AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0895340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0895340 MtrunA17_Chr6g0479161 95.024 422 20 1 59 479 1 422 0.0 790
Msa0895340 MtrunA17_Chr4g0012511 68.651 252 61 3 233 479 15 253 1.74e-114 363
Msa0895340 MtrunA17_Chr3g0113591 36.145 249 125 8 246 478 63 293 2.44e-33 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0895340 AT1G10170.1 49.554 448 193 7 59 479 1 442 1.43e-127 402
Msa0895340 AT1G10170.3 49.554 448 193 7 59 479 1 442 1.43e-127 402
Msa0895340 AT1G10170.4 49.554 448 193 7 59 479 1 442 1.85e-127 402
Msa0895340 AT1G10170.2 51.054 427 146 10 59 479 1 370 2.39e-127 400
Msa0895340 AT5G05660.1 35.950 242 127 7 246 475 73 298 3.03e-36 145

Find 391 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTCTCATAGCTGCCATTT+TGG 0.185574 6_1:+83056046 Msa0895340:three_prime_UTR
GGACTAGTCAAACCATTATT+TGG 0.208700 6_1:-83055791 None:intergenic
GTGCTAAGTTGGAGCGTAAA+AGG 0.256139 6_1:+83056575 Msa0895340:three_prime_UTR
CCTCAGCCGTGTGGCCATTC+AGG 0.257209 6_1:+83056025 Msa0895340:three_prime_UTR
CGCCTTTCGGAATCCATTCT+TGG 0.268701 6_1:-83054168 None:intergenic
TAGAGGGAGGAGTGGGAATA+TGG 0.278869 6_1:+83054597 Msa0895340:CDS
CCATTGTCTGGTCCAAATAA+TGG 0.281236 6_1:+83055779 Msa0895340:three_prime_UTR
AACGACATTTCTGTGAAATT+AGG 0.281782 6_1:-83055631 None:intergenic
GTAGACATGCATGAGGTTTA+TGG 0.288089 6_1:+83057710 Msa0895340:three_prime_UTR
TCAATTAGTGCAGGAGATTC+AGG 0.294195 6_1:+83054657 Msa0895340:CDS
GGATCACGGAACAGTTTATC+AGG 0.296952 6_1:+83057164 Msa0895340:three_prime_UTR
GGTGGAGGCGGTGGCGGTGG+TGG 0.304493 6_1:-83054221 None:intergenic
CTGCAGATGCTCCAGCATTC+TGG 0.305367 6_1:-83057203 None:intergenic
GGTGGTGGCGGCGGCGGTGG+TGG 0.306486 6_1:-83054239 None:intergenic
TCCTACTGCATTTGATCCCT+TGG 0.316189 6_1:+83056969 Msa0895340:three_prime_UTR
AATATGGTGGGGAGGCAATA+TGG 0.320026 6_1:+83054613 Msa0895340:CDS
AGCTCGTGTGCTTGGTGTTA+AGG 0.325842 6_1:+83056921 Msa0895340:three_prime_UTR
TTTATAGCATTCCACAGTTC+TGG 0.327287 6_1:-83055666 None:intergenic
GTGCATGATTTGTTATGATA+TGG 0.334914 6_1:+83054705 Msa0895340:CDS
TCATGAGAGTGCAAACTTGT+AGG 0.341891 6_1:-83054280 None:intergenic
ACGTGATCCAAAGTGGGTTT+TGG 0.342272 6_1:+83056690 Msa0895340:three_prime_UTR
GACTTCGGTTACTAGTGCTT+GGG 0.342524 6_1:+83057227 Msa0895340:three_prime_UTR
GGTGGCGGCGGCGGTGGTGG+AGG 0.344248 6_1:-83054236 None:intergenic
GAGAAGCAATCCATGGAAAA+AGG 0.345057 6_1:+83057284 Msa0895340:three_prime_UTR
AGTCTTGATGCTCTCCATTT+CGG 0.346151 6_1:+83056628 Msa0895340:three_prime_UTR
GGCGGTGGCGGTGGTGGATG+TGG 0.346304 6_1:-83054215 None:intergenic
GGTGGTGGTGGCGGCGGCGG+TGG 0.349532 6_1:-83054242 None:intergenic
CCTTCTGCAGGTGGCGCAAA+TGG 0.352114 6_1:+83057549 Msa0895340:three_prime_UTR
GCTTAAAAGTTCAAACTCAT+TGG 0.353798 6_1:+83057796 Msa0895340:three_prime_UTR
TGCAGTGAACGCTGCTGGCT+GGG 0.354169 6_1:+83056849 Msa0895340:three_prime_UTR
CAGGTTGGAAAGAAGATTCT+TGG 0.356913 6_1:+83057322 Msa0895340:three_prime_UTR
TCAGCGTCCCTTGGCAAGTC+TGG 0.357756 6_1:-83057024 None:intergenic
GCCAAGCACATTTCCACAAT+TGG 0.361227 6_1:-83055375 None:intergenic
CTAGATGCTCCAGCGCCTTT+CGG 0.362730 6_1:-83054181 None:intergenic
TTGCAGTGAACGCTGCTGGC+TGG 0.362960 6_1:+83056848 Msa0895340:three_prime_UTR
CTCGTGTCAGCTTCCATGTT+CGG 0.370114 6_1:+83056000 Msa0895340:three_prime_UTR
GAAATTACGATGAATCTCTT+TGG 0.374571 6_1:-83056874 None:intergenic
GGCGGTGGTGGAGGCGGTGG+CGG 0.376487 6_1:-83054227 None:intergenic
TTATCGGCGGAGAAGAATCT+AGG 0.377795 6_1:+83054826 Msa0895340:CDS
TACCTGCTTCATTGAATCCT+TGG 0.378916 6_1:+83057418 Msa0895340:three_prime_UTR
GGTGGTGGAGGCGGTGGCGG+TGG 0.379058 6_1:-83054224 None:intergenic
TCACATTCACCGCAGCTTCC+CGG 0.379093 6_1:-83055431 None:intergenic
AAATACCCCATTGCTCAGTC+TGG 0.381983 6_1:-83057829 None:intergenic
CTCCTCGTTTGTGCCCTTGT+GGG 0.387856 6_1:+83055106 Msa0895340:CDS
TGGAGACTGCCCTCCTTGTT+CGG 0.388322 6_1:+83056066 Msa0895340:three_prime_UTR
GGCGGCGGTGGTGGAGGCGG+TGG 0.388363 6_1:-83054230 None:intergenic
GGCGGTGGTGGATGTGGTGG+AGG 0.390082 6_1:-83054209 None:intergenic
GTGGTGAATGTGAGCTTGTT+TGG 0.391093 6_1:+83057073 Msa0895340:three_prime_UTR
GCTCGTGTGCTTGGTGTTAA+GGG 0.393588 6_1:+83056922 Msa0895340:three_prime_UTR
GGCGGCGGCGGTGGTGGAGG+CGG 0.395015 6_1:-83054233 None:intergenic
ACCCACCTCAGTTGATTTAT+CGG 0.395713 6_1:+83054810 Msa0895340:CDS
AGGGAGGAGTGGGAATATGG+TGG 0.396721 6_1:+83054600 Msa0895340:CDS
CCTCATCGCAGTTGCAGCTC+GGG 0.397199 6_1:-83057136 None:intergenic
GTAAGGAGACGTGCCATGTC+GGG 0.400852 6_1:+83055588 Msa0895340:CDS
GTAATCACCATGTTGCTCAT+AGG 0.408170 6_1:+83054374 Msa0895340:CDS
AGGTTGGAAAGAAGATTCTT+GGG 0.409557 6_1:+83057323 Msa0895340:three_prime_UTR
CGACTTCGGTTACTAGTGCT+TGG 0.413162 6_1:+83057226 Msa0895340:three_prime_UTR
AGAAGAATCTAGGGTTTAAC+TGG 0.414213 6_1:+83054836 Msa0895340:CDS
GGGTTTAACTGGCGGTGTCC+TGG 0.415241 6_1:+83054847 Msa0895340:CDS
TGGTTTGACTAGTCCGGATT+GGG 0.416241 6_1:+83055799 Msa0895340:three_prime_UTR
AAGAAGAATTCTCACCGAAA+TGG 0.417198 6_1:-83056642 None:intergenic
GAATTGAGAAACAAGCAGTT+TGG 0.422971 6_1:-83052908 None:intergenic
AACAGTTGTGGTGGTGGTGG+CGG 0.424484 6_1:-83054251 None:intergenic
CAATGGGGTATTTGACTAAA+GGG 0.425624 6_1:+83057839 Msa0895340:three_prime_UTR
TTCGTAGGTCTGCGCCTATC+TGG 0.426669 6_1:+83054728 Msa0895340:CDS
TCGGTGGCCATGTCATTCTT+AGG 0.426862 6_1:+83056110 Msa0895340:three_prime_UTR
TGTGGTGGTGGTGGCGGCGG+CGG 0.427035 6_1:-83054245 None:intergenic
GTCATAAGAAGTGTAGCTTC+TGG 0.427840 6_1:+83057486 Msa0895340:three_prime_UTR
CTCTTGTGACACAAACATAA+AGG 0.430159 6_1:+83052793 Msa0895340:CDS
AAGGAGGGCAGTCTCCAAAA+TGG 0.430302 6_1:-83056060 None:intergenic
CATTGCTCAGTCTGGGTAAG+AGG 0.431143 6_1:-83057821 None:intergenic
CTGCTGAAGTTGTAGATGAT+TGG 0.432067 6_1:+83057595 Msa0895340:three_prime_UTR
GGTGGCGGTGGTGGATGTGG+TGG 0.434329 6_1:-83054212 None:intergenic
TTGTGGGGTACATGCTTGTA+AGG 0.437273 6_1:+83055571 Msa0895340:CDS
CTGTCGTGAGGTTTGTCATC+CGG 0.437755 6_1:+83055412 Msa0895340:CDS
AGTTGTGGTGGTGGTGGCGG+CGG 0.439053 6_1:-83054248 None:intergenic
CAAGAATCTTCTTTCCAACC+TGG 0.444302 6_1:-83057321 None:intergenic
GTTTCGTTTGTCCAGAATGC+TGG 0.444800 6_1:+83057192 Msa0895340:three_prime_UTR
TCAATAGCCAAAACCCACTT+TGG 0.445997 6_1:-83056697 None:intergenic
ATGAAAGATAGAGTAGCAAC+TGG 0.449294 6_1:-83054758 None:intergenic
CGGGGAATGTCCACCATGTA+AGG 0.450124 6_1:+83055607 Msa0895340:CDS
AGAGGGAACATGTTGCTCAT+AGG 0.450134 6_1:+83054563 Msa0895340:CDS
ACCGTCCTCCTCGCCAAGAA+TGG 0.451714 6_1:+83054155 Msa0895340:CDS
TGGAGCAACAGCTCCTTGAT+TGG 0.452085 6_1:-83054332 None:intergenic
CTTCTATGCCTAGCAAATGT+TGG 0.453166 6_1:-83054352 None:intergenic
AAATAATGGTTTGACTAGTC+CGG 0.453463 6_1:+83055793 Msa0895340:three_prime_UTR
TCTTACCCAGACTGAGCAAT+GGG 0.454652 6_1:+83057823 Msa0895340:three_prime_UTR
TTGTGTCTTGCAATGCCATC+CGG 0.460020 6_1:+83055053 Msa0895340:CDS
TTTAAGCATTTACCTAAATG+AGG 0.461411 6_1:-83057780 None:intergenic
GGATTCAATGAAGCAGGTAT+TGG 0.462723 6_1:-83057414 None:intergenic
GGACGCTGATATTAGTGCCT+TGG 0.462738 6_1:+83057038 Msa0895340:three_prime_UTR
ATATGCCGGCAGCCACTCCT+TGG 0.463791 6_1:-83056298 None:intergenic
TTGGTCAACAGTTGTGGTGG+TGG 0.464804 6_1:-83054257 None:intergenic
GGTGGTGGATGTGGTGGAGG+CGG 0.465000 6_1:-83054206 None:intergenic
TGTCGTGAGGTTTGTCATCC+GGG 0.469319 6_1:+83055413 Msa0895340:CDS
ATGGTTTGACTAGTCCGGAT+TGG 0.470796 6_1:+83055798 Msa0895340:three_prime_UTR
GGAGGAGTGGGAATATGGTG+GGG 0.471076 6_1:+83054602 Msa0895340:CDS
ATCGCAGTTGCAGCTCGGGC+AGG 0.471207 6_1:-83057132 None:intergenic
AGATGCAAAATATTAGTACT+TGG 0.472851 6_1:+83056724 Msa0895340:three_prime_UTR
TGTTGCTCATAGGGTTGAAA+GGG 0.473648 6_1:+83054573 Msa0895340:CDS
GGGAGGAGTGGGAATATGGT+GGG 0.475674 6_1:+83054601 Msa0895340:CDS
GAGGGAACATGTTGCTCATA+GGG 0.477766 6_1:+83054564 Msa0895340:CDS
CCTCCTCGTTTGTGCCCTTG+TGG 0.478419 6_1:+83055105 Msa0895340:CDS
CAGCATGTCTTGACCCGACT+TGG 0.479450 6_1:-83055461 None:intergenic
GTTGAACGACAGGAATGCTT+TGG 0.479607 6_1:+83057095 Msa0895340:three_prime_UTR
AGCTTGTTTGGTTGAACGAC+AGG 0.479698 6_1:+83057085 Msa0895340:three_prime_UTR
TGCTGAAGTTGTAGATGATT+GGG 0.482445 6_1:+83057596 Msa0895340:three_prime_UTR
TCGTAAACCTTTCACAATAC+CGG 0.484211 6_1:-83056248 None:intergenic
CCATTTGCGCCACCTGCAGA+AGG 0.484630 6_1:-83057549 None:intergenic
TCCTCATCGCAGTTGCAGCT+CGG 0.486230 6_1:-83057137 None:intergenic
GAAAGGGGTAGAGGGAGGAG+TGG 0.486469 6_1:+83054589 Msa0895340:CDS
TGCTAAGTTGGAGCGTAAAA+GGG 0.486754 6_1:+83056576 Msa0895340:three_prime_UTR
AAAGGGGTAGAGGGAGGAGT+GGG 0.488372 6_1:+83054590 Msa0895340:CDS
AGGCATTGTACCGCAAGGTA+GGG 0.488543 6_1:-83055975 None:intergenic
TAATCACCATGTTGCTCATA+GGG 0.489546 6_1:+83054375 Msa0895340:CDS
GTCAACAGTTGTGGTGGTGG+TGG 0.489588 6_1:-83054254 None:intergenic
TCCAATTGTGGAAATGTGCT+TGG 0.493593 6_1:+83055374 Msa0895340:CDS
ACATCGGGACAAGGACATCC+AGG 0.494197 6_1:-83056340 None:intergenic
GAATGGATTCCGAAAGGCGC+TGG 0.495492 6_1:+83054172 Msa0895340:CDS
AAGCTTGCAGTGAACGCTGC+TGG 0.497964 6_1:+83056844 Msa0895340:three_prime_UTR
TTAACACCAAGCACACGAGC+TGG 0.498030 6_1:-83056919 None:intergenic
CAATTCTTCTTTGCCCCACA+CGG 0.498351 6_1:-83055725 None:intergenic
CAAAAGTGAGGATCCCAATC+CGG 0.499368 6_1:-83055812 None:intergenic
CATAGGGTTGAAAGGGGTAG+AGG 0.499573 6_1:+83054580 Msa0895340:CDS
TTCCAAGGATTCAATGAAGC+AGG 0.500006 6_1:-83057420 None:intergenic
TCTCGTTTCCAGACTTGCCA+AGG 0.500010 6_1:+83057016 Msa0895340:three_prime_UTR
AAGACCCCAGCTCGTGTGCT+TGG 0.500388 6_1:+83056913 Msa0895340:three_prime_UTR
ATGCGGGAAGCCTCTTGAAA+AGG 0.500837 6_1:+83054984 Msa0895340:CDS
CTTCAACCAGTCGATGCAAA+TGG 0.502699 6_1:+83056505 Msa0895340:three_prime_UTR
TGCTGCTCATCGAGTTGAAA+GGG 0.504339 6_1:+83054492 Msa0895340:CDS
TAACACCAAGCACACGAGCT+GGG 0.506872 6_1:-83056918 None:intergenic
AAGGTGAATTTGAAGCAGAA+GGG 0.507245 6_1:+83055334 Msa0895340:CDS
GGAGTGGGAATATGGTGGGG+AGG 0.508290 6_1:+83054605 Msa0895340:CDS
GGGTCCTTGTGATCCTTGTC+AGG 0.511887 6_1:+83055242 Msa0895340:CDS
TGTGAAATTAGGACCTTACA+TGG 0.513903 6_1:-83055620 None:intergenic
GCAGCAAGACCCTTCGTTGT+GGG 0.514391 6_1:+83055555 Msa0895340:CDS
GGCATTGTACCGCAAGGTAG+GGG 0.514400 6_1:-83055974 None:intergenic
TGTGATAAGCTTCTTGATTG+TGG 0.515511 6_1:+83055189 Msa0895340:CDS
GCTTCTTTCTTCAGAACCGA+TGG 0.516034 6_1:-83057390 None:intergenic
TGTTGCTCATAGGGTGGAAA+GGG 0.516162 6_1:+83054384 Msa0895340:CDS
TTCTCTTCCTCTTCTCGTCA+AGG 0.516587 6_1:+83052928 Msa0895340:CDS
ATGTTGCTCATAGGGTTGAA+AGG 0.517103 6_1:+83054572 Msa0895340:CDS
ATTTGATCCCTTGGTTGACA+TGG 0.517286 6_1:+83056978 Msa0895340:three_prime_UTR
TGAATCTCCTGCACTAATTG+AGG 0.518054 6_1:-83054655 None:intergenic
ACTAAGGTGGAGCCTTCTGC+AGG 0.518441 6_1:+83057537 Msa0895340:three_prime_UTR
ATCTGAATTGCATCAAGAAG+TGG 0.519085 6_1:+83054779 Msa0895340:CDS
GTTTGTTACTGAAGAGAGAA+AGG 0.519366 6_1:+83055011 Msa0895340:CDS
GAGGCATTGTACCGCAAGGT+AGG 0.519375 6_1:-83055976 None:intergenic
GGGTTGAAAGGGGTAGAGGG+AGG 0.520521 6_1:+83054584 Msa0895340:CDS
CACGGCTGAGGAACCGAACA+TGG 0.521688 6_1:-83056013 None:intergenic
GAAAAGTGTTGTCCATTGTC+TGG 0.521883 6_1:+83055767 Msa0895340:three_prime_UTR
GCAATGGGGTATTTGACTAA+AGG 0.521898 6_1:+83057838 Msa0895340:three_prime_UTR
GAGAAAGGAGGGAAGGGTCG+AGG 0.523177 6_1:+83054122 Msa0895340:CDS
GGCAGCTATGAGAGCCTGAA+TGG 0.524476 6_1:-83056039 None:intergenic
ATCGACTGGTTGAAGAGGCA+TGG 0.525894 6_1:-83056497 None:intergenic
TGACGAGGAATGTGCTAAGT+TGG 0.527115 6_1:+83056564 Msa0895340:three_prime_UTR
AGAGGGAACATGTTGCGCAC+AGG 0.527203 6_1:+83054455 Msa0895340:CDS
GTACCGCAAGGTAGGGGAGG+AGG 0.527467 6_1:-83055968 None:intergenic
ATGTTGCTCATAGGATGGAC+AGG 0.528463 6_1:+83054410 Msa0895340:CDS
AAAGGGAACATGTTGCTCAT+AGG 0.528843 6_1:+83054401 Msa0895340:CDS
ACAACGTTTCACACACATGC+TGG 0.529125 6_1:-83055868 None:intergenic
ATTCGCAGAATCACCGGTAG+TGG 0.531731 6_1:-83057361 None:intergenic
TTTGGGTGCAGAAGGGACAT+TGG 0.532116 6_1:+83054077 Msa0895340:intron
ATTCTACCCGGTATTGTGAA+AGG 0.532277 6_1:+83056241 Msa0895340:three_prime_UTR
CTGTTGCTCCAACATTTGCT+AGG 0.532327 6_1:+83054344 Msa0895340:CDS
TGTATGGCTCTCTGTCACCC+TGG 0.532396 6_1:+83056322 Msa0895340:three_prime_UTR
GTGCTCCAAGGAGTGGCTGC+CGG 0.533669 6_1:+83056293 Msa0895340:three_prime_UTR
AAGAATCTTCTTTCCAACCT+GGG 0.533818 6_1:-83057320 None:intergenic
ATAGATACCTTGACGAGAAG+AGG 0.534503 6_1:-83052935 None:intergenic
GAGAAGAATACTAATAATGA+TGG 0.534781 6_1:+83054301 Msa0895340:CDS
AAAGGTGAATTTGAAGCAGA+AGG 0.535858 6_1:+83055333 Msa0895340:CDS
ATTCGTGTGGCGAACCATGC+GGG 0.536514 6_1:+83054968 Msa0895340:CDS
GAGGGAACATGTTGCGCACA+GGG 0.537291 6_1:+83054456 Msa0895340:CDS
TGGAGCATCTGCAGCGACTT+CGG 0.537736 6_1:+83057212 Msa0895340:three_prime_UTR
TGTGTCTTGCAATGCCATCC+GGG 0.537865 6_1:+83055054 Msa0895340:CDS
CGCCGATAAATCAACTGAGG+TGG 0.538096 6_1:-83054812 None:intergenic
GAGAATTCACATCTTACATC+GGG 0.538340 6_1:-83056355 None:intergenic
ACTGATTTAGCATGTGCTTG+TGG 0.539545 6_1:+83055932 Msa0895340:three_prime_UTR
CGGGTCAAGACATGCTGTTG+TGG 0.539727 6_1:+83055467 Msa0895340:CDS
GGGTCAAGACATGCTGTTGT+GGG 0.540879 6_1:+83055468 Msa0895340:CDS
TGAGAATGATTGCTGAAAGA+TGG 0.540969 6_1:+83056821 Msa0895340:three_prime_UTR
GCAAATGTTCCTTGTGATGT+TGG 0.541124 6_1:+83056412 Msa0895340:three_prime_UTR
GATGAACAATGGACCACTAC+CGG 0.541527 6_1:+83057348 Msa0895340:three_prime_UTR
AATGCTTTGCACGGAGGACA+TGG 0.541887 6_1:-83055078 None:intergenic
TCATGATTCAGAACATTCCA+AGG 0.543205 6_1:-83057435 None:intergenic
AGGTGAATTTGAAGCAGAAG+GGG 0.543773 6_1:+83055335 Msa0895340:CDS
GGATCAAATGCAGTAGGAAG+CGG 0.544368 6_1:-83056964 None:intergenic
CAGCGGTTCTCGACCCAGGT+TGG 0.544602 6_1:+83057307 Msa0895340:three_prime_UTR
CTTTCTTCAGAACCGATGGT+TGG 0.545245 6_1:-83057386 None:intergenic
CGGGTAGAATATCACAAGGT+GGG 0.546299 6_1:-83056228 None:intergenic
ACAAGGGCACAAACGAGGAG+GGG 0.546918 6_1:-83055103 None:intergenic
TTTGACACAGGCACCGAACA+AGG 0.546948 6_1:-83056079 None:intergenic
CACAAGGGCACAAACGAGGA+GGG 0.548702 6_1:-83055104 None:intergenic
CCTGAATGGCCACACGGCTG+AGG 0.549497 6_1:-83056025 None:intergenic
ATCGAGTTCGAGTTCATCAT+CGG 0.549662 6_1:+83057458 Msa0895340:three_prime_UTR
TTACTTGTCAAAAGCCGTGT+GGG 0.549777 6_1:+83055711 Msa0895340:three_prime_UTR
GTTACAATTACTTGTTCTTG+TGG 0.551460 6_1:+83056379 Msa0895340:three_prime_UTR
CCACCTTGTGATATTCTACC+CGG 0.551617 6_1:+83056229 Msa0895340:three_prime_UTR
AAGGGAACATGTTGCTCAGA+GGG 0.553158 6_1:+83054510 Msa0895340:CDS
CTCGTTTCCAGACTTGCCAA+GGG 0.553320 6_1:+83057017 Msa0895340:three_prime_UTR
CAAAGACGAGAAAGGAGGGA+AGG 0.553775 6_1:+83054115 Msa0895340:CDS
TGGCGAGGAGGACGGTGTGA+AGG 0.554470 6_1:-83054148 None:intergenic
GATGCAAAATATTAGTACTT+GGG 0.554813 6_1:+83056725 Msa0895340:three_prime_UTR
TAGCTTGCCTCAATTAGTGC+AGG 0.555352 6_1:+83054648 Msa0895340:CDS
CGTAAACCTTTCACAATACC+GGG 0.557381 6_1:-83056247 None:intergenic
GGCGAGGAGGACGGTGTGAA+GGG 0.558326 6_1:-83054147 None:intergenic
ATTCTTGGGGCGATGAACAA+TGG 0.558757 6_1:+83057337 Msa0895340:three_prime_UTR
AAATGGAGAGCATCAAGACT+TGG 0.559119 6_1:-83056625 None:intergenic
TTGCTACTCGCTGTTCTGAT+CGG 0.560740 6_1:+83055139 Msa0895340:CDS
TCGCTGTTCTGATCGGCAGT+CGG 0.561149 6_1:+83055146 Msa0895340:CDS
AAGGCAGCGGTTCTCGACCC+AGG 0.562109 6_1:+83057303 Msa0895340:three_prime_UTR
TGTAAGGAGACGTGCCATGT+CGG 0.562644 6_1:+83055587 Msa0895340:CDS
TGTTTCTCAGAGGGTGGAGA+GGG 0.564878 6_1:+83054438 Msa0895340:CDS
AGCATGTACCCCACAACGAA+GGG 0.565625 6_1:-83055564 None:intergenic
TGTTGCACAGACTGACAACC+AGG 0.566747 6_1:-83054865 None:intergenic
GGAGGGGCAAATGCTTTGCA+CGG 0.567452 6_1:-83055087 None:intergenic
TCCTTGTCAGGTGCTAATTG+AGG 0.567783 6_1:+83055254 Msa0895340:CDS
CATGGTTCGCCACACGAATG+AGG 0.568538 6_1:-83054964 None:intergenic
AAGCAGCGATGTCTCAACTA+AGG 0.568704 6_1:+83057521 Msa0895340:three_prime_UTR
CCATTATTTGGACCAGACAA+TGG 0.568837 6_1:-83055779 None:intergenic
GGAATCCATTCTTGGCGAGG+AGG 0.569499 6_1:-83054160 None:intergenic
TCCATTCTTGGCGAGGAGGA+CGG 0.569808 6_1:-83054156 None:intergenic
TCGACTGGTTGAAGAGGCAT+GGG 0.572972 6_1:-83056496 None:intergenic
TGCAGCAAGACCCTTCGTTG+TGG 0.573280 6_1:+83055554 Msa0895340:CDS
TTCGGAATCCATTCTTGGCG+AGG 0.573587 6_1:-83054163 None:intergenic
TGTTGCTCAGAGGGTGGAGA+GGG 0.573681 6_1:+83054519 Msa0895340:CDS
TTGGATATTCGCAGAATCAC+CGG 0.574318 6_1:-83057367 None:intergenic
GCTTGCAACAAAGACGAGAA+AGG 0.574653 6_1:+83054107 Msa0895340:CDS
AAGCGGCGCATTTAGAGTTG+TGG 0.575518 6_1:-83056947 None:intergenic
ATGTTGCTCATAGGGTGGAA+AGG 0.576688 6_1:+83054383 Msa0895340:CDS
CGTTTAGACGTGATCCAAAG+TGG 0.576848 6_1:+83056683 Msa0895340:three_prime_UTR
GCATTGTCTAGTCCTTCCAC+AGG 0.577506 6_1:-83056173 None:intergenic
CAGCTTCTTCCCACACAGCA+TGG 0.577664 6_1:-83055837 None:intergenic
GATGGTGGTTCATCCAATCA+AGG 0.578300 6_1:+83054319 Msa0895340:CDS
TGGCGCAAATGGAGGAAACT+CGG 0.578640 6_1:+83057560 Msa0895340:three_prime_UTR
GCCTCAATTAGCACCTGACA+AGG 0.579213 6_1:-83055255 None:intergenic
ATAGGGTTGAAAGGGGTAGA+GGG 0.579536 6_1:+83054581 Msa0895340:CDS
GAGAGTGCAAACTTGTAGGT+TGG 0.579722 6_1:-83054276 None:intergenic
AAAGACGAGAAAGGAGGGAA+GGG 0.580583 6_1:+83054116 Msa0895340:CDS
TGCAACTGCGATGAGGAGGT+TGG 0.581146 6_1:+83057143 Msa0895340:three_prime_UTR
TGAGGCAAGCTAGAGTCCCT+TGG 0.582117 6_1:-83054637 None:intergenic
GCACTAATATCAGCGTCCCT+TGG 0.582195 6_1:-83057033 None:intergenic
TTTGTTATGATATGGTTCGT+AGG 0.582556 6_1:+83054713 Msa0895340:CDS
TGTTGCTCATCGTGTGGAGA+GGG 0.582639 6_1:+83054546 Msa0895340:CDS
CTCTTACCCAGACTGAGCAA+TGG 0.583365 6_1:+83057822 Msa0895340:three_prime_UTR
CCCGAGCTGCAACTGCGATG+AGG 0.583388 6_1:+83057136 Msa0895340:three_prime_UTR
TATCGGCGGAGAAGAATCTA+GGG 0.584465 6_1:+83054827 Msa0895340:CDS
GCTTGGGGAGGAACGAAAGA+GGG 0.586384 6_1:+83057243 Msa0895340:three_prime_UTR
TTGCCAAAACTGACAAAACA+TGG 0.587187 6_1:-83057743 None:intergenic
CAACACTGAGAAGCAATCCA+TGG 0.587739 6_1:+83057277 Msa0895340:three_prime_UTR
AGAGAGCCATACACATATGC+CGG 0.588757 6_1:-83056312 None:intergenic
AACACCAAGCACACGAGCTG+GGG 0.589131 6_1:-83056917 None:intergenic
CAGGAATCATGTTTCTCAGA+GGG 0.589770 6_1:+83054429 Msa0895340:CDS
AGTTGTAGATGATTGGGAGA+AGG 0.591310 6_1:+83057602 Msa0895340:three_prime_UTR
AATACCCCATTGCTCAGTCT+GGG 0.591811 6_1:-83057828 None:intergenic
ATGCTGCTCATCGAGTTGAA+AGG 0.592786 6_1:+83054491 Msa0895340:CDS
GCACCACAAGTCTGTCCACA+TGG 0.594247 6_1:-83056274 None:intergenic
GCCGATAAATCAACTGAGGT+GGG 0.594419 6_1:-83054811 None:intergenic
CGCGGGTCCATGTCAACCAA+GGG 0.594623 6_1:-83056985 None:intergenic
TGTGCAACATACGTCTTCAA+AGG 0.595693 6_1:+83054879 Msa0895340:CDS
CCGCGGGTCCATGTCAACCA+AGG 0.596727 6_1:-83056986 None:intergenic
TTTGCATCGACTGGTTGAAG+AGG 0.596875 6_1:-83056502 None:intergenic
TGCTTGGGGAGGAACGAAAG+AGG 0.597959 6_1:+83057242 Msa0895340:three_prime_UTR
TCTGAATTGCATCAAGAAGT+GGG 0.598520 6_1:+83054780 Msa0895340:CDS
CTGTTGTGGGAAAACAAAGT+TGG 0.599222 6_1:+83055481 Msa0895340:CDS
TTAGTACTTGGGAAAAGCAA+AGG 0.599353 6_1:+83056736 Msa0895340:three_prime_UTR
GGAACATGTTGCTCATAGGA+TGG 0.600274 6_1:+83054405 Msa0895340:CDS
AAGGTGGAGCCTTCTGCAGG+TGG 0.601388 6_1:+83057540 Msa0895340:three_prime_UTR
ATTGTACCGCAAGGTAGGGG+AGG 0.601611 6_1:-83055971 None:intergenic
CGGGAAGCCTCTTGAAAAGG+AGG 0.601799 6_1:+83054987 Msa0895340:CDS
GGAGGAACGAAAGAGGGAGG+AGG 0.602030 6_1:+83057249 Msa0895340:three_prime_UTR
ATTCCTCCTCCCCTACCTTG+CGG 0.603108 6_1:+83055965 Msa0895340:three_prime_UTR
GTGAAGATTGTTTCAAGACA+AGG 0.603262 6_1:-83055911 None:intergenic
TGTAGGTTGGTCAACAGTTG+TGG 0.603427 6_1:-83054263 None:intergenic
CAGCGATGTCTCAACTAAGG+TGG 0.605037 6_1:+83057524 Msa0895340:three_prime_UTR
TCTGCAGGTGGCGCAAATGG+AGG 0.605676 6_1:+83057552 Msa0895340:three_prime_UTR
ATGGTGGACATTCCCCGACA+TGG 0.605753 6_1:-83055601 None:intergenic
CATTGCAAGACACAAGCATG+AGG 0.606756 6_1:-83055045 None:intergenic
AATGCAATAATCCCTGTGGA+AGG 0.606773 6_1:+83056161 Msa0895340:three_prime_UTR
GTTTGTCATCCGGGAAGCTG+CGG 0.607050 6_1:+83055422 Msa0895340:CDS
TTGCACGGAGGACATGGACC+CGG 0.607370 6_1:-83055072 None:intergenic
TGTGGGGAGATGGCTATGAA+AGG 0.607727 6_1:+83055315 Msa0895340:CDS
GGGGAGGCAATATGGACCAA+GGG 0.608564 6_1:+83054621 Msa0895340:CDS
GACAGACTTGTGGTGCTCCA+AGG 0.608614 6_1:+83056281 Msa0895340:three_prime_UTR
GAATCATGTTTCTCAGAGGG+TGG 0.609456 6_1:+83054432 Msa0895340:CDS
CAACTGGAGCAAGACCAGAT+AGG 0.609508 6_1:-83054742 None:intergenic
TAAGGAGACGTGCCATGTCG+GGG 0.611169 6_1:+83055589 Msa0895340:CDS
GAGCTGCAACTGCGATGAGG+AGG 0.612358 6_1:+83057139 Msa0895340:three_prime_UTR
TATTTAACACCTCATTCGTG+TGG 0.616737 6_1:+83054955 Msa0895340:CDS
CAGCAAGACCCTTCGTTGTG+GGG 0.616822 6_1:+83055556 Msa0895340:CDS
CGCCAAGAATGGATTCCGAA+AGG 0.617456 6_1:+83054166 Msa0895340:CDS
TGTGAAACGTTGTGTCATAG+TGG 0.617596 6_1:+83055878 Msa0895340:three_prime_UTR
TACTTGTCAAAAGCCGTGTG+GGG 0.620258 6_1:+83055712 Msa0895340:three_prime_UTR
GGTGTTAAATACAAATCAGA+CGG 0.620364 6_1:-83054943 None:intergenic
ACTTGTGGTGCTCCAAGGAG+TGG 0.621111 6_1:+83056286 Msa0895340:three_prime_UTR
TGCAACAAAGACGAGAAAGG+AGG 0.623384 6_1:+83054110 Msa0895340:CDS
CGAACATGGAAGCTGACACG+AGG 0.623829 6_1:-83055999 None:intergenic
GCAACAAAGACGAGAAAGGA+GGG 0.625819 6_1:+83054111 Msa0895340:CDS
ATGTTTCTCAGAGGGTGGAG+AGG 0.626512 6_1:+83054437 Msa0895340:CDS
AAGAATACTAATAATGATGG+TGG 0.626879 6_1:+83054304 Msa0895340:CDS
TTCTGCGAATATCCAACCAT+CGG 0.627235 6_1:+83057374 Msa0895340:three_prime_UTR
ATGTTGCTCAGAGGGTGGAG+AGG 0.627374 6_1:+83054518 Msa0895340:CDS
CATTCGTGTGGCGAACCATG+CGG 0.627470 6_1:+83054967 Msa0895340:CDS
ACTTCGGTTACTAGTGCTTG+GGG 0.628795 6_1:+83057228 Msa0895340:three_prime_UTR
CCACAAGGGCACAAACGAGG+AGG 0.629213 6_1:-83055105 None:intergenic
TTGTGGGAAAACAAAGTTGG+AGG 0.630286 6_1:+83055484 Msa0895340:CDS
GGAACATGTTGCTCAGAGGG+TGG 0.631552 6_1:+83054513 Msa0895340:CDS
GAAACGAGACAACAAGCCGC+GGG 0.631610 6_1:-83057002 None:intergenic
ATGTTGCTCATCGTGTGGAG+AGG 0.631919 6_1:+83054545 Msa0895340:CDS
GGAGAATTCACATCTTACAT+CGG 0.632388 6_1:-83056356 None:intergenic
TGGCTCAACTTCCAGAACTG+TGG 0.633025 6_1:+83055655 Msa0895340:three_prime_UTR
CCTTGGTTGACATGGACCCG+CGG 0.634084 6_1:+83056986 Msa0895340:three_prime_UTR
TGGGGAGGAACGAAAGAGGG+AGG 0.634097 6_1:+83057246 Msa0895340:three_prime_UTR
TTCCCACAAGGGCACAAACG+AGG 0.634638 6_1:-83055108 None:intergenic
ATTCAGGAGAAGCTCACGAA+AGG 0.636122 6_1:+83054673 Msa0895340:CDS
TGTGAAAATGCATGCCATGT+GGG 0.636695 6_1:+83055222 Msa0895340:CDS
AAGACTTGGAGTGATGTCAA+AGG 0.637012 6_1:-83056611 None:intergenic
CACCTCAGTTGATTTATCGG+CGG 0.638209 6_1:+83054813 Msa0895340:CDS
GTTAAATACAAATCAGACGG+AGG 0.638266 6_1:-83054940 None:intergenic
TCACCATGTTGCTCATAGGG+TGG 0.640514 6_1:+83054378 Msa0895340:CDS
ACGGAGGACATGGACCCGGA+TGG 0.640740 6_1:-83055068 None:intergenic
GTTTAGACGTGATCCAAAGT+GGG 0.640892 6_1:+83056684 Msa0895340:three_prime_UTR
GCGATGAGGAGGTTGGATCA+CGG 0.643207 6_1:+83057150 Msa0895340:three_prime_UTR
AAGCATGTACCCCACAACGA+AGG 0.643432 6_1:-83055565 None:intergenic
AATGTTCCTTGTGATGTTGG+TGG 0.643991 6_1:+83056415 Msa0895340:three_prime_UTR
AAGATTGTTTCAAGACAAGG+TGG 0.645060 6_1:-83055908 None:intergenic
ACACAGGCACCGAACAAGGA+GGG 0.645071 6_1:-83056075 None:intergenic
AGGTTGGTCAACAGTTGTGG+TGG 0.645654 6_1:-83054260 None:intergenic
ACAAGAACAAGTAATTGTAA+CGG 0.646014 6_1:-83056377 None:intergenic
AGCACCTGACAAGGATCACA+AGG 0.646560 6_1:-83055246 None:intergenic
GATCACGGAACAGTTTATCA+GGG 0.646768 6_1:+83057165 Msa0895340:three_prime_UTR
AAGGAACATTTGCTGATATG+CGG 0.647466 6_1:-83056402 None:intergenic
TGTGGGGCAAAGAAGAATTG+TGG 0.650171 6_1:+83055728 Msa0895340:three_prime_UTR
GGAACATGTTGCTCATCGTG+TGG 0.651533 6_1:+83054540 Msa0895340:CDS
TTAATATTATTTGAGCCACA+AGG 0.651781 6_1:-83056139 None:intergenic
CATCGGGACAAGGACATCCA+GGG 0.652130 6_1:-83056339 None:intergenic
GGTTGGAAAGAAGATTCTTG+GGG 0.652331 6_1:+83057324 Msa0895340:three_prime_UTR
TCACATCTTACATCGGGACA+AGG 0.654466 6_1:-83056349 None:intergenic
GATAAAGGATAAAAGAGATG+CGG 0.654783 6_1:+83056798 Msa0895340:three_prime_UTR
TTTACTTGTCAAAAGCCGTG+TGG 0.654831 6_1:+83055710 Msa0895340:three_prime_UTR
AGAATCTAGGGTTTAACTGG+CGG 0.656183 6_1:+83054839 Msa0895340:CDS
GCGCCATGTGGACAGACTTG+TGG 0.657792 6_1:+83056271 Msa0895340:three_prime_UTR
ACCAAGGGATCAAATGCAGT+AGG 0.658612 6_1:-83056970 None:intergenic
TCGGTTACTAGTGCTTGGGG+AGG 0.658781 6_1:+83057231 Msa0895340:three_prime_UTR
GAACATGGAAGCTGACACGA+GGG 0.659642 6_1:-83055998 None:intergenic
ATTAAATGCAATAATCCCTG+TGG 0.660621 6_1:+83056157 Msa0895340:three_prime_UTR
GGGCAAAGAAGAATTGTGGA+AGG 0.663235 6_1:+83055732 Msa0895340:three_prime_UTR
TTATTACCACCAACATCACA+AGG 0.665046 6_1:-83056421 None:intergenic
TTATCATAGGACAAAAGACA+TGG 0.665931 6_1:-83056780 None:intergenic
ATTGCAAGACACAAGCATGA+GGG 0.666099 6_1:-83055044 None:intergenic
GGAAACGAGACAACAAGCCG+CGG 0.666131 6_1:-83057003 None:intergenic
AAAGGGAACATGTTGCTCAG+AGG 0.666302 6_1:+83054509 Msa0895340:CDS
CATTGTCTAGTCCTTCCACA+GGG 0.666428 6_1:-83056172 None:intergenic
CAGTAATCATATCTGTCGTG+AGG 0.667219 6_1:+83055400 Msa0895340:CDS
GGGTAGAATATCACAAGGTG+GGG 0.668079 6_1:-83056227 None:intergenic
GGATGAACGCAAGAGTTGTG+TGG 0.668406 6_1:+83055505 Msa0895340:CDS
AAAGGTTTACGAGCGCCATG+TGG 0.672462 6_1:+83056259 Msa0895340:three_prime_UTR
TGGGGAGGCAATATGGACCA+AGG 0.673331 6_1:+83054620 Msa0895340:CDS
GAAGCTCACGAAAGGTACTG+TGG 0.673659 6_1:+83054681 Msa0895340:CDS
ATTCTTAGGAACATACCTTG+TGG 0.675287 6_1:+83056124 Msa0895340:three_prime_UTR
AAAAGCAAAGGAACTACACA+TGG 0.675412 6_1:+83056748 Msa0895340:three_prime_UTR
TGTGGGAAGAAGCTGAGATG+TGG 0.675783 6_1:+83055845 Msa0895340:three_prime_UTR
TGTTCGGTTCCTCAGCCGTG+TGG 0.676228 6_1:+83056016 Msa0895340:three_prime_UTR
TTAAATACAAATCAGACGGA+GGG 0.678497 6_1:-83054939 None:intergenic
GGGGCAAATGCTTTGCACGG+AGG 0.678987 6_1:-83055084 None:intergenic
AAGGATCACAAGGACCCACA+TGG 0.679240 6_1:-83055236 None:intergenic
TTGAAAAGTAGACATGCATG+AGG 0.680292 6_1:+83057703 Msa0895340:three_prime_UTR
CTCCGCCGATAAATCAACTG+AGG 0.681469 6_1:-83054815 None:intergenic
ATTTCACAGAAATGTCGTTG+TGG 0.682580 6_1:+83055635 Msa0895340:exon
CACAGCATGGAACAAAAGTG+AGG 0.684488 6_1:-83055824 None:intergenic
GACACAGGCACCGAACAAGG+AGG 0.685013 6_1:-83056076 None:intergenic
CCGGGTAGAATATCACAAGG+TGG 0.686630 6_1:-83056229 None:intergenic
ACAGGAATCATGTTTCTCAG+AGG 0.691295 6_1:+83054428 Msa0895340:CDS
AGATTGTTTCAAGACAAGGT+GGG 0.693635 6_1:-83055907 None:intergenic
TTTCCACCCTATGAGCAACA+TGG 0.694732 6_1:-83054381 None:intergenic
GGAACATGTTGCGCACAGGG+TGG 0.696437 6_1:+83054459 Msa0895340:CDS
TTGTGAAAATGCATGCCATG+TGG 0.696500 6_1:+83055221 Msa0895340:CDS
GTGTCAAAAGAATGTGTCGG+TGG 0.698247 6_1:+83056094 Msa0895340:three_prime_UTR
GTTGCTCATAGGGTTGAAAG+GGG 0.699332 6_1:+83054574 Msa0895340:CDS
ACCACCGAATCTCAAAACCA+AGG 0.702952 6_1:-83057055 None:intergenic
AAGAAAACTGATGTGTGACG+AGG 0.703423 6_1:+83056549 Msa0895340:three_prime_UTR
CATGGAAGCTGACACGAGGG+AGG 0.703548 6_1:-83055995 None:intergenic
GAGGGAGGCATTGTACCGCA+AGG 0.704446 6_1:-83055980 None:intergenic
TGAGAGCCTGAATGGCCACA+CGG 0.707500 6_1:-83056031 None:intergenic
CAATGCGGTTTACATGCATG+TGG 0.711129 6_1:+83056190 Msa0895340:three_prime_UTR
GTATGTTCCTAAGAATGACA+TGG 0.712888 6_1:-83056117 None:intergenic
GAAATTAGGACCTTACATGG+TGG 0.726776 6_1:-83055617 None:intergenic
CCTGTGTCAAAAGAATGTGT+CGG 0.732184 6_1:+83056091 Msa0895340:three_prime_UTR
CTTACCCAGACTGAGCAATG+GGG 0.759313 6_1:+83057824 Msa0895340:three_prime_UTR
ATACCGGGTAGAATATCACA+AGG 0.761810 6_1:-83056232 None:intergenic
TGTGGAAGGACTAGACAATG+CGG 0.777229 6_1:+83056175 Msa0895340:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACAATGAAATTGAAAATA+TGG + chr6_1:83052989-83053008 Msa0895340:intron 15.0%
!!! TAATTTATGGATTTTAGTTA+AGG + chr6_1:83053129-83053148 Msa0895340:intron 15.0%
!!! AATTTATGGATTTTAGTTAA+GGG + chr6_1:83053130-83053149 Msa0895340:intron 15.0%
!!! TTATTGTAGTTTTGATTTTT+TGG + chr6_1:83053571-83053590 Msa0895340:intron 15.0%
!!! TATTGTAGTTTTGATTTTTT+GGG + chr6_1:83053572-83053591 Msa0895340:intron 15.0%
!!! ATTGTTATAGTTTTGAATTT+TGG + chr6_1:83053805-83053824 Msa0895340:intron 15.0%
!!! TTGTTATAGTTTTGAATTTT+GGG + chr6_1:83053806-83053825 Msa0895340:intron 15.0%
!!! TGTTTTTGTGATGTAATTTA+TGG + chr6_1:83053116-83053135 Msa0895340:intron 20.0%
!!! ATTGTTGTAGTTTTGAATTT+AGG + chr6_1:83053232-83053251 Msa0895340:intron 20.0%
!!! TTGTTGTAGTTTTGAATTTA+GGG + chr6_1:83053233-83053252 Msa0895340:intron 20.0%
!!! TCTTTTTGTGTTTTTGTTTA+TGG + chr6_1:83053291-83053310 Msa0895340:intron 20.0%
!!! CTTTTTGTGTTTTTGTTTAT+GGG + chr6_1:83053292-83053311 Msa0895340:intron 20.0%
!!! TTTTTTGTTGTTAAGAATTG+AGG + chr6_1:83053319-83053338 Msa0895340:intron 20.0%
!!! TTTTTGTTGTTAAGAATTGA+GGG + chr6_1:83053320-83053339 Msa0895340:intron 20.0%
!!! TTGTTAAGAGTTTTGAATTT+TGG + chr6_1:83053905-83053924 Msa0895340:intron 20.0%
!!! TGTTAAGAGTTTTGAATTTT+GGG + chr6_1:83053906-83053925 Msa0895340:intron 20.0%
!!! ATTGTTAATGGTTTGAATTT+TGG + chr6_1:83054059-83054078 Msa0895340:intron 20.0%
!!! TTGTTAATGGTTTGAATTTT+GGG + chr6_1:83054060-83054079 Msa0895340:intron 20.0%
!!! TCTTTTTGTGTTTTTGTTTC+TGG + chr6_1:83053088-83053107 Msa0895340:intron 25.0%
!!! CTTTTTGTGTTTTTGTTTCT+GGG + chr6_1:83053089-83053108 Msa0895340:intron 25.0%
!!! TTTTGTTGTTAAGAATTGAG+GGG + chr6_1:83053321-83053340 Msa0895340:intron 25.0%
!!! TAGTTTTGATTTTTTGGGTT+GGG + chr6_1:83053577-83053596 Msa0895340:intron 25.0%
!!! ATGAGATTTTTTTGAGTGAT+TGG + chr6_1:83053766-83053785 Msa0895340:intron 25.0%
!! GTAGTTGAATATTGTGATTT+TGG + chr6_1:83053947-83053966 Msa0895340:intron 25.0%
! AAATCGAAAACTCAAAATCT+CGG - chr6_1:83053994-83054013 None:intergenic 25.0%
! ACAATGTAGCTTATTGTTAA+TGG + chr6_1:83054047-83054066 Msa0895340:intron 25.0%
! GAGAAGAATACTAATAATGA+TGG + chr6_1:83054301-83054320 Msa0895340:CDS 25.0%
! AAGAATACTAATAATGATGG+TGG + chr6_1:83054304-83054323 Msa0895340:CDS 25.0%
!!! ATTAAGTATGTTTGCTTTTG+TGG + chr6_1:83054904-83054923 Msa0895340:CDS 25.0%
!!! TTAAGTATGTTTGCTTTTGT+GGG + chr6_1:83054905-83054924 Msa0895340:CDS 25.0%
!! AATGTGAATTTTTACCAAGT+CGG + chr6_1:83055447-83055466 Msa0895340:CDS 25.0%
! TTAATATTATTTGAGCCACA+AGG - chr6_1:83056142-83056161 None:intergenic 25.0%
! ACAAGAACAAGTAATTGTAA+CGG - chr6_1:83056380-83056399 None:intergenic 25.0%
! AGATGCAAAATATTAGTACT+TGG + chr6_1:83056724-83056743 Msa0895340:three_prime_UTR 25.0%
! GATGCAAAATATTAGTACTT+GGG + chr6_1:83056725-83056744 Msa0895340:three_prime_UTR 25.0%
!! TCTCTTTTATCCTTTATCAT+AGG - chr6_1:83056796-83056815 None:intergenic 25.0%
! TTTAAGCATTTACCTAAATG+AGG - chr6_1:83057783-83057802 None:intergenic 25.0%
!! TTTTAGTTAAGGGAGAATTG+TGG + chr6_1:83053140-83053159 Msa0895340:intron 30.0%
TTTAGTTAAGGGAGAATTGT+GGG + chr6_1:83053141-83053160 Msa0895340:intron 30.0%
TTGAATTTAGGGAAGAAATG+AGG + chr6_1:83053244-83053263 Msa0895340:intron 30.0%
TGAATTTAGGGAAGAAATGA+GGG + chr6_1:83053245-83053264 Msa0895340:intron 30.0%
! TTGTTAGAGTTTTGCATTTC+TGG + chr6_1:83053444-83053463 Msa0895340:intron 30.0%
TGGGTAGTTGAATTAATTCA+TGG + chr6_1:83053482-83053501 Msa0895340:intron 30.0%
!!! GTAGTTTTGATTTTTTGGGT+TGG + chr6_1:83053576-83053595 Msa0895340:intron 30.0%
! TGTTGATTGAACTTATCGTT+AGG + chr6_1:83053676-83053695 Msa0895340:intron 30.0%
GTTGATTGAACTTATCGTTA+GGG + chr6_1:83053677-83053696 Msa0895340:intron 30.0%
!!! ATCGTTAGGGTTTTGAATTT+TGG + chr6_1:83053690-83053709 Msa0895340:intron 30.0%
!!! AGGGTTTTGAATTTTGGTTT+AGG + chr6_1:83053696-83053715 Msa0895340:intron 30.0%
! TTTGGTTTAGGTAAGAATTG+AGG + chr6_1:83053708-83053727 Msa0895340:intron 30.0%
TTGGTTTAGGTAAGAATTGA+GGG + chr6_1:83053709-83053728 Msa0895340:intron 30.0%
TGAGGGATAGTTTAATATTG+TGG + chr6_1:83053726-83053745 Msa0895340:intron 30.0%
!! TGAATTTTGGGAAGAAATGT+TGG + chr6_1:83053818-83053837 Msa0895340:intron 30.0%
!! GAATTTTGGGAAGAAATGTT+GGG + chr6_1:83053819-83053838 Msa0895340:intron 30.0%
!! GTGCATGATTTGTTATGATA+TGG + chr6_1:83054705-83054724 Msa0895340:CDS 30.0%
! TTTGTTATGATATGGTTCGT+AGG + chr6_1:83054713-83054732 Msa0895340:CDS 30.0%
TTAAATACAAATCAGACGGA+GGG - chr6_1:83054942-83054961 None:intergenic 30.0%
GGTGTTAAATACAAATCAGA+CGG - chr6_1:83054946-83054965 None:intergenic 30.0%
!!! ATGACACAGGTTATTTTTTG+TGG + chr6_1:83055297-83055316 Msa0895340:CDS 30.0%
!!! TGACACAGGTTATTTTTTGT+GGG + chr6_1:83055298-83055317 Msa0895340:CDS 30.0%
! ATGTGAATTTTTACCAAGTC+GGG + chr6_1:83055448-83055467 Msa0895340:CDS 30.0%
AACGACATTTCTGTGAAATT+AGG - chr6_1:83055634-83055653 None:intergenic 30.0%
! AAATAATGGTTTGACTAGTC+CGG + chr6_1:83055793-83055812 Msa0895340:three_prime_UTR 30.0%
ATTAAATGCAATAATCCCTG+TGG + chr6_1:83056157-83056176 Msa0895340:three_prime_UTR 30.0%
GTTACAATTACTTGTTCTTG+TGG + chr6_1:83056379-83056398 Msa0895340:three_prime_UTR 30.0%
TTATCATAGGACAAAAGACA+TGG - chr6_1:83056783-83056802 None:intergenic 30.0%
! TGTCTTTTGTCCTATGATAA+AGG + chr6_1:83056783-83056802 Msa0895340:three_prime_UTR 30.0%
GATAAAGGATAAAAGAGATG+CGG + chr6_1:83056798-83056817 Msa0895340:three_prime_UTR 30.0%
GAAATTACGATGAATCTCTT+TGG - chr6_1:83056877-83056896 None:intergenic 30.0%
!! TGAGGTTATTTTCCTCATTT+AGG + chr6_1:83057768-83057787 Msa0895340:three_prime_UTR 30.0%
GCTTAAAAGTTCAAACTCAT+TGG + chr6_1:83057796-83057815 Msa0895340:three_prime_UTR 30.0%
CTCTTGTGACACAAACATAA+AGG + chr6_1:83052793-83052812 Msa0895340:CDS 35.0%
GAATTGAGAAACAAGCAGTT+TGG - chr6_1:83052911-83052930 None:intergenic 35.0%
TTAGTTAAGGGAGAATTGTG+GGG + chr6_1:83053142-83053161 Msa0895340:intron 35.0%
TGAAGGGTAGTTGAATATTG+TGG + chr6_1:83053607-83053626 Msa0895340:intron 35.0%
! TGTTGGGTAGTTGAATTTTG+TGG + chr6_1:83053835-83053854 Msa0895340:intron 35.0%
!! TTTGAATTTTGGGTGCAGAA+GGG + chr6_1:83054070-83054089 Msa0895340:intron 35.0%
TAATCACCATGTTGCTCATA+GGG + chr6_1:83054375-83054394 Msa0895340:CDS 35.0%
ATGAAAGATAGAGTAGCAAC+TGG - chr6_1:83054761-83054780 None:intergenic 35.0%
ATCTGAATTGCATCAAGAAG+TGG + chr6_1:83054779-83054798 Msa0895340:CDS 35.0%
TCTGAATTGCATCAAGAAGT+GGG + chr6_1:83054780-83054799 Msa0895340:CDS 35.0%
! AGAAGAATCTAGGGTTTAAC+TGG + chr6_1:83054836-83054855 Msa0895340:CDS 35.0%
GTTAAATACAAATCAGACGG+AGG - chr6_1:83054943-83054962 None:intergenic 35.0%
TATTTAACACCTCATTCGTG+TGG + chr6_1:83054955-83054974 Msa0895340:CDS 35.0%
! GTTTGTTACTGAAGAGAGAA+AGG + chr6_1:83055011-83055030 Msa0895340:CDS 35.0%
! CAATTCTTTTCTTCCCACAA+GGG - chr6_1:83055122-83055141 None:intergenic 35.0%
TGTGATAAGCTTCTTGATTG+TGG + chr6_1:83055189-83055208 Msa0895340:CDS 35.0%
! CATTTTACTGCAAAAGCAAG+AGG - chr6_1:83055280-83055299 None:intergenic 35.0%
! CTTTTGCAGTAAAATGACAC+AGG + chr6_1:83055284-83055303 Msa0895340:CDS 35.0%
!!! GACACAGGTTATTTTTTGTG+GGG + chr6_1:83055299-83055318 Msa0895340:CDS 35.0%
! AAAGGTGAATTTGAAGCAGA+AGG + chr6_1:83055333-83055352 Msa0895340:CDS 35.0%
! AAGGTGAATTTGAAGCAGAA+GGG + chr6_1:83055334-83055353 Msa0895340:CDS 35.0%
! TTTTCTTGTGGTTCCAATTG+TGG + chr6_1:83055362-83055381 Msa0895340:CDS 35.0%
TGTGAAATTAGGACCTTACA+TGG - chr6_1:83055623-83055642 None:intergenic 35.0%
ATTTCACAGAAATGTCGTTG+TGG + chr6_1:83055635-83055654 Msa0895340:exon 35.0%
TTTATAGCATTCCACAGTTC+TGG - chr6_1:83055669-83055688 None:intergenic 35.0%
! GACAACACTTTTCACTACAT+CGG - chr6_1:83055760-83055779 None:intergenic 35.0%
!! GGACTAGTCAAACCATTATT+TGG - chr6_1:83055794-83055813 None:intergenic 35.0%
AGATTGTTTCAAGACAAGGT+GGG - chr6_1:83055910-83055929 None:intergenic 35.0%
AAGATTGTTTCAAGACAAGG+TGG - chr6_1:83055911-83055930 None:intergenic 35.0%
GTGAAGATTGTTTCAAGACA+AGG - chr6_1:83055914-83055933 None:intergenic 35.0%
GTATGTTCCTAAGAATGACA+TGG - chr6_1:83056120-83056139 None:intergenic 35.0%
ATTCTTAGGAACATACCTTG+TGG + chr6_1:83056124-83056143 Msa0895340:three_prime_UTR 35.0%
TCGTAAACCTTTCACAATAC+CGG - chr6_1:83056251-83056270 None:intergenic 35.0%
GAGAATTCACATCTTACATC+GGG - chr6_1:83056358-83056377 None:intergenic 35.0%
GGAGAATTCACATCTTACAT+CGG - chr6_1:83056359-83056378 None:intergenic 35.0%
! AAGGAACATTTGCTGATATG+CGG - chr6_1:83056405-83056424 None:intergenic 35.0%
TTATTACCACCAACATCACA+AGG - chr6_1:83056424-83056443 None:intergenic 35.0%
! TTTGTCCAAGAGGAACTTTT+TGG - chr6_1:83056531-83056550 None:intergenic 35.0%
! ATCAGTTTTCTTTGTCCAAG+AGG - chr6_1:83056541-83056560 None:intergenic 35.0%
AAGAAGAATTCTCACCGAAA+TGG - chr6_1:83056645-83056664 None:intergenic 35.0%
TTAGTACTTGGGAAAAGCAA+AGG + chr6_1:83056736-83056755 Msa0895340:three_prime_UTR 35.0%
AAAAGCAAAGGAACTACACA+TGG + chr6_1:83056748-83056767 Msa0895340:three_prime_UTR 35.0%
TGAGAATGATTGCTGAAAGA+TGG + chr6_1:83056821-83056840 Msa0895340:three_prime_UTR 35.0%
AAGAATCTTCTTTCCAACCT+GGG - chr6_1:83057323-83057342 None:intergenic 35.0%
AGGTTGGAAAGAAGATTCTT+GGG + chr6_1:83057323-83057342 Msa0895340:three_prime_UTR 35.0%
TCATGATTCAGAACATTCCA+AGG - chr6_1:83057438-83057457 None:intergenic 35.0%
TGCTGAAGTTGTAGATGATT+GGG + chr6_1:83057596-83057615 Msa0895340:three_prime_UTR 35.0%
TTGAAAAGTAGACATGCATG+AGG + chr6_1:83057703-83057722 Msa0895340:three_prime_UTR 35.0%
! TTGCCATGTTTTGTCAGTTT+TGG + chr6_1:83057740-83057759 Msa0895340:three_prime_UTR 35.0%
TTGCCAAAACTGACAAAACA+TGG - chr6_1:83057746-83057765 None:intergenic 35.0%
! CAATGGGGTATTTGACTAAA+GGG + chr6_1:83057839-83057858 Msa0895340:three_prime_UTR 35.0%
ATAGATACCTTGACGAGAAG+AGG - chr6_1:83052938-83052957 None:intergenic 40.0%
TGTGGGGTAGTTGAATATTG+TGG + chr6_1:83053158-83053177 Msa0895340:intron 40.0%
TGAGGGGTAGTTGAATATTG+TGG + chr6_1:83053337-83053356 Msa0895340:intron 40.0%
!!! AGAGTTTTGCATTTCTGGTC+AGG + chr6_1:83053449-83053468 Msa0895340:intron 40.0%
!!! GAGTTTTGCATTTCTGGTCA+GGG + chr6_1:83053450-83053469 Msa0895340:intron 40.0%
!! TTGGGTTGGGAAAGAATTGA+AGG + chr6_1:83053590-83053609 Msa0895340:intron 40.0%
! TGGGTTGGGAAAGAATTGAA+GGG + chr6_1:83053591-83053610 Msa0895340:intron 40.0%
! TGGGTTAGAGAACAATTGAG+TGG + chr6_1:83053925-83053944 Msa0895340:intron 40.0%
!! GTTTGAATTTTGGGTGCAGA+AGG + chr6_1:83054069-83054088 Msa0895340:intron 40.0%
! TCATGAGAGTGCAAACTTGT+AGG - chr6_1:83054283-83054302 None:intergenic 40.0%
CTTCTATGCCTAGCAAATGT+TGG - chr6_1:83054355-83054374 None:intergenic 40.0%
GTAATCACCATGTTGCTCAT+AGG + chr6_1:83054374-83054393 Msa0895340:CDS 40.0%
AAAGGGAACATGTTGCTCAT+AGG + chr6_1:83054401-83054420 Msa0895340:CDS 40.0%
ACAGGAATCATGTTTCTCAG+AGG + chr6_1:83054428-83054447 Msa0895340:CDS 40.0%
CAGGAATCATGTTTCTCAGA+GGG + chr6_1:83054429-83054448 Msa0895340:CDS 40.0%
ATGTTGCTCATAGGGTTGAA+AGG + chr6_1:83054572-83054591 Msa0895340:CDS 40.0%
TGTTGCTCATAGGGTTGAAA+GGG + chr6_1:83054573-83054592 Msa0895340:CDS 40.0%
TGAATCTCCTGCACTAATTG+AGG - chr6_1:83054658-83054677 None:intergenic 40.0%
TCAATTAGTGCAGGAGATTC+AGG + chr6_1:83054657-83054676 Msa0895340:CDS 40.0%
! ACCCACCTCAGTTGATTTAT+CGG + chr6_1:83054810-83054829 Msa0895340:CDS 40.0%
! AGAATCTAGGGTTTAACTGG+CGG + chr6_1:83054839-83054858 Msa0895340:CDS 40.0%
TGTGCAACATACGTCTTCAA+AGG + chr6_1:83054879-83054898 Msa0895340:CDS 40.0%
!! ATGTTTGCTTTTGTGGGAAG+AGG + chr6_1:83054911-83054930 Msa0895340:CDS 40.0%
!! TGTTTGCTTTTGTGGGAAGA+GGG + chr6_1:83054912-83054931 Msa0895340:CDS 40.0%
!! ACAAACACCTCCTTTTCAAG+AGG - chr6_1:83054997-83055016 None:intergenic 40.0%
ATTGCAAGACACAAGCATGA+GGG - chr6_1:83055047-83055066 None:intergenic 40.0%
! GCAATTCTTTTCTTCCCACA+AGG - chr6_1:83055123-83055142 None:intergenic 40.0%
TTGTGAAAATGCATGCCATG+TGG + chr6_1:83055221-83055240 Msa0895340:CDS 40.0%
TGTGAAAATGCATGCCATGT+GGG + chr6_1:83055222-83055241 Msa0895340:CDS 40.0%
!!! GGTTATTTTTTGTGGGGAGA+TGG + chr6_1:83055305-83055324 Msa0895340:CDS 40.0%
! AGGTGAATTTGAAGCAGAAG+GGG + chr6_1:83055335-83055354 Msa0895340:CDS 40.0%
!!! AGAAGGGGAGTTTTTTCTTG+TGG + chr6_1:83055350-83055369 Msa0895340:CDS 40.0%
TCCAATTGTGGAAATGTGCT+TGG + chr6_1:83055374-83055393 Msa0895340:CDS 40.0%
CAGTAATCATATCTGTCGTG+AGG + chr6_1:83055400-83055419 Msa0895340:CDS 40.0%
CTGTTGTGGGAAAACAAAGT+TGG + chr6_1:83055481-83055500 Msa0895340:CDS 40.0%
TTGTGGGAAAACAAAGTTGG+AGG + chr6_1:83055484-83055503 Msa0895340:CDS 40.0%
! ACTTTTGAGCAGGTAGGAAT+TGG - chr6_1:83055533-83055552 None:intergenic 40.0%
GAAATTAGGACCTTACATGG+TGG - chr6_1:83055620-83055639 None:intergenic 40.0%
TTTACTTGTCAAAAGCCGTG+TGG + chr6_1:83055710-83055729 Msa0895340:three_prime_UTR 40.0%
TTACTTGTCAAAAGCCGTGT+GGG + chr6_1:83055711-83055730 Msa0895340:three_prime_UTR 40.0%
!! GAAAAGTGTTGTCCATTGTC+TGG + chr6_1:83055767-83055786 Msa0895340:three_prime_UTR 40.0%
CCATTATTTGGACCAGACAA+TGG - chr6_1:83055782-83055801 None:intergenic 40.0%
CCATTGTCTGGTCCAAATAA+TGG + chr6_1:83055779-83055798 Msa0895340:three_prime_UTR 40.0%
! ACTTTTGTTCCATGCTGTGT+GGG + chr6_1:83055828-83055847 Msa0895340:three_prime_UTR 40.0%
TGTGAAACGTTGTGTCATAG+TGG + chr6_1:83055878-83055897 Msa0895340:three_prime_UTR 40.0%
! ACTGATTTAGCATGTGCTTG+TGG + chr6_1:83055932-83055951 Msa0895340:three_prime_UTR 40.0%
CCTGTGTCAAAAGAATGTGT+CGG + chr6_1:83056091-83056110 Msa0895340:three_prime_UTR 40.0%
AATGCAATAATCCCTGTGGA+AGG + chr6_1:83056161-83056180 Msa0895340:three_prime_UTR 40.0%
ATACCGGGTAGAATATCACA+AGG - chr6_1:83056235-83056254 None:intergenic 40.0%
ATTCTACCCGGTATTGTGAA+AGG + chr6_1:83056241-83056260 Msa0895340:three_prime_UTR 40.0%
CGTAAACCTTTCACAATACC+GGG - chr6_1:83056250-83056269 None:intergenic 40.0%
GCAAATGTTCCTTGTGATGT+TGG + chr6_1:83056412-83056431 Msa0895340:three_prime_UTR 40.0%
AATGTTCCTTGTGATGTTGG+TGG + chr6_1:83056415-83056434 Msa0895340:three_prime_UTR 40.0%
AATGGCCAAAAAGTTCCTCT+TGG + chr6_1:83056523-83056542 Msa0895340:three_prime_UTR 40.0%
AAGAAAACTGATGTGTGACG+AGG + chr6_1:83056549-83056568 Msa0895340:three_prime_UTR 40.0%
! TGCTAAGTTGGAGCGTAAAA+GGG + chr6_1:83056576-83056595 Msa0895340:three_prime_UTR 40.0%
AAGACTTGGAGTGATGTCAA+AGG - chr6_1:83056614-83056633 None:intergenic 40.0%
!! AAATGGAGAGCATCAAGACT+TGG - chr6_1:83056628-83056647 None:intergenic 40.0%
AGTCTTGATGCTCTCCATTT+CGG + chr6_1:83056628-83056647 Msa0895340:three_prime_UTR 40.0%
GTTTAGACGTGATCCAAAGT+GGG + chr6_1:83056684-83056703 Msa0895340:three_prime_UTR 40.0%
TCAATAGCCAAAACCCACTT+TGG - chr6_1:83056700-83056719 None:intergenic 40.0%
!!! AAAGTGGGTTTTGGCTATTG+AGG + chr6_1:83056699-83056718 Msa0895340:three_prime_UTR 40.0%
!! TGGGGTCTTAGATTTTTGAG+TGG - chr6_1:83056902-83056921 None:intergenic 40.0%
ATTTGATCCCTTGGTTGACA+TGG + chr6_1:83056978-83056997 Msa0895340:three_prime_UTR 40.0%
!!! AGTGCCTTGGTTTTGAGATT+CGG + chr6_1:83057051-83057070 Msa0895340:three_prime_UTR 40.0%
GATCACGGAACAGTTTATCA+GGG + chr6_1:83057165-83057184 Msa0895340:three_prime_UTR 40.0%
CAAGAATCTTCTTTCCAACC+TGG - chr6_1:83057324-83057343 None:intergenic 40.0%
! CAGGTTGGAAAGAAGATTCT+TGG + chr6_1:83057322-83057341 Msa0895340:three_prime_UTR 40.0%
GGTTGGAAAGAAGATTCTTG+GGG + chr6_1:83057324-83057343 Msa0895340:three_prime_UTR 40.0%
TTGGATATTCGCAGAATCAC+CGG - chr6_1:83057370-83057389 None:intergenic 40.0%
TTCTGCGAATATCCAACCAT+CGG + chr6_1:83057374-83057393 Msa0895340:three_prime_UTR 40.0%
GGATTCAATGAAGCAGGTAT+TGG - chr6_1:83057417-83057436 None:intergenic 40.0%
TACCTGCTTCATTGAATCCT+TGG + chr6_1:83057418-83057437 Msa0895340:three_prime_UTR 40.0%
TTCCAAGGATTCAATGAAGC+AGG - chr6_1:83057423-83057442 None:intergenic 40.0%
! ATCGAGTTCGAGTTCATCAT+CGG + chr6_1:83057458-83057477 Msa0895340:three_prime_UTR 40.0%
! GTCATAAGAAGTGTAGCTTC+TGG + chr6_1:83057486-83057505 Msa0895340:three_prime_UTR 40.0%
CTGCTGAAGTTGTAGATGAT+TGG + chr6_1:83057595-83057614 Msa0895340:three_prime_UTR 40.0%
AGTTGTAGATGATTGGGAGA+AGG + chr6_1:83057602-83057621 Msa0895340:three_prime_UTR 40.0%
GTAGACATGCATGAGGTTTA+TGG + chr6_1:83057710-83057729 Msa0895340:three_prime_UTR 40.0%
!! TTGTCAGTTTTGGCAAGTTG+AGG + chr6_1:83057750-83057769 Msa0895340:three_prime_UTR 40.0%
! GCAATGGGGTATTTGACTAA+AGG + chr6_1:83057838-83057857 Msa0895340:three_prime_UTR 40.0%
TTCTCTTCCTCTTCTCGTCA+AGG + chr6_1:83052928-83052947 Msa0895340:CDS 45.0%
!! TTTGCATTTCTGGTCAGGGA+AGG + chr6_1:83053454-83053473 Msa0895340:intron 45.0%
GTGTGTGTGACTTTGAGTGT+TGG + chr6_1:83053533-83053552 Msa0895340:intron 45.0%
GCTTGCAACAAAGACGAGAA+AGG + chr6_1:83054107-83054126 Msa0895340:CDS 45.0%
TGCAACAAAGACGAGAAAGG+AGG + chr6_1:83054110-83054129 Msa0895340:CDS 45.0%
GCAACAAAGACGAGAAAGGA+GGG + chr6_1:83054111-83054130 Msa0895340:CDS 45.0%
AAAGACGAGAAAGGAGGGAA+GGG + chr6_1:83054116-83054135 Msa0895340:CDS 45.0%
!! TGTAGGTTGGTCAACAGTTG+TGG - chr6_1:83054266-83054285 None:intergenic 45.0%
! GAGAGTGCAAACTTGTAGGT+TGG - chr6_1:83054279-83054298 None:intergenic 45.0%
! GATGGTGGTTCATCCAATCA+AGG + chr6_1:83054319-83054338 Msa0895340:CDS 45.0%
CTGTTGCTCCAACATTTGCT+AGG + chr6_1:83054344-83054363 Msa0895340:CDS 45.0%
TTTCCACCCTATGAGCAACA+TGG - chr6_1:83054384-83054403 None:intergenic 45.0%
ATGTTGCTCATAGGGTGGAA+AGG + chr6_1:83054383-83054402 Msa0895340:CDS 45.0%
TGTTGCTCATAGGGTGGAAA+GGG + chr6_1:83054384-83054403 Msa0895340:CDS 45.0%
GGAACATGTTGCTCATAGGA+TGG + chr6_1:83054405-83054424 Msa0895340:CDS 45.0%
ATGTTGCTCATAGGATGGAC+AGG + chr6_1:83054410-83054429 Msa0895340:CDS 45.0%
GAATCATGTTTCTCAGAGGG+TGG + chr6_1:83054432-83054451 Msa0895340:CDS 45.0%
!! ATGCTGCTCATCGAGTTGAA+AGG + chr6_1:83054491-83054510 Msa0895340:CDS 45.0%
!! TGCTGCTCATCGAGTTGAAA+GGG + chr6_1:83054492-83054511 Msa0895340:CDS 45.0%
AAAGGGAACATGTTGCTCAG+AGG + chr6_1:83054509-83054528 Msa0895340:CDS 45.0%
AAGGGAACATGTTGCTCAGA+GGG + chr6_1:83054510-83054529 Msa0895340:CDS 45.0%
AGAGGGAACATGTTGCTCAT+AGG + chr6_1:83054536-83054555 Msa0895340:CDS 45.0%
GAGGGAACATGTTGCTCATA+GGG + chr6_1:83054564-83054583 Msa0895340:CDS 45.0%
GTTGCTCATAGGGTTGAAAG+GGG + chr6_1:83054574-83054593 Msa0895340:CDS 45.0%
ATAGGGTTGAAAGGGGTAGA+GGG + chr6_1:83054581-83054600 Msa0895340:CDS 45.0%
! AATATGGTGGGGAGGCAATA+TGG + chr6_1:83054613-83054632 Msa0895340:CDS 45.0%
! TAGCTTGCCTCAATTAGTGC+AGG + chr6_1:83054648-83054667 Msa0895340:CDS 45.0%
ATTCAGGAGAAGCTCACGAA+AGG + chr6_1:83054673-83054692 Msa0895340:CDS 45.0%
GCCGATAAATCAACTGAGGT+GGG - chr6_1:83054814-83054833 None:intergenic 45.0%
! CACCTCAGTTGATTTATCGG+CGG + chr6_1:83054813-83054832 Msa0895340:CDS 45.0%
TTATCGGCGGAGAAGAATCT+AGG + chr6_1:83054826-83054845 Msa0895340:CDS 45.0%
TATCGGCGGAGAAGAATCTA+GGG + chr6_1:83054827-83054846 Msa0895340:CDS 45.0%
CATTGCAAGACACAAGCATG+AGG - chr6_1:83055048-83055067 None:intergenic 45.0%
TTGTGTCTTGCAATGCCATC+CGG + chr6_1:83055053-83055072 Msa0895340:CDS 45.0%
TTGCTACTCGCTGTTCTGAT+CGG + chr6_1:83055139-83055158 Msa0895340:CDS 45.0%
TCCTTGTCAGGTGCTAATTG+AGG + chr6_1:83055254-83055273 Msa0895340:CDS 45.0%
GCCAAGCACATTTCCACAAT+TGG - chr6_1:83055378-83055397 None:intergenic 45.0%
! CTGCATACTTTTGAGCAGGT+AGG - chr6_1:83055539-83055558 None:intergenic 45.0%
! CTTGCTGCATACTTTTGAGC+AGG - chr6_1:83055543-83055562 None:intergenic 45.0%
TTGTGGGGTACATGCTTGTA+AGG + chr6_1:83055571-83055590 Msa0895340:CDS 45.0%
TACTTGTCAAAAGCCGTGTG+GGG + chr6_1:83055712-83055731 Msa0895340:three_prime_UTR 45.0%
CAATTCTTCTTTGCCCCACA+CGG - chr6_1:83055728-83055747 None:intergenic 45.0%
TGTGGGGCAAAGAAGAATTG+TGG + chr6_1:83055728-83055747 Msa0895340:three_prime_UTR 45.0%
GGGCAAAGAAGAATTGTGGA+AGG + chr6_1:83055732-83055751 Msa0895340:three_prime_UTR 45.0%
! ATGGTTTGACTAGTCCGGAT+TGG + chr6_1:83055798-83055817 Msa0895340:three_prime_UTR 45.0%
! TGGTTTGACTAGTCCGGATT+GGG + chr6_1:83055799-83055818 Msa0895340:three_prime_UTR 45.0%
CAAAAGTGAGGATCCCAATC+CGG - chr6_1:83055815-83055834 None:intergenic 45.0%
CACAGCATGGAACAAAAGTG+AGG - chr6_1:83055827-83055846 None:intergenic 45.0%
! CACTTTTGTTCCATGCTGTG+TGG + chr6_1:83055827-83055846 Msa0895340:three_prime_UTR 45.0%
ACAACGTTTCACACACATGC+TGG - chr6_1:83055871-83055890 None:intergenic 45.0%
! CCGACACATTCTTTTGACAC+AGG - chr6_1:83056094-83056113 None:intergenic 45.0%
GTGTCAAAAGAATGTGTCGG+TGG + chr6_1:83056094-83056113 Msa0895340:three_prime_UTR 45.0%
CATTGTCTAGTCCTTCCACA+GGG - chr6_1:83056175-83056194 None:intergenic 45.0%
TGTGGAAGGACTAGACAATG+CGG + chr6_1:83056175-83056194 Msa0895340:three_prime_UTR 45.0%
CAATGCGGTTTACATGCATG+TGG + chr6_1:83056190-83056209 Msa0895340:three_prime_UTR 45.0%
GGGTAGAATATCACAAGGTG+GGG - chr6_1:83056230-83056249 None:intergenic 45.0%
CGGGTAGAATATCACAAGGT+GGG - chr6_1:83056231-83056250 None:intergenic 45.0%
CCACCTTGTGATATTCTACC+CGG + chr6_1:83056229-83056248 Msa0895340:three_prime_UTR 45.0%
AGAGAGCCATACACATATGC+CGG - chr6_1:83056315-83056334 None:intergenic 45.0%
TCACATCTTACATCGGGACA+AGG - chr6_1:83056352-83056371 None:intergenic 45.0%
!! TTTGCATCGACTGGTTGAAG+AGG - chr6_1:83056505-83056524 None:intergenic 45.0%
CTTCAACCAGTCGATGCAAA+TGG + chr6_1:83056505-83056524 Msa0895340:three_prime_UTR 45.0%
!! TTTTGGCCATTTGCATCGAC+TGG - chr6_1:83056514-83056533 None:intergenic 45.0%
TGACGAGGAATGTGCTAAGT+TGG + chr6_1:83056564-83056583 Msa0895340:three_prime_UTR 45.0%
! GTGCTAAGTTGGAGCGTAAA+AGG + chr6_1:83056575-83056594 Msa0895340:three_prime_UTR 45.0%
CGTTTAGACGTGATCCAAAG+TGG + chr6_1:83056683-83056702 Msa0895340:three_prime_UTR 45.0%
!! ACGTGATCCAAAGTGGGTTT+TGG + chr6_1:83056690-83056709 Msa0895340:three_prime_UTR 45.0%
GGATCAAATGCAGTAGGAAG+CGG - chr6_1:83056967-83056986 None:intergenic 45.0%
TCCTACTGCATTTGATCCCT+TGG + chr6_1:83056969-83056988 Msa0895340:three_prime_UTR 45.0%
ACCAAGGGATCAAATGCAGT+AGG - chr6_1:83056973-83056992 None:intergenic 45.0%
ACCACCGAATCTCAAAACCA+AGG - chr6_1:83057058-83057077 None:intergenic 45.0%
! GTGGTGAATGTGAGCTTGTT+TGG + chr6_1:83057073-83057092 Msa0895340:three_prime_UTR 45.0%
! AGCTTGTTTGGTTGAACGAC+AGG + chr6_1:83057085-83057104 Msa0895340:three_prime_UTR 45.0%
GTTGAACGACAGGAATGCTT+TGG + chr6_1:83057095-83057114 Msa0895340:three_prime_UTR 45.0%
GGATCACGGAACAGTTTATC+AGG + chr6_1:83057164-83057183 Msa0895340:three_prime_UTR 45.0%
GTTTCGTTTGTCCAGAATGC+TGG + chr6_1:83057192-83057211 Msa0895340:three_prime_UTR 45.0%
GACTTCGGTTACTAGTGCTT+GGG + chr6_1:83057227-83057246 Msa0895340:three_prime_UTR 45.0%
ACTTCGGTTACTAGTGCTTG+GGG + chr6_1:83057228-83057247 Msa0895340:three_prime_UTR 45.0%
ATTCTTGGGGCGATGAACAA+TGG + chr6_1:83057337-83057356 Msa0895340:three_prime_UTR 45.0%
GATGAACAATGGACCACTAC+CGG + chr6_1:83057348-83057367 Msa0895340:three_prime_UTR 45.0%
CTTTCTTCAGAACCGATGGT+TGG - chr6_1:83057389-83057408 None:intergenic 45.0%
GCTTCTTTCTTCAGAACCGA+TGG - chr6_1:83057393-83057412 None:intergenic 45.0%
AAGCAGCGATGTCTCAACTA+AGG + chr6_1:83057521-83057540 Msa0895340:three_prime_UTR 45.0%
TCTTACCCAGACTGAGCAAT+GGG + chr6_1:83057823-83057842 Msa0895340:three_prime_UTR 45.0%
AATACCCCATTGCTCAGTCT+GGG - chr6_1:83057831-83057850 None:intergenic 45.0%
AAATACCCCATTGCTCAGTC+TGG - chr6_1:83057832-83057851 None:intergenic 45.0%
!!! TTTTTTTTATTTTTATTTTG+AGG + chr6_1:83054023-83054042 Msa0895340:intron 5.0%
TCTGGTCAGGGAAGGATTGA+TGG + chr6_1:83053462-83053481 Msa0895340:intron 50.0%
CTGGTCAGGGAAGGATTGAT+GGG + chr6_1:83053463-83053482 Msa0895340:intron 50.0%
TTTGGGTGCAGAAGGGACAT+TGG + chr6_1:83054077-83054096 Msa0895340:intron 50.0%
CAAAGACGAGAAAGGAGGGA+AGG + chr6_1:83054115-83054134 Msa0895340:CDS 50.0%
TTCGGAATCCATTCTTGGCG+AGG - chr6_1:83054166-83054185 None:intergenic 50.0%
! CGCCAAGAATGGATTCCGAA+AGG + chr6_1:83054166-83054185 Msa0895340:CDS 50.0%
CGCCTTTCGGAATCCATTCT+TGG - chr6_1:83054171-83054190 None:intergenic 50.0%
TTGGTCAACAGTTGTGGTGG+TGG - chr6_1:83054260-83054279 None:intergenic 50.0%
! AGGTTGGTCAACAGTTGTGG+TGG - chr6_1:83054263-83054282 None:intergenic 50.0%
TGGAGCAACAGCTCCTTGAT+TGG - chr6_1:83054335-83054354 None:intergenic 50.0%
TCACCATGTTGCTCATAGGG+TGG + chr6_1:83054378-83054397 Msa0895340:CDS 50.0%
ATGTTTCTCAGAGGGTGGAG+AGG + chr6_1:83054437-83054456 Msa0895340:CDS 50.0%
TGTTTCTCAGAGGGTGGAGA+GGG + chr6_1:83054438-83054457 Msa0895340:CDS 50.0%
GGAACATGTTGCTCATCGTG+TGG + chr6_1:83054540-83054559 Msa0895340:CDS 50.0%
ATGTTGCTCATCGTGTGGAG+AGG + chr6_1:83054545-83054564 Msa0895340:CDS 50.0%
TGTTGCTCATCGTGTGGAGA+GGG + chr6_1:83054546-83054565 Msa0895340:CDS 50.0%
CATAGGGTTGAAAGGGGTAG+AGG + chr6_1:83054580-83054599 Msa0895340:CDS 50.0%
TAGAGGGAGGAGTGGGAATA+TGG + chr6_1:83054597-83054616 Msa0895340:CDS 50.0%
!! GAAGCTCACGAAAGGTACTG+TGG + chr6_1:83054681-83054700 Msa0895340:CDS 50.0%
CAACTGGAGCAAGACCAGAT+AGG - chr6_1:83054745-83054764 None:intergenic 50.0%
CGCCGATAAATCAACTGAGG+TGG - chr6_1:83054815-83054834 None:intergenic 50.0%
CTCCGCCGATAAATCAACTG+AGG - chr6_1:83054818-83054837 None:intergenic 50.0%
TGTTGCACAGACTGACAACC+AGG - chr6_1:83054868-83054887 None:intergenic 50.0%
!! TTTTCAAGAGGCTTCCCGCA+TGG - chr6_1:83054985-83055004 None:intergenic 50.0%
ATGCGGGAAGCCTCTTGAAA+AGG + chr6_1:83054984-83055003 Msa0895340:CDS 50.0%
TGTGTCTTGCAATGCCATCC+GGG + chr6_1:83055054-83055073 Msa0895340:CDS 50.0%
AATGCTTTGCACGGAGGACA+TGG - chr6_1:83055081-83055100 None:intergenic 50.0%
AAGGATCACAAGGACCCACA+TGG - chr6_1:83055239-83055258 None:intergenic 50.0%
AGCACCTGACAAGGATCACA+AGG - chr6_1:83055249-83055268 None:intergenic 50.0%
GCCTCAATTAGCACCTGACA+AGG - chr6_1:83055258-83055277 None:intergenic 50.0%
TGTGGGGAGATGGCTATGAA+AGG + chr6_1:83055315-83055334 Msa0895340:CDS 50.0%
CTGTCGTGAGGTTTGTCATC+CGG + chr6_1:83055412-83055431 Msa0895340:CDS 50.0%
TGTCGTGAGGTTTGTCATCC+GGG + chr6_1:83055413-83055432 Msa0895340:CDS 50.0%
GGGTCAAGACATGCTGTTGT+GGG + chr6_1:83055468-83055487 Msa0895340:CDS 50.0%
GGATGAACGCAAGAGTTGTG+TGG + chr6_1:83055505-83055524 Msa0895340:CDS 50.0%
AGCATGTACCCCACAACGAA+GGG - chr6_1:83055567-83055586 None:intergenic 50.0%
AAGCATGTACCCCACAACGA+AGG - chr6_1:83055568-83055587 None:intergenic 50.0%
TGTAAGGAGACGTGCCATGT+CGG + chr6_1:83055587-83055606 Msa0895340:CDS 50.0%
TGGCTCAACTTCCAGAACTG+TGG + chr6_1:83055655-83055674 Msa0895340:three_prime_UTR 50.0%
TGTGGGAAGAAGCTGAGATG+TGG + chr6_1:83055845-83055864 Msa0895340:three_prime_UTR 50.0%
! AGGCATTGTACCGCAAGGTA+GGG - chr6_1:83055978-83055997 None:intergenic 50.0%
GAACATGGAAGCTGACACGA+GGG - chr6_1:83056001-83056020 None:intergenic 50.0%
CTCGTGTCAGCTTCCATGTT+CGG + chr6_1:83056000-83056019 Msa0895340:three_prime_UTR 50.0%
!! GGCTCTCATAGCTGCCATTT+TGG + chr6_1:83056046-83056065 Msa0895340:three_prime_UTR 50.0%
AAGGAGGGCAGTCTCCAAAA+TGG - chr6_1:83056063-83056082 None:intergenic 50.0%
!! TTTGACACAGGCACCGAACA+AGG - chr6_1:83056082-83056101 None:intergenic 50.0%
TCGGTGGCCATGTCATTCTT+AGG + chr6_1:83056110-83056129 Msa0895340:three_prime_UTR 50.0%
GCATTGTCTAGTCCTTCCAC+AGG - chr6_1:83056176-83056195 None:intergenic 50.0%
CCGGGTAGAATATCACAAGG+TGG - chr6_1:83056232-83056251 None:intergenic 50.0%
AAAGGTTTACGAGCGCCATG+TGG + chr6_1:83056259-83056278 Msa0895340:three_prime_UTR 50.0%
! TCGACTGGTTGAAGAGGCAT+GGG - chr6_1:83056499-83056518 None:intergenic 50.0%
! ATCGACTGGTTGAAGAGGCA+TGG - chr6_1:83056500-83056519 None:intergenic 50.0%
TAACACCAAGCACACGAGCT+GGG - chr6_1:83056921-83056940 None:intergenic 50.0%
TTAACACCAAGCACACGAGC+TGG - chr6_1:83056922-83056941 None:intergenic 50.0%
!! AGCTCGTGTGCTTGGTGTTA+AGG + chr6_1:83056921-83056940 Msa0895340:three_prime_UTR 50.0%
!! GCTCGTGTGCTTGGTGTTAA+GGG + chr6_1:83056922-83056941 Msa0895340:three_prime_UTR 50.0%
! AAGCGGCGCATTTAGAGTTG+TGG - chr6_1:83056950-83056969 None:intergenic 50.0%
TCTCGTTTCCAGACTTGCCA+AGG + chr6_1:83057016-83057035 Msa0895340:three_prime_UTR 50.0%
CTCGTTTCCAGACTTGCCAA+GGG + chr6_1:83057017-83057036 Msa0895340:three_prime_UTR 50.0%
GCACTAATATCAGCGTCCCT+TGG - chr6_1:83057036-83057055 None:intergenic 50.0%
GGACGCTGATATTAGTGCCT+TGG + chr6_1:83057038-83057057 Msa0895340:three_prime_UTR 50.0%
!!! GCCTTGGTTTTGAGATTCGG+TGG + chr6_1:83057054-83057073 Msa0895340:three_prime_UTR 50.0%
CGACTTCGGTTACTAGTGCT+TGG + chr6_1:83057226-83057245 Msa0895340:three_prime_UTR 50.0%
! AGAACCGCTGCCTTTTTCCA+TGG - chr6_1:83057297-83057316 None:intergenic 50.0%
ATTCGCAGAATCACCGGTAG+TGG - chr6_1:83057364-83057383 None:intergenic 50.0%
CAGCGATGTCTCAACTAAGG+TGG + chr6_1:83057524-83057543 Msa0895340:three_prime_UTR 50.0%
TGGCGCAAATGGAGGAAACT+CGG + chr6_1:83057560-83057579 Msa0895340:three_prime_UTR 50.0%
CATTGCTCAGTCTGGGTAAG+AGG - chr6_1:83057824-83057843 None:intergenic 50.0%
CTCTTACCCAGACTGAGCAA+TGG + chr6_1:83057822-83057841 Msa0895340:three_prime_UTR 50.0%
CTTACCCAGACTGAGCAATG+GGG + chr6_1:83057824-83057843 Msa0895340:three_prime_UTR 50.0%
TCCATTCTTGGCGAGGAGGA+CGG - chr6_1:83054159-83054178 None:intergenic 55.0%
GGAATCCATTCTTGGCGAGG+AGG - chr6_1:83054163-83054182 None:intergenic 55.0%
! GAATGGATTCCGAAAGGCGC+TGG + chr6_1:83054172-83054191 Msa0895340:CDS 55.0%
CTAGATGCTCCAGCGCCTTT+CGG - chr6_1:83054184-83054203 None:intergenic 55.0%
!! AACAGTTGTGGTGGTGGTGG+CGG - chr6_1:83054254-83054273 None:intergenic 55.0%
!! GTCAACAGTTGTGGTGGTGG+TGG - chr6_1:83054257-83054276 None:intergenic 55.0%
AGAGGGAACATGTTGCGCAC+AGG + chr6_1:83054455-83054474 Msa0895340:CDS 55.0%
GAGGGAACATGTTGCGCACA+GGG + chr6_1:83054456-83054475 Msa0895340:CDS 55.0%
GGAACATGTTGCTCAGAGGG+TGG + chr6_1:83054513-83054532 Msa0895340:CDS 55.0%
ATGTTGCTCAGAGGGTGGAG+AGG + chr6_1:83054518-83054537 Msa0895340:CDS 55.0%
TGTTGCTCAGAGGGTGGAGA+GGG + chr6_1:83054519-83054538 Msa0895340:CDS 55.0%
AAAGGGGTAGAGGGAGGAGT+GGG + chr6_1:83054590-83054609 Msa0895340:CDS 55.0%
AGGGAGGAGTGGGAATATGG+TGG + chr6_1:83054600-83054619 Msa0895340:CDS 55.0%
GGGAGGAGTGGGAATATGGT+GGG + chr6_1:83054601-83054620 Msa0895340:CDS 55.0%
GGAGGAGTGGGAATATGGTG+GGG + chr6_1:83054602-83054621 Msa0895340:CDS 55.0%
TGGGGAGGCAATATGGACCA+AGG + chr6_1:83054620-83054639 Msa0895340:CDS 55.0%
GGGGAGGCAATATGGACCAA+GGG + chr6_1:83054621-83054640 Msa0895340:CDS 55.0%
TGAGGCAAGCTAGAGTCCCT+TGG - chr6_1:83054640-83054659 None:intergenic 55.0%
TTCGTAGGTCTGCGCCTATC+TGG + chr6_1:83054728-83054747 Msa0895340:CDS 55.0%
CATGGTTCGCCACACGAATG+AGG - chr6_1:83054967-83054986 None:intergenic 55.0%
CATTCGTGTGGCGAACCATG+CGG + chr6_1:83054967-83054986 Msa0895340:CDS 55.0%
ATTCGTGTGGCGAACCATGC+GGG + chr6_1:83054968-83054987 Msa0895340:CDS 55.0%
CGGGAAGCCTCTTGAAAAGG+AGG + chr6_1:83054987-83055006 Msa0895340:CDS 55.0%
GGAGGGGCAAATGCTTTGCA+CGG - chr6_1:83055090-83055109 None:intergenic 55.0%
! ACAAGGGCACAAACGAGGAG+GGG - chr6_1:83055106-83055125 None:intergenic 55.0%
! CACAAGGGCACAAACGAGGA+GGG - chr6_1:83055107-83055126 None:intergenic 55.0%
CTCCTCGTTTGTGCCCTTGT+GGG + chr6_1:83055106-83055125 Msa0895340:CDS 55.0%
! TTCCCACAAGGGCACAAACG+AGG - chr6_1:83055111-83055130 None:intergenic 55.0%
TCGCTGTTCTGATCGGCAGT+CGG + chr6_1:83055146-83055165 Msa0895340:CDS 55.0%
GGGTCCTTGTGATCCTTGTC+AGG + chr6_1:83055242-83055261 Msa0895340:CDS 55.0%
GTTTGTCATCCGGGAAGCTG+CGG + chr6_1:83055422-83055441 Msa0895340:CDS 55.0%
TCACATTCACCGCAGCTTCC+CGG - chr6_1:83055434-83055453 None:intergenic 55.0%
CAGCATGTCTTGACCCGACT+TGG - chr6_1:83055464-83055483 None:intergenic 55.0%
CGGGTCAAGACATGCTGTTG+TGG + chr6_1:83055467-83055486 Msa0895340:CDS 55.0%
TGCAGCAAGACCCTTCGTTG+TGG + chr6_1:83055554-83055573 Msa0895340:CDS 55.0%
GCAGCAAGACCCTTCGTTGT+GGG + chr6_1:83055555-83055574 Msa0895340:CDS 55.0%
CAGCAAGACCCTTCGTTGTG+GGG + chr6_1:83055556-83055575 Msa0895340:CDS 55.0%
GTAAGGAGACGTGCCATGTC+GGG + chr6_1:83055588-83055607 Msa0895340:CDS 55.0%
TAAGGAGACGTGCCATGTCG+GGG + chr6_1:83055589-83055608 Msa0895340:CDS 55.0%
!! ATGGTGGACATTCCCCGACA+TGG - chr6_1:83055604-83055623 None:intergenic 55.0%
CGGGGAATGTCCACCATGTA+AGG + chr6_1:83055607-83055626 Msa0895340:CDS 55.0%
CAGCTTCTTCCCACACAGCA+TGG - chr6_1:83055840-83055859 None:intergenic 55.0%
ATTCCTCCTCCCCTACCTTG+CGG + chr6_1:83055965-83055984 Msa0895340:three_prime_UTR 55.0%
ATTGTACCGCAAGGTAGGGG+AGG - chr6_1:83055974-83055993 None:intergenic 55.0%
GGCATTGTACCGCAAGGTAG+GGG - chr6_1:83055977-83055996 None:intergenic 55.0%
!! GAGGCATTGTACCGCAAGGT+AGG - chr6_1:83055979-83055998 None:intergenic 55.0%
CGAACATGGAAGCTGACACG+AGG - chr6_1:83056002-83056021 None:intergenic 55.0%
TGAGAGCCTGAATGGCCACA+CGG - chr6_1:83056034-83056053 None:intergenic 55.0%
GGCAGCTATGAGAGCCTGAA+TGG - chr6_1:83056042-83056061 None:intergenic 55.0%
TGGAGACTGCCCTCCTTGTT+CGG + chr6_1:83056066-83056085 Msa0895340:three_prime_UTR 55.0%
!! ACACAGGCACCGAACAAGGA+GGG - chr6_1:83056078-83056097 None:intergenic 55.0%
GCACCACAAGTCTGTCCACA+TGG - chr6_1:83056277-83056296 None:intergenic 55.0%
GACAGACTTGTGGTGCTCCA+AGG + chr6_1:83056281-83056300 Msa0895340:three_prime_UTR 55.0%
ACTTGTGGTGCTCCAAGGAG+TGG + chr6_1:83056286-83056305 Msa0895340:three_prime_UTR 55.0%
TGGCTGCCGGCATATGTGTA+TGG + chr6_1:83056306-83056325 Msa0895340:three_prime_UTR 55.0%
TGTATGGCTCTCTGTCACCC+TGG + chr6_1:83056322-83056341 Msa0895340:three_prime_UTR 55.0%
CATCGGGACAAGGACATCCA+GGG - chr6_1:83056342-83056361 None:intergenic 55.0%
ACATCGGGACAAGGACATCC+AGG - chr6_1:83056343-83056362 None:intergenic 55.0%
AAGCTTGCAGTGAACGCTGC+TGG + chr6_1:83056844-83056863 Msa0895340:three_prime_UTR 55.0%
AACACCAAGCACACGAGCTG+GGG - chr6_1:83056920-83056939 None:intergenic 55.0%
GAAACGAGACAACAAGCCGC+GGG - chr6_1:83057005-83057024 None:intergenic 55.0%
GGAAACGAGACAACAAGCCG+CGG - chr6_1:83057006-83057025 None:intergenic 55.0%
TCCTCATCGCAGTTGCAGCT+CGG - chr6_1:83057140-83057159 None:intergenic 55.0%
TGCAACTGCGATGAGGAGGT+TGG + chr6_1:83057143-83057162 Msa0895340:three_prime_UTR 55.0%
GCGATGAGGAGGTTGGATCA+CGG + chr6_1:83057150-83057169 Msa0895340:three_prime_UTR 55.0%
CTGCAGATGCTCCAGCATTC+TGG - chr6_1:83057206-83057225 None:intergenic 55.0%
! TGGAGCATCTGCAGCGACTT+CGG + chr6_1:83057212-83057231 Msa0895340:three_prime_UTR 55.0%
TCGGTTACTAGTGCTTGGGG+AGG + chr6_1:83057231-83057250 Msa0895340:three_prime_UTR 55.0%
TGCTTGGGGAGGAACGAAAG+AGG + chr6_1:83057242-83057261 Msa0895340:three_prime_UTR 55.0%
GCTTGGGGAGGAACGAAAGA+GGG + chr6_1:83057243-83057262 Msa0895340:three_prime_UTR 55.0%
ACTAAGGTGGAGCCTTCTGC+AGG + chr6_1:83057537-83057556 Msa0895340:three_prime_UTR 55.0%
GAGAAAGGAGGGAAGGGTCG+AGG + chr6_1:83054122-83054141 Msa0895340:CDS 60.0%
ACCGTCCTCCTCGCCAAGAA+TGG + chr6_1:83054155-83054174 Msa0895340:CDS 60.0%
GGAACATGTTGCGCACAGGG+TGG + chr6_1:83054459-83054478 Msa0895340:CDS 60.0%
GGGTTGAAAGGGGTAGAGGG+AGG + chr6_1:83054584-83054603 Msa0895340:CDS 60.0%
GAAAGGGGTAGAGGGAGGAG+TGG + chr6_1:83054589-83054608 Msa0895340:CDS 60.0%
! GGAGTGGGAATATGGTGGGG+AGG + chr6_1:83054605-83054624 Msa0895340:CDS 60.0%
GGGTTTAACTGGCGGTGTCC+TGG + chr6_1:83054847-83054866 Msa0895340:CDS 60.0%
TTGCACGGAGGACATGGACC+CGG - chr6_1:83055075-83055094 None:intergenic 60.0%
GGGGCAAATGCTTTGCACGG+AGG - chr6_1:83055087-83055106 None:intergenic 60.0%
! CCACAAGGGCACAAACGAGG+AGG - chr6_1:83055108-83055127 None:intergenic 60.0%
CCTCCTCGTTTGTGCCCTTG+TGG + chr6_1:83055105-83055124 Msa0895340:CDS 60.0%
CGGCAGTCGGATCTTACCTG+CGG + chr6_1:83055159-83055178 Msa0895340:CDS 60.0%
!! CTTATCACAGCGCTGACCGC+AGG - chr6_1:83055178-83055197 None:intergenic 60.0%
!! GAGGGAGGCATTGTACCGCA+AGG - chr6_1:83055983-83056002 None:intergenic 60.0%
CATGGAAGCTGACACGAGGG+AGG - chr6_1:83055998-83056017 None:intergenic 60.0%
CACGGCTGAGGAACCGAACA+TGG - chr6_1:83056016-83056035 None:intergenic 60.0%
TGTTCGGTTCCTCAGCCGTG+TGG + chr6_1:83056016-83056035 Msa0895340:three_prime_UTR 60.0%
!! GACACAGGCACCGAACAAGG+AGG - chr6_1:83056079-83056098 None:intergenic 60.0%
GCGCCATGTGGACAGACTTG+TGG + chr6_1:83056271-83056290 Msa0895340:three_prime_UTR 60.0%
ATATGCCGGCAGCCACTCCT+TGG - chr6_1:83056301-83056320 None:intergenic 60.0%
TTGCAGTGAACGCTGCTGGC+TGG + chr6_1:83056848-83056867 Msa0895340:three_prime_UTR 60.0%
! TGCAGTGAACGCTGCTGGCT+GGG + chr6_1:83056849-83056868 Msa0895340:three_prime_UTR 60.0%
AAGACCCCAGCTCGTGTGCT+TGG + chr6_1:83056913-83056932 Msa0895340:three_prime_UTR 60.0%
CGCGGGTCCATGTCAACCAA+GGG - chr6_1:83056988-83057007 None:intergenic 60.0%
CCTTGGTTGACATGGACCCG+CGG + chr6_1:83056986-83057005 Msa0895340:three_prime_UTR 60.0%
TCAGCGTCCCTTGGCAAGTC+TGG - chr6_1:83057027-83057046 None:intergenic 60.0%
CCTCATCGCAGTTGCAGCTC+GGG - chr6_1:83057139-83057158 None:intergenic 60.0%
GAGCTGCAACTGCGATGAGG+AGG + chr6_1:83057139-83057158 Msa0895340:three_prime_UTR 60.0%
TGGGGAGGAACGAAAGAGGG+AGG + chr6_1:83057246-83057265 Msa0895340:three_prime_UTR 60.0%
GGAGGAACGAAAGAGGGAGG+AGG + chr6_1:83057249-83057268 Msa0895340:three_prime_UTR 60.0%
AAGGTGGAGCCTTCTGCAGG+TGG + chr6_1:83057540-83057559 Msa0895340:three_prime_UTR 60.0%
CCATTTGCGCCACCTGCAGA+AGG - chr6_1:83057552-83057571 None:intergenic 60.0%
CCTTCTGCAGGTGGCGCAAA+TGG + chr6_1:83057549-83057568 Msa0895340:three_prime_UTR 60.0%
TCTGCAGGTGGCGCAAATGG+AGG + chr6_1:83057552-83057571 Msa0895340:three_prime_UTR 60.0%
GGCGAGGAGGACGGTGTGAA+GGG - chr6_1:83054150-83054169 None:intergenic 65.0%
TGGCGAGGAGGACGGTGTGA+AGG - chr6_1:83054151-83054170 None:intergenic 65.0%
!! GGTGGTGGATGTGGTGGAGG+CGG - chr6_1:83054209-83054228 None:intergenic 65.0%
!! AGTTGTGGTGGTGGTGGCGG+CGG - chr6_1:83054251-83054270 None:intergenic 65.0%
ACGGAGGACATGGACCCGGA+TGG - chr6_1:83055071-83055090 None:intergenic 65.0%
GTACCGCAAGGTAGGGGAGG+AGG - chr6_1:83055971-83055990 None:intergenic 65.0%
CCTGAATGGCCACACGGCTG+AGG - chr6_1:83056028-83056047 None:intergenic 65.0%
CCTCAGCCGTGTGGCCATTC+AGG + chr6_1:83056025-83056044 Msa0895340:three_prime_UTR 65.0%
GTGCTCCAAGGAGTGGCTGC+CGG + chr6_1:83056293-83056312 Msa0895340:three_prime_UTR 65.0%
CCGCGGGTCCATGTCAACCA+AGG - chr6_1:83056989-83057008 None:intergenic 65.0%
ATCGCAGTTGCAGCTCGGGC+AGG - chr6_1:83057135-83057154 None:intergenic 65.0%
CCCGAGCTGCAACTGCGATG+AGG + chr6_1:83057136-83057155 Msa0895340:three_prime_UTR 65.0%
AAGGCAGCGGTTCTCGACCC+AGG + chr6_1:83057303-83057322 Msa0895340:three_prime_UTR 65.0%
CAGCGGTTCTCGACCCAGGT+TGG + chr6_1:83057307-83057326 Msa0895340:three_prime_UTR 65.0%
!! GGCGGTGGTGGATGTGGTGG+AGG - chr6_1:83054212-83054231 None:intergenic 70.0%
!! GGTGGCGGTGGTGGATGTGG+TGG - chr6_1:83054215-83054234 None:intergenic 70.0%
!! GGCGGTGGCGGTGGTGGATG+TGG - chr6_1:83054218-83054237 None:intergenic 75.0%
!! TGTGGTGGTGGTGGCGGCGG+CGG - chr6_1:83054248-83054267 None:intergenic 75.0%
!! GGTGGAGGCGGTGGCGGTGG+TGG - chr6_1:83054224-83054243 None:intergenic 80.0%
!!! GGTGGTGGAGGCGGTGGCGG+TGG - chr6_1:83054227-83054246 None:intergenic 80.0%
!!! GGCGGTGGTGGAGGCGGTGG+CGG - chr6_1:83054230-83054249 None:intergenic 80.0%
!!! GGCGGCGGTGGTGGAGGCGG+TGG - chr6_1:83054233-83054252 None:intergenic 85.0%
!!! GGCGGCGGCGGTGGTGGAGG+CGG - chr6_1:83054236-83054255 None:intergenic 85.0%
!! GGTGGCGGCGGCGGTGGTGG+AGG - chr6_1:83054239-83054258 None:intergenic 85.0%
!!! GGTGGTGGCGGCGGCGGTGG+TGG - chr6_1:83054242-83054261 None:intergenic 85.0%
!!! GGTGGTGGTGGCGGCGGCGG+TGG - chr6_1:83054245-83054264 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 83052791 83057894 83052791 ID=Msa0895340;Name=Msa0895340
chr6_1 mRNA 83052791 83057894 83052791 ID=Msa0895340-mRNA-1;Parent=Msa0895340;Name=Msa0895340-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|0|0.5|2|2259|568
chr6_1 exon 83052791 83052949 83052791 ID=Msa0895340-mRNA-1:exon:14002;Parent=Msa0895340-mRNA-1
chr6_1 exon 83054088 83057894 83054088 ID=Msa0895340-mRNA-1:exon:14003;Parent=Msa0895340-mRNA-1
chr6_1 CDS 83052791 83052949 83052791 ID=Msa0895340-mRNA-1:cds;Parent=Msa0895340-mRNA-1
chr6_1 CDS 83054088 83055635 83054088 ID=Msa0895340-mRNA-1:cds;Parent=Msa0895340-mRNA-1
chr6_1 three_prime_UTR 83055636 83057894 83055636 ID=Msa0895340-mRNA-1:three_prime_utr;Parent=Msa0895340-mRNA-1
Gene Sequence

>Msa0895340

AACTCTTGTGACACAAACATAAAGGAACAGAAACTCATAAACACAAAACAAAAAAACAAATCTCAGAAAAAAAATTCAGATACAGAAACTTCAACAACAAACGAAGAAGAAGCATTTCCAAACTGCTTGTTTCTCAATTCTCTTCCTCTTCTCGTCAAGAAGGGACATTGGAGCATGAGCTTGCAACAAAGACGAGAAAGGAGGGAAGGGTCGAGGTTCCCTTCACACCGTCCTCCTCGCCAAGAATGGATTCCGAAAGGCGCTGGAGCATCTAGCTCCGCCTCCACCACATCCACCACCGCCACCGCCTCCACCACCGCCGCCGCCACCACCACCACAACTGTTGACCAACCTACAAGTTTGCACTCTCATGAGAAGAATACTAATAATGATGGTGGTTCATCCAATCAAGGAGCTGTTGCTCCAACATTTGCTAGGCATAGAAGTAATCACCATGTTGCTCATAGGGTGGAAAGGGAACATGTTGCTCATAGGATGGACAGGAATCATGTTTCTCAGAGGGTGGAGAGGGAACATGTTGCGCACAGGGTGGAGAGAGAACATGCTGCTCATCGAGTTGAAAGGGAACATGTTGCTCAGAGGGTGGAGAGGGAACATGTTGCTCATCGTGTGGAGAGGGAACATGTTGCTCATAGGGTTGAAAGGGGTAGAGGGAGGAGTGGGAATATGGTGGGGAGGCAATATGGACCAAGGGACTCTAGCTTGCCTCAATTAGTGCAGGAGATTCAGGAGAAGCTCACGAAAGGTACTGTGGAGTGCATGATTTGTTATGATATGGTTCGTAGGTCTGCGCCTATCTGGTCTTGCTCCAGTTGCTACTCTATCTTTCATCTGAATTGCATCAAGAAGTGGGCTCGTGCACCCACCTCAGTTGATTTATCGGCGGAGAAGAATCTAGGGTTTAACTGGCGGTGTCCTGGTTGTCAGTCTGTGCAACATACGTCTTCAAAGGATATTAAGTATGTTTGCTTTTGTGGGAAGAGGGTTGACCCTCCGTCTGATTTGTATTTAACACCTCATTCGTGTGGCGAACCATGCGGGAAGCCTCTTGAAAAGGAGGTGTTTGTTACTGAAGAGAGAAAGGACGAGCTTTGCCCTCATGCTTGTGTCTTGCAATGCCATCCGGGTCCATGTCCTCCGTGCAAAGCATTTGCCCCTCCTCGTTTGTGCCCTTGTGGGAAGAAAAGAATTGCTACTCGCTGTTCTGATCGGCAGTCGGATCTTACCTGCGGTCAGCGCTGTGATAAGCTTCTTGATTGTGGACGTCATCGTTGTGAAAATGCATGCCATGTGGGTCCTTGTGATCCTTGTCAGGTGCTAATTGAGGCCTCTTGCTTTTGCAGTAAAATGACACAGGTTATTTTTTGTGGGGAGATGGCTATGAAAGGTGAATTTGAAGCAGAAGGGGAGTTTTTTCTTGTGGTTCCAATTGTGGAAATGTGCTTGGCTGCAGTAATCATATCTGTCGTGAGGTTTGTCATCCGGGAAGCTGCGGTGAATGTGAATTTTTACCAAGTCGGGTCAAGACATGCTGTTGTGGGAAAACAAAGTTGGAGGATGAACGCAAGAGTTGTGTGGATCCAATTCCTACCTGCTCAAAAGTATGCAGCAAGACCCTTCGTTGTGGGGTACATGCTTGTAAGGAGACGTGCCATGTCGGGGAATGTCCACCATGTAAGGTCCTAA
Protein sequence

>Msa0895340

NSCDTNIKEQKLINTKQKNKSQKKNSDTETSTTNEEEAFPNCLFLNSLPLLVKKGHWSMSLQQRRERREGSRFPSHRPPRQEWIPKGAGASSSASTTSTTATASTTAAATTTTTVDQPTSLHSHEKNTNNDGGSSNQGAVAPTFARHRSNHHVAHRVEREHVAHRMDRNHVSQRVEREHVAHRVEREHAAHRVEREHVAQRVEREHVAHRVEREHVAHRVERGRGRSGNMVGRQYGPRDSSLPQLVQEIQEKLTKGTVECMICYDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTSVDLSAEKNLGFNWRCPGCQSVQHTSSKDIKYVCFCGKRVDPPSDLYLTPHSCGEPCGKPLEKEVFVTEERKDELCPHACVLQCHPGPCPPCKAFAPPRLCPCGKKRIATRCSDRQSDLTCGQRCDKLLDCGRHRCENACHVGPCDPCQVLIEASCFCSKMTQVIFCGEMAMKGEFEAEGEFFLVVPIVEMCLAAVIISVVRFVIREAAVNVNFYQVGSRHAVVGKQSWRMNARVVWIQFLPAQKYAARPFVVGYMLVRRRAMSGNVHHVRS*