5g0445441 42.436 509 271 8 10 515 50 539 5.01e-129 386
Msa0891490 MtrunA17_Chr5g0445451 41.468 504 273 8 10 510 9 493 1.08e-128 384
Msa0891490 MtrunA17_Chr6g0484841 41.649 485 260 9 38 515 34 502 1.57e-128 384
Msa0891490 MtrunA17_Chr3g0101571 40.711 506 287 5 12 517 7 499 2.36e-128 383
Msa0891490 MtrunA17_Chr2g0310391 39.286 504 289 7 12 513 1 489 4.04e-128 382
Msa0891490 MtrunA17_Chr4g0024771 39.689 514 289 8 5 515 3 498 7.43e-128 382
Msa0891490 MtrunA17_Chr5g0445381 41.165 515 282 7 5 516 34 530 1.07e-127 382
Msa0891490 MtrunA17_Chr3g0101581 41.223 507 282 5 16 517 7 502 1.58e-127 381
Msa0891490 MtrunA17_Chr4g0011901 42.500 480 261 6 38 514 26 493 5.64e-127 379
Msa0891490 MtrunA17_Chr3g0101611 40.928 474 267 5 38 510 35 496 6.27e-126 377
Msa0891490 MtrunA17_Chr3g0101691 40.681 499 277 8 14 507 11 495 1.15e-125 376
Msa0891490 MtrunA17_Chr5g0430101 40.194 515 282 9 7 515 5 499 1.64e-125 376
Msa0891490 MtrunA17_Chr1g0162811 40.546 513 276 11 12 515 6 498 3.71e-125 375
Msa0891490 MtrunA17_Chr5g0431671 41.580 481 259 7 31 507 29 491 5.55e-125 375
Msa0891490 MtrunA17_Chr8g0390881 40.820 512 278 10 12 515 8 502 8.30e-125 374
Msa0891490 MtrunA17_Chr6g0484811 39.231 520 294 9 1 515 1 503 2.43e-124 373
Msa0891490 MtrunA17_Chr3g0101711 40.079 509 284 8 8 513 10 500 5.57e-124 372
Msa0891490 MtrunA17_Chr5g0430131 41.075 521 280 11 2 515 1 501 8.94e-124 372
Msa0891490 MtrunA17_Chr5g0403351 39.062 512 293 8 12 518 7 504 1.31e-123 371
Msa0891490 MtrunA17_Chr3g0101721 41.860 473 263 6 40 511 36 497 1.64e-123 371
Msa0891490 MtrunA17_Chr3g0101631 40.200 500 275 8 11 507 8 486 1.94e-123 370
Msa0891490 MtrunA17_Chr5g0403321 40.650 492 276 7 30 515 23 504 2.85e-123 370
Msa0891490 MtrunA17_Chr3g0101811 39.458 517 284 7 11 511 7 510 3.61e-123 370
Msa0891490 MtrunA17_Chr5g0430031 39.883 514 285 9 8 515 7 502 7.17e-123 369
Msa0891490 MtrunA17_Chr2g0310381 38.889 504 291 7 12 513 1 489 1.28e-122 368
Msa0891490 MtrunA17_Chr5g0445531 41.996 481 259 6 32 510 30 492 2.22e-122 368
Msa0891490 MtrunA17_Chr4g0011921 40.864 509 281 7 9 514 2 493 4.50e-122 367
Msa0891490 MtrunA17_Chr5g0430091 39.731 521 288 10 2 515 1 502 1.68e-121 366
Msa0891490 MtrunA17_Chr5g0419691 42.268 485 259 8 36 514 24 493 2.21e-121 365
Msa0891490 MtrunA17_Chr5g0430081 39.494 514 289 8 9 515 2 500 4.09e-121 365
Msa0891490 MtrunA17_Chr3g0101601 40.039 512 278 11 4 511 7 493 1.89e-120 363
Msa0891490 MtrunA17_Chr3g0101671 38.294 504 298 6 6 507 3 495 2.08e-120 363
Msa0891490 MtrunA17_Chr4g0011961 39.370 508 287 7 10 514 3 492 5.64e-120 362
Msa0891490 MtrunA17_Chr3g0101761 41.517 501 281 5 12 511 6 495 4.88e-119 359
Msa0891490 MtrunA17_Chr3g0101701 39.448 507 292 7 14 517 11 505 2.10e-118 358
Msa0891490 MtrunA17_Chr4g0011871 41.564 486 262 8 36 514 24 494 3.59e-118 357
Msa0891490 MtrunA17_Chr3g0101821 40.637 502 284 6 11 511 7 495 4.25e-118 357
Msa0891490 MtrunA17_Chr3g0101831 41.865 504 275 7 10 511 9 496 8.92e-118 356
Msa0891490 MtrunA17_Chr5g0446161 38.835 515 285 10 11 517 8 500 1.51e-117 355
Msa0891490 MtrunA17_Chr8g0361471 38.174 482 282 7 10 489 7 474 4.51e-117 354
Msa0891490 MtrunA17_Chr3g0101651 39.096 509 293 8 12 517 11 505 6.21e-117 354
Msa0891490 MtrunA17_Chr8g0382901 40.198 505 269 8 12 515 1 473 9.63e-117 367
Msa0891490 MtrunA17_Chr8g0382901 39.175 485 277 5 33 515 484 952 1.72e-116 366
Msa0891490 MtrunA17_Chr3g0101751 41.090 477 269 5 40 515 41 506 1.52e-116 353
Msa0891490 MtrunA17_Chr3g0101621 40.631 507 275 12 12 514 6 490 2.05e-116 352
Msa0891490 MtrunA17_Chr8g0344151 37.320 485 284 7 40 518 35 505 2.07e-116 353
Msa0891490 MtrunA17_Chr6g0466331 37.967 482 283 7 10 489 7 474 2.37e-116 352
Msa0891490 MtrunA17_Chr5g0446151 38.866 494 270 9 32 517 32 501 2.58e-116 352
Msa0891490 MtrunA17_Chr5g0445421 39.804 510 263 10 5 510 77 546 3.46e-116 354
Msa0891490 MtrunA17_Chr4g0011981 40.710 479 269 6 39 514 27 493 6.67e-116 351
Msa0891490 MtrunA17_Chr1g0156081 40.123 486 271 5 40 513 55 532 9.56e-116 352
Msa0891490 MtrunA17_Chr5g0406651 42.531 482 262 5 36 514 25 494 1.08e-115 350
Msa0891490 MtrunA17_Chr1g0162801 41.667 480 258 7 42 515 38 501 2.35e-115 350
Msa0891490 MtrunA17_Chr4g0020041 38.224 518 290 10 9 516 6 503 2.81e-115 350
Msa0891490 MtrunA17_Chr6g0465511 37.552 482 285 7 10 489 7 474 9.29e-115 348
Msa0891490 MtrunA17_Chr7g0218601 38.600 500 290 8 22 518 15 500 2.31e-114 347
Msa0891490 MtrunA17_Chr6g0463801 39.457 479 270 7 37 513 33 493 3.07e-114 347
Msa0891490 MtrunA17_Chr3g0101661 38.600 500 289 7 12 507 9 494 1.05e-113 346
Msa0891490 MtrunA17_Chr1g0167321 40.784 510 282 7 9 515 6 498 1.87e-113 345
Msa0891490 MtrunA17_Chr5g0431501 40.166 483 270 9 42 518 34 503 3.09e-113 345
Msa0891490 MtrunA17_Chr5g0431461 40.166 483 270 9 42 518 34 503 3.09e-113 345
Msa0891490 MtrunA17_Chr5g0431511 39.085 481 278 8 42 518 34 503 1.28e-112 343
Msa0891490 MtrunA17_Chr8g0357421 39.526 506 292 5 11 515 7 499 1.42e-112 343
Msa0891490 MtrunA17_Chr3g0101801 38.641 515 296 7 6 513 3 504 2.36e-112 343
Msa0891490 MtrunA17_Chr7g0218611 40.408 490 273 8 32 518 28 501 4.52e-112 341
Msa0891490 MtrunA17_Chr4g0076161 39.810 525 274 13 9 517 5 503 5.47e-112 341
Msa0891490 MtrunA17_Chr8g0344181 36.082 485 290 7 40 518 37 507 7.06e-111 339
Msa0891490 MtrunA17_Chr4g0011881 41.736 484 262 8 36 514 25 493 2.14e-110 337
Msa0891490 MtrunA17_Chr4g0035921 37.577 487 278 10 42 515 38 511 5.11e-110 337
Msa0891490 MtrunA17_Chr8g0357431 39.558 498 288 5 11 507 7 492 1.14e-109 335
Msa0891490 MtrunA17_Chr3g0086661 37.838 481 273 7 50 518 41 507 3.56e-109 334
Msa0891490 MtrunA17_Chr6g0463791 40.421 522 271 14 10 518 6 500 8.07e-109 333
Msa0891490 MtrunA17_Chr3g0086651 37.526 485 273 8 50 518 41 511 2.72e-108 332
Msa0891490 MtrunA17_Chr3g0086691 37.422 481 275 8 50 518 41 507 5.72e-108 331
Msa0891490 MtrunA17_Chr3g0094231 38.855 489 274 9 36 518 31 500 8.03e-108 330
Msa0891490 MtrunA17_Chr4g0061381 37.267 483 271 7 50 518 40 504 1.16e-107 330
Msa0891490 MtrunA17_Chr7g0254641 37.755 490 284 9 40 518 36 515 5.98e-106 326
Msa0891490 MtrunA17_Chr8g0344191 35.597 486 292 7 40 518 68 539 1.31e-104 323
Msa0891490 MtrunA17_Chr3g0094171 36.062 513 299 10 15 518 16 508 5.98e-104 321
Msa0891490 MtrunA17_Chr8g0372251 36.475 488 282 9 42 518 36 506 1.52e-102 317
Msa0891490 MtrunA17_Chr3g0101741 38.462 442 253 5 76 517 1 423 2.35e-102 314
Msa0891490 MtrunA17_Chr2g0280261 39.130 483 276 6 34 515 27 492 4.60e-102 315
Msa0891490 MtrunA17_Chr3g0084921 34.825 514 315 11 11 518 12 511 7.36e-102 315
Msa0891490 MtrunA17_Chr7g0235551 36.550 487 287 10 42 518 34 508 2.04e-101 314
Msa0891490 MtrunA17_Chr5g0405001 34.156 527 307 11 3 518 17 514 9.38e-101 313
Msa0891490 MtrunA17_Chr5g0430111 40.045 442 242 8 2 437 1 425 1.09e-99 307
Msa0891490 MtrunA17_Chr7g0258221 35.833 480 292 9 42 516 35 503 6.68e-97 303
Msa0891490 MtrunA17_Chr4g0030701 35.425 494 305 6 30 513 24 513 6.13e-96 300
Msa0891490 MtrunA17_Chr7g0255531 34.236 517 308 12 12 518 3 497 4.81e-94 295
Msa0891490 MtrunA17_Chr1g0174461 33.540 483 304 8 41 518 35 505 2.63e-93 293
Msa0891490 MtrunA17_Chr8g0356001 33.794 506 312 9 7 506 7 495 3.13e-93 293
Msa0891490 MtrunA17_Chr4g0058211 63.725 204 71 1 314 517 16 216 5.18e-93 282
Msa0891490 MtrunA17_Chr1g0174441 33.951 486 301 9 41 518 54 527 3.21e-92 291
Msa0891490 MtrunA17_Chr1g0174451 33.538 489 305 9 38 518 30 506 4.30e-92 290
Msa0891490 MtrunA17_Chr5g0401681 34.118 510 302 9 13 514 4 487 5.48e-92 290
Msa0891490 MtrunA17_Chr1g0174481 33.268 511 315 9 11 517 11 499 8.25e-92 289
Msa0891490 MtrunA17_Chr1g0156061 37.029 478 236 6 34 510 48 461 1.03e-91 288
Msa0891490 MtrunA17_Chr1g0205361 33.464 511 319 8 10 518 7 498 3.27e-91 287
Msa0891490 MtrunA17_Chr7g0224561 35.569 492 284 13 39 513 29 504 3.49e-90 285
Msa0891490 MtrunA17_Chr4g0057001 34.252 508 297 7 23 518 32 514 7.41e-90 285
Msa0891490 MtrunA17_Chr7g0224551 34.809 497 291 13 39 518 29 509 1.27e-89 284
Msa0891490 MtrunA17_Chr6g0451691 34.280 528 309 13 15 518 14 527 1.45e-88 281
Msa0891490 MtrunA17_Chr7g0265611 34.870 499 302 9 24 513 29 513 4.03e-88 280
Msa0891490 MtrunA17_Chr8g0362701 33.140 516 315 12 10 517 11 504 7.76e-88 279
Msa0891490 MtrunA17_Chr1g0200961 35.340 515 298 9 9 513 4 493 3.49e-87 277
Msa0891490 MtrunA17_Chr1g0174471 32.568 479 307 7 43 516 52 519 4.17e-87 278
Msa0891490 MtrunA17_Chr7g0258211 35.867 513 295 11 7 503 5 499 5.20e-87 277
Msa0891490 MtrunA17_Chr6g0451741 35.108 507 289 12 36 518 55 545 2.42e-86 276
Msa0891490 MtrunA17_Chr1g0160851 31.915 470 297 6 42 506 35 486 1.28e-85 273
Msa0891490 MtrunA17_Chr5g0395321 32.200 500 313 9 10 506 11 487 1.62e-85 274
Msa0891490 MtrunA17_Chr8g0351801 34.534 472 281 9 51 504 44 505 1.85e-85 273
Msa0891490 MtrunA17_Chr6g0451751 33.460 526 312 12 15 518 14 523 2.60e-85 273
Msa0891490 MtrunA17_Chr3g0082701 34.535 527 309 14 12 518 14 524 2.75e-85 273
Msa0891490 MtrunA17_Chr4g0030711 34.000 500 311 8 27 513 23 516 5.56e-85 272
Msa0891490 MtrunA17_Chr8g0355961 34.190 506 310 9 7 506 7 495 1.14e-84 271
Msa0891490 MtrunA17_Chr4g0056951 34.461 473 284 5 53 518 56 509 2.91e-84 270
Msa0891490 MtrunA17_Chr4g0053621 35.259 502 289 10 13 503 4 480 4.62e-84 269
Msa0891490 MtrunA17_Chr5g0395331 32.383 491 308 9 24 506 20 494 8.39e-84 268
Msa0891490 MtrunA17_Chr7g0246221 31.237 493 321 7 16 506 16 492 8.44e-84 268
Msa0891490 MtrunA17_Chr4g0052851 35.443 474 276 10 39 511 31 475 2.37e-83 267
Msa0891490 MtrunA17_Chr8g0362481 32.517 449 282 8 76 517 1 435 4.97e-83 265
Msa0891490 MtrunA17_Chr4g0046631 34.747 495 290 12 38 518 43 518 1.67e-82 266
Msa0891490 MtrunA17_Chr4g0039901 32.803 503 312 9 10 506 6 488 1.89e-82 265
Msa0891490 MtrunA17_Chr6g0451781 35.802 486 281 11 36 503 69 541 2.11e-82 266
Msa0891490 MtrunA17_Chr2g0296651 34.247 511 293 11 1 503 1 476 2.51e-82 264
Msa0891490 MtrunA17_Chr6g0466901 34.766 512 295 14 14 504 12 505 3.58e-82 265
Msa0891490 MtrunA17_Chr2g0314731 33.126 483 305 9 13 491 3 471 4.90e-82 263
Msa0891490 MtrunA17_Chr4g0052861 34.051 511 295 10 12 514 11 487 4.95e-82 263
Msa0891490 MtrunA17_Chr5g0401691 32.000 500 302 9 5 501 27 491 5.86e-82 264
Msa0891490 MtrunA17_Chr2g0304871 31.509 530 325 13 8 518 4 514 3.10e-81 262
Msa0891490 MtrunA17_Chr6g0451641 33.333 528 316 14 10 518 6 516 3.99e-81 262
Msa0891490 MtrunA17_Chr5g0395381 31.526 498 294 9 10 506 11 462 4.68e-81 260
Msa0891490 MtrunA17_Chr1g0207841 33.192 473 299 8 52 513 49 515 1.16e-80 261
Msa0891490 MtrunA17_Chr2g0314721 32.158 482 304 10 13 487 14 479 1.36e-80 260
Msa0891490 MtrunA17_Chr1g0164211 32.842 475 300 8 42 513 32 490 1.45e-80 259
Msa0891490 MtrunA17_Chr8g0339331 31.474 502 317 7 30 518 27 514 2.08e-80 260
Msa0891490 MtrunA17_Chr6g0466941 34.314 510 301 14 14 504 12 506 7.39e-80 259
Msa0891490 MtrunA17_Chr4g0008101 33.208 530 308 16 15 518 14 523 3.53e-79 257
Msa0891490 MtrunA17_Chr4g0046321 32.114 492 298 14 41 513 34 508 7.22e-78 253
Msa0891490 MtrunA17_Chr5g0431591 39.692 325 177 5 190 510 2 311 1.10e-77 246
Msa0891490 MtrunA17_Chr4g0052881 33.074 514 302 10 8 513 8 487 5.29e-77 250
Msa0891490 MtrunA17_Chr4g0046331 31.559 526 319 15 12 513 2 510 1.36e-76 250
Msa0891490 MtrunA17_Chr1g0205371 33.735 498 310 9 12 506 7 487 1.51e-76 249
Msa0891490 MtrunA17_Chr4g0017411 33.820 479 282 11 39 513 28 475 3.15e-76 248
Msa0891490 MtrunA17_Chr4g0039391 32.587 491 299 9 36 516 30 498 8.44e-76 248
Msa0891490 MtrunA17_Chr6g0458561 29.320 515 335 6 17 518 29 527 5.40e-75 246
Msa0891490 MtrunA17_Chr4g0046351 31.707 492 300 15 41 513 34 508 1.06e-74 245
Msa0891490 MtrunA17_Chr7g0246121 31.373 459 297 7 52 506 45 489 1.68e-74 244
Msa0891490 MtrunA17_Chr1g0176831 31.020 490 316 9 4 491 32 501 2.60e-74 244
Msa0891490 MtrunA17_Chr5g0430071 42.154 325 169 6 192 510 39 350 3.24e-74 239
Msa0891490 MtrunA17_Chr8g0339311 31.000 500 313 11 36 518 38 522 7.18e-73 240
Msa0891490 MtrunA17_Chr1g0197871 30.928 485 317 8 16 496 6 476 2.94e-72 238
Msa0891490 MtrunA17_Chr1g0197881 29.857 489 323 8 8 495 5 474 1.16e-70 233
Msa0891490 MtrunA17_Chr1g0197851 30.642 483 318 8 14 495 9 475 2.07e-70 233
Msa0891490 MtrunA17_Chr1g0197891 30.346 491 323 9 6 495 3 475 3.29e-70 232
Msa0891490 MtrunA17_Chr8g0346261 33.264 478 270 17 43 503 86 531 3.40e-70 234
Msa0891490 MtrunA17_Chr7g0246151 29.913 458 307 6 52 506 45 491 1.05e-69 231
Msa0891490 MtrunA17_Chr7g0246181 32.314 458 296 6 52 506 45 491 4.29e-69 230
Msa0891490 MtrunA17_Chr2g0296661 34.183 471 277 8 53 513 44 491 6.67e-69 229
Msa0891490 MtrunA17_Chr1g0200951 33.138 513 303 15 24 518 39 529 3.22e-68 228
Msa0891490 MtrunA17_Chr8g0377341 33.684 475 273 14 45 507 71 515 1.01e-67 227
Msa0891490 MtrunA17_Chr1g0213671 30.785 484 316 9 42 517 35 507 2.80e-67 226
Msa0891490 MtrunA17_Chr5g0419451 31.440 493 305 14 31 516 50 516 4.24e-67 225
Msa0891490 MtrunA17_Chr7g0246131 29.341 501 337 8 9 504 3 491 1.62e-66 223
Msa0891490 MtrunA17_Chr8g0390871 50.472 212 102 3 305 515 15 224 2.33e-66 214
Msa0891490 MtrunA17_Chr3g0101591 49.010 202 102 1 316 517 38 238 6.04e-65 211
Msa0891490 MtrunA17_Chr5g0432751 30.658 486 312 12 42 517 34 504 4.80e-64 216
Msa0891490 MtrunA17_Chr4g0011851 48.780 205 104 1 310 514 9 212 6.70e-63 204
Msa0891490 MtrunA17_Chr5g0446101 34.043 329 199 5 190 517 2 313 5.49e-62 205
Msa0891490 MtrunA17_Chr4g0011941 50.251 199 98 1 317 515 1 198 1.01e-61 201
Msa0891490 MtrunA17_Chr1g0210091 29.291 536 330 14 3 518 31 537 4.41e-61 209
Msa0891490 MtrunA17_Chr1g0160861 32.899 307 185 5 204 506 38 327 1.65e-58 197
Msa0891490 MtrunA17_Chr1g0174431 42.584 209 110 3 317 518 1 206 6.63e-57 189
Msa0891490 MtrunA17_Chr8g0370641 26.306 517 350 11 19 518 17 519 3.99e-56 196
Msa0891490 MtrunA17_Chr8g0370651 26.336 524 355 11 12 518 14 523 9.74e-56 195
Msa0891490 MtrunA17_Chr2g0310351 44.162 197 109 1 317 513 1 196 1.11e-55 185
Msa0891490 MtrunA17_Chr3g0107541 27.216 485 320 11 50 518 59 526 1.40e-54 192
Msa0891490 MtrunA17_Chr3g0107611 26.931 505 330 13 3 485 15 502 1.23e-53 189
Msa0891490 MtrunA17_Chr5g0409051 27.613 507 326 12 34 518 22 509 7.83e-53 187
Msa0891490 MtrunA17_Chr5g0445351 51.807 166 79 1 345 510 52 216 9.30e-52 175
Msa0891490 MtrunA17_Chr6g0451811 40.865 208 117 2 313 518 1 204 2.08e-51 174
Msa0891490 MtrunA17_Chr4g0011861 36.934 287 160 7 36 315 24 296 5.46e-51 176
Msa0891490 MtrunA17_Chr6g0451681 38.865 229 134 3 259 481 215 443 9.82e-51 180
Msa0891490 MtrunA17_Chr6g0451681 36.413 184 106 6 18 194 39 218 2.07e-17 85.1
Msa0891490 MtrunA17_Chr4g0046681 42.654 211 111 3 310 518 28 230 1.66e-50 172
Msa0891490 MtrunA17_Chr1g0198191 26.554 531 343 15 4 517 15 515 3.19e-50 180
Msa0891490 MtrunA17_Chr5g0445751 36.562 320 178 9 2 317 9 307 6.72e-50 174
Msa0891490 MtrunA17_Chr5g0445761 54.651 172 78 0 317 488 1 172 1.09e-49 169
Msa0891490 MtrunA17_Chr4g0074581 27.925 530 354 13 4 517 25 542 1.10e-49 179
Msa0891490 MtrunA17_Chr6g0451771 40.777 206 116 2 313 516 18 219 2.76e-49 169
Msa0891490 MtrunA17_Chr4g0011931 35.220 318 180 8 1 315 1 295 3.85e-49 171
Msa0891490 MtrunA17_Chr5g0445371 37.313 268 125 5 248 514 2 227 4.54e-49 169
Msa0891490 MtrunA17_Chr6g0463621 40.952 210 110 4 317 518 1 204 1.43e-48 166
Msa0891490 MtrunA17_Chr6g0463611 34.740 308 176 7 12 314 21 308 3.68e-46 164
Msa0891490 MtrunA17_Chr2g0314781 45.283 159 86 1 333 491 1 158 3.94e-46 159
Msa0891490 MtrunA17_Chr8g0364651 27.684 531 326 17 9 518 6 499 4.92e-46 168
Msa0891490 MtrunA17_Chr5g0430171 38.462 234 137 3 2 235 1 227 7.81e-46 160
Msa0891490 MtrunA17_Chr2g0280121 27.907 473 299 14 65 518 61 510 5.45e-45 165
Msa0891490 MtrunA17_Chr5g0423621 42.529 174 97 2 333 506 1 171 1.04e-43 152
Msa0891490 MtrunA17_Chr2g0280081 27.673 477 293 13 65 518 558 1005 1.13e-43 166
Msa0891490 MtrunA17_Chr2g0280081 27.273 473 287 13 65 511 57 498 1.60e-40 156
Msa0891490 MtrunA17_Chr2g0280071 27.723 505 302 16 42 516 64 535 4.61e-43 163
Msa0891490 MtrunA17_Chr5g0402981 40.306 196 110 3 326 518 1 192 1.37e-42 150
Msa0891490 MtrunA17_Chr4g0046661 44.886 176 95 1 308 481 16 191 5.91e-42 150
Msa0891490 MtrunA17_Chr2g0334021 26.844 488 316 14 43 516 37 497 1.11e-41 156
Msa0891490 MtrunA17_Chr5g0430041 42.286 175 93 3 343 510 1 174 4.69e-41 145
Msa0891490 MtrunA17_Chr3g0101541 48.905 137 69 1 365 501 1 136 2.01e-40 142
Msa0891490 MtrunA17_Chr8g0387101 28.778 483 281 13 65 518 59 507 5.76e-40 151
Msa0891490 MtrunA17_Chr3g0116731 48.611 144 56 3 368 510 1 127 2.57e-39 139
Msa0891490 MtrunA17_Chr3g0117321 52.991 117 55 0 43 159 9 125 3.21e-39 139
Msa0891490 MtrunA17_Chr2g0280041 26.625 477 298 12 65 518 89 536 4.21e-39 149
Msa0891490 MtrunA17_Chr3g0086681 41.566 166 88 3 361 518 9 173 1.68e-38 139
Msa0891490 MtrunA17_Chr5g0445361 51.145 131 63 1 387 517 8 137 2.21e-38 137
Msa0891490 MtrunA17_Chr4g0046701 44.099 161 84 2 360 518 2 158 2.47e-38 138
Msa0891490 MtrunA17_Chr2g0280011 37.089 213 123 4 313 518 4 212 5.70e-38 138
Msa0891490 MtrunA17_Chr5g0445411 43.030 165 91 2 6 168 11 174 2.04e-37 135
Msa0891490 MtrunA17_Chr4g0030741 31.437 334 205 8 10 340 37 349 9.62e-37 139
Msa0891490 MtrunA17_Chr2g0280061 36.620 213 124 4 313 518 4 212 2.28e-36 134
Msa0891490 MtrunA17_Chr5g0430151 39.080 174 104 2 343 515 1 173 2.80e-36 133
Msa0891490 MtrunA17_Chr3g0117301 45.299 117 64 0 368 484 1 117 3.33e-36 130
Msa0891490 MtrunA17_Chr8g0364631 28.773 497 320 12 35 515 26 504 4.02e-36 140
Msa0891490 MtrunA17_Chr1g0174421 31.761 318 195 9 11 323 23 323 1.01e-35 136
Msa0891490 MtrunA17_Chr5g0413911 36.916 214 130 3 304 512 314 527 2.09e-35 139
Msa0891490 MtrunA17_Chr4g0076171 37.755 196 86 5 333 518 1 170 1.36e-33 125
Msa0891490 MtrunA17_Chr4g0028321 42.424 132 74 2 385 515 25 155 6.65e-32 120
Msa0891490 MtrunA17_Chr5g0402971 31.023 303 188 10 26 318 27 318 8.60e-32 124
Msa0891490 MtrunA17_Chr3g0116721 33.503 197 122 4 148 343 2 190 2.79e-30 117
Msa0891490 MtrunA17_Chr5g0444981 41.361 191 109 3 309 497 2 191 3.46e-30 117
Msa0891490 MtrunA17_Chr5g0431631 43.624 149 80 3 4 150 15 161 6.05e-30 115
Msa0891490 MtrunA17_Chr3g0107551 30.108 186 127 1 313 495 1 186 9.16e-30 116
Msa0891490 MtrunA17_Chr2g0310371 40.541 148 86 2 12 159 1 146 8.90e-29 111
Msa0891490 MtrunA17_Chr3g0105761 31.868 182 116 3 320 495 3 182 2.11e-28 112
Msa0891490 MtrunA17_Chr4g0046691 28.788 264 165 6 34 293 35 279 2.19e-28 115
Msa0891490 MtrunA17_Chr5g0396521 31.930 285 155 8 252 507 286 560 1.55e-27 116
Msa0891490 MtrunA17_Chr6g0477081 29.960 247 142 5 182 428 27 242 4.81e-27 109
Msa0891490 MtrunA17_Chr3g0135841 26.004 473 302 14 43 480 44 503 5.23e-26 111
Msa0891490 MtrunA17_Chr0c19g0493771 25.442 452 300 13 65 505 211 636 7.90e-25 108
Msa0891490 MtrunA17_Chr6g0451801 30.330 333 179 13 12 315 14 322 2.55e-24 103
Msa0891490 MtrunA17_Chr1g0151221 24.066 482 295 18 43 480 41 495 7.25e-24 105
Msa0891490 MtrunA17_Chr1g0179811 25.000 460 279 15 72 505 108 527 7.83e-24 105
Msa0891490 MtrunA17_Chr4g0046671 28.082 292 184 10 33 309 32 312 8.77e-24 102
Msa0891490 MtrunA17_Chr8g0351391 25.641 390 256 11 130 505 130 499 1.10e-22 101
Msa0891490 MtrunA17_Chr4g0030761 36.774 155 72 5 368 513 1 138 1.20e-22 94.4
Msa0891490 MtrunA17_Chr8g0351311 26.031 388 258 11 130 505 130 500 1.34e-22 100
Msa0891490 MtrunA17_Chr1g0204271 26.463 393 250 13 130 505 124 494 3.39e-22 99.8
Msa0891490 MtrunA17_Chr5g0431601 53.012 83 38 1 76 158 1 82 3.82e-22 90.5
Msa0891490 MtrunA17_Chr8g0351401 24.900 498 323 16 44 516 38 509 6.44e-22 99.0
Msa0891490 MtrunA17_Chr1g0207851 28.881 277 179 8 48 315 45 312 7.09e-22 97.1
Msa0891490 MtrunA17_Chr5g0430051 48.810 84 43 0 36 119 33 116 4.53e-21 88.6
Msa0891490 MtrunA17_Chr5g0445341 49.412 85 42 1 76 159 1 85 8.11e-21 87.0
Msa0891490 MtrunA17_Chr8g0372591 32.593 135 88 1 315 449 1 132 9.97e-21 88.6
Msa0891490 MtrunA17_Chr2g0293411 25.155 485 309 19 11 480 8 453 2.64e-20 94.0
Msa0891490 MtrunA17_Chr8g0381571 28.216 241 151 7 244 480 233 455 3.18e-20 93.6
Msa0891490 MtrunA17_Chr8g0381541 28.216 241 151 7 244 480 233 455 3.76e-20 93.6
Msa0891490 MtrunA17_Chr5g0445541 39.098 133 75 3 5 132 3 134 3.95e-20 86.7
Msa0891490 MtrunA17_Chr6g0484771 33.846 130 84 1 76 205 1 128 5.01e-20 86.7
Msa0891490 MtrunA17_Chr6g0457421 30.802 237 138 9 286 516 290 506 9.56e-20 92.4
Msa0891490 MtrunA17_Chr8g0372331 35.938 128 75 3 394 518 1 124 1.29e-19 85.1
Msa0891490 MtrunA17_Chr2g0313781 25.000 380 238 15 130 484 144 501 3.86e-19 90.5
Msa0891490 MtrunA17_Chr4g0063221 22.093 516 351 15 8 496 13 504 1.31e-18 89.0
Msa0891490 MtrunA17_Chr3g0105751 25.472 318 211 7 10 315 19 322 2.13e-18 87.4
Msa0891490 MtrunA17_Chr1g0203141 23.496 349 230 11 163 497 176 501 2.72e-18 87.8
Msa0891490 MtrunA17_Chr1g0193811 22.371 523 329 18 13 489 3 494 4.03e-18 87.4
Msa0891490 MtrunA17_Chr2g0310361 35.938 128 70 3 190 315 21 138 4.07e-18 81.3
Msa0891490 MtrunA17_Chr2g0288661 23.380 432 292 15 65 484 87 491 6.56e-18 86.7
Msa0891490 MtrunA17_Chr6g0479681 25.000 360 217 14 166 497 181 515 6.77e-18 86.7
Msa0891490 MtrunA17_Chr3g0107561 26.578 301 194 9 11 299 19 304 1.10e-17 84.3
Msa0891490 MtrunA17_Chr8g0372711 28.767 219 139 6 270 484 253 458 1.18e-17 85.9
Msa0891490 MtrunA17_Chr3g0141801 23.154 501 325 18 13 497 11 467 1.26e-17 85.5
Msa0891490 MtrunA17_Chr1g0203151 23.392 342 229 11 166 497 179 497 1.40e-17 85.5
Msa0891490 MtrunA17_Chr6g0472221 22.792 351 236 11 161 497 183 512 1.98e-17 85.1
Msa0891490 MtrunA17_Chr4g0038271 26.875 320 202 10 181 480 222 529 2.14e-17 85.1
Msa0891490 MtrunA17_Chr7g0215181 25.344 363 235 14 130 484 148 482 2.38e-17 84.7
Msa0891490 MtrunA17_Chr8g0354571 24.601 439 290 17 58 484 88 497 3.02e-17 84.7
Msa0891490 MtrunA17_Chr1g0154731 23.404 423 286 13 69 484 85 476 5.66e-17 83.6
Msa0891490 MtrunA17_Chr5g0429651 26.437 348 213 12 180 504 176 503 5.69e-17 83.6
Msa0891490 MtrunA17_Chr2g0313811 24.211 380 241 15 130 484 144 501 5.77e-17 84.0
Msa0891490 MtrunA17_Chr2g0293421 24.115 452 287 19 42 480 46 454 1.03e-16 82.8
Msa0891490 MtrunA17_Chr2g0313821 22.977 309 212 10 185 484 198 489 1.06e-16 82.8
Msa0891490 MtrunA17_Chr7g0235261 24.706 425 283 14 72 486 88 485 1.41e-16 82.4
Msa0891490 MtrunA17_Chr7g0248991 33.824 136 88 2 300 435 218 351 1.65e-16 81.3
Msa0891490 MtrunA17_Chr8g0351461 23.848 499 334 17 12 489 13 486 2.24e-16 82.0
Msa0891490 MtrunA17_Chr8g0351421 23.307 502 345 17 9 489 5 487 2.34e-16 81.6
Msa0891490 MtrunA17_Chr4g0067191 23.514 387 253 10 130 484 113 488 2.89e-16 81.6
Msa0891490 MtrunA17_Chr8g0351441 23.280 378 258 11 130 489 123 486 4.51e-16 80.9
Msa0891490 MtrunA17_Chr5g0397971 22.027 513 330 17 15 510 6 465 5.11e-16 80.5
Msa0891490 MtrunA17_Chr1g0163281 23.709 523 320 21 4 487 13 495 5.13e-16 80.9
Msa0891490 MtrunA17_Chr1g0163501 22.476 525 308 20 11 487 2 475 5.19e-16 80.9
Msa0891490 MtrunA17_Chr4g0004601 23.709 426 286 14 72 486 109 506 5.86e-16 80.5
Msa0891490 MtrunA17_Chr1g0163451 27.459 244 165 6 252 487 261 500 6.32e-16 80.5
Msa0891490 MtrunA17_Chr1g0163421 27.160 243 167 6 252 487 277 516 7.99e-16 80.1
Msa0891490 MtrunA17_Chr2g0313831 24.351 308 199 11 190 484 203 489 8.36e-16 80.1
Msa0891490 MtrunA17_Chr3g0119681 23.270 477 299 18 44 481 39 487 1.05e-15 79.7
Msa0891490 MtrunA17_Chr8g0354531 24.706 425 280 16 72 484 222 618 1.57e-15 79.7
Msa0891490 MtrunA17_Chr1g0183611 23.181 371 252 11 130 480 37 394 1.67e-15 78.6
Msa0891490 MtrunA17_Chr5g0443401 29.891 184 115 6 306 484 277 451 2.23e-15 78.6
Msa0891490 MtrunA17_Chr6g0449331 26.210 248 167 7 242 477 238 481 2.54e-15 78.6
Msa0891490 MtrunA17_Chr8g0364081 23.121 346 222 12 165 484 187 514 4.40e-15 77.8
Msa0891490 MtrunA17_Chr3g0107501 28.713 202 135 4 286 483 254 450 4.99e-15 77.4
Msa0891490 MtrunA17_Chr3g0128461 24.768 323 215 9 190 505 217 518 5.21e-15 77.8
Msa0891490 MtrunA17_Chr2g0313801 29.070 172 113 4 317 484 323 489 5.66e-15 77.4
Msa0891490 MtrunA17_Chr2g0313791 23.028 317 212 11 180 484 188 484 8.10e-15 77.0
Msa0891490 MtrunA17_Chr4g0004481 28.571 203 135 7 283 477 258 458 8.93e-15 76.6
Msa0891490 MtrunA17_Chr4g0026941 30.899 178 121 2 306 481 331 508 1.20e-14 76.6
Msa0891490 MtrunA17_Chr1g0164321 24.324 259 165 6 242 480 269 516 1.31e-14 76.6
Msa0891490 MtrunA17_Chr8g0341951 28.837 215 137 6 272 482 244 446 1.51e-14 75.9
Msa0891490 MtrunA17_Chr2g0307291 23.052 308 211 10 186 484 201 491 1.92e-14 75.9
Msa0891490 MtrunA17_Chr8g0362731 29.825 171 117 3 317 486 215 383 2.00e-14 75.1
Msa0891490 MtrunA17_Chr1g0171041 21.195 519 330 17 11 487 2 483 2.09e-14 75.9
Msa0891490 MtrunA17_Chr5g0403931 26.484 219 147 5 271 484 245 454 2.64e-14 75.1
Msa0891490 MtrunA17_Chr6g0451761 27.241 290 159 10 19 293 17 269 3.16e-14 73.2
Msa0891490 MtrunA17_Chr3g0107511 26.829 246 158 5 242 483 223 450 4.94e-14 74.3
Msa0891490 MtrunA17_Chr8g0339861 27.928 222 140 7 244 461 232 437 6.06e-14 74.3
Msa0891490 MtrunA17_Chr1g0163511 29.032 186 117 5 306 480 307 488 9.84e-14 73.6
Msa0891490 MtrunA17_Chr2g0307301 30.120 166 113 3 320 484 328 491 1.12e-13 73.6
Msa0891490 MtrunA17_Chr4g0076181 45.570 79 43 0 76 154 1 79 1.14e-13 68.9
Msa0891490 MtrunA17_Chr7g0227281 24.107 224 154 6 255 472 242 455 1.17e-13 73.2
Msa0891490 MtrunA17_Chr4g0056981 45.070 71 39 0 343 413 1 71 1.20e-13 66.2
Msa0891490 MtrunA17_Chr1g0176851 25.194 258 154 9 128 371 2 234 1.28e-13 70.5
Msa0891490 MtrunA17_Chr1g0163461 26.230 244 168 6 252 487 256 495 1.31e-13 73.2
Msa0891490 MtrunA17_Chr2g0313761 21.780 427 299 13 70 486 85 486 1.63e-13 72.8
Msa0891490 MtrunA17_Chr8g0334941 27.014 211 144 5 283 486 96 303 2.17e-13 71.2
Msa0891490 MtrunA17_Chr8g0372411 29.000 200 136 3 286 482 256 452 2.68e-13 72.0
Msa0891490 MtrunA17_Chr2g0321171 28.161 174 123 2 310 481 294 467 3.39e-13 72.0
Msa0891490 MtrunA17_Chr7g0219961 21.458 480 329 13 14 487 4 441 4.96e-13 71.2
Msa0891490 MtrunA17_Chr8g0371761 26.207 145 93 2 336 466 1 145 5.84e-13 66.6
Msa0891490 MtrunA17_Chr1g0163371 27.957 186 120 5 305 480 10 191 6.97e-13 68.2
Msa0891490 MtrunA17_Chr1g0163211 28.877 187 122 4 304 487 299 477 7.64e-13 70.9
Msa0891490 MtrunA17_Chr8g0354511 23.596 445 303 15 51 484 79 497 8.35e-13 70.9
Msa0891490 MtrunA17_Chr2g0313771 27.711 166 117 3 320 484 333 496 1.28e-12 70.1
Msa0891490 MtrunA17_Chr4g0044851 22.629 464 306 18 30 484 25 444 1.33e-12 70.1
Msa0891490 MtrunA17_Chr5g0403451 26.957 230 132 6 285 484 29 252 1.54e-12 68.2
Msa0891490 MtrunA17_Chr8g0348751 24.710 259 177 6 262 505 251 506 1.92e-12 69.7
Msa0891490 MtrunA17_Chr7g0227291 25.991 227 144 7 256 472 243 455 1.98e-12 69.3
Msa0891490 MtrunA17_Chr8g0383801 49.020 51 24 1 420 468 4 54 3.04e-12 62.8
Msa0891490 MtrunA17_Chr3g0104351 24.138 203 138 4 294 480 283 485 8.41e-12 67.4
Msa0891490 MtrunA17_Chr8g0387001 23.810 210 147 3 309 505 292 501 1.53e-11 66.6
Msa0891490 MtrunA17_Chr7g0262111 22.673 419 290 12 71 484 89 478 2.27e-11 66.2
Msa0891490 MtrunA17_Chr8g0369791 27.684 177 116 4 314 484 269 439 2.75e-11 65.9
Msa0891490 MtrunA17_Chr1g0204241 31.333 150 96 3 358 505 141 285 3.71e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0891490 AT3G48270.1 49.687 479 220 6 38 515 28 486 3.97e-169 487
Msa0891490 AT3G48310.1 50.105 477 217 6 40 515 31 487 5.75e-167 482
Msa0891490 AT3G48280.1 46.654 508 246 7 12 518 6 489 2.64e-166 480
Msa0891490 AT3G48290.1 50.000 478 216 7 40 515 32 488 1.64e-163 473
Msa0891490 AT3G48320.1 48.431 510 236 8 8 515 3 487 2.89e-160 464
Msa0891490 AT3G48300.1 48.842 475 216 7 43 515 31 480 1.83e-159 462
Msa0891490 AT3G48300.2 48.842 475 216 7 43 515 33 482 1.95e-159 462
Msa0891490 AT4G13310.1 47.521 484 239 4 34 515 25 495 3.92e-159 462
Msa0891490 AT3G48290.2 47.421 504 216 8 40 515 32 514 1.78e-157 458
Msa0891490 AT5G24950.1 44.379 507 264 6 12 515 3 494 8.85e-154 448
Msa0891490 AT4G13290.1 46.458 480 234 5 38 515 30 488 2.20e-152 444
Msa0891490 AT2G30770.1 45.094 479 244 6 40 515 32 494 2.30e-144 424
Msa0891490 AT1G11610.1 46.042 480 238 7 40 515 32 494 8.70e-139 410
Msa0891490 AT1G11610.2 46.186 472 233 7 40 507 32 486 2.27e-137 407
Msa0891490 AT5G24960.1 46.311 488 244 6 32 516 24 496 5.90e-137 405
Msa0891490 AT2G30750.1 46.347 479 238 7 40 515 32 494 3.17e-134 398
Msa0891490 AT4G13310.2 48.413 378 182 2 34 410 25 390 3.34e-124 369
Msa0891490 AT5G42590.1 42.292 480 262 4 38 515 29 495 3.91e-122 367
Msa0891490 AT4G31500.1 38.235 510 293 9 18 518 3 499 3.28e-118 357
Msa0891490 AT1G13080.1 39.029 515 277 12 12 513 7 497 5.52e-117 354
Msa0891490 AT3G26280.1 40.373 483 261 11 38 510 29 494 2.13e-115 350
Msa0891490 AT3G26280.2 40.373 483 261 11 38 510 46 511 3.67e-115 350
Msa0891490 AT3G26310.1 38.672 512 277 9 11 513 9 492 4.82e-115 349
Msa0891490 AT1G13110.1 37.549 514 290 9 12 517 13 503 7.48e-114 346
Msa0891490 AT3G26300.1 37.573 511 291 8 10 515 8 495 1.55e-113 345
Msa0891490 AT5G25120.1 36.561 506 288 8 10 510 9 486 3.33e-113 344
Msa0891490 AT3G26320.1 37.810 484 275 10 38 513 28 493 1.33e-112 343
Msa0891490 AT3G26230.1 39.689 514 282 13 15 517 1 497 6.02e-112 341
Msa0891490 AT3G26330.1 38.289 491 273 11 38 518 28 498 8.19e-112 341
Msa0891490 AT3G44250.1 40.787 483 265 8 42 517 29 497 1.12e-111 341
Msa0891490 AT5G57260.1 37.500 480 278 9 42 513 31 496 1.15e-111 341
Msa0891490 AT5G07990.1 35.977 517 304 7 12 518 4 503 9.56e-111 339
Msa0891490 AT5G25140.1 36.620 497 295 6 18 510 6 486 1.16e-109 335
Msa0891490 AT3G26190.1 40.496 484 266 9 42 517 29 498 1.74e-109 335
Msa0891490 AT4G13770.1 35.984 503 301 8 14 510 5 492 1.62e-108 333
Msa0891490 AT1G13090.2 37.660 470 265 8 42 500 29 481 2.56e-108 332
Msa0891490 AT5G25130.1 34.951 515 284 7 10 510 9 486 3.03e-108 332
Msa0891490 AT3G26270.1 38.046 481 274 8 38 510 29 493 3.96e-108 332
Msa0891490 AT3G26170.1 37.622 513 288 12 13 513 5 497 5.34e-108 331
Msa0891490 AT3G26180.1 37.622 513 288 12 13 513 5 497 6.76e-108 331
Msa0891490 AT3G26210.1 38.347 472 272 7 50 515 40 498 7.63e-108 331
Msa0891490 AT3G53280.1 38.958 480 277 5 42 517 29 496 1.67e-107 330
Msa0891490 AT2G24180.1 38.382 482 271 8 39 513 34 496 3.69e-107 329
Msa0891490 AT4G20240.1 44.279 402 207 5 42 441 34 420 9.79e-107 326
Msa0891490 AT5G25180.1 36.667 480 282 7 36 510 24 486 1.37e-106 327
Msa0891490 AT3G26200.1 39.463 484 271 10 42 517 29 498 2.37e-106 327
Msa0891490 AT2G45550.1 35.156 512 305 10 12 513 9 503 2.28e-102 317
Msa0891490 AT3G26160.1 38.066 486 272 11 40 513 29 497 6.32e-102 316
Msa0891490 AT3G26290.1 37.214 481 282 7 43 518 33 498 9.16e-102 315
Msa0891490 AT3G26290.2 37.605 476 277 7 43 513 46 506 1.41e-101 315
Msa0891490 AT5G24960.2 46.597 382 188 4 32 411 24 391 1.58e-101 311
Msa0891490 AT3G26830.1 36.188 467 274 8 42 499 29 480 1.80e-101 314
Msa0891490 AT4G20240.2 45.699 372 186 4 42 412 34 390 2.60e-101 310
Msa0891490 AT1G33720.1 34.816 517 300 9 12 513 9 503 4.10e-101 314
Msa0891490 AT3G26150.1 36.542 509 297 11 14 513 6 497 4.52e-100 311
Msa0891490 AT2G45560.1 35.490 510 306 8 12 513 9 503 2.25e-99 309
Msa0891490 AT3G53300.1 39.175 485 273 10 39 515 26 496 8.67e-99 307
Msa0891490 AT1G13100.1 36.784 454 257 9 51 492 38 473 2.84e-97 303
Msa0891490 AT5G06900.1 36.842 475 276 7 42 513 35 488 4.15e-97 303
Msa0891490 AT2G40890.1 33.398 515 312 11 13 518 4 496 1.08e-96 302
Msa0891490 AT1G01280.1 37.474 483 269 10 50 518 41 504 1.70e-96 302
Msa0891490 AT5G04330.1 36.140 487 287 11 39 515 30 502 4.25e-96 301
Msa0891490 AT3G26220.1 38.031 518 286 12 11 517 7 500 1.07e-95 300
Msa0891490 AT2G02580.1 36.680 518 294 11 12 518 4 498 1.25e-93 294
Msa0891490 AT5G67310.1 34.524 504 300 10 12 512 18 494 5.31e-92 290
Msa0891490 AT2G45580.1 36.076 474 275 9 51 513 48 504 9.41e-92 290
Msa0891490 AT4G36220.1 33.472 481 297 8 49 518 48 516 1.09e-91 290
Msa0891490 AT2G42250.1 35.225 511 295 10 12 503 3 496 3.91e-91 288
Msa0891490 AT2G45570.1 35.654 474 279 9 50 513 47 504 1.78e-89 284
Msa0891490 AT5G35715.1 36.652 442 260 10 76 510 1 429 4.20e-89 280
Msa0891490 AT1G74550.1 32.941 510 308 11 12 518 3 481 6.93e-84 268
Msa0891490 AT1G74540.1 34.337 498 293 13 11 502 2 471 3.73e-83 267
Msa0891490 AT4G12300.1 33.203 512 314 9 13 517 18 508 8.84e-83 266
Msa0891490 AT5G06905.1 33.868 499 280 13 10 484 7 479 2.38e-82 265
Msa0891490 AT3G61040.1 33.895 475 283 9 41 506 33 485 4.02e-82 264
Msa0891490 AT4G37430.1 31.792 519 313 12 11 517 3 492 3.58e-81 262
Msa0891490 AT4G22710.1 32.777 479 290 10 50 518 62 518 7.48e-81 261
Msa0891490 AT4G37400.1 33.475 472 280 10 50 513 40 485 4.18e-80 259
Msa0891490 AT5G44620.1 32.623 469 293 7 50 512 55 506 4.89e-80 259
Msa0891490 AT4G22690.1 32.568 479 291 10 50 518 93 549 1.40e-79 259
Msa0891490 AT4G12320.1 32.879 514 317 12 13 518 18 511 9.07e-79 256
Msa0891490 AT5G36220.1 32.943 513 296 13 14 513 13 490 2.22e-78 254
Msa0891490 AT3G32047.1 31.670 461 279 9 52 501 53 488 2.86e-78 254
Msa0891490 AT3G20110.1 31.337 501 313 12 9 504 10 484 4.83e-78 254
Msa0891490 AT1G33720.4 36.364 385 223 7 136 513 2 371 1.25e-77 249
Msa0891490 AT1G33720.3 36.364 385 223 7 136 513 2 371 1.25e-77 249
Msa0891490 AT1G33720.5 36.364 385 223 7 136 513 2 371 1.25e-77 249
Msa0891490 AT4G37340.1 32.227 512 293 12 9 507 8 478 2.12e-77 252
Msa0891490 AT4G15360.1 32.673 505 304 12 13 504 11 492 7.98e-77 251
Msa0891490 AT3G20940.1 31.237 493 307 13 23 504 27 498 8.04e-77 251
Msa0891490 AT4G37320.1 31.311 511 310 13 12 513 6 484 1.03e-75 247
Msa0891490 AT1G13080.2 35.904 376 209 10 151 513 23 379 1.26e-75 244
Msa0891490 AT4G37370.1 31.335 517 311 13 13 518 6 489 1.82e-75 247
Msa0891490 AT4G31940.1 30.827 532 331 12 8 518 3 518 1.86e-75 248
Msa0891490 AT4G37310.1 33.792 509 291 16 14 506 11 489 6.19e-75 246
Msa0891490 AT5G57220.1 31.557 488 297 9 33 513 22 479 9.87e-75 244
Msa0891490 AT4G37360.1 31.202 516 305 12 9 513 8 484 1.12e-74 244
Msa0891490 AT5G10600.1 31.299 508 315 13 17 516 24 505 2.16e-74 244
Msa0891490 AT3G28740.1 34.801 477 274 12 40 507 38 486 4.14e-74 243
Msa0891490 AT4G12330.1 32.839 472 287 9 50 512 55 505 5.16e-74 243
Msa0891490 AT4G37330.1 32.809 509 303 13 14 513 3 481 5.61e-74 243
Msa0891490 AT3G20140.1 32.041 490 295 13 42 518 43 507 9.77e-74 243
Msa0891490 AT4G37410.1 32.712 483 286 12 42 513 31 485 1.20e-73 242
Msa0891490 AT2G14100.1 31.330 466 284 11 52 505 54 495 2.21e-73 242
Msa0891490 AT3G25180.1 29.714 525 343 11 2 518 1 507 2.24e-73 242
Msa0891490 AT2G45580.2 41.083 314 169 6 204 513 49 350 4.66e-73 236
Msa0891490 AT1G33720.2 34.559 408 224 8 136 513 2 396 4.76e-73 238
Msa0891490 AT3G20090.2 32.533 458 282 11 52 501 54 492 1.07e-72 240
Msa0891490 AT3G20950.1 30.874 515 308 15 10 504 12 498 1.68e-72 240
Msa0891490 AT2G25160.1 31.467 518 308 18 10 506 10 501 4.87e-72 238
Msa0891490 AT3G20130.1 32.075 477 285 12 52 514 53 504 6.73e-72 238
Msa0891490 AT1G33730.1 38.462 325 184 5 191 512 55 366 7.65e-72 233
Msa0891490 AT1G33730.2 38.462 325 184 5 191 512 55 366 7.65e-72 233
Msa0891490 AT4G31970.1 30.132 531 335 12 8 518 3 517 1.03e-71 238
Msa0891490 AT1G50520.1 32.071 449 269 9 50 482 52 480 2.77e-71 237
Msa0891490 AT5G10610.1 31.507 511 315 13 11 516 9 489 1.26e-70 234
Msa0891490 AT4G12310.1 32.563 476 299 11 50 518 53 513 3.75e-70 233
Msa0891490 AT2G27000.1 32.473 465 274 13 52 501 50 489 8.56e-70 232
Msa0891490 AT4G15350.1 31.613 465 285 12 52 504 45 488 1.08e-69 232
Msa0891490 AT3G20120.4 30.885 531 328 11 1 517 1 506 1.20e-69 232
Msa0891490 AT3G20100.1 31.330 466 282 12 50 501 50 491 2.13e-69 231
Msa0891490 AT1G50560.1 32.409 469 277 12 52 504 54 498 5.86e-69 230
Msa0891490 AT2G46660.1 31.599 519 295 17 12 503 29 514 1.16e-68 230
Msa0891490 AT3G52970.2 31.073 531 318 16 15 517 17 527 1.73e-68 229
Msa0891490 AT4G15330.1 29.960 504 312 13 9 501 12 485 4.76e-68 228
Msa0891490 AT3G20080.2 30.309 485 311 10 42 517 43 509 1.26e-67 227
Msa0891490 AT3G20080.1 30.309 485 311 10 42 517 43 509 1.26e-67 227
Msa0891490 AT5G47990.1 31.613 465 283 13 52 504 53 494 4.37e-67 225
Msa0891490 AT3G52970.1 31.619 525 309 16 15 517 17 513 6.45e-67 225
Msa0891490 AT5G09970.1 31.107 524 323 17 8 515 32 533 2.82e-66 224
Msa0891490 AT2G23220.1 31.858 452 275 9 40 482 45 472 2.33e-65 221
Msa0891490 AT4G31950.1 29.213 534 325 14 8 518 3 506 3.48e-65 220
Msa0891490 AT2G23190.1 31.084 489 293 11 4 483 49 502 3.82e-65 221
Msa0891490 AT3G20960.2 31.767 447 278 10 66 504 67 494 6.37e-64 217
Msa0891490 AT1G74110.1 30.403 546 323 18 2 517 18 536 1.89e-63 216
Msa0891490 AT1G66540.1 32.331 399 233 10 124 513 1 371 3.35e-63 211
Msa0891490 AT3G61880.1 31.697 489 293 16 43 517 68 529 1.06e-62 214
Msa0891490 AT3G61880.2 31.493 489 294 15 43 517 68 529 2.39e-62 214
Msa0891490 AT1G13710.1 28.872 523 332 17 8 517 17 512 5.95e-62 211
Msa0891490 AT4G15380.1 29.095 464 286 14 66 514 68 503 1.11e-61 211
Msa0891490 AT5G05260.2 28.967 542 338 16 4 518 1 522 2.25e-60 207
Msa0891490 AT1G28430.1 30.572 507 308 15 9 502 15 490 3.22e-59 204
Msa0891490 AT5G42580.1 30.275 436 259 11 62 484 61 464 4.54e-59 203
Msa0891490 AT2G30490.1 29.730 481 304 13 51 517 43 503 5.32e-58 201
Msa0891490 AT1G01190.2 30.470 489 274 18 39 503 76 522 1.22e-57 201
Msa0891490 AT1G01190.1 30.470 489 274 18 39 503 71 517 1.65e-57 200
Msa0891490 AT3G53290.1 33.180 434 247 9 91 517 8 405 4.82e-57 196
Msa0891490 AT2G05180.1 32.323 396 240 7 52 438 52 428 6.95e-57 196
Msa0891490 AT3G20130.2 30.303 429 261 11 99 514 73 476 2.17e-56 196
Msa0891490 AT3G26180.2 39.179 268 148 6 249 513 108 363 1.34e-55 191
Msa0891490 AT3G26180.2 50.515 97 45 1 13 109 5 98 4.19e-22 98.6
Msa0891490 AT2G27010.1 30.568 458 274 13 52 501 46 467 2.37e-55 193
Msa0891490 AT4G15330.2 27.778 504 295 14 9 501 12 457 2.26e-54 191
Msa0891490 AT5G05260.1 27.963 540 314 15 4 518 1 490 3.35e-54 190
Msa0891490 AT3G10560.1 28.049 492 320 13 14 491 19 490 5.77e-54 190
Msa0891490 AT5G04630.1 28.370 497 308 14 9 483 7 477 7.20e-54 190
Msa0891490 AT1G66540.2 33.819 343 192 10 174 513 2 312 7.74e-54 185
Msa0891490 AT4G39950.1 26.667 525 323 15 7 497 19 515 6.07e-53 188
Msa0891490 AT3G20960.1 31.726 394 242 10 119 504 17 391 8.44e-53 184
Msa0891490 AT4G39950.2 26.667 525 323 15 7 497 59 555 1.37e-52 188
Msa0891490 AT5G36220.2 35.000 340 188 8 180 513 32 344 1.66e-52 182
Msa0891490 AT5G04660.1 28.224 535 344 15 1 518 1 512 1.71e-52 186
Msa0891490 AT1G58260.1 24.089 494 342 11 16 487 11 493 3.61e-52 186
Msa0891490 AT2G22330.1 25.875 514 342 16 7 497 20 517 4.84e-51 183
Msa0891490 AT3G20090.1 33.438 317 189 8 191 501 54 354 6.07e-51 179
Msa0891490 AT2G22330.2 25.875 514 342 16 7 497 43 540 6.20e-51 183
Msa0891490 AT1G64940.1 28.543 494 314 13 42 516 34 507 7.95e-50 179
Msa0891490 AT1G11600.1 28.872 523 320 16 18 512 6 504 3.82e-49 177
Msa0891490 AT2G45580.3 30.997 371 229 8 51 410 48 402 5.25e-49 174
Msa0891490 AT3G20120.2 32.440 336 201 8 190 517 53 370 2.31e-48 172
Msa0891490 AT3G20120.3 32.440 336 201 8 190 517 53 370 2.31e-48 172
Msa0891490 AT3G20120.1 32.440 336 201 8 190 517 53 370 2.31e-48 172
Msa0891490 AT1G79370.1 25.630 476 319 13 39 487 38 505 6.04e-47 172
Msa0891490 AT3G61040.2 29.765 383 239 8 41 414 33 394 6.17e-47 168
Msa0891490 AT1G64950.1 28.745 494 313 13 42 516 33 506 1.40e-46 170
Msa0891490 AT3G20080.4 30.655 336 209 8 190 517 53 372 7.43e-46 165
Msa0891490 AT3G20080.5 30.655 336 209 8 190 517 53 372 7.43e-46 165
Msa0891490 AT3G20080.6 30.655 336 209 8 190 517 53 372 7.43e-46 165
Msa0891490 AT3G20080.3 30.655 336 209 8 190 517 53 372 7.43e-46 165
Msa0891490 AT1G64930.1 28.226 496 314 16 42 516 33 507 1.17e-44 165
Msa0891490 AT3G25180.2 28.426 394 260 10 2 387 1 380 5.12e-44 160
Msa0891490 AT3G10570.1 25.780 481 320 14 53 518 55 513 5.83e-44 163
Msa0891490 AT2G12190.1 28.803 493 312 15 42 514 33 506 6.54e-44 162
Msa0891490 AT2G25160.2 29.975 407 246 15 10 399 10 394 9.93e-44 160
Msa0891490 AT1G16400.1 24.371 517 343 16 9 493 11 511 6.32e-43 160
Msa0891490 AT3G20935.1 32.993 294 151 8 248 516 54 326 6.40e-43 156
Msa0891490 AT5G25900.1 24.299 535 347 12 10 516 2 506 4.08e-41 155
Msa0891490 AT4G20235.1 36.431 269 123 8 12 266 1 235 6.51e-40 148
Msa0891490 AT4G20235.1 39.362 94 56 1 392 484 237 330 5.45e-15 76.6
Msa0891490 AT1G16410.1 24.248 499 330 16 42 508 46 528 3.06e-39 150
Msa0891490 AT1G13090.1 34.310 239 146 5 42 273 29 263 4.75e-39 144
Msa0891490 AT5G61320.1 29.348 460 282 13 65 514 58 484 5.12e-38 146
Msa0891490 AT1G64900.1 27.917 480 304 13 51 516 51 502 7.09e-37 143
Msa0891490 AT5G35917.1 25.498 502 288 16 42 518 43 483 9.62e-37 142
Msa0891490 AT3G03470.1 32.627 236 140 5 272 493 258 488 3.08e-28 118
Msa0891490 AT3G53305.1 47.857 140 67 2 363 502 183 316 1.03e-27 114
Msa0891490 AT3G53305.1 34.524 168 100 5 76 237 1 164 2.32e-18 87.0
Msa0891490 AT4G15110.1 28.521 284 166 6 252 507 294 568 3.35e-26 112
Msa0891490 AT1G31800.1 25.885 452 298 13 65 505 132 557 3.95e-26 112
Msa0891490 AT1G16410.2 23.958 384 255 13 42 404 46 413 7.76e-25 107
Msa0891490 AT3G53130.1 27.622 286 181 9 229 505 259 527 2.83e-23 103
Msa0891490 AT2G26170.1 23.346 514 320 17 3 480 13 488 4.78e-22 99.8
Msa0891490 AT2G26710.1 24.699 498 327 14 12 484 14 488 7.12e-22 99.4
Msa0891490 AT4G27710.1 24.524 420 287 11 72 484 94 490 8.46e-22 99.0
Msa0891490 AT3G14620.1 25.758 330 210 13 186 508 205 506 1.95e-21 97.8
Msa0891490 AT3G26125.1 23.483 379 238 12 133 477 138 498 2.41e-21 97.8
Msa0891490 AT2G45560.2 25.172 290 198 5 12 293 9 287 3.77e-21 94.7
Msa0891490 AT2G45510.1 26.585 410 249 16 130 513 123 506 3.81e-21 97.1
Msa0891490 AT2G44890.1 30.876 217 132 4 310 513 295 506 3.99e-21 97.1
Msa0891490 AT1G57750.1 29.000 200 132 4 309 504 298 491 5.60e-21 96.3
Msa0891490 AT4G20235.2 40.952 105 59 2 167 270 3 105 3.14e-19 84.7
Msa0891490 AT3G14610.1 24.316 329 230 9 186 511 200 512 3.52e-19 90.9
Msa0891490 AT1G13140.1 22.973 370 249 10 133 480 138 493 8.91e-19 89.7
Msa0891490 AT1G65340.1 24.603 252 175 5 242 487 237 479 1.23e-18 89.4
Msa0891490 AT5G35920.1 34.375 128 81 2 374 498 6 133 1.23e-18 83.6
Msa0891490 AT2G44890.2 29.954 217 120 5 310 513 291 488 2.01e-18 88.6
Msa0891490 AT3G14630.1 25.574 305 210 9 186 488 197 486 6.59e-18 87.0
Msa0891490 AT3G14630.2 25.574 305 210 9 186 488 252 541 6.80e-18 87.4
Msa0891490 AT5G02900.1 24.815 270 188 9 232 490 192 457 1.42e-17 85.9
Msa0891490 AT1G47620.1 23.443 273 188 8 248 510 247 508 1.45e-17 85.9
Msa0891490 AT4G15310.1 29.075 227 151 6 283 505 249 469 1.89e-17 85.5
Msa0891490 AT1G13150.1 22.404 366 256 10 133 480 131 486 3.80e-17 84.7
Msa0891490 AT1G19630.1 22.030 463 310 17 42 495 36 456 3.91e-17 84.3
Msa0891490 AT4G39510.1 24.786 234 163 5 281 507 268 495 4.61e-17 84.3
Msa0891490 AT2G45560.3 24.675 231 167 3 12 237 9 237 6.83e-17 80.9
Msa0891490 AT4G39490.1 21.795 468 316 16 50 487 45 492 7.19e-17 84.0
Msa0891490 AT1G57750.2 33.333 141 87 2 309 448 298 432 7.51e-17 83.2
Msa0891490 AT2G29090.3 30.857 175 111 3 314 484 193 361 8.05e-17 82.8
Msa0891490 AT1G55940.2 26.812 276 176 8 236 504 233 489 1.01e-16 83.2
Msa0891490 AT2G29090.2 30.857 175 111 3 314 484 288 456 1.04e-16 83.2
Msa0891490 AT2G29090.1 30.857 175 111 3 314 484 288 456 1.04e-16 83.2
Msa0891490 AT5G24910.1 25.000 308 200 11 189 484 217 505 1.21e-16 83.2
Msa0891490 AT1G13140.2 28.655 171 112 2 320 480 297 467 1.32e-16 83.2
Msa0891490 AT3G14640.1 25.846 325 218 10 186 508 202 505 1.72e-16 82.8
Msa0891490 AT4G32170.1 24.231 260 180 7 235 487 230 479 1.80e-16 82.4
Msa0891490 AT5G23190.1 23.415 410 249 14 133 505 155 536 1.85e-16 82.8
Msa0891490 AT3G14640.2 25.846 325 218 10 186 508 224 527 1.95e-16 82.4
Msa0891490 AT5G38450.1 34.463 177 107 4 313 484 317 489 3.10e-16 82.0
Msa0891490 AT2G26170.2 30.303 198 134 4 286 480 209 405 3.88e-16 81.3
Msa0891490 AT4G39500.2 26.087 184 134 2 306 487 309 492 4.94e-16 81.3
Msa0891490 AT4G39500.1 26.087 184 134 2 306 487 259 442 5.08e-16 80.9
Msa0891490 AT2G46950.1 24.497 298 208 6 190 486 264 545 1.02e-15 80.5
Msa0891490 AT1G19630.3 22.402 433 288 16 42 465 36 429 1.51e-15 79.3
Msa0891490 AT3G44970.1 22.998 487 288 16 33 489 27 456 1.62e-15 79.3
Msa0891490 AT5G52400.1 27.197 239 158 7 268 501 282 509 3.12e-15 79.0
Msa0891490 AT1G67110.1 33.333 147 93 3 339 484 341 483 3.56e-15 78.6
Msa0891490 AT2G23180.1 25.532 188 134 3 306 487 301 488 3.79e-15 78.6
Msa0891490 AT1G55940.1 26.400 250 160 7 236 480 233 463 3.82e-15 78.2
Msa0891490 AT5G52320.2 22.868 258 181 7 236 487 233 478 4.49e-15 78.2
Msa0891490 AT5G52320.1 22.868 258 181 7 236 487 233 478 4.93e-15 78.2
Msa0891490 AT1G24540.1 27.684 177 121 3 320 489 322 498 6.61e-15 77.8
Msa0891490 AT4G00360.1 24.857 350 228 12 178 505 171 507 1.04e-14 77.4
Msa0891490 AT2G42850.1 26.768 198 132 5 302 496 279 466 1.68e-14 76.3
Msa0891490 AT1G63710.1 21.951 533 346 22 16 507 4 507 2.15e-14 76.3
Msa0891490 AT4G19230.1 29.670 182 118 5 306 484 262 436 2.51e-14 75.9
Msa0891490 AT3G30290.1 31.383 188 102 8 314 488 206 379 3.11e-14 75.1
Msa0891490 AT1G11680.1 26.697 221 150 5 275 486 243 460 3.30e-14 75.5
Msa0891490 AT3G50660.1 28.095 210 129 5 290 484 285 487 3.56e-14 75.5
Msa0891490 AT1G78490.1 28.846 208 138 4 282 484 249 451 9.88e-14 73.9
Msa0891490 AT5G48000.1 23.030 495 287 17 28 489 64 497 2.23e-13 72.8
Msa0891490 AT5G48000.2 22.581 496 288 17 28 489 23 456 2.40e-13 72.8
Msa0891490 AT5G48000.4 22.581 496 288 17 28 489 23 456 2.40e-13 72.8
Msa0891490 AT5G48000.7 22.581 496 288 17 28 489 23 456 2.40e-13 72.8
Msa0891490 AT5G48000.6 22.581 496 288 17 28 489 23 456 2.40e-13 72.8
Msa0891490 AT5G48000.5 22.581 496 288 17 28 489 23 456 2.40e-13 72.8
Msa0891490 AT5G48000.3 22.581 496 288 17 28 489 23 456 2.40e-13 72.8
Msa0891490 AT5G45340.1 29.310 174 114 4 314 484 269 436 2.49e-13 72.4
Msa0891490 AT1G05160.2 22.796 465 304 18 31 480 32 456 2.53e-13 72.8
Msa0891490 AT1G05160.1 22.796 465 304 18 31 480 32 456 2.53e-13 72.8
Msa0891490 AT5G24900.2 21.547 362 263 8 130 484 36 383 2.97e-13 72.0
Msa0891490 AT1G73340.1 30.460 174 115 3 313 483 284 454 3.00e-13 72.4
Msa0891490 AT5G24900.1 21.547 362 263 8 130 484 153 500 3.43e-13 72.4
Msa0891490 AT2G46960.2 22.947 414 294 12 72 480 92 485 3.57e-13 72.4
Msa0891490 AT4G15396.1 24.361 509 289 24 9 486 5 448 4.36e-13 72.0
Msa0891490 AT3G56630.1 27.530 247 155 10 256 494 250 480 5.79e-13 71.6
Msa0891490 AT3G19270.2 26.210 248 158 7 244 487 217 443 7.79e-13 71.2
Msa0891490 AT2G46960.1 25.000 292 201 8 190 480 95 369 8.49e-13 70.5
Msa0891490 AT1G19630.2 21.588 403 273 14 42 435 36 404 3.86e-12 68.6
Msa0891490 AT1G69500.1 26.724 232 134 7 310 507 294 523 7.23e-12 68.2
Msa0891490 AT3G13730.2 28.643 199 126 6 287 480 276 463 9.37e-11 64.7

Find 111 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAACTGATTCTTGTTAT+TGG 0.166584 6_1:+66852492 Msa0891490:CDS
AAATGTGAAATTGATATTAA+AGG 0.174597 6_1:+66852551 Msa0891490:CDS
CCAAAGTGAAGTAACATTAA+AGG 0.215098 6_1:-66850769 None:intergenic
TTTCCTAATATTGGAAGTTT+TGG 0.235044 6_1:-66850685 None:intergenic
GTTGCTATTTGAAGTGTTTC+GGG 0.236780 6_1:+66852828 Msa0891490:three_prime_UTR
GCATTACATTTGGGTGTCTT+AGG 0.244292 6_1:-66852250 None:intergenic
TGTTGCTATTTGAAGTGTTT+CGG 0.244691 6_1:+66852827 Msa0891490:three_prime_UTR
CCTCCAAAACTTCCAATATT+AGG 0.245815 6_1:+66850682 Msa0891490:CDS
TCATAGAAAATTTCATCTTT+TGG 0.264684 6_1:+66852754 Msa0891490:CDS
TTCAACTGATTCTTGTTATT+GGG 0.265482 6_1:+66852493 Msa0891490:CDS
GAAAGATGTTTGATATCTTT+TGG 0.270068 6_1:+66850881 Msa0891490:CDS
TGAGCAAGATTTAAACAAAA+TGG 0.271511 6_1:+66852325 Msa0891490:CDS
ACATCTTCTTAGTGCCAAAA+AGG 0.287910 6_1:+66850975 Msa0891490:CDS
GATTCCCTTGGAATTAATAA+AGG 0.289590 6_1:-66852398 None:intergenic
ATCCGGTGGCATTTGTCCTT+TGG 0.295449 6_1:-66851434 None:intergenic
TGATGGAGATTTCCTAATAT+TGG 0.303563 6_1:-66850694 None:intergenic
CACGACACATGTCCGACATT+TGG 0.324995 6_1:-66852885 None:intergenic
GATTGGTTAGGAAAAGTTAA+TGG 0.328209 6_1:+66851252 Msa0891490:CDS
GGAACACAAGTAATAGTTAA+TGG 0.334466 6_1:+66852461 Msa0891490:CDS
TGAAGAGTTTGAATTCCATT+TGG 0.348687 6_1:-66850635 None:intergenic
TTTGTTCTTTAGGATATGTT+TGG 0.349970 6_1:+66852176 Msa0891490:intron
GTAAGGTGATAACAAGTATA+AGG 0.353023 6_1:-66850600 None:intergenic
ATTATGTACCTTGGCTTGAT+TGG 0.363008 6_1:+66851235 Msa0891490:CDS
AACAAATTAGTTAAGTTCAT+TGG 0.366524 6_1:-66851084 None:intergenic
TGAATTTATCAAATTATTAG+TGG 0.367231 6_1:+66852943 Msa0891490:three_prime_UTR
TTGGTTGGAGAGAAGTAAAA+AGG 0.372084 6_1:+66851353 Msa0891490:CDS
GTCACTATTGGAGACAAATA+AGG 0.373007 6_1:+66850938 Msa0891490:CDS
ATCTTGTTCATCAATTTGAT+TGG 0.378383 6_1:+66852666 Msa0891490:CDS
GCTCAGTTATGTGAGTGTTT+TGG 0.382644 6_1:-66852307 None:intergenic
GATATAGCCTCCGCTCCTTA+TGG 0.392173 6_1:+66850916 Msa0891490:CDS
TGACAAATGCAATCGACTAA+TGG 0.394550 6_1:-66850438 None:intergenic
CCGCTCCTTATGGTCACTAT+TGG 0.401692 6_1:+66850926 Msa0891490:CDS
GAAGAGTTTGAATTCCATTT+GGG 0.404738 6_1:-66850634 None:intergenic
CCTTTAATGTTACTTCACTT+TGG 0.406092 6_1:+66850769 Msa0891490:CDS
TACTATATTCACTACCCAAA+TGG 0.407831 6_1:+66850620 Msa0891490:CDS
TGATTGAAAAGATAAGAAAA+TGG 0.411409 6_1:+66851040 Msa0891490:CDS
GTACCTTGGCTTGATTGGTT+AGG 0.414760 6_1:+66851240 Msa0891490:CDS
AGAAACATCGCATATAGCTT+TGG 0.415704 6_1:+66853059 Msa0891490:three_prime_UTR
CAATCCTTAGCACAAATATA+TGG 0.419241 6_1:+66850745 Msa0891490:CDS
GCTGGTAGGAGGGGATGTCC+TGG 0.420087 6_1:+66852602 Msa0891490:CDS
GCTGAGTTGGAAGTGTTGTT+AGG 0.422283 6_1:+66851195 Msa0891490:CDS
CTTTAGGATATGTTTGGTGC+AGG 0.422974 6_1:+66852182 Msa0891490:intron
TCACTTCTTTCTTATATATG+TGG 0.425351 6_1:-66852788 None:intergenic
TTGGACATGTCTGAAACTAC+TGG 0.435492 6_1:+66852722 Msa0891490:CDS
TGCTATGGTTGTTAATGAGT+TGG 0.435654 6_1:+66852634 Msa0891490:CDS
TCACATTTCAAGAATCTCTC+TGG 0.440939 6_1:-66852536 None:intergenic
AGTGGAGAGGGATCAAAGTT+TGG 0.443504 6_1:+66852703 Msa0891490:CDS
TAGAGCTAAAAGAGTGGCTA+AGG 0.448900 6_1:+66851284 Msa0891490:CDS
TATTAAGAACAAGAATGAAT+AGG 0.463142 6_1:-66850572 None:intergenic
AACTAATGATATTGTGTGTA+GGG 0.464049 6_1:+66851116 Msa0891490:CDS
ACCATAGCAAAACTTATTCC+AGG 0.467085 6_1:-66852620 None:intergenic
GAATTTGAGACAACAAGTAT+TGG 0.468946 6_1:-66850799 None:intergenic
TGGAGGAGCATGTTAGTAGT+TGG 0.469183 6_1:+66851334 Msa0891490:CDS
TAAGTTTCGACTTTCGAGAA+AGG 0.471711 6_1:+66853014 Msa0891490:three_prime_UTR
CATCACCTTTATTAATTCCA+AGG 0.472687 6_1:+66852393 Msa0891490:CDS
GTGTCTTGCATTGATTCCCT+TGG 0.474602 6_1:-66852410 None:intergenic
ATGAAGGTGAAGGAAAACTA+AGG 0.477067 6_1:+66851163 Msa0891490:CDS
GAATAGGTTCCATGTAGAAA+AGG 0.479807 6_1:-66850556 None:intergenic
ATGGGCTATGACATTTCAGC+TGG 0.484548 6_1:+66852440 Msa0891490:CDS
CTACCCTTGCAGTCTTAGAA+TGG 0.485230 6_1:+66852213 Msa0891490:CDS
GGAGCATGTTAGTAGTTGGT+TGG 0.486070 6_1:+66851338 Msa0891490:CDS
TGTTCTATCAATCTCAAATC+CGG 0.486530 6_1:-66851451 None:intergenic
TGTCTCCAATAGTGACCATA+AGG 0.489012 6_1:-66850931 None:intergenic
AAGGGAGGCAGTGGCTGAGT+TGG 0.494821 6_1:+66851182 Msa0891490:CDS
GGAAAGAGATATAGTGATGA+AGG 0.494966 6_1:+66851147 Msa0891490:CDS
AGGACCATATATTTGTGCTA+AGG 0.500504 6_1:-66850749 None:intergenic
TACCCTTGCAGTCTTAGAAT+GGG 0.504494 6_1:+66852214 Msa0891490:CDS
GAGTGAAAGTGGCTAGTTGA+TGG 0.505748 6_1:-66850711 None:intergenic
TTTGGGTAGTGAATATAGTA+AGG 0.518276 6_1:-66850617 None:intergenic
AATCATCAAGGCTTTGATCA+TGG 0.520063 6_1:+66851473 Msa0891490:CDS
CTTGGAATTAATAAAGGTGA+TGG 0.522156 6_1:-66852392 None:intergenic
CCCCTCCTACCAGCACCAAA+AGG 0.522296 6_1:-66852593 None:intergenic
TAGAAGCTTCTTATATAGAG+TGG 0.527186 6_1:-66853037 None:intergenic
CAACTAATGATATTGTGTGT+AGG 0.527817 6_1:+66851115 Msa0891490:CDS
ATCACCTTTATTAATTCCAA+GGG 0.528650 6_1:+66852394 Msa0891490:CDS
GACATGTGTCGTGTTCGATA+CGG 0.529530 6_1:+66852895 Msa0891490:three_prime_UTR
AAGTTTGTGGTGAGTGAAAG+TGG 0.533748 6_1:-66850722 None:intergenic
GTGCTAAGGATTGAAGTTTG+TGG 0.536651 6_1:-66850735 None:intergenic
CTCTCTGGTTGAAATTCTAG+TGG 0.547613 6_1:-66852521 None:intergenic
ATTGCCTAGTGGAGTGGAGA+GGG 0.560923 6_1:+66852691 Msa0891490:CDS
TGATCCCTCTCCACTCCACT+AGG 0.571570 6_1:-66852695 None:intergenic
TATGAAGCGCAGACACTCCT+CGG 0.581120 6_1:+66852852 Msa0891490:three_prime_UTR
AGATATAGTGATGAAGGTGA+AGG 0.585028 6_1:+66851153 Msa0891490:CDS
TTGCCCATTCTAAGACTGCA+AGG 0.585929 6_1:-66852217 None:intergenic
AGGAAAACTAAGGGAGGCAG+TGG 0.588893 6_1:+66851173 Msa0891490:CDS
GGAATTAATAAAGGTGATGG+TGG 0.591974 6_1:-66852389 None:intergenic
TGATGCACGGATACAAACAC+TGG 0.592611 6_1:-66852991 None:intergenic
GATTGATAGAACAATCATCA+AGG 0.599177 6_1:+66851461 Msa0891490:CDS
TTTGATTGGTCATTGCCTAG+TGG 0.602501 6_1:+66852680 Msa0891490:CDS
TGGACATGTCTGAAACTACT+GGG 0.609095 6_1:+66852723 Msa0891490:CDS
ATATCAAACATCTTTCTATG+TGG 0.610671 6_1:-66850874 None:intergenic
TTTCCTAACCAATCAAGCCA+AGG 0.610715 6_1:-66851243 None:intergenic
GTCACAAGTCTTAGCATGAG+TGG 0.611705 6_1:-66850472 None:intergenic
TCACAAGTCTTAGCATGAGT+GGG 0.612533 6_1:-66850471 None:intergenic
TTGGTCATTGCCTAGTGGAG+TGG 0.613213 6_1:+66852685 Msa0891490:CDS
ATTGTGTGTAGGGCAACACT+TGG 0.615399 6_1:+66851126 Msa0891490:CDS
CATTGCCTAGTGGAGTGGAG+AGG 0.616377 6_1:+66852690 Msa0891490:CDS
ATCCAAAGGACAAATGCCAC+CGG 0.626863 6_1:+66851432 Msa0891490:CDS
AATGTTAAGCAAGTAGAATG+TGG 0.628244 6_1:+66853113 Msa0891490:three_prime_UTR
AAGTCGAAACTTATGATGCA+CGG 0.644332 6_1:-66853004 None:intergenic
GAATTAATAAAGGTGATGGT+GGG 0.644975 6_1:-66852388 None:intergenic
TGAAGGTGAAGGAAAACTAA+GGG 0.647626 6_1:+66851164 Msa0891490:CDS
TGCCCATTCTAAGACTGCAA+GGG 0.660377 6_1:-66852216 None:intergenic
GGTTAGACGTGTCCAAATGT+CGG 0.666470 6_1:+66852873 Msa0891490:three_prime_UTR
ACAGCATGAAGTGAGAAATG+TGG 0.674695 6_1:+66852280 Msa0891490:CDS
CCAATAGTGACCATAAGGAG+CGG 0.683742 6_1:-66850926 None:intergenic
TCTATCAATCTCAAATCCGG+TGG 0.691146 6_1:-66851448 None:intergenic
GTATAGTAGAGCTAAAAGAG+TGG 0.692289 6_1:+66851278 Msa0891490:CDS
ATAGTGACCATAAGGAGCGG+AGG 0.692428 6_1:-66850923 None:intergenic
CATTTGGACACGTCTAACCG+AGG 0.712177 6_1:-66852869 None:intergenic
AGGTGAAGGAAAACTAAGGG+AGG 0.715037 6_1:+66851167 Msa0891490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTATTTTTGTAATATTTTTT+TGG + chr6_1:66851899-66851918 Msa0891490:intron 10.0%
!! TAAAAATAATAGAAAATTTG+AGG - chr6_1:66852009-66852028 None:intergenic 10.0%
!! AAAAAAAAAAAAATTACCTA+TGG - chr6_1:66852096-66852115 None:intergenic 10.0%
!!! TTTTTTTAAATCTATTTGAT+AGG + chr6_1:66852109-66852128 Msa0891490:intron 10.0%
!! AAATGTGAAATTGATATTAA+AGG + chr6_1:66852551-66852570 Msa0891490:CDS 15.0%
!! TGAATTTATCAAATTATTAG+TGG + chr6_1:66852943-66852962 Msa0891490:three_prime_UTR 15.0%
!!! ACATTAGTATTTTTTCTATT+TGG - chr6_1:66853098-66853117 None:intergenic 15.0%
!! TATTAAGAACAAGAATGAAT+AGG - chr6_1:66850575-66850594 None:intergenic 20.0%
!! TGATTGAAAAGATAAGAAAA+TGG + chr6_1:66851040-66851059 Msa0891490:CDS 20.0%
!! AACAAATTAGTTAAGTTCAT+TGG - chr6_1:66851087-66851106 None:intergenic 20.0%
!! AATCGAATTGTTTAATGTTA+TGG - chr6_1:66851547-66851566 None:intergenic 20.0%
!! ACATCAAAATAAGATTGTTT+AGG - chr6_1:66851637-66851656 None:intergenic 20.0%
!! GTATAAATAATCAAGAGATT+TGG - chr6_1:66851698-66851717 None:intergenic 20.0%
!! ATATTACAAAAATACTAGAG+TGG - chr6_1:66851894-66851913 None:intergenic 20.0%
!!! TTAAAAAGTTTTTGAGCAAA+AGG - chr6_1:66851981-66852000 None:intergenic 20.0%
!!! AAGTTGAATTTTTGTTCTTT+AGG + chr6_1:66852166-66852185 Msa0891490:intron 20.0%
!!! TCATAGAAAATTTCATCTTT+TGG + chr6_1:66852754-66852773 Msa0891490:CDS 20.0%
!! TTTCCTAATATTGGAAGTTT+TGG - chr6_1:66850688-66850707 None:intergenic 25.0%
! ATATCAAACATCTTTCTATG+TGG - chr6_1:66850877-66850896 None:intergenic 25.0%
!! GAAAGATGTTTGATATCTTT+TGG + chr6_1:66850881-66850900 Msa0891490:CDS 25.0%
!! ATGTTTGATATCTTTTGGTA+TGG + chr6_1:66850886-66850905 Msa0891490:CDS 25.0%
!! ACTAAAAGATTGAACCTTTT+TGG - chr6_1:66850992-66851011 None:intergenic 25.0%
!!! TTTTAGTTTACTAAGAGAAG+AGG + chr6_1:66851005-66851024 Msa0891490:CDS 25.0%
! AACTAATGATATTGTGTGTA+GGG + chr6_1:66851116-66851135 Msa0891490:CDS 25.0%
!!! TAAGGTATTTGATGAGTTTT+TGG + chr6_1:66851302-66851321 Msa0891490:CDS 25.0%
! TAATACATCTTCAAGATTGT+AGG + chr6_1:66851503-66851522 Msa0891490:intron 25.0%
!!! TACATATGGTTTTAGGTTTA+AGG - chr6_1:66851740-66851759 None:intergenic 25.0%
!! TCAAAACTACATATGGTTTT+AGG - chr6_1:66851747-66851766 None:intergenic 25.0%
! TAAGAAGTCAAAACTACATA+TGG - chr6_1:66851754-66851773 None:intergenic 25.0%
!!! AAATTAATCCGTTTCTAGTT+AGG + chr6_1:66852030-66852049 Msa0891490:intron 25.0%
! TGGAATTGTTAGTTATATGT+TGG - chr6_1:66852059-66852078 None:intergenic 25.0%
!!! TTTGTTCTTTAGGATATGTT+TGG + chr6_1:66852176-66852195 Msa0891490:intron 25.0%
!! GTAGTTTTTGCATTACATTT+GGG - chr6_1:66852262-66852281 None:intergenic 25.0%
!! TGTAGTTTTTGCATTACATT+TGG - chr6_1:66852263-66852282 None:intergenic 25.0%
! TGAGCAAGATTTAAACAAAA+TGG + chr6_1:66852325-66852344 Msa0891490:CDS 25.0%
! ATCACCTTTATTAATTCCAA+GGG + chr6_1:66852394-66852413 Msa0891490:CDS 25.0%
! AATGCAAGACACAAAAATTA+TGG + chr6_1:66852421-66852440 Msa0891490:CDS 25.0%
! ATGCAAGACACAAAAATTAT+GGG + chr6_1:66852422-66852441 Msa0891490:CDS 25.0%
!! TTTCAACTGATTCTTGTTAT+TGG + chr6_1:66852492-66852511 Msa0891490:CDS 25.0%
!!! TTCAACTGATTCTTGTTATT+GGG + chr6_1:66852493-66852512 Msa0891490:CDS 25.0%
!!! GATTTTGATTTGATTCCTTT+TGG + chr6_1:66852578-66852597 Msa0891490:CDS 25.0%
! ATCTTGTTCATCAATTTGAT+TGG + chr6_1:66852666-66852685 Msa0891490:CDS 25.0%
! TCACTTCTTTCTTATATATG+TGG - chr6_1:66852791-66852810 None:intergenic 25.0%
GTAAGGTGATAACAAGTATA+AGG - chr6_1:66850603-66850622 None:intergenic 30.0%
TTTGGGTAGTGAATATAGTA+AGG - chr6_1:66850620-66850639 None:intergenic 30.0%
TACTATATTCACTACCCAAA+TGG + chr6_1:66850620-66850639 Msa0891490:CDS 30.0%
GAAGAGTTTGAATTCCATTT+GGG - chr6_1:66850637-66850656 None:intergenic 30.0%
TGAAGAGTTTGAATTCCATT+TGG - chr6_1:66850638-66850657 None:intergenic 30.0%
TGATGGAGATTTCCTAATAT+TGG - chr6_1:66850697-66850716 None:intergenic 30.0%
CAATCCTTAGCACAAATATA+TGG + chr6_1:66850745-66850764 Msa0891490:CDS 30.0%
CCAAAGTGAAGTAACATTAA+AGG - chr6_1:66850772-66850791 None:intergenic 30.0%
! CCTTTAATGTTACTTCACTT+TGG + chr6_1:66850769-66850788 Msa0891490:CDS 30.0%
! GAATTTGAGACAACAAGTAT+TGG - chr6_1:66850802-66850821 None:intergenic 30.0%
! AAACAAGGTCATGTGTTTTT+AGG - chr6_1:66850843-66850862 None:intergenic 30.0%
CAACTAATGATATTGTGTGT+AGG + chr6_1:66851115-66851134 Msa0891490:CDS 30.0%
! GATTGGTTAGGAAAAGTTAA+TGG + chr6_1:66851252-66851271 Msa0891490:CDS 30.0%
! CAAAATCATTTTGTCCTTCA+TGG - chr6_1:66851395-66851414 None:intergenic 30.0%
! TGAAGGACAAAATGATTTTG+TGG + chr6_1:66851395-66851414 Msa0891490:CDS 30.0%
! ATTTTGTGGATGTTTTGCTT+TGG + chr6_1:66851409-66851428 Msa0891490:CDS 30.0%
TGTTCTATCAATCTCAAATC+CGG - chr6_1:66851454-66851473 None:intergenic 30.0%
GATTGATAGAACAATCATCA+AGG + chr6_1:66851461-66851480 Msa0891490:CDS 30.0%
!!! ATATGGTTTTAGGTTTAAGG+AGG - chr6_1:66851737-66851756 None:intergenic 30.0%
! GAATTAATAAAGGTGATGGT+GGG - chr6_1:66852391-66852410 None:intergenic 30.0%
CTTGGAATTAATAAAGGTGA+TGG - chr6_1:66852395-66852414 None:intergenic 30.0%
CATCACCTTTATTAATTCCA+AGG + chr6_1:66852393-66852412 Msa0891490:CDS 30.0%
GATTCCCTTGGAATTAATAA+AGG - chr6_1:66852401-66852420 None:intergenic 30.0%
GGAACACAAGTAATAGTTAA+TGG + chr6_1:66852461-66852480 Msa0891490:CDS 30.0%
!! TGTTGCTATTTGAAGTGTTT+CGG + chr6_1:66852827-66852846 Msa0891490:three_prime_UTR 30.0%
TAGAAGCTTCTTATATAGAG+TGG - chr6_1:66853040-66853059 None:intergenic 30.0%
AATGTTAAGCAAGTAGAATG+TGG + chr6_1:66853113-66853132 Msa0891490:three_prime_UTR 30.0%
TGACAAATGCAATCGACTAA+TGG - chr6_1:66850441-66850460 None:intergenic 35.0%
! CTAATGTTGCCTTTTCTACA+TGG + chr6_1:66850547-66850566 Msa0891490:exon 35.0%
GAATAGGTTCCATGTAGAAA+AGG - chr6_1:66850559-66850578 None:intergenic 35.0%
!! CCTAATATTGGAAGTTTTGG+AGG - chr6_1:66850685-66850704 None:intergenic 35.0%
CCTCCAAAACTTCCAATATT+AGG + chr6_1:66850682-66850701 Msa0891490:CDS 35.0%
AGGACCATATATTTGTGCTA+AGG - chr6_1:66850752-66850771 None:intergenic 35.0%
GTGGTCTATTGCAAAAAACA+AGG - chr6_1:66850858-66850877 None:intergenic 35.0%
GTCACTATTGGAGACAAATA+AGG + chr6_1:66850938-66850957 Msa0891490:CDS 35.0%
ACATCTTCTTAGTGCCAAAA+AGG + chr6_1:66850975-66850994 Msa0891490:CDS 35.0%
GGAAAGAGATATAGTGATGA+AGG + chr6_1:66851147-66851166 Msa0891490:CDS 35.0%
AGATATAGTGATGAAGGTGA+AGG + chr6_1:66851153-66851172 Msa0891490:CDS 35.0%
ATGAAGGTGAAGGAAAACTA+AGG + chr6_1:66851163-66851182 Msa0891490:CDS 35.0%
TGAAGGTGAAGGAAAACTAA+GGG + chr6_1:66851164-66851183 Msa0891490:CDS 35.0%
! TTGTTAGGTGCTTGTGTTTT+AGG + chr6_1:66851210-66851229 Msa0891490:CDS 35.0%
! TGTTAGGTGCTTGTGTTTTA+GGG + chr6_1:66851211-66851230 Msa0891490:CDS 35.0%
!! TTTTAGGGGATTATGTACCT+TGG + chr6_1:66851226-66851245 Msa0891490:CDS 35.0%
! ATTATGTACCTTGGCTTGAT+TGG + chr6_1:66851235-66851254 Msa0891490:CDS 35.0%
GTATAGTAGAGCTAAAAGAG+TGG + chr6_1:66851278-66851297 Msa0891490:CDS 35.0%
!! TGAGTTTTTGGATGAAGTTG+TGG + chr6_1:66851314-66851333 Msa0891490:CDS 35.0%
TTGGTTGGAGAGAAGTAAAA+AGG + chr6_1:66851353-66851372 Msa0891490:CDS 35.0%
TGGTTGGAGAGAAGTAAAAA+GGG + chr6_1:66851354-66851373 Msa0891490:CDS 35.0%
!! ATGTTTTGCTTTGGATCCAA+AGG + chr6_1:66851418-66851437 Msa0891490:CDS 35.0%
! AATCATCAAGGCTTTGATCA+TGG + chr6_1:66851473-66851492 Msa0891490:CDS 35.0%
GTTGGATTCCTAACTAGAAA+CGG - chr6_1:66852041-66852060 None:intergenic 35.0%
!!! CTATGGCTTTGTTGTTCTTT+TGG - chr6_1:66852079-66852098 None:intergenic 35.0%
CAAAAGAACAACAAAGCCAT+AGG + chr6_1:66852077-66852096 Msa0891490:intron 35.0%
! GGAATTAATAAAGGTGATGG+TGG - chr6_1:66852392-66852411 None:intergenic 35.0%
TCACATTTCAAGAATCTCTC+TGG - chr6_1:66852539-66852558 None:intergenic 35.0%
! TCCTGGAATAAGTTTTGCTA+TGG + chr6_1:66852619-66852638 Msa0891490:CDS 35.0%
ACCATAGCAAAACTTATTCC+AGG - chr6_1:66852623-66852642 None:intergenic 35.0%
TGCTATGGTTGTTAATGAGT+TGG + chr6_1:66852634-66852653 Msa0891490:CDS 35.0%
!! GTTGCTATTTGAAGTGTTTC+GGG + chr6_1:66852828-66852847 Msa0891490:three_prime_UTR 35.0%
AAGTCGAAACTTATGATGCA+CGG - chr6_1:66853007-66853026 None:intergenic 35.0%
TAAGTTTCGACTTTCGAGAA+AGG + chr6_1:66853014-66853033 Msa0891490:three_prime_UTR 35.0%
AGAAACATCGCATATAGCTT+TGG + chr6_1:66853059-66853078 Msa0891490:three_prime_UTR 35.0%
TCACAAGTCTTAGCATGAGT+GGG - chr6_1:66850474-66850493 None:intergenic 40.0%
!!! GCAACATTAGCTTTTGCTTG+TGG - chr6_1:66850537-66850556 None:intergenic 40.0%
!!! ATTGGAAGTTTTGGAGGAGA+TGG - chr6_1:66850679-66850698 None:intergenic 40.0%
AAGTTTGTGGTGAGTGAAAG+TGG - chr6_1:66850725-66850744 None:intergenic 40.0%
GTGCTAAGGATTGAAGTTTG+TGG - chr6_1:66850738-66850757 None:intergenic 40.0%
TGTCTCCAATAGTGACCATA+AGG - chr6_1:66850934-66850953 None:intergenic 40.0%
!! GTTAGGTGCTTGTGTTTTAG+GGG + chr6_1:66851212-66851231 Msa0891490:CDS 40.0%
TTTCCTAACCAATCAAGCCA+AGG - chr6_1:66851246-66851265 None:intergenic 40.0%
TAGAGCTAAAAGAGTGGCTA+AGG + chr6_1:66851284-66851303 Msa0891490:CDS 40.0%
!! GTTTTTGGATGAAGTTGTGG+AGG + chr6_1:66851317-66851336 Msa0891490:CDS 40.0%
GAGAGAAGTAAAAAGGGACT+TGG + chr6_1:66851360-66851379 Msa0891490:CDS 40.0%
!! CTTGGTGATTTTGACCATGA+AGG + chr6_1:66851378-66851397 Msa0891490:CDS 40.0%
TCTATCAATCTCAAATCCGG+TGG - chr6_1:66851451-66851470 None:intergenic 40.0%
TAGCAACATGATGTGAATGC+AGG + chr6_1:66851669-66851688 Msa0891490:intron 40.0%
!! CTTTAGGATATGTTTGGTGC+AGG + chr6_1:66852182-66852201 Msa0891490:intron 40.0%
TACCCTTGCAGTCTTAGAAT+GGG + chr6_1:66852214-66852233 Msa0891490:CDS 40.0%
GCATTACATTTGGGTGTCTT+AGG - chr6_1:66852253-66852272 None:intergenic 40.0%
ACAGCATGAAGTGAGAAATG+TGG + chr6_1:66852280-66852299 Msa0891490:CDS 40.0%
! GCTCAGTTATGTGAGTGTTT+TGG - chr6_1:66852310-66852329 None:intergenic 40.0%
CTCTCTGGTTGAAATTCTAG+TGG - chr6_1:66852524-66852543 None:intergenic 40.0%
!! GATTTGATTCCTTTTGGTGC+TGG + chr6_1:66852584-66852603 Msa0891490:CDS 40.0%
! TTTGATTGGTCATTGCCTAG+TGG + chr6_1:66852680-66852699 Msa0891490:CDS 40.0%
! TTGGACATGTCTGAAACTAC+TGG + chr6_1:66852722-66852741 Msa0891490:CDS 40.0%
! TGGACATGTCTGAAACTACT+GGG + chr6_1:66852723-66852742 Msa0891490:CDS 40.0%
GTCACAAGTCTTAGCATGAG+TGG - chr6_1:66850475-66850494 None:intergenic 45.0%
! GAGTGAAAGTGGCTAGTTGA+TGG - chr6_1:66850714-66850733 None:intergenic 45.0%
CCAATAGTGACCATAAGGAG+CGG - chr6_1:66850929-66850948 None:intergenic 45.0%
ATTGTGTGTAGGGCAACACT+TGG + chr6_1:66851126-66851145 Msa0891490:CDS 45.0%
AGGTGAAGGAAAACTAAGGG+AGG + chr6_1:66851167-66851186 Msa0891490:CDS 45.0%
!! GCTGAGTTGGAAGTGTTGTT+AGG + chr6_1:66851195-66851214 Msa0891490:CDS 45.0%
! GTACCTTGGCTTGATTGGTT+AGG + chr6_1:66851240-66851259 Msa0891490:CDS 45.0%
! TGGAGGAGCATGTTAGTAGT+TGG + chr6_1:66851334-66851353 Msa0891490:CDS 45.0%
GGAGCATGTTAGTAGTTGGT+TGG + chr6_1:66851338-66851357 Msa0891490:CDS 45.0%
ATCCAAAGGACAAATGCCAC+CGG + chr6_1:66851432-66851451 Msa0891490:CDS 45.0%
CTACCCTTGCAGTCTTAGAA+TGG + chr6_1:66852213-66852232 Msa0891490:CDS 45.0%
!! TGCCCATTCTAAGACTGCAA+GGG - chr6_1:66852219-66852238 None:intergenic 45.0%
!! TTGCCCATTCTAAGACTGCA+AGG - chr6_1:66852220-66852239 None:intergenic 45.0%
!! GTGTCTTGCATTGATTCCCT+TGG - chr6_1:66852413-66852432 None:intergenic 45.0%
! ATGGGCTATGACATTTCAGC+TGG + chr6_1:66852440-66852459 Msa0891490:CDS 45.0%
!!! TGATTCCTTTTGGTGCTGGT+AGG + chr6_1:66852588-66852607 Msa0891490:CDS 45.0%
AGTGGAGAGGGATCAAAGTT+TGG + chr6_1:66852703-66852722 Msa0891490:CDS 45.0%
GGTTAGACGTGTCCAAATGT+CGG + chr6_1:66852873-66852892 Msa0891490:three_prime_UTR 45.0%
GACATGTGTCGTGTTCGATA+CGG + chr6_1:66852895-66852914 Msa0891490:three_prime_UTR 45.0%
TGATGCACGGATACAAACAC+TGG - chr6_1:66852994-66853013 None:intergenic 45.0%
!!! GGAAGTTTTGGAGGAGATGG+TGG - chr6_1:66850676-66850695 None:intergenic 50.0%
GATATAGCCTCCGCTCCTTA+TGG + chr6_1:66850916-66850935 Msa0891490:CDS 50.0%
ATAGTGACCATAAGGAGCGG+AGG - chr6_1:66850926-66850945 None:intergenic 50.0%
CCGCTCCTTATGGTCACTAT+TGG + chr6_1:66850926-66850945 Msa0891490:CDS 50.0%
AGGAAAACTAAGGGAGGCAG+TGG + chr6_1:66851173-66851192 Msa0891490:CDS 50.0%
ATCCGGTGGCATTTGTCCTT+TGG - chr6_1:66851437-66851456 None:intergenic 50.0%
!!! TTCCTTTTGGTGCTGGTAGG+AGG + chr6_1:66852591-66852610 Msa0891490:CDS 50.0%
!!! TCCTTTTGGTGCTGGTAGGA+GGG + chr6_1:66852592-66852611 Msa0891490:CDS 50.0%
TTGGTCATTGCCTAGTGGAG+TGG + chr6_1:66852685-66852704 Msa0891490:CDS 50.0%
ATTGCCTAGTGGAGTGGAGA+GGG + chr6_1:66852691-66852710 Msa0891490:CDS 50.0%
TATGAAGCGCAGACACTCCT+CGG + chr6_1:66852852-66852871 Msa0891490:three_prime_UTR 50.0%
CATTTGGACACGTCTAACCG+AGG - chr6_1:66852872-66852891 None:intergenic 50.0%
CACGACACATGTCCGACATT+TGG - chr6_1:66852888-66852907 None:intergenic 50.0%
!!! CCTTTTGGTGCTGGTAGGAG+GGG + chr6_1:66852593-66852612 Msa0891490:CDS 55.0%
CATTGCCTAGTGGAGTGGAG+AGG + chr6_1:66852690-66852709 Msa0891490:CDS 55.0%
TGATCCCTCTCCACTCCACT+AGG - chr6_1:66852698-66852717 None:intergenic 55.0%
AAGGGAGGCAGTGGCTGAGT+TGG + chr6_1:66851182-66851201 Msa0891490:CDS 60.0%
CCCCTCCTACCAGCACCAAA+AGG - chr6_1:66852596-66852615 None:intergenic 60.0%
GCTGGTAGGAGGGGATGTCC+TGG + chr6_1:66852602-66852621 Msa0891490:CDS 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 66850417 66853232 66850417 ID=Msa0891490;Name=Msa0891490
chr6_1 mRNA 66850417 66853232 66850417 ID=Msa0891490-mRNA-1;Parent=Msa0891490;Name=Msa0891490-mRNA-1;_AED=0.00;_eAED=0.00;_QI=133|1|1|1|1|1|2|433|518
chr6_1 exon 66850417 66851494 66850417 ID=Msa0891490-mRNA-1:exon:11927;Parent=Msa0891490-mRNA-1
chr6_1 exon 66852188 66853232 66852188 ID=Msa0891490-mRNA-1:exon:11928;Parent=Msa0891490-mRNA-1
chr6_1 five_prime_UTR 66850417 66850549 66850417 ID=Msa0891490-mRNA-1:five_prime_utr;Parent=Msa0891490-mRNA-1
chr6_1 CDS 66850550 66851494 66850550 ID=Msa0891490-mRNA-1:cds;Parent=Msa0891490-mRNA-1
chr6_1 CDS 66852188 66852799 66852188 ID=Msa0891490-mRNA-1:cds;Parent=Msa0891490-mRNA-1
chr6_1 three_prime_UTR 66852800 66853232 66852800 ID=Msa0891490-mRNA-1:three_prime_utr;Parent=Msa0891490-mRNA-1
Gene Sequence

>Msa0891490

ATGTTGCCTTTTCTACATGGAACCTATTCATTCTTGTTCTTAATATCTATCCTTATACTTGTTATCACCTTACTATATTCACTACCCAAATGGAATTCAAACTCTTCAATCAACAAAAACTCACCACCATCTCCTCCAAAACTTCCAATATTAGGAAATCTCCATCAACTAGCCACTTTCACTCACCACAAACTTCAATCCTTAGCACAAATATATGGTCCTTTAATGTTACTTCACTTTGGAAATGTTCCAATACTTGTTGTCTCAAATTCTAAAGCTGCATGTGAAATCCTAAAAACACATGACCTTGTTTTTTGCAATAGACCACATAGAAAGATGTTTGATATCTTTTGGTATGGTTCAAGAGATATAGCCTCCGCTCCTTATGGTCACTATTGGAGACAAATAAGGAGTATATGTGTTTTACATCTTCTTAGTGCCAAAAAGGTTCAATCTTTTAGTTTACTAAGAGAAGAGGAAAGTGTGATAATGATTGAAAAGATAAGAAAATGGTGTTCTAATTCTTTGTTGCAACCAATGAACTTAACTAATTTGTTATGTGAAACAACTAATGATATTGTGTGTAGGGCAACACTTGGAAAGAGATATAGTGATGAAGGTGAAGGAAAACTAAGGGAGGCAGTGGCTGAGTTGGAAGTGTTGTTAGGTGCTTGTGTTTTAGGGGATTATGTACCTTGGCTTGATTGGTTAGGAAAAGTTAATGGTTTGTATAGTAGAGCTAAAAGAGTGGCTAAGGTATTTGATGAGTTTTTGGATGAAGTTGTGGAGGAGCATGTTAGTAGTTGGTTGGAGAGAAGTAAAAAGGGACTTGGTGATTTTGACCATGAAGGACAAAATGATTTTGTGGATGTTTTGCTTTGGATCCAAAGGACAAATGCCACCGGATTTGAGATTGATAGAACAATCATCAAGGCTTTGATCATGGATATGTTTGGTGCAGGTACAGACACTACCCTTGCAGTCTTAGAATGGGCAATGACAGAACTCCTAAGACACCCAAATGTAATGCAAAAACTACAGCATGAAGTGAGAAATGTGGTTAACCAAAACACTCACATAACTGAGCAAGATTTAAACAAAATGGATTACTTAAAAGCAGTGATCAAAGAAACTCTTAGACTACACCCACCATCACCTTTATTAATTCCAAGGGAATCAATGCAAGACACAAAAATTATGGGCTATGACATTTCAGCTGGAACACAAGTAATAGTTAATGGATATGCAATTTCAACTGATTCTTGTTATTGGGATCAACCACTAGAATTTCAACCAGAGAGATTCTTGAAATGTGAAATTGATATTAAAGGACATGATTTTGATTTGATTCCTTTTGGTGCTGGTAGGAGGGGATGTCCTGGAATAAGTTTTGCTATGGTTGTTAATGAGTTGGTTTTAGCTAATCTTGTTCATCAATTTGATTGGTCATTGCCTAGTGGAGTGGAGAGGGATCAAAGTTTGGACATGTCTGAAACTACTGGGTTAACTATTCATAGAAAATTTCATCTTTTGGCTGTTGCATCTCCACATATATAA
Protein sequence

>Msa0891490

MLPFLHGTYSFLFLISILILVITLLYSLPKWNSNSSINKNSPPSPPKLPILGNLHQLATFTHHKLQSLAQIYGPLMLLHFGNVPILVVSNSKAACEILKTHDLVFCNRPHRKMFDIFWYGSRDIASAPYGHYWRQIRSICVLHLLSAKKVQSFSLLREEESVIMIEKIRKWCSNSLLQPMNLTNLLCETTNDIVCRATLGKRYSDEGEGKLREAVAELEVLLGACVLGDYVPWLDWLGKVNGLYSRAKRVAKVFDEFLDEVVEEHVSSWLERSKKGLGDFDHEGQNDFVDVLLWIQRTNATGFEIDRTIIKALIMDMFGAGTDTTLAVLEWAMTELLRHPNVMQKLQHEVRNVVNQNTHITEQDLNKMDYLKAVIKETLRLHPPSPLLIPRESMQDTKIMGYDISAGTQVIVNGYAISTDSCYWDQPLEFQPERFLKCEIDIKGHDFDLIPFGAGRRGCPGISFAMVVNELVLANLVHQFDWSLPSGVERDQSLDMSETTGLTIHRKFHLLAVASPHI*