AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0898740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0898740 MtrunA17_Chr6g0484441 96.951 328 7 1 1 328 1 325 0.0 663
Msa0898740 MtrunA17_Chr4g0060931 66.332 199 54 4 4 198 16 205 8.85e-89 270
Msa0898740 MtrunA17_Chr3g0091921 57.384 237 88 4 5 229 16 251 1.28e-88 268
Msa0898740 MtrunA17_Chr3g0139331 71.429 175 38 2 2 174 8 172 7.80e-87 265
Msa0898740 MtrunA17_Chr1g0147421 76.730 159 34 2 2 157 24 182 4.22e-85 260
Msa0898740 MtrunA17_Chr2g0316971 75.796 157 32 3 2 152 20 176 5.17e-83 256
Msa0898740 MtrunA17_Chr6g0453451 70.701 157 42 1 5 157 20 176 1.57e-81 250
Msa0898740 MtrunA17_Chr7g0253011 67.665 167 46 3 4 162 16 182 1.78e-77 242
Msa0898740 MtrunA17_Chr7g0217721 63.473 167 44 2 8 157 22 188 5.23e-70 221
Msa0898740 MtrunA17_Chr6g0461661 63.095 168 53 4 4 164 17 182 6.51e-70 222
Msa0898740 MtrunA17_Chr2g0312321 44.106 263 134 6 1 258 7 261 1.23e-68 216
Msa0898740 MtrunA17_Chr3g0144271 61.143 175 57 5 2 170 20 189 1.40e-65 212
Msa0898740 MtrunA17_Chr7g0217711 71.654 127 36 0 5 131 19 145 2.18e-64 201
Msa0898740 MtrunA17_Chr4g0018391 50.785 191 88 2 5 192 7 194 1.78e-62 202
Msa0898740 MtrunA17_Chr4g0056541 53.801 171 73 2 4 171 6 173 8.64e-61 198
Msa0898740 MtrunA17_Chr5g0398971 53.488 172 70 4 4 170 6 172 9.48e-60 195
Msa0898740 MtrunA17_Chr7g0252971 55.422 166 59 3 2 152 5 170 1.11e-59 194
Msa0898740 MtrunA17_Chr8g0359921 57.595 158 63 2 4 157 13 170 1.14e-59 194
Msa0898740 MtrunA17_Chr2g0318081 56.051 157 67 1 4 158 15 171 1.40e-59 195
Msa0898740 MtrunA17_Chr4g0042561 45.714 210 102 2 5 208 9 212 3.08e-59 191
Msa0898740 MtrunA17_Chr2g0318101 40.072 277 133 7 2 253 12 280 4.31e-59 193
Msa0898740 MtrunA17_Chr5g0405211 50.602 166 79 1 1 163 4 169 8.38e-59 192
Msa0898740 MtrunA17_Chr2g0309331 40.244 246 123 3 2 243 7 232 1.16e-58 192
Msa0898740 MtrunA17_Chr4g0017921 60.000 150 56 2 5 151 8 156 1.40e-58 192
Msa0898740 MtrunA17_Chr2g0309891 57.143 154 61 2 5 153 6 159 2.04e-58 191
Msa0898740 MtrunA17_Chr3g0124761 55.280 161 66 2 2 157 4 163 9.52e-58 188
Msa0898740 MtrunA17_Chr1g0183741 56.291 151 62 2 4 152 9 157 1.05e-57 187
Msa0898740 MtrunA17_Chr4g0047841 50.532 188 66 4 5 165 15 202 1.34e-57 189
Msa0898740 MtrunA17_Chr1g0200561 50.932 161 76 1 1 158 15 175 1.39e-57 189
Msa0898740 MtrunA17_Chr6g0481091 48.500 200 93 5 4 197 5 200 2.54e-57 185
Msa0898740 MtrunA17_Chr8g0372121 50.943 159 75 1 1 156 2 160 3.04e-57 187
Msa0898740 MtrunA17_Chr5g0417791 53.165 158 68 1 5 156 3 160 4.26e-57 185
Msa0898740 MtrunA17_Chr5g0433781 58.553 152 59 2 5 152 6 157 1.20e-56 194
Msa0898740 MtrunA17_Chr7g0263931 55.063 158 63 2 2 151 8 165 2.01e-56 186
Msa0898740 MtrunA17_Chr3g0109821 58.170 153 59 2 5 152 6 158 4.29e-56 193
Msa0898740 MtrunA17_Chr7g0261411 56.081 148 61 2 5 150 10 155 6.07e-56 183
Msa0898740 MtrunA17_Chr8g0346001 51.220 164 66 2 2 151 12 175 5.61e-55 185
Msa0898740 MtrunA17_Chr8g0384721 51.429 175 71 4 5 168 7 178 1.32e-54 180
Msa0898740 MtrunA17_Chr3g0130731 54.601 163 64 3 2 157 4 163 6.69e-54 178
Msa0898740 MtrunA17_Chr2g0326361 52.500 160 68 2 5 156 14 173 2.31e-52 175
Msa0898740 MtrunA17_Chr7g0214071 51.266 158 72 2 2 157 12 166 2.47e-51 170
Msa0898740 MtrunA17_Chr3g0092671 54.140 157 64 4 7 157 7 161 3.28e-49 172
Msa0898740 MtrunA17_Chr8g0361731 45.882 170 79 3 1 157 10 179 6.33e-49 168
Msa0898740 MtrunA17_Chr6g0453131 37.050 278 150 7 3 258 13 287 7.38e-49 168
Msa0898740 MtrunA17_Chr5g0400461 49.682 157 69 3 4 151 5 160 1.11e-48 166
Msa0898740 MtrunA17_Chr5g0417001 46.154 169 79 3 1 157 10 178 1.85e-48 167
Msa0898740 MtrunA17_Chr1g0197361 52.258 155 70 3 7 157 10 164 2.93e-48 170
Msa0898740 MtrunA17_Chr5g0428991 52.318 151 68 2 5 151 25 175 2.41e-47 168
Msa0898740 MtrunA17_Chr3g0130101 51.678 149 68 2 7 151 9 157 3.66e-47 162
Msa0898740 MtrunA17_Chr4g0076731 48.077 156 74 2 7 158 56 208 4.21e-47 164
Msa0898740 MtrunA17_Chr3g0128151 52.318 151 68 2 5 151 22 172 4.88e-47 167
Msa0898740 MtrunA17_Chr3g0128111 50.676 148 69 2 8 151 45 192 5.83e-47 159
Msa0898740 MtrunA17_Chr4g0054791 43.429 175 86 4 4 168 5 176 1.61e-45 157
Msa0898740 MtrunA17_Chr8g0364791 48.344 151 74 2 5 151 6 156 7.60e-45 158
Msa0898740 MtrunA17_Chr3g0113001 58.462 130 49 2 54 178 14 143 1.61e-44 154
Msa0898740 MtrunA17_Chr1g0197351 50.633 158 68 2 4 151 41 198 4.68e-44 157
Msa0898740 MtrunA17_Chr1g0201021 48.667 150 73 2 7 152 21 170 2.95e-43 156
Msa0898740 MtrunA17_Chr8g0384201 47.020 151 76 2 5 151 6 156 8.50e-43 154
Msa0898740 MtrunA17_Chr2g0311651 36.596 235 124 6 2 216 18 247 1.31e-42 149
Msa0898740 MtrunA17_Chr4g0038751 42.073 164 89 2 7 167 17 177 5.31e-42 147
Msa0898740 MtrunA17_Chr2g0311661 42.286 175 82 4 2 157 17 191 6.65e-42 147
Msa0898740 MtrunA17_Chr5g0442771 41.860 172 82 3 2 157 15 184 9.24e-42 147
Msa0898740 MtrunA17_Chr8g0385991 43.137 153 76 3 5 148 14 164 7.34e-39 137
Msa0898740 MtrunA17_Chr3g0131911 41.975 162 80 3 5 154 14 173 2.22e-37 134
Msa0898740 MtrunA17_Chr3g0113031 55.462 119 47 2 66 178 1 119 3.10e-36 131
Msa0898740 MtrunA17_Chr8g0345671 46.667 150 71 5 4 148 10 155 3.30e-36 134
Msa0898740 MtrunA17_Chr4g0026141 40.719 167 88 6 1 156 1 167 4.62e-34 125
Msa0898740 MtrunA17_Chr8g0345691 44.371 151 75 6 3 148 10 156 3.83e-33 126
Msa0898740 MtrunA17_Chr2g0321741 47.826 115 54 2 35 148 22 131 8.97e-33 124
Msa0898740 MtrunA17_Chr2g0321631 39.130 161 86 6 6 154 5 165 2.15e-30 115
Msa0898740 MtrunA17_Chr4g0050701 33.854 192 106 4 5 186 11 191 4.68e-30 113
Msa0898740 MtrunA17_Chr7g0266701 39.024 164 86 6 3 152 2 165 5.18e-30 114
Msa0898740 MtrunA17_Chr8g0345701 40.994 161 68 7 4 145 6 158 1.01e-28 109
Msa0898740 MtrunA17_Chr8g0345711 42.857 133 70 4 1 128 8 139 1.04e-28 108
Msa0898740 MtrunA17_Chr8g0345731 40.260 154 80 6 5 151 24 172 3.27e-26 102
Msa0898740 MtrunA17_Chr8g0384351 41.060 151 63 6 5 151 10 138 3.81e-25 100
Msa0898740 MtrunA17_Chr8g0345721 34.132 167 70 5 1 128 26 191 1.90e-23 96.3
Msa0898740 MtrunA17_Chr7g0243371 51.899 79 36 1 58 134 17 95 2.90e-22 90.1
Msa0898740 MtrunA17_Chr8g0345741 39.831 118 65 5 16 128 2 118 8.92e-21 87.4
Msa0898740 MtrunA17_Chr3g0130321 35.802 162 80 6 5 150 7 160 2.90e-19 84.7
Msa0898740 MtrunA17_Chr3g0113011 67.347 49 16 0 5 53 19 67 1.93e-18 78.6
Msa0898740 MtrunA17_Chr7g0251661 33.077 130 81 4 2 128 7 133 1.13e-17 79.0
Msa0898740 MtrunA17_Chr3g0113041 68.889 45 14 0 9 53 23 67 3.12e-17 75.1
Msa0898740 MtrunA17_Chr4g0046431 30.366 191 110 6 5 179 68 251 2.44e-15 75.5
Msa0898740 MtrunA17_Chr7g0251651 29.412 153 102 5 5 154 18 167 2.44e-15 73.6
Msa0898740 MtrunA17_Chr2g0282871 32.317 164 92 6 5 152 53 213 3.90e-15 74.7
Msa0898740 MtrunA17_Chr7g0251671 29.710 138 91 4 1 135 6 140 1.67e-14 70.5
Msa0898740 MtrunA17_Chr5g0422431 30.168 179 107 6 5 168 58 233 3.66e-14 72.8
Msa0898740 MtrunA17_Chr8g0389661 30.270 185 95 8 5 164 47 222 7.02e-13 69.3
Msa0898740 MtrunA17_Chr1g0198751 28.889 180 108 8 5 168 58 233 8.84e-13 68.9
Msa0898740 MtrunA17_Chr2g0324961 33.793 145 75 5 4 130 48 189 2.59e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0898740 AT3G18400.1 58.407 339 105 12 1 328 1 314 1.00e-118 345
Msa0898740 AT5G61430.1 75.316 158 35 2 4 157 15 172 4.37e-85 260
Msa0898740 AT5G53950.1 76.433 157 31 3 3 153 15 171 7.73e-84 258
Msa0898740 AT2G24430.2 75.472 159 36 2 2 157 13 171 1.40e-83 255
Msa0898740 AT2G24430.1 75.472 159 36 2 2 157 13 171 1.40e-83 255
Msa0898740 AT5G07680.2 72.152 158 40 2 4 157 2 159 1.93e-82 253
Msa0898740 AT5G07680.1 72.152 158 40 2 4 157 16 173 2.71e-82 253
Msa0898740 AT5G39610.1 73.418 158 38 1 4 157 19 176 5.24e-82 250
Msa0898740 AT5G18270.2 72.549 153 37 2 4 151 20 172 7.48e-80 246
Msa0898740 AT5G18270.1 71.895 153 38 2 4 151 20 172 2.49e-79 245
Msa0898740 AT3G04060.1 70.968 155 40 2 4 153 19 173 2.23e-77 240
Msa0898740 AT1G76420.1 69.620 158 45 2 2 156 19 176 3.11e-76 237
Msa0898740 AT3G29035.1 71.523 151 39 1 4 150 23 173 1.84e-75 235
Msa0898740 AT3G15170.1 57.282 206 79 5 2 201 17 219 2.69e-73 229
Msa0898740 AT1G56010.2 59.236 157 58 2 1 151 15 171 7.85e-65 207
Msa0898740 AT3G12977.1 59.740 154 59 2 1 151 14 167 2.06e-64 205
Msa0898740 AT4G27410.2 42.797 236 122 4 4 237 13 237 3.05e-62 200
Msa0898740 AT1G71930.2 50.932 161 76 1 1 158 5 165 2.66e-60 196
Msa0898740 AT1G71930.1 50.932 161 76 1 1 158 5 165 2.66e-60 196
Msa0898740 AT3G04070.2 46.256 227 90 7 4 205 9 228 4.24e-60 196
Msa0898740 AT3G10500.1 58.861 158 61 2 4 157 8 165 1.51e-59 200
Msa0898740 AT5G62380.2 56.129 155 65 1 4 155 6 160 2.97e-59 194
Msa0898740 AT5G62380.1 56.129 155 65 1 4 155 6 160 2.97e-59 194
Msa0898740 AT1G33280.1 51.613 186 74 3 5 175 8 192 5.12e-59 192
Msa0898740 AT4G27410.3 40.316 253 121 5 4 237 13 254 8.17e-59 192
Msa0898740 AT3G04070.1 43.388 242 89 6 5 205 10 244 9.98e-59 193
Msa0898740 AT1G12260.2 54.194 155 68 1 4 155 6 160 1.32e-58 192
Msa0898740 AT1G12260.1 54.545 154 67 1 5 155 7 160 1.48e-58 194
Msa0898740 AT4G10350.1 59.211 152 57 2 5 151 9 160 1.99e-58 192
Msa0898740 AT3G15500.1 55.769 156 67 1 4 157 13 168 7.92e-58 189
Msa0898740 AT5G04410.1 56.962 158 64 2 4 157 8 165 8.81e-58 196
Msa0898740 AT3G03200.1 56.250 160 65 2 5 159 6 165 1.45e-57 193
Msa0898740 AT1G01720.1 45.022 231 95 6 5 206 7 234 2.01e-57 187
Msa0898740 AT1G52890.1 56.129 155 66 1 5 157 14 168 2.29e-57 188
Msa0898740 AT2G18060.3 53.247 154 69 1 4 154 8 161 4.18e-57 189
Msa0898740 AT2G18060.1 53.247 154 69 1 4 154 8 161 4.18e-57 189
Msa0898740 AT1G62700.1 54.545 154 67 1 5 155 7 160 5.42e-57 189
Msa0898740 AT1G62700.2 54.545 154 67 1 5 155 7 160 5.42e-57 189
Msa0898740 AT4G36160.1 50.932 161 76 1 4 161 9 169 1.47e-56 188
Msa0898740 AT4G36160.3 50.932 161 76 1 4 161 9 169 1.47e-56 188
Msa0898740 AT4G36160.2 50.932 161 76 1 4 161 13 173 1.60e-56 188
Msa0898740 AT5G17260.1 55.280 161 67 2 4 159 5 165 2.21e-56 190
Msa0898740 AT1G65910.1 54.375 160 69 2 5 160 6 165 2.79e-56 193
Msa0898740 AT3G17730.1 55.921 152 63 2 4 151 5 156 4.62e-56 182
Msa0898740 AT5G66300.1 51.852 162 72 3 4 159 11 172 1.44e-55 183
Msa0898740 AT5G61430.2 76.852 108 21 2 54 157 2 109 1.62e-55 182
Msa0898740 AT5G08790.1 46.119 219 90 7 2 203 4 211 2.20e-55 182
Msa0898740 AT1G69490.1 48.901 182 85 2 5 178 9 190 5.08e-55 181
Msa0898740 AT2G46770.1 50.595 168 65 4 2 151 13 180 1.26e-54 182
Msa0898740 AT1G61110.1 51.190 168 67 2 4 156 15 182 1.56e-54 181
Msa0898740 AT3G61910.1 49.405 168 67 2 2 151 8 175 1.86e-54 181
Msa0898740 AT4G28530.1 53.614 166 57 3 5 152 10 173 2.34e-53 179
Msa0898740 AT1G33060.2 52.500 160 72 2 3 158 22 181 4.62e-53 184
Msa0898740 AT1G33060.1 52.500 160 72 2 3 158 22 181 5.17e-53 184
Msa0898740 AT1G77450.1 52.532 158 69 2 5 157 10 166 9.46e-53 174
Msa0898740 AT5G63790.1 48.619 181 81 3 2 173 47 224 1.06e-52 176
Msa0898740 AT5G63790.2 48.619 181 81 3 2 173 57 234 1.21e-52 176
Msa0898740 AT1G79580.3 54.305 151 64 3 5 151 17 166 1.40e-52 177
Msa0898740 AT1G79580.5 54.305 151 64 3 5 151 17 166 1.40e-52 177
Msa0898740 AT1G79580.4 54.305 151 64 3 5 151 17 166 1.40e-52 177
Msa0898740 AT1G79580.2 54.305 151 64 3 5 151 17 166 1.40e-52 177
Msa0898740 AT1G79580.1 54.305 151 64 3 5 151 17 166 1.40e-52 177
Msa0898740 AT3G15510.1 52.147 163 63 3 9 156 21 183 1.81e-52 177
Msa0898740 AT4G35580.1 46.226 212 95 7 3 200 7 213 1.84e-52 181
Msa0898740 AT4G35580.2 46.226 212 95 7 3 200 7 213 2.70e-52 181
Msa0898740 AT4G35580.3 46.226 212 95 7 3 200 7 213 2.71e-52 181
Msa0898740 AT1G54330.1 53.205 156 70 2 4 157 5 159 2.75e-52 174
Msa0898740 AT2G33480.2 53.333 150 67 1 5 154 15 161 1.10e-51 172
Msa0898740 AT5G46590.1 52.941 153 66 3 5 151 6 158 1.46e-51 172
Msa0898740 AT1G32770.1 48.485 165 70 2 2 151 13 177 5.44e-51 173
Msa0898740 AT3G10490.1 52.941 153 67 2 4 151 26 178 1.12e-50 168
Msa0898740 AT2G33480.1 52.632 152 67 2 5 154 15 163 1.93e-50 169
Msa0898740 AT3G10480.1 54.248 153 65 2 4 151 26 178 5.97e-50 172
Msa0898740 AT5G46590.2 57.364 129 52 2 5 130 6 134 7.23e-50 167
Msa0898740 AT3G10490.2 52.941 153 67 2 4 151 26 178 9.44e-50 172
Msa0898740 AT5G13180.1 50.641 156 71 3 5 157 14 166 1.31e-49 166
Msa0898740 AT4G17980.1 52.258 155 66 4 5 151 6 160 2.72e-49 166
Msa0898740 AT4G17980.2 52.258 155 66 4 5 151 6 160 4.53e-49 166
Msa0898740 AT3G10480.2 54.248 153 64 3 4 151 26 177 1.03e-48 169
Msa0898740 AT1G52880.1 52.795 161 62 3 9 155 21 181 2.74e-47 162
Msa0898740 AT1G26870.1 43.979 191 90 5 1 174 12 202 3.48e-47 164
Msa0898740 AT5G39820.1 42.632 190 82 4 7 169 22 211 6.17e-47 162
Msa0898740 AT2G02450.1 49.315 146 73 1 7 151 53 198 1.18e-46 162
Msa0898740 AT2G02450.2 49.315 146 73 1 7 151 53 198 1.44e-46 162
Msa0898740 AT2G43000.1 45.161 155 82 1 7 158 20 174 2.85e-46 158
Msa0898740 AT5G64060.1 46.711 152 77 2 4 151 5 156 1.87e-45 158
Msa0898740 AT1G34180.3 46.452 155 79 2 7 157 18 172 4.82e-45 159
Msa0898740 AT5G09330.5 49.007 151 73 2 5 151 6 156 9.66e-45 159
Msa0898740 AT5G09330.2 49.007 151 73 2 5 151 6 156 9.66e-45 159
Msa0898740 AT5G09330.4 49.007 151 73 2 5 151 6 156 9.66e-45 159
Msa0898740 AT5G09330.3 49.007 151 73 2 5 151 6 156 9.66e-45 159
Msa0898740 AT5G09330.1 49.007 151 73 2 5 151 6 156 9.66e-45 159
Msa0898740 AT1G34190.1 46.452 155 79 2 7 157 18 172 1.39e-44 160
Msa0898740 AT1G56010.1 64.078 103 32 1 54 151 2 104 2.17e-44 153
Msa0898740 AT3G10480.3 44.624 186 65 2 4 151 26 211 2.27e-44 159
Msa0898740 AT1G34180.1 46.452 155 79 2 7 157 18 172 2.44e-44 160
Msa0898740 AT5G24590.2 42.077 183 98 4 4 178 12 194 5.50e-44 157
Msa0898740 AT3G49530.2 38.605 215 111 5 3 212 11 209 1.56e-43 154
Msa0898740 AT3G49530.1 38.605 215 111 5 3 212 11 209 6.23e-43 154
Msa0898740 AT1G34180.4 43.114 167 79 2 7 157 18 184 6.81e-43 154
Msa0898740 AT2G17040.1 39.572 187 100 4 7 183 8 191 9.40e-43 149
Msa0898740 AT1G34180.2 43.114 167 79 2 7 157 18 184 3.32e-42 154
Msa0898740 AT2G27300.1 48.276 145 69 2 5 148 14 153 3.46e-42 149
Msa0898740 AT1G32510.1 45.455 165 78 3 5 157 6 170 4.66e-42 147
Msa0898740 AT3G12977.2 64.356 101 33 2 54 151 14 114 1.69e-41 144
Msa0898740 AT3G12910.1 42.941 170 77 5 7 157 23 191 5.74e-40 142
Msa0898740 AT1G32870.2 49.057 159 73 3 5 157 10 166 9.62e-40 146
Msa0898740 AT1G32870.1 49.057 159 73 3 5 157 10 166 1.10e-39 146
Msa0898740 AT1G32870.3 49.057 159 73 3 5 157 46 202 2.39e-39 146
Msa0898740 AT3G44290.2 42.767 159 80 3 7 159 16 169 3.31e-39 138
Msa0898740 AT5G22290.1 32.432 259 145 6 7 239 23 277 3.80e-39 141
Msa0898740 AT3G44290.1 42.767 159 80 3 7 159 16 169 1.09e-38 140
Msa0898740 AT4G10350.2 61.000 100 37 1 54 151 14 113 2.84e-36 132
Msa0898740 AT5G04395.1 45.517 145 63 2 2 130 25 169 4.28e-36 129
Msa0898740 AT4G28530.2 50.781 128 45 2 5 114 10 137 9.66e-33 124
Msa0898740 AT2G33480.3 55.556 99 42 1 58 154 8 106 8.41e-31 116
Msa0898740 AT1G02230.1 37.915 211 116 8 6 207 4 208 3.24e-29 115
Msa0898740 AT3G44350.2 37.576 165 94 5 1 156 1 165 1.70e-28 110
Msa0898740 AT3G04420.2 39.474 152 81 4 6 151 4 150 2.30e-28 111
Msa0898740 AT5G64530.1 34.884 172 82 4 4 157 2 161 3.35e-28 108
Msa0898740 AT3G04420.1 39.474 152 81 4 6 151 4 150 8.93e-28 111
Msa0898740 AT4G01520.1 39.873 158 85 6 6 156 5 159 2.47e-27 109
Msa0898740 AT4G01540.4 36.612 183 103 7 8 183 7 183 2.82e-26 107
Msa0898740 AT5G64530.2 41.221 131 63 3 4 132 2 120 3.26e-26 102
Msa0898740 AT4G01540.3 36.612 183 103 7 8 183 7 183 4.09e-26 107
Msa0898740 AT4G01540.2 36.612 183 103 7 8 183 7 183 4.09e-26 107
Msa0898740 AT4G01540.1 36.612 183 103 7 8 183 7 183 5.27e-26 108
Msa0898740 AT5G22380.1 36.527 167 95 5 1 156 1 167 7.07e-26 103
Msa0898740 AT3G44350.1 40.741 135 74 4 1 129 1 135 1.31e-25 100
Msa0898740 AT4G01550.1 38.667 150 83 5 8 151 7 153 5.10e-24 102
Msa0898740 AT3G10490.4 59.740 77 28 1 78 151 2 78 6.63e-24 100
Msa0898740 AT3G10490.3 59.740 77 28 1 78 151 2 78 6.63e-24 100
Msa0898740 AT2G18060.2 54.167 72 33 0 83 154 2 73 2.57e-23 97.8
Msa0898740 AT1G02250.1 41.538 130 66 4 6 128 4 130 8.49e-23 97.8
Msa0898740 AT1G02220.1 40.945 127 68 3 6 128 4 127 9.82e-23 98.2
Msa0898740 AT1G01010.1 38.037 163 76 8 1 148 1 153 3.74e-22 96.7
Msa0898740 AT5G14000.1 34.161 161 101 3 4 162 14 171 2.60e-20 87.8
Msa0898740 AT2G43000.2 40.625 96 54 1 66 158 1 96 4.87e-20 87.0
Msa0898740 AT5G14000.2 36.434 129 78 2 4 130 14 140 2.05e-18 81.3
Msa0898740 AT3G56530.1 30.405 148 100 2 5 149 52 199 8.14e-18 83.2
Msa0898740 AT5G50820.1 36.090 133 69 5 4 130 16 138 2.58e-17 79.3
Msa0898740 AT5G22290.2 40.230 87 43 2 84 165 2 84 1.25e-15 75.5
Msa0898740 AT3G55210.1 30.357 168 97 7 5 156 11 174 9.43e-15 73.9
Msa0898740 AT3G04430.1 35.878 131 70 5 11 128 6 135 1.43e-13 68.9
Msa0898740 AT5G14490.4 26.210 248 150 8 5 223 55 298 2.57e-13 70.5
Msa0898740 AT5G14490.1 26.210 248 150 8 5 223 58 301 2.63e-13 70.5
Msa0898740 AT5G14490.3 26.210 248 150 8 5 223 58 301 3.12e-13 70.1
Msa0898740 AT1G25580.1 32.353 170 91 8 4 160 57 215 3.77e-13 70.5
Msa0898740 AT4G29230.1 31.892 185 93 8 5 164 48 224 4.16e-13 70.5
Msa0898740 AT4G29230.2 31.892 185 93 8 5 164 47 223 4.19e-13 70.1
Msa0898740 AT4G29230.3 31.892 185 93 8 5 164 48 224 4.66e-13 70.1
Msa0898740 AT5G14490.2 29.121 182 105 6 4 168 54 228 5.86e-13 68.6
Msa0898740 AT1G28470.1 31.148 183 97 8 4 167 76 248 5.88e-13 68.9

Find 68 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTACTGAAATATTATT+TGG 0.156112 6_1:+93259225 None:intergenic
ACAAGAGCAACCATTCAATT+TGG 0.264812 6_1:-93259007 Msa0898740:CDS
ACCTCAATAGTGAATGAATT+TGG 0.270479 6_1:-93259441 Msa0898740:CDS
ACCAATCGAGCCACTGAATC+AGG 0.295623 6_1:-93260502 Msa0898740:CDS
CATTCAATTTGGACTCCATT+TGG 0.322744 6_1:-93258996 Msa0898740:CDS
GTTGTGTCACATGGAGATTC+TGG 0.325153 6_1:+93259462 None:intergenic
GTTGAGCTTCCAAATCTAAA+TGG 0.329477 6_1:-93259414 Msa0898740:CDS
CAAGGGGTGAGAAAAGTAAT+TGG 0.333069 6_1:-93260384 Msa0898740:CDS
TGTGAACCTTGGGACCTTCC+AGG 0.334984 6_1:-93261488 Msa0898740:intron
AGGATGAATGGGTGGTTTGT+AGG 0.337985 6_1:-93259539 Msa0898740:CDS
ACATGAATTTGACAATGAAT+TGG 0.349230 6_1:-93259299 Msa0898740:CDS
TTTGTAATACCATTTAGATT+TGG 0.362526 6_1:+93259405 None:intergenic
AATATTTCGTGGTGGAGTTT+TGG 0.365969 6_1:-93260449 Msa0898740:CDS
TTTGGATTAAGCAAGTTAGA+AGG 0.390098 6_1:+93259243 None:intergenic
GGATGAATGGGTGGTTTGTA+GGG 0.397208 6_1:-93259538 Msa0898740:CDS
ATCAACAACTGCAACAGCTT+TGG 0.405014 6_1:+93261520 None:intergenic
ACCAAATTCATTCACTATTG+AGG 0.421602 6_1:+93259440 None:intergenic
CCCTGATTCAGTGGCTCGAT+TGG 0.425214 6_1:+93260501 None:intergenic
TCATACAGGTAAGGCTTCAA+TGG 0.427731 6_1:-93260584 Msa0898740:intron
TTCTAAAAGCATTACAACTT+AGG 0.444682 6_1:-93259197 Msa0898740:CDS
ACTCCTTGTTGAGGCATGTA+TGG 0.449948 6_1:+93259126 None:intergenic
CTTTAAACAACTTCACCAAA+TGG 0.452085 6_1:+93258981 None:intergenic
CATACAGGTAAGGCTTCAAT+GGG 0.463734 6_1:-93260583 Msa0898740:intron
GAGCCACTGAATCAGGGTAT+TGG 0.473159 6_1:-93260495 Msa0898740:CDS
AGAGATAGAAAATATCCAAC+TGG 0.474047 6_1:-93260532 Msa0898740:CDS
TACTTAGATCAGTTCCAAGT+TGG 0.477373 6_1:+93259091 None:intergenic
TTAGATCAGTTCCAAGTTGG+TGG 0.487706 6_1:+93259094 None:intergenic
TTATAAGGGTAGGGCTCCAA+GGG 0.492314 6_1:-93260401 Msa0898740:CDS
GTGATGAGTTCTTCATCTGT+TGG 0.493082 6_1:+93261584 None:intergenic
CAAATGGAGTCCAAATTGAA+TGG 0.497221 6_1:+93258997 None:intergenic
TCTCAACAAGTGTGAACCTT+GGG 0.498360 6_1:-93261498 Msa0898740:CDS
GGATTCACCAACATTATTCA+AGG 0.498909 6_1:-93259366 Msa0898740:CDS
CCCTACCCTTATAAAACACT+AGG 0.512291 6_1:+93260410 None:intergenic
AAGGGGTGAGAAAAGTAATT+GGG 0.515394 6_1:-93260383 Msa0898740:CDS
GAAAACCACTGGAAAAGATA+AGG 0.516873 6_1:-93260473 Msa0898740:CDS
TTTATAAGGGTAGGGCTCCA+AGG 0.519624 6_1:-93260402 Msa0898740:CDS
GGTTGCTCTTGTTGATGCTG+TGG 0.527873 6_1:+93259018 None:intergenic
GTAATATCTCACCACCAACT+TGG 0.532120 6_1:-93259105 Msa0898740:CDS
TCAGGGTATTGGAAAACCAC+TGG 0.536184 6_1:-93260484 Msa0898740:CDS
ACTATTGAGGTTGTGTCACA+TGG 0.536553 6_1:+93259453 None:intergenic
TTTCCAATACCCTGATTCAG+TGG 0.541052 6_1:+93260492 None:intergenic
TGCAACAGCTTTGGATGTGA+AGG 0.542646 6_1:+93261529 None:intergenic
ATGGAGGAAAATCTACCTCC+TGG 0.544862 6_1:-93261620 Msa0898740:CDS
AAAGATAAGGAAATATTTCG+TGG 0.545961 6_1:-93260460 Msa0898740:CDS
TTAGAAGGCCATGGTAGAGA+TGG 0.548422 6_1:+93259258 None:intergenic
TGTTTGTCCTTGAATAATGT+TGG 0.550492 6_1:+93259359 None:intergenic
TTACCTTTGAAGTTCGAAAG+TGG 0.550555 6_1:+93260329 None:intergenic
TGGGAAAATGATGTTTGTTG+TGG 0.550859 6_1:+93259486 None:intergenic
ACACCACTTTCGAACTTCAA+AGG 0.552288 6_1:-93260332 Msa0898740:intron
GTCACATGGAGATTCTGGTT+GGG 0.559177 6_1:+93259467 None:intergenic
CGATTGGTTCTAAGTCCAGT+TGG 0.570705 6_1:+93260517 None:intergenic
ATCTCAACAAGTGTGAACCT+TGG 0.575709 6_1:-93261499 Msa0898740:CDS
GATGGAACATGACTTGAAGA+TGG 0.579781 6_1:+93259276 None:intergenic
AAATAACCTGGAAGGTCCCA+AGG 0.580335 6_1:+93261482 None:intergenic
TGTCACATGGAGATTCTGGT+TGG 0.585895 6_1:+93259466 None:intergenic
CCTACCCTTATAAAACACTA+GGG 0.590419 6_1:+93260411 None:intergenic
TTAAGCAAGTTAGAAGGCCA+TGG 0.601623 6_1:+93259249 None:intergenic
ACAAATTCATCATCTTCATG+TGG 0.605409 6_1:-93259387 Msa0898740:CDS
TGAGATATTACTCCTTGTTG+AGG 0.611365 6_1:+93259117 None:intergenic
CCAATCGAGCCACTGAATCA+GGG 0.616010 6_1:-93260501 Msa0898740:CDS
GCACCATACATGCCTCAACA+AGG 0.631430 6_1:-93259129 Msa0898740:CDS
TACAGGTAAGGCTTCAATGG+GGG 0.647295 6_1:-93260581 Msa0898740:intron
GTCATGTTCCATCTCTACCA+TGG 0.649805 6_1:-93259266 Msa0898740:CDS
GATAAGGAAATATTTCGTGG+TGG 0.655075 6_1:-93260457 Msa0898740:CDS
GTTGGATGAAACCTAAAACC+AGG 0.669523 6_1:+93261602 None:intergenic
TATAAGGGTAGGGCTCCAAG+GGG 0.710910 6_1:-93260400 Msa0898740:CDS
GGATGAAACCTAAAACCAGG+AGG 0.726374 6_1:+93261605 None:intergenic
ATACAGGTAAGGCTTCAATG+GGG 0.739241 6_1:-93260582 Msa0898740:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATTTTATTTTTCTTTG+AGG - chr6_1:93259573-93259592 Msa0898740:intron 10.0%
!!! TAGTAATCATATAATTTTTA+TGG + chr6_1:93260519-93260538 None:intergenic 10.0%
!!! GATGCAATTTTTTTTTTTTT+TGG - chr6_1:93259299-93259318 Msa0898740:CDS 15.0%
!!! TTTTGGAAATTATTATTAGA+AGG - chr6_1:93259316-93259335 Msa0898740:CDS 15.0%
!!! TATTTTGAAAATTAGTTACA+TGG + chr6_1:93259778-93259797 None:intergenic 15.0%
!! CACAAATTCAAAATATATTA+TGG - chr6_1:93259805-93259824 Msa0898740:intron 15.0%
!! CTAAGAAAATATTAAAACAT+GGG + chr6_1:93260341-93260360 None:intergenic 15.0%
!! ACTAAGAAAATATTAAAACA+TGG + chr6_1:93260342-93260361 None:intergenic 15.0%
!!! TTAGTATAGTATTATTTTGT+TGG - chr6_1:93260403-93260422 Msa0898740:CDS 15.0%
!!! ATTTTTATGGAAAGTTTTTA+AGG + chr6_1:93260506-93260525 None:intergenic 15.0%
!! AAACTATTTACTTATTAACA+AGG + chr6_1:93260893-93260912 None:intergenic 15.0%
!! GAATTTACTGAAATATTATT+TGG + chr6_1:93261391-93261410 None:intergenic 15.0%
!! ATATAGACAAATTAAGAGAA+AGG + chr6_1:93259458-93259477 None:intergenic 20.0%
!!! AGCTTTTGTATATATTGATT+TGG - chr6_1:93259607-93259626 Msa0898740:intron 20.0%
!!! GCTTTTGTATATATTGATTT+GGG - chr6_1:93259608-93259627 Msa0898740:intron 20.0%
!!! GTTATTTTCAAAGTAAGAAT+GGG + chr6_1:93259746-93259765 None:intergenic 20.0%
!!! CAACTCTTTAAAAAAATCAA+TGG - chr6_1:93259833-93259852 Msa0898740:intron 20.0%
!! TAACAAAAGTTGACATTAAT+TGG - chr6_1:93259869-93259888 Msa0898740:intron 20.0%
!! AATAATTAATCATGTTTGTG+TGG - chr6_1:93259998-93260017 Msa0898740:intron 20.0%
!!! AACTCATTTTAGTTTTTACA+AGG - chr6_1:93260369-93260388 Msa0898740:CDS 20.0%
!! AAAATACTAGATTTCATATG+TGG - chr6_1:93261023-93261042 Msa0898740:intron 20.0%
!! TTTGTAATACCATTTAGATT+TGG + chr6_1:93261211-93261230 None:intergenic 20.0%
! AGATATGAACAAAAATAACC+TGG + chr6_1:93259146-93259165 None:intergenic 25.0%
!! TGTTTGATTGTAGATTTTCA+AGG - chr6_1:93259243-93259262 Msa0898740:CDS 25.0%
! TCGACTAAACTTAATTTAGA+AGG - chr6_1:93259277-93259296 Msa0898740:CDS 25.0%
!!! GGTTATTTTCAAAGTAAGAA+TGG + chr6_1:93259747-93259766 None:intergenic 25.0%
! AAAGATAAGGAAATATTTCG+TGG - chr6_1:93260153-93260172 Msa0898740:intron 25.0%
!! AAAACCCTAGTGTTTTATAA+GGG - chr6_1:93260198-93260217 Msa0898740:intron 25.0%
!!! GTATAGTATTATTTTGTTGG+TGG - chr6_1:93260406-93260425 Msa0898740:CDS 25.0%
!!! TTATGGAAAGTTTTTAAGGA+TGG + chr6_1:93260502-93260521 None:intergenic 25.0%
! AAAAAAGTTACGAGACTTTA+TGG - chr6_1:93260633-93260652 Msa0898740:intron 25.0%
!!! GAGTATTTTGATTACTATGT+TGG - chr6_1:93260804-93260823 Msa0898740:intron 25.0%
!!! TTAATAGTCGATTTTCTCTT+TGG - chr6_1:93260958-93260977 Msa0898740:intron 25.0%
!! TAACATTTTGCAATTTTTGC+AGG - chr6_1:93261054-93261073 Msa0898740:intron 25.0%
! ACATGAATTTGACAATGAAT+TGG - chr6_1:93261314-93261333 Msa0898740:intron 25.0%
!!! TTCTAAAAGCATTACAACTT+AGG - chr6_1:93261416-93261435 Msa0898740:intron 25.0%
ATGAACAAAAATAACCTGGA+AGG + chr6_1:93259142-93259161 None:intergenic 30.0%
ACCAATAATCAACAAAGTCT+TGG - chr6_1:93259673-93259692 Msa0898740:intron 30.0%
! ACCAAGACTTTGTTGATTAT+TGG + chr6_1:93259677-93259696 None:intergenic 30.0%
ATTAGTTACATGGTGTACTT+AGG + chr6_1:93259768-93259787 None:intergenic 30.0%
GTGTATAATTCATACAGGTA+AGG - chr6_1:93260020-93260039 Msa0898740:intron 30.0%
AGAGATAGAAAATATCCAAC+TGG - chr6_1:93260081-93260100 Msa0898740:intron 30.0%
! TATTTCCTTATCTTTTCCAG+TGG + chr6_1:93260148-93260167 None:intergenic 30.0%
! GAAAACCCTAGTGTTTTATA+AGG - chr6_1:93260197-93260216 Msa0898740:intron 30.0%
!! TAGTATTATTTTGTTGGTGG+TGG - chr6_1:93260409-93260428 Msa0898740:CDS 30.0%
!! AAGTTTTTAAGGATGGCTTA+TGG + chr6_1:93260495-93260514 None:intergenic 30.0%
! TTGTCTTGCATTTTCGAAAA+CGG + chr6_1:93260930-93260949 None:intergenic 30.0%
! TTTTTGTTGATACGCTCTTT+TGG + chr6_1:93261105-93261124 None:intergenic 30.0%
ACCTCAATAGTGAATGAATT+TGG - chr6_1:93261172-93261191 Msa0898740:intron 30.0%
ACCAAATTCATTCACTATTG+AGG + chr6_1:93261176-93261195 None:intergenic 30.0%
ACAAATTCATCATCTTCATG+TGG - chr6_1:93261226-93261245 Msa0898740:intron 30.0%
TGTTTGTCCTTGAATAATGT+TGG + chr6_1:93261257-93261276 None:intergenic 30.0%
TTTGGATTAAGCAAGTTAGA+AGG + chr6_1:93261373-93261392 None:intergenic 30.0%
!! AAAATCTACCTCCTGGTTTT+AGG - chr6_1:93259000-93259019 Msa0898740:CDS 35.0%
GTGTGGTGTATAATTCATAC+AGG - chr6_1:93260015-93260034 Msa0898740:intron 35.0%
GAAAACCACTGGAAAAGATA+AGG - chr6_1:93260140-93260159 Msa0898740:intron 35.0%
GATAAGGAAATATTTCGTGG+TGG - chr6_1:93260156-93260175 Msa0898740:intron 35.0%
!! AATATTTCGTGGTGGAGTTT+TGG - chr6_1:93260164-93260183 Msa0898740:intron 35.0%
CCTACCCTTATAAAACACTA+GGG + chr6_1:93260205-93260224 None:intergenic 35.0%
! CCTAGTGTTTTATAAGGGTA+GGG - chr6_1:93260203-93260222 Msa0898740:intron 35.0%
AAGGGGTGAGAAAAGTAATT+GGG - chr6_1:93260230-93260249 Msa0898740:intron 35.0%
!! TTACCTTTGAAGTTCGAAAG+TGG + chr6_1:93260287-93260306 None:intergenic 35.0%
TTTAAGGATGGCTTATGGTT+GGG + chr6_1:93260490-93260509 None:intergenic 35.0%
!! TTTTAAGGATGGCTTATGGT+TGG + chr6_1:93260491-93260510 None:intergenic 35.0%
! TGCAATTTTTGCAGGATGAA+TGG - chr6_1:93261062-93261081 Msa0898740:intron 35.0%
! GCAATTTTTGCAGGATGAAT+GGG - chr6_1:93261063-93261082 Msa0898740:intron 35.0%
! TGGGAAAATGATGTTTGTTG+TGG + chr6_1:93261130-93261149 None:intergenic 35.0%
GTTGAGCTTCCAAATCTAAA+TGG - chr6_1:93261199-93261218 Msa0898740:intron 35.0%
GGATTCACCAACATTATTCA+AGG - chr6_1:93261247-93261266 Msa0898740:intron 35.0%
TGAGATATTACTCCTTGTTG+AGG + chr6_1:93261499-93261518 None:intergenic 35.0%
TACTTAGATCAGTTCCAAGT+TGG + chr6_1:93261525-93261544 None:intergenic 35.0%
ACAAGAGCAACCATTCAATT+TGG - chr6_1:93261606-93261625 Msa0898740:CDS 35.0%
CAAATGGAGTCCAAATTGAA+TGG + chr6_1:93261619-93261638 None:intergenic 35.0%
CATTCAATTTGGACTCCATT+TGG - chr6_1:93261617-93261636 Msa0898740:CDS 35.0%
GTTGGATGAAACCTAAAACC+AGG + chr6_1:93259014-93259033 None:intergenic 40.0%
GTGATGAGTTCTTCATCTGT+TGG + chr6_1:93259032-93259051 None:intergenic 40.0%
ATCAACAACTGCAACAGCTT+TGG + chr6_1:93259096-93259115 None:intergenic 40.0%
ATCTCAACAAGTGTGAACCT+TGG - chr6_1:93259114-93259133 Msa0898740:CDS 40.0%
TCTCAACAAGTGTGAACCTT+GGG - chr6_1:93259115-93259134 Msa0898740:CDS 40.0%
TCATACAGGTAAGGCTTCAA+TGG - chr6_1:93260029-93260048 Msa0898740:intron 40.0%
CATACAGGTAAGGCTTCAAT+GGG - chr6_1:93260030-93260049 Msa0898740:intron 40.0%
ATACAGGTAAGGCTTCAATG+GGG - chr6_1:93260031-93260050 Msa0898740:intron 40.0%
TTTCCAATACCCTGATTCAG+TGG + chr6_1:93260124-93260143 None:intergenic 40.0%
! CCCTAGTGTTTTATAAGGGT+AGG - chr6_1:93260202-93260221 Msa0898740:intron 40.0%
CCCTACCCTTATAAAACACT+AGG + chr6_1:93260206-93260225 None:intergenic 40.0%
!! CAATTACTTTTCTCACCCCT+TGG + chr6_1:93260231-93260250 None:intergenic 40.0%
CAAGGGGTGAGAAAAGTAAT+TGG - chr6_1:93260229-93260248 Msa0898740:intron 40.0%
ACACCACTTTCGAACTTCAA+AGG - chr6_1:93260281-93260300 Msa0898740:intron 40.0%
ATCACTAAATCAGACGCTAG+AGG - chr6_1:93260776-93260795 Msa0898740:intron 40.0%
! ATTTTTGCAGGATGAATGGG+TGG - chr6_1:93261066-93261085 Msa0898740:intron 40.0%
ACTATTGAGGTTGTGTCACA+TGG + chr6_1:93261163-93261182 None:intergenic 40.0%
GATGGAACATGACTTGAAGA+TGG + chr6_1:93261340-93261359 None:intergenic 40.0%
TTAAGCAAGTTAGAAGGCCA+TGG + chr6_1:93261367-93261386 None:intergenic 40.0%
GTAATATCTCACCACCAACT+TGG - chr6_1:93261508-93261527 Msa0898740:CDS 40.0%
! TTAGATCAGTTCCAAGTTGG+TGG + chr6_1:93261522-93261541 None:intergenic 40.0%
ATGGAGGAAAATCTACCTCC+TGG - chr6_1:93258993-93259012 Msa0898740:CDS 45.0%
GGATGAAACCTAAAACCAGG+AGG + chr6_1:93259011-93259030 None:intergenic 45.0%
!! TGCAACAGCTTTGGATGTGA+AGG + chr6_1:93259087-93259106 None:intergenic 45.0%
AAATAACCTGGAAGGTCCCA+AGG + chr6_1:93259134-93259153 None:intergenic 45.0%
TACAGGTAAGGCTTCAATGG+GGG - chr6_1:93260032-93260051 Msa0898740:intron 45.0%
!! CGATTGGTTCTAAGTCCAGT+TGG + chr6_1:93260099-93260118 None:intergenic 45.0%
!! TCAGGGTATTGGAAAACCAC+TGG - chr6_1:93260129-93260148 Msa0898740:intron 45.0%
!! TTTCGTGGTGGAGTTTTGGT+AGG - chr6_1:93260168-93260187 Msa0898740:intron 45.0%
TTTATAAGGGTAGGGCTCCA+AGG - chr6_1:93260211-93260230 Msa0898740:intron 45.0%
TTATAAGGGTAGGGCTCCAA+GGG - chr6_1:93260212-93260231 Msa0898740:intron 45.0%
GATGGCTTATGGTTGGGTAA+AGG + chr6_1:93260484-93260503 None:intergenic 45.0%
! AGGATGAATGGGTGGTTTGT+AGG - chr6_1:93261074-93261093 Msa0898740:intron 45.0%
! GGATGAATGGGTGGTTTGTA+GGG - chr6_1:93261075-93261094 Msa0898740:intron 45.0%
! GTCACATGGAGATTCTGGTT+GGG + chr6_1:93261149-93261168 None:intergenic 45.0%
TGTCACATGGAGATTCTGGT+TGG + chr6_1:93261150-93261169 None:intergenic 45.0%
GTTGTGTCACATGGAGATTC+TGG + chr6_1:93261154-93261173 None:intergenic 45.0%
GTCATGTTCCATCTCTACCA+TGG - chr6_1:93261347-93261366 Msa0898740:intron 45.0%
TTAGAAGGCCATGGTAGAGA+TGG + chr6_1:93261358-93261377 None:intergenic 45.0%
ACTCCTTGTTGAGGCATGTA+TGG + chr6_1:93261490-93261509 None:intergenic 45.0%
!! ATATATATATAACAAAAAAA+GGG + chr6_1:93259187-93259206 None:intergenic 5.0%
!! TATATATATATAACAAAAAA+AGG + chr6_1:93259188-93259207 None:intergenic 5.0%
!!! AATATTATTAATTACTTTTT+TGG - chr6_1:93259414-93259433 Msa0898740:CDS 5.0%
!! TTTATATATAAGTTATTAAT+TGG + chr6_1:93259526-93259545 None:intergenic 5.0%
!!! ATATATAAGTTTTTTTTTTT+GGG + chr6_1:93259554-93259573 None:intergenic 5.0%
!!! TATATATAAGTTTTTTTTTT+TGG + chr6_1:93259555-93259574 None:intergenic 5.0%
!! AAAACTATAAAAATTAATTA+TGG + chr6_1:93260564-93260583 None:intergenic 5.0%
!!! TAACATTATTTTTTTTAAAA+TGG - chr6_1:93260994-93261013 Msa0898740:intron 5.0%
TAAGGCTTCAATGGGGGAGA+AGG - chr6_1:93260038-93260057 Msa0898740:intron 50.0%
CTTCAATGGGGGAGAAGGAA+TGG - chr6_1:93260043-93260062 Msa0898740:intron 50.0%
ACCAATCGAGCCACTGAATC+AGG - chr6_1:93260111-93260130 Msa0898740:intron 50.0%
CCAATCGAGCCACTGAATCA+GGG - chr6_1:93260112-93260131 Msa0898740:intron 50.0%
GAGCCACTGAATCAGGGTAT+TGG - chr6_1:93260118-93260137 Msa0898740:intron 50.0%
TATAAGGGTAGGGCTCCAAG+GGG - chr6_1:93260213-93260232 Msa0898740:intron 50.0%
GCACCATACATGCCTCAACA+AGG - chr6_1:93261484-93261503 Msa0898740:intron 50.0%
GGTTGCTCTTGTTGATGCTG+TGG + chr6_1:93261598-93261617 None:intergenic 50.0%
TGTGAACCTTGGGACCTTCC+AGG - chr6_1:93259125-93259144 Msa0898740:CDS 55.0%
CCCTGATTCAGTGGCTCGAT+TGG + chr6_1:93260115-93260134 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 93258993 93261642 93258993 ID=Msa0898740;Name=Msa0898740
chr6_1 mRNA 93258993 93261642 93258993 ID=Msa0898740-mRNA-1;Parent=Msa0898740;Name=Msa0898740-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.5|0|1|1|1|3|0|328
chr6_1 exon 93261489 93261642 93261489 ID=Msa0898740-mRNA-1:exon:15795;Parent=Msa0898740-mRNA-1
chr6_1 exon 93260333 93260598 93260333 ID=Msa0898740-mRNA-1:exon:15794;Parent=Msa0898740-mRNA-1
chr6_1 exon 93258993 93259559 93258993 ID=Msa0898740-mRNA-1:exon:15793;Parent=Msa0898740-mRNA-1
chr6_1 CDS 93261489 93261642 93261489 ID=Msa0898740-mRNA-1:cds;Parent=Msa0898740-mRNA-1
chr6_1 CDS 93260333 93260598 93260333 ID=Msa0898740-mRNA-1:cds;Parent=Msa0898740-mRNA-1
chr6_1 CDS 93258993 93259559 93258993 ID=Msa0898740-mRNA-1:cds;Parent=Msa0898740-mRNA-1
Gene Sequence

>Msa0898740

ATGGAGGAAAATCTACCTCCTGGTTTTAGGTTTCATCCAACAGATGAAGAACTCATCACACACTATCTTACAATGAAAATTTCTGATACTTCCTTCACATCCAAAGCTGTTGCAGTTGTTGATCTCAACAAGTGTGAACCTTGGGACCTTCCAGGTAAGGCTTCAATGGGGGAGAAGGAATGGTATTTTTTCAGTGTGAGAGATAGAAAATATCCAACTGGACTTAGAACCAATCGAGCCACTGAATCAGGGTATTGGAAAACCACTGGAAAAGATAAGGAAATATTTCGTGGTGGAGTTTTGGTAGGAATGAAGAAAACCCTAGTGTTTTATAAGGGTAGGGCTCCAAGGGGTGAGAAAAGTAATTGGGTCATGCATGAATATAGACTAGAAAACAAACACCACTTTCGAACTTCAAAGGATGAATGGGTGGTTTGTAGGGTTTTCCAAAAGAGCGTATCAACAAAAAAACCACAACAAACATCATTTTCCCAACCAGAATCTCCATGTGACACAACCTCAATAGTGAATGAATTTGGTGATGTTGAGCTTCCAAATCTAAATGGTATTACAAATTCATCATCTTCATGTGGATTCACCAACATTATTCAAGGACAAACATTCAACACTCATGATGATCTCAATAATGTTAACACAAACATGAATTTGACAATGAATTGGCCATCTTCAAGTCATGTTCCATCTCTACCATGGCCTTCTAACTTGCTTAATCCAAATAATATTTCAGTAAATTCATTACTTCTAAAAGCATTACAACTTAGGAATTATCAACATCAAAGAGAAGTTGCAGCTACAAATACTCATTTTGCACCATACATGCCTCAACAAGGAGTAATATCTCACCACCAACTTGGAACTGATCTAAGTAATAATTCAAATGATCTAAGTGCTTCTTCTTCAAAAGTTTTAGAGTGTATGCCACAGCATCAACAAGAGCAACCATTCAATTTGGACTCCATTTGGTGA
Protein sequence

>Msa0898740

MEENLPPGFRFHPTDEELITHYLTMKISDTSFTSKAVAVVDLNKCEPWDLPGKASMGEKEWYFFSVRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKHHFRTSKDEWVVCRVFQKSVSTKKPQQTSFSQPESPCDTTSIVNEFGDVELPNLNGITNSSSSCGFTNIIQGQTFNTHDDLNNVNTNMNLTMNWPSSSHVPSLPWPSNLLNPNNISVNSLLLKALQLRNYQHQREVAATNTHFAPYMPQQGVISHHQLGTDLSNNSNDLSASSSKVLECMPQHQQEQPFNLDSIW*